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Cow genome map

           
Conread name:
           
rmga38_o5.y1
        

               
Conread position:
               
1-352
               

               
Cow position:
               
chr4:56233482-56233150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
156, 32
               

               
Conread position:
               
1-356
               

               
Cow position:
               
chr4:27292164-27292499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
159, 40
               

               
Conread position:
               
3-133
               

               
Cow position:
               
chr4:52748665-52748801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
62, 38
               

               
Conread position:
               
3-184
               

               
Cow position:
               
chr4:32260054-32260228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
157, 30
               

               
Conread position:
               
3-191
               

               
Cow position:
               
chr4:48142573-48142392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
149, 30
               

               
Conread position:
               
3-203
               

               
Cow position:
               
chr4:19307048-19306856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
150, 37
               

               
Conread position:
               
3-264
               

               
Cow position:
               
chr4:33971103-33971346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
155, 30
               

               
Conread position:
               
3-272
               

               
Cow position:
               
chr4:45235067-45235332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
160, 38
               

               
Conread position:
               
3-277
               

               
Cow position:
               
chr4:15623633-15623372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
112, 30
               

               
Conread position:
               
3-280
               

               
Cow position:
               
chr4:2244193-2244463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
40, 7
               

               
Conread position:
               
3-281
               

               
Cow position:
               
chr4:51903395-51903133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
111, 30
               

               
Conread position:
               
3-283
               

               
Cow position:
               
chr4:27997478-27997213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
104, 38
               

               
Conread position:
               
3-284
               

               
Cow position:
               
chr4:56852690-56852428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
156, 38
               

               
Conread position:
               
3-300
               

               
Cow position:
               
chr4:43148196-43147915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
122, 37
               

               
Conread position:
               
3-301
               

               
Cow position:
               
chr4:20327922-20328201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
157, 37
               

               
Conread position:
               
3-310
               

               
Cow position:
               
chr4:19097084-19096800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
151, 42
               

               
Conread position:
               
3-310
               

               
Cow position:
               
chr4:37620095-37620390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
157, 38
               

               
Conread position:
               
3-330
               

               
Cow position:
               
chr4:43752970-43752644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
34, 58
               

               
Conread position:
               
3-333
               

               
Cow position:
               
chr4:53125930-53125611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
155, 29
               

               
Conread position:
               
3-336
               

               
Cow position:
               
chr4:12560829-12560500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
40, 134
               

               
Conread position:
               
3-350
               

               
Cow position:
               
chr4:30574249-30573917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 27
               

               
Conread position:
               
3-352
               

               
Cow position:
               
chr4:19256114-19255780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
157, 38
               

               
Conread position:
               
3-352
               

               
Cow position:
               
chr4:44449792-44450126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
37, 58
               

               
Conread position:
               
3-353
               

               
Cow position:
               
chr4:10992410-10992751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
227, 27
               

               
Conread position:
               
3-354
               

               
Cow position:
               
chr4:68362735-68362390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 72
               

               
Conread position:
               
3-356
               

               
Cow position:
               
chr4:42672964-42672624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 30
               

               
Conread position:
               
3-356
               

               
Cow position:
               
chr4:44839092-44839429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
153, 30
               

               
Conread position:
               
3-356
               

               
Cow position:
               
chr4:49794472-49794136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
151, 38
               

               
Conread position:
               
3-356
               

               
Cow position:
               
chr4:59118353-59118703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
312, 38
               

               
Conread position:
               
3-357
               

               
Cow position:
               
chr4:22073517-22073848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
324, 27
               

               
Conread position:
               
3-361
               

               
Cow position:
               
chr4:28377857-28378202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
160, 37
               

               
Conread position:
               
3-361
               

               
Cow position:
               
chr4:36893146-36892802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
151, 38
               

               
Conread position:
               
3-361
               

               
Cow position:
               
chr4:44684367-44684725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
81, 37
               

               
Conread position:
               
3-361
               

               
Cow position:
               
chr4:54494630-54494289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
157, 29
               

               
Conread position:
               
