Cow genome map

Conread name: rmga38_o5.y1

Conread position: 1-198
Cow position:
Alignm length: 201
Alignm identity: 147
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 153, 32

Conread position: 1-292
Cow position:
Alignm length: 297
Alignm identity: 212
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 159, 24

Conread position: 1-362
Cow position:
Alignm length: 371
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 43

Conread position: 1-364
Cow position:
Alignm length: 370
Alignm identity: 250
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 159, 32

Conread position: 1-364
Cow position:
Alignm length: 370
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 47

Conread position: 2-364
Cow position:
Alignm length: 377
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 39

Conread position: 3-155
Cow position:
Alignm length: 153
Alignm identity: 116
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 3-179
Cow position:
Alignm length: 180
Alignm identity: 131
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 151, 39

Conread position: 3-198
Cow position:
Alignm length: 199
Alignm identity: 141
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 156, 59

Conread position: 3-239
Cow position:
Alignm length: 243
Alignm identity: 171
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 60, 22

Conread position: 3-255
Cow position:
Alignm length: 256
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 38

Conread position: 3-272
Cow position:
Alignm length: 274
Alignm identity: 191
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 50, 30

Conread position: 3-345
Cow position:
Alignm length: 349
Alignm identity: 243
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 160, 38

Conread position: 3-345
Cow position:
Alignm length: 349
Alignm identity: 225
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 157, 30

Conread position: 3-356
Cow position:
Alignm length: 360
Alignm identity: 256
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 151, 30

Conread position: 3-356
Cow position:
Alignm length: 364
Alignm identity: 251
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 114, 37

Conread position: 3-361
Cow position:
Alignm length: 365
Alignm identity: 256
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 157, 37

Conread position: 3-363
Cow position:
Alignm length: 380
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 22

Conread position: 3-364
Cow position:
Alignm length: 366
Alignm identity: 251
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 157, 38

Conread position: 3-364
Cow position:
Alignm length: 365
Alignm identity: 254
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 160, 38

Conread position: 3-364
Cow position:
Alignm length: 369
Alignm identity: 255
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 156, 32

Conread position: 3-364
Cow position:
Alignm length: 368
Alignm identity: 253
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 159, 29

Conread position: 3-364
Cow position:
Alignm length: 366
Alignm identity: 255
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 119, 38

Conread position: 5-349
Cow position:
Alignm length: 362
Alignm identity: 247
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 149, 7

Conread position: 5-357
Cow position:
Alignm length: 357
Alignm identity: 247
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 218, 42

Conread position: 6-271
Cow position:
Alignm length: 271
Alignm identity: 188
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 141, 37

Conread position: 6-361
Cow position:
Alignm length: 364
Alignm identity: 239
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 167, 35

Conread position: 12-364
Cow position:
Alignm length: 359
Alignm identity: 252
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 148, 21

Conread position: 12-364
Cow position:
Alignm length: 369
Alignm identity: 256
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 72, 29

Conread position: 14-284
Cow position:
Alignm length: 274
Alignm identity: 194
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 146, 10

Conread position: 16-304
Cow position:
Alignm length: 295
Alignm identity: 204
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 59, 25

Conread position: 21-364
Cow position:
Alignm length: 352
Alignm identity: 242
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 139, 9

Conread position: 24-335
Cow position:
Alignm length: 314
Alignm identity: 208
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 98, 18

Conread position: 30-364
Cow position:
Alignm length: 339
Alignm identity: 241
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 9, 31

Conread position: 31-356
Cow position:
Alignm length: 332
Alignm identity: 230
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 132, 43

Conread position: 34-364
Cow position:
Alignm length: 337
Alignm identity: 228
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 126, 40

Conread position: 36-294
Cow position:
Alignm length: 262
Alignm identity: 179
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 124, 38

Conread position: 36-348
Cow position:
Alignm length: 319
Alignm identity: 221
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 127, 38

Conread position: 36-364
Cow position:
Alignm length: 335
Alignm identity: 232
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 124, 24

Conread position: 36-364
Cow position:
Alignm length: 336
Alignm identity: 237
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 127, 38