3-362
               

               
Cow position:
               
chr4:2121603-2121949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
152, 39
               

               
Conread position:
               
3-364
               

               
Cow position:
               
chr4:19541919-19541569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
157, 30
               

               
Conread position:
               
3-364
               

               
Cow position:
               
chr4:33433466-33433805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
154, 37
               

               
Conread position:
               
3-364
               

               
Cow position:
               
chr4:34043960-34044319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
81, 37
               

               
Conread position:
               
3-364
               

               
Cow position:
               
chr4:36815881-36815527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 29
               

               
Conread position:
               
3-364
               

               
Cow position:
               
chr4:37553251-37553598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
157, 38
               

               
Conread position:
               
3-364
               

               
Cow position:
               
chr4:44263269-44262924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
169, 39
               

               
Conread position:
               
4-318
               

               
Cow position:
               
chr4:17585226-17585530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
150, 37
               

               
Conread position:
               
4-356
               

               
Cow position:
               
chr4:2610028-2609693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 29
               

               
Conread position:
               
4-356
               

               
Cow position:
               
chr4:42480979-42480641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
147, 31
               

               
Conread position:
               
4-358
               

               
Cow position:
               
chr4:59333182-59333524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
150, 37
               

               
Conread position:
               
4-364
               

               
Cow position:
               
chr4:54146683-54147043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
46, 118
               

               
Conread position:
               
5-362
               

               
Cow position:
               
chr4:38309341-38309690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 37
               

               
Conread position:
               
5-364
               

               
Cow position:
               
chr4:28399617-28399958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
218, 14
               

               
Conread position:
               
6-330
               

               
Cow position:
               
chr4:3475421-3475098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
76, 42
               

               
Conread position:
               
6-361
               

               
Cow position:
               
chr4:39646500-39646145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 24
               

               
Conread position:
               
6-364
               

               
Cow position:
               
chr4:11201607-11201266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
148, 34
               

               
Conread position:
               
8-351
               

               
Cow position:
               
chr4:41975880-41976205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
152, 32
               

               
Conread position:
               
12-271
               

               
Cow position:
               
chr4:352012-351770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
148, 29
               

               
Conread position:
               
12-364
               

               
Cow position:
               
chr4:1435931-1436269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
148, 29
               

               
Conread position:
               
12-364
               

               
Cow position:
               
chr4:9649812-9649468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
148, 18
               

               
Conread position:
               
12-364
               

               
Cow position:
               
chr4:25972683-25972339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 20
               

               
Conread position:
               
18-356
               

               
Cow position:
               
chr4:37169035-37169360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
142, 7
               

               
Conread position:
               
22-364
               

               
Cow position:
               
chr4:21073391-21073730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
137, 21
               

               
Conread position:
               
30-361
               

               
Cow position:
               
chr4:2190574-2190891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
8, 48
               

               
Conread position:
               
31-330
               

               
Cow position:
               
chr4:29529093-29529379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
129, 39
               

               
Conread position:
               
31-352
               

               
Cow position:
               
chr4:49176211-49175903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
132, 30
               

               
Conread position:
               
31-359
               

               
Cow position:
               
chr4:59383740-59384055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
132, 43
               

               
Conread position:
               
34-361
               

               
Cow position:
               
chr4:26131880-26131565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
125, 40
               

               
Conread position:
               
36-330
               

               
Cow position:
               
chr4:21602724-21603003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
124, 38
               

               
Conread position:
               
36-345
               

               
Cow position:
               
chr4:19575247-19574950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
127, 27
               

               
Conread position:
               
36-352
               

               
Cow position:
               
chr4:5883195-5882891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
124, 38
               

               
Conread position:
               
36-355
               

               
Cow position:
               
chr4:48736598-48736292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
124, 38
               

               
Conread position:
               
36-356
               

               
Cow position:
               
chr4:1007610-1007301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
107, 38
               

               
Conread position:
               
36-356
               

               
Cow position:
               
chr4:44493822-44494130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
127, 36
               

               
Conread position:
               
36-364
               

               
Cow position:
               
chr4:3171031-3170722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
127, 38
               

               
Conread position:
               
36-364
               

               
Cow position:
               
chr4:27337930-27337614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
127, 34
               

               
Conread position:
               
36-364
               

               
Cow position:
               
chr4:47264497-47264181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
124, 38
               

               
Conread position:
               
36-364
               

               
Cow position:
               
chr4:65198081-65198397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
124, 38
               

               
Conread position:
               
37-364
               

               
Cow position:
               
chr4:8377419-8377736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
124, 39
               

               
Conread position:
               
37-364
               

               
Cow position:
               
chr4:16642533-16642219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
123, 37
               

               
Conread position:
               
37-364
               

               
Cow position:
               
chr4:36900092-36899780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
117, 37
               

               
Conread position:
               
39-271
               

               
Cow position:
               
chr4:27466456-27466237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
121, 22
               

               
Conread position:
               
53-299
               

               
Cow position:
               
chr4:22115337-22115107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
53-360
               

               
Cow position:
               
chr4:51014787-51014478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
59, 30
               

               
Conread position:
               
60-348
               

               
Cow position:
               
chr4:27185825-27186111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
50, 29
               

               
Conread position:
               
60-356
               

               
Cow position:
               
chr4:8704514-8704224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
99, 8
               

               
Conread position:
               
62-305
               

               
Cow position:
               
chr4:28094733-28094973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
98, 57
               

               
Conread position:
               
62-314
               

               
Cow position:
               
chr4:45114884-45115135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
14, 31
               

               
Conread position:
               
62-356
               

               
Cow position:
               
chr4:9482506-9482795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
107, 51
               

               
Conread position:
               
62-361
               

               
Cow position:
               
chr4:27287402-27287702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
97, 128
               

               
Conread position:
               
62-362
               

               
Cow position:
               
chr4:36755465-36755165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 18
               

               
Conread position:
               
62-363
               

               
Cow position:
               
chr4:7214070-7214392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
22, 112
               

               
Conread position:
               
62-364
               

               
Cow position:
               
chr4:7239103-7239409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
59, 131
               

               
Conread position:
               
63-347
               

               
Cow position:
               
chr4:36577851-36578130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
91, 127
               

               
Conread position:
               
64-364
               

               
Cow position:
               
chr4:24414993-24414691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 28
               

               
Conread position:
               
68-361
               

               
Cow position:
               
chr4:67651736-67652029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
47, 64
               

               
Conread position:
               
68-362
               

               
Cow position:
               
chr4:21364953-21364649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
156, 85
               

               
Conread position:
               
69-364
               

               
Cow position:
               
chr4:34644042-34644333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
91, 124
               

               
Conread position:
               
70-301
               

               
Cow position:
               
chr4:29072235-29072465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
93, 33
               

               
Conread position:
               
70-318
               

               
Cow position:
               
chr4:59643314-59643074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
90, 112
               

               
Conread position:
               
70-329
               

               
Cow position:
               
chr4:64061335-64061587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
83, 124
               

               
Conread position:
               
70-330
               

               
Cow position:
               
chr4:10420935-10420682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
90, 123
               

               
Conread position:
               
70-330
               

               
Cow position:
               
chr4:17067404-17067663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
90, 124
               

               
Conread position:
               
70-332
               

               
Cow position:
               
chr4:41640011-41639757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
90, 108
               

               
Conread position:
               
70-350
               

               
Cow position:
               
chr4:47502197-47501914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
109, 120
               

               
Conread position:
               
70-356
               

               
Cow position:
               
chr4:2263018-2263299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
90, 123
               

               
Conread position:
               
70-356
               

               
Cow position:
               
chr4:14352945-14353229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
90, 125
               

               
Conread position:
               
70-356
               

               
Cow position:
               
chr4:18602521-18602803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
90, 124
               

               
Conread position:
               
70-356
               

               
Cow position:
               
chr4:29312671-29312391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
93, 25
               

               
Conread position:
               
70-361
               

               
Cow position:
               
chr4:25595794-25596081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
90, 123
               