Conread position: 36-364
Cow position:
Alignm length: 335
Alignm identity: 235
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 124, 38

Conread position: 36-364
Cow position:
Alignm length: 335
Alignm identity: 229
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 124, 38

Conread position: 36-364
Cow position:
Alignm length: 335
Alignm identity: 232
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 124, 38

Conread position: 36-364
Cow position:
Alignm length: 341
Alignm identity: 236
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 124, 40

Conread position: 36-364
Cow position:
Alignm length: 335
Alignm identity: 231
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 127, 38

Conread position: 36-364
Cow position:
Alignm length: 335
Alignm identity: 229
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 127, 38

Conread position: 37-352
Cow position:
Alignm length: 321
Alignm identity: 224
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 118, 24

Conread position: 37-356
Cow position:
Alignm length: 326
Alignm identity: 228
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 124, 39

Conread position: 38-364
Cow position:
Alignm length: 333
Alignm identity: 233
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 122, 39

Conread position: 58-364
Cow position:
Alignm length: 313
Alignm identity: 218
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 103, 12

Conread position: 62-364
Cow position:
Alignm length: 312
Alignm identity: 213
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 98, 64

Conread position: 66-329
Cow position:
Alignm length: 270
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 123

Conread position: 68-364
Cow position:
Alignm length: 306
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 15

Conread position: 68-364
Cow position:
Alignm length: 303
Alignm identity: 210
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 92, 125

Conread position: 70-270
Cow position:
Alignm length: 204
Alignm identity: 145
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 90, 118

Conread position: 70-273
Cow position:
Alignm length: 207
Alignm identity: 146
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 90, 123

Conread position: 70-303
Cow position:
Alignm length: 237
Alignm identity: 165
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 90, 62

Conread position: 70-318
Cow position:
Alignm length: 250
Alignm identity: 170
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 156, 25

Conread position: 70-328
Cow position:
Alignm length: 262
Alignm identity: 182
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 90, 18

Conread position: 70-356
Cow position:
Alignm length: 293
Alignm identity: 213
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 90, 123

Conread position: 70-356
Cow position:
Alignm length: 293
Alignm identity: 207
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 90, 52

Conread position: 70-361
Cow position:
Alignm length: 299
Alignm identity: 216
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 90, 120

Conread position: 70-364
Cow position:
Alignm length: 301
Alignm identity: 218
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 90, 123

Conread position: 70-364
Cow position:
Alignm length: 302
Alignm identity: 212
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 90, 14

Conread position: 70-364
Cow position:
Alignm length: 301
Alignm identity: 208
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 90, 123

Conread position: 70-364
Cow position:
Alignm length: 301
Alignm identity: 211
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 90, 120

Conread position: 70-364
Cow position:
Alignm length: 301
Alignm identity: 210
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 90, 123

Conread position: 70-364
Cow position:
Alignm length: 301
Alignm identity: 210
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 91, 123

Conread position: 70-364
Cow position:
Alignm length: 301
Alignm identity: 216
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 90, 66

Conread position: 70-364
Cow position:
Alignm length: 301
Alignm identity: 216
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 90, 66

Conread position: 70-364
Cow position:
Alignm length: 301
Alignm identity: 212
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 90, 120

Conread position: 70-364
Cow position:
Alignm length: 301
Alignm identity: 208
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 90, 123

Conread position: 70-364
Cow position:
Alignm length: 301
Alignm identity: 215
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 90, 120

Conread position: 70-364
Cow position:
Alignm length: 297
Alignm identity: 197
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 72, 94

Conread position: 70-364
Cow position:
Alignm length: 302
Alignm identity: 210
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 90, 120

Conread position: 70-364
Cow position:
Alignm length: 299
Alignm identity: 210
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 89, 128

Conread position: 70-364
Cow position:
Alignm length: 302
Alignm identity: 213
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 93, 123

Conread position: 70-364
Cow position:
Alignm length: 302
Alignm identity: 200
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 83, 49

Conread position: 70-364
Cow position:
Alignm length: 302
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 22

Conread position: 70-364
Cow position:
Alignm length: 301
Alignm identity: 217
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 90, 123