               
Conread position:
               
70-361
               

               
Cow position:
               
chr4:26399068-26398781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
93, 120
               

               
Conread position:
               
70-361
               

               
Cow position:
               
chr4:44051965-44051682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
90, 116
               

               
Conread position:
               
70-361
               

               
Cow position:
               
chr4:45105264-45105551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
90, 120
               

               
Conread position:
               
70-361
               

               
Cow position:
               
chr4:54812236-54811949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
93, 123
               

               
Conread position:
               
70-361
               

               
Cow position:
               
chr4:61242953-61242675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
262, 67
               

               
Conread position:
               
70-361
               

               
Cow position:
               
chr4:62014264-62014550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
93, 60
               

               
Conread position:
               
70-364
               

               
Cow position:
               
chr4:359577-359286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
25, 124
               

               
Conread position:
               
70-364
               

               
Cow position:
               
chr4:10044075-10044365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
90, 120
               

               
Conread position:
               
70-364
               

               
Cow position:
               
chr4:10136278-10135990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
90, 112
               

               
Conread position:
               
70-364
               

               
Cow position:
               
chr4:10425171-10424881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
96, 120
               

               
Conread position:
               
70-364
               

               
Cow position:
               
chr4:10553937-10553642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
90, 123
               

               
Conread position:
               
70-364
               

               
Cow position:
               
chr4:12018293-12018008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
90, 38
               

               
Conread position:
               
70-364
               

               
Cow position:
               
chr4:12237555-12237845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
89, 123
               

               
Conread position:
               
70-364
               

               
Cow position:
               
chr4:16365015-16364725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
90, 124
               

               
Conread position:
               
70-364
               

               
Cow position:
               
chr4:17822223-17821934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
90, 54
               

               
Conread position:
               
70-364
               

               
Cow position:
               
chr4:23303575-23303865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
90, 126
               

               
Conread position:
               
70-364
               

               
Cow position:
               
chr4:29896992-29897281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
79, 146
               

               
Conread position:
               
70-364
               

               
Cow position:
               
chr4:30475074-30474784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
260, 91
               

               
Conread position:
               
70-364
               

               
Cow position:
               
chr4:31955809-31956099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
90, 121
               

               
Conread position:
               
70-364
               

               
Cow position:
               
chr4:33366496-33366779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
93, 22
               

               
Conread position:
               
70-364
               

               
Cow position:
               
chr4:34713506-34713219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
90, 123
               

               
Conread position:
               
70-364
               

               
Cow position:
               
chr4:36025578-36025867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
90, 49
               

               
Conread position:
               
70-364
               

               
Cow position:
               
chr4:38584571-38584281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
89, 120
               

               
Conread position:
               
70-364
               

               
Cow position:
               
chr4:39422289-39421999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
71, 66
               

               
Conread position:
               
70-364
               

               
Cow position:
               
chr4:43315962-43316252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
90, 123
               

               
Conread position:
               
70-364
               

               
Cow position:
               
chr4:43895801-43896096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
47, 128
               

               
Conread position:
               
70-364
               

               
Cow position:
               
chr4:44777497-44777787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
90, 123
               

               
Conread position:
               
70-364
               

               
Cow position:
               
chr4:46743554-46743843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
90, 120
               

               
Conread position:
               
70-364
               

               
Cow position:
               
chr4:47020996-47020707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
90, 123
               

               
Conread position:
               
70-364
               

               
Cow position:
               
chr4:49745364-49745075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
90, 123
               

               
Conread position:
               
70-364
               

               
Cow position:
               
chr4:58292423-58292134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
90, 32
               

               
Conread position:
               
70-364
               

               
Cow position:
               
chr4:63194889-63195179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
90, 123
               

               
Conread position:
               
71-328
               

               
Cow position:
               
chr4:21832166-21832420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
82, 96
               

               
Conread position:
               
71-364
               

               
Cow position:
               
chr4:18547425-18547136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
89, 122
               

               
Conread position:
               
71-364
               

               
Cow position:
               
chr4:48733369-48733080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
89, 122
               

               
Conread position:
               
72-350
               

               
Cow position:
               
chr4:29035651-29035379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
88, 11
               

               
Conread position:
               
72-354
               

               
Cow position:
               
chr4:46710914-46711195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
88, 120
               

               
Conread position:
               
72-356
               

               
Cow position:
               
chr4:26874216-26874495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
88, 28
               

               
Conread position:
               
72-361
               

               
Cow position:
               
chr4:8558631-8558908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
88, 126
               

               
Conread position:
               
72-362
               

               
Cow position:
               
chr4:12670884-12670599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
101, 36
               

               
Conread position:
               
72-364
               

               
Cow position:
               
chr4:119999-120286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
88, 23
               

               
Conread position:
               
72-364
               

               
Cow position:
               
chr4:33069149-33069438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
10, 119
               

               
Conread position:
               
72-364
               

               
Cow position:
               
chr4:58833473-58833767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
88, 127
               

               
Conread position:
               
73-362
               

               
Cow position:
               
chr4:7329015-7329296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
87, 11
               

               
Conread position:
               
74-361
               

               
Cow position:
               
chr4:53055331-53055617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
11, 19
               

               
Conread position:
               
74-362
               

               
Cow position:
               
chr4:41602608-41602315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
87, 210
               

               
Conread position:
               
74-364
               

               
Cow position:
               
chr4:17877648-17877361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
86, 115
               

               
Conread position:
               
74-364
               

               
Cow position:
               
chr4:44645495-44645782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
86, 18
               

               
Conread position:
               
74-364
               

               
Cow position:
               
chr4:46708795-46709079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 114
               

               
Conread position:
               
76-332
               

               
Cow position:
               
chr4:58818573-58818827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
85, 118
               

               
Conread position:
               
76-356
               

               
Cow position:
               
chr4:12752508-12752233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
84, 96
               

               
Conread position:
               
76-356
               

               
Cow position:
               
chr4:28234481-28234757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
84, 117
               

               
Conread position:
               
76-361
               

               
Cow position:
               
chr4:12589278-12589000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
150, 114
               

               
Conread position:
               
76-361
               

               
Cow position:
               
chr4:17375728-17376001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
84, 106
               

               
Conread position:
               
76-361
               

               
Cow position:
               
chr4:65842024-65842312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
69, 22
               

               
Conread position:
               
76-364
               

               
Cow position:
               
chr4:2349062-2349348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
7, 119
               

               
Conread position:
               
76-364
               

               
Cow position:
               
chr4:10578846-10578559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
73, 16
               

               
Conread position:
               
77-332
               

               
Cow position:
               
chr4:60030475-60030223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
67, 6
               

               
Conread position:
               
77-360
               

               
Cow position:
               
chr4:36818166-36818449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
78, 108
               

               
Conread position:
               
77-364
               

               
Cow position:
               
chr4:46861847-46862137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 116
               

               
Conread position:
               
79-313
               

               
Cow position:
               
chr4:46083221-46083455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
78, 191
               

               
Conread position:
               
81-364
               

               
Cow position:
               
chr4:32250175-32249895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
79, 115
               

               
Conread position:
               
81-364
               

               
Cow position:
               
chr4:61673300-61673578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
79, 111
               

               
Conread position:
               
82-362
               

               
Cow position:
               
chr4:33357588-33357314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
11, 109
               

               
Conread position:
               
83-330
               

               
Cow position:
               
chr4:41469531-41469783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
60, 99
               

               
Conread position:
               
83-352
               

               
Cow position:
               
chr4:48797985-48798240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
253, 69
               

               
Conread position:
               
83-364
               

               
Cow position:
               
chr4:40576184-40576464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 9
               

               
Conread position:
               
84-364
               

               
Cow position:
               
chr4:66127583-66127865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
41, 35
               

               
Conread position:
               
86-364
               

               
Cow position:
               
chr4:32770234-32770501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
137, 57
               

               
Conread position:
               
86-364
               

               
Cow position:
               
chr4:36813110-36812833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
74, 142
               