Conread position: 70-364
Cow position:
Alignm length: 298
Alignm identity: 212
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 84, 123

Conread position: 70-364
Cow position:
Alignm length: 303
Alignm identity: 211
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 90, 123

Conread position: 70-364
Cow position:
Alignm length: 301
Alignm identity: 211
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 93, 120

Conread position: 71-364
Cow position:
Alignm length: 310
Alignm identity: 217
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 89, 30

Conread position: 72-330
Cow position:
Alignm length: 264
Alignm identity: 189
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 10, 125

Conread position: 72-356
Cow position:
Alignm length: 292
Alignm identity: 204
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 88, 52

Conread position: 72-364
Cow position:
Alignm length: 299
Alignm identity: 210
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 91, 16

Conread position: 72-364
Cow position:
Alignm length: 299
Alignm identity: 208
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 89, 118

Conread position: 74-336
Cow position:
Alignm length: 266
Alignm identity: 181
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 118, 83

Conread position: 75-330
Cow position:
Alignm length: 259
Alignm identity: 179
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 85, 9

Conread position: 76-328
Cow position:
Alignm length: 260
Alignm identity: 175
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 59, 118

Conread position: 76-362
Cow position:
Alignm length: 294
Alignm identity: 196
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 84, 13

Conread position: 76-364
Cow position:
Alignm length: 300
Alignm identity: 196
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 33, 29

Conread position: 76-364
Cow position:
Alignm length: 295
Alignm identity: 204
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 87, 117

Conread position: 76-364
Cow position:
Alignm length: 303
Alignm identity: 205
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 71, 5

Conread position: 77-356
Cow position:
Alignm length: 285
Alignm identity: 197
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 84, 18

Conread position: 78-362
Cow position:
Alignm length: 292
Alignm identity: 196
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 76, 59

Conread position: 79-364
Cow position:
Alignm length: 293
Alignm identity: 213
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 84, 117

Conread position: 79-364
Cow position:
Alignm length: 292
Alignm identity: 211
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 81, 111

Conread position: 83-356
Cow position:
Alignm length: 281
Alignm identity: 202
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 77, 111

Conread position: 84-364
Cow position:
Alignm length: 288
Alignm identity: 192
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 16, 45

Conread position: 85-364
Cow position:
Alignm length: 283
Alignm identity: 183
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 61, 17

Conread position: 86-271
Cow position:
Alignm length: 189
Alignm identity: 144
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 68, 111

Conread position: 86-356
Cow position:
Alignm length: 277
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 117

Conread position: 88-364
Cow position:
Alignm length: 283
Alignm identity: 207
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 72, 105

Conread position: 89-352
Cow position:
Alignm length: 271
Alignm identity: 192
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 72, 99

Conread position: 90-364
Cow position:
Alignm length: 278
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 109

Conread position: 92-364
Cow position:
Alignm length: 280
Alignm identity: 201
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 68, 23

Conread position: 109-362
Cow position:
Alignm length: 260
Alignm identity: 178
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 51, 84

Conread position: 111-364
Cow position:
Alignm length: 257
Alignm identity: 188
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 49, 56

Conread position: 131-294
Cow position:
Alignm length: 167
Alignm identity: 124
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 32, 68

Conread position: 149-364
Cow position:
Alignm length: 220
Alignm identity: 151
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 25, 15

Conread position: 159-362
Cow position:
Alignm length: 208
Alignm identity: 154
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 64, 36

Conread position: 173-318
Cow position:
Alignm length: 147
Alignm identity: 111
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 92, 23

Conread position: 191-364
Cow position:
Alignm length: 178
Alignm identity: 133
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 26, 38

Conread position: 200-364
Cow position:
Alignm length: 170
Alignm identity: 124
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 26, 0

Conread position: 217-364
Cow position:
Alignm length: 152
Alignm identity: 113
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 6, 0

Conread position: 217-364
Cow position:
Alignm length: 152
Alignm identity: 117
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 9, 0

Conread position: 222-361
Cow position:
Alignm length: 143
Alignm identity: 108
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 112, 43

Show alignments to all cow chromosomes.