               
Conread position:
               
86-364
               

               
Cow position:
               
chr4:57206288-57206008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
48, 76
               

               
Conread position:
               
86-364
               

               
Cow position:
               
chr4:58948232-58948527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
189, 101
               

               
Conread position:
               
88-313
               

               
Cow position:
               
chr4:33030225-33030011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
135, 57
               

               
Conread position:
               
88-361
               

               
Cow position:
               
chr4:2002919-2003193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
75, 101
               

               
Conread position:
               
89-325
               

               
Cow position:
               
chr4:10722051-10721820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
142, 106
               

               
Conread position:
               
89-330
               

               
Cow position:
               
chr4:44196406-44196175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
134, 72
               

               
Conread position:
               
89-360
               

               
Cow position:
               
chr4:30408039-30407768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
65, 83
               

               
Conread position:
               
90-352
               

               
Cow position:
               
chr4:13877915-13877654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
62, 108
               

               
Conread position:
               
90-352
               

               
Cow position:
               
chr4:26323458-26323201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
70, 106
               

               
Conread position:
               
90-356
               

               
Cow position:
               
chr4:5874671-5874410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
32, 105
               

               
Conread position:
               
90-364
               

               
Cow position:
               
chr4:10016866-10017133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
133, 57
               

               
Conread position:
               
91-297
               

               
Cow position:
               
chr4:1034762-1034553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
31, 26
               

               
Conread position:
               
92-362
               

               
Cow position:
               
chr4:49852119-49852392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
68, 105
               

               
Conread position:
               
92-364
               

               
Cow position:
               
chr4:15056475-15056207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
68, 98
               

               
Conread position:
               
93-364
               

               
Cow position:
               
chr4:43807881-43808149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
240, 78
               

               
Conread position:
               
99-364
               

               
Cow position:
               
chr4:58834694-58834958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
61, 12
               

               
Conread position:
               
103-364
               

               
Cow position:
               
chr4:44451061-44450796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
51, 16
               

               
Conread position:
               
111-356
               

               
Cow position:
               
chr4:533942-533699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
49, 82
               

               
Conread position:
               
120-364
               

               
Cow position:
               
chr4:8068526-8068280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
39, 79
               

               
Conread position:
               
120-364
               

               
Cow position:
               
chr4:27655732-27655491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
123-364
               

               
Cow position:
               
chr4:61235293-61235529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
12, 20
               

               
Conread position:
               
127-273
               

               
Cow position:
               
chr4:33398812-33398955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
27, 61
               

               
Conread position:
               
128-364
               

               
Cow position:
               
chr4:23888562-23888798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
32, 40
               

               
Conread position:
               
166-364
               

               
Cow position:
               
chr4:19744571-19744380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
164, 27
               

               
Conread position:
               
205-364
               

               
Cow position:
               
chr4:18489762-18489924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
206-356
               

               
Cow position:
               
chr4:52980772-52980618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
209-328
               

               
Cow position:
               
chr4:48784427-48784549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
216-364
               

               
Cow position:
               
chr4:44957204-44957355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
52, 9
               

               
Conread position:
               
217-356
               

               
Cow position:
               
chr4:68997166-68997023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
217-364
               

               
Cow position:
               
chr4:57988298-57988147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
218-352
               

               
Cow position:
               
chr4:19141912-19141774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
222-364
               

               
Cow position:
               
chr4:12413405-12413550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
222-364
               

               
Cow position:
               
chr4:14164335-14164190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
222-364
               

               
Cow position:
               
chr4:19585707-19585852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
222-364
               

               
Cow position:
               
chr4:19957576-19957431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
222-364
               

               
Cow position:
               
chr4:25906812-25906958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
222-364
               

               
Cow position:
               
chr4:45297948-45297803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
225-364
               

               
Cow position:
               
chr4:8134261-8134403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
227-364
               

               
Cow position:
               
chr4:1046917-1047057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
238-364
               

               
Cow position:
               
chr4:8649606-8649480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
96, 49
               
Show alignments to all cow chromosomes.