Cow genome map

Conread name: rmga38_o5.y1

Conread position: 1-138
Cow position: chr9:29841114-29841243 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 1-328
Cow position: chr9:55365116-55365450 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 242
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 40, 208

Conread position: 1-356
Cow position: chr9:49982870-49982537 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 257
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 329, 32

Conread position: 1-364
Cow position: chr9:37017111-37017460 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 40

Conread position: 3-184
Cow position: chr9:9516541-9516368 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 135
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 156, 37

Conread position: 3-184
Cow position: chr9:23028023-23028203 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 130
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 157, 36

Conread position: 3-203
Cow position: chr9:42498058-42498249 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 151
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 151, 38

Conread position: 3-212
Cow position: chr9:26057219-26057022 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 151
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 157, 38

Conread position: 3-214
Cow position: chr9:20038932-20038728 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 164
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 157, 38

Conread position: 3-248
Cow position: chr9:30020208-30020459 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 174
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 45, 221

Conread position: 3-266
Cow position: chr9:11870435-11870689 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 193
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 151, 43

Conread position: 3-267
Cow position: chr9:31640089-31639841 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 186
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 120, 26

Conread position: 3-270
Cow position: chr9:5340862-5341115 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 192
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 157, 37

Conread position: 3-283
Cow position: chr9:54528744-54529004 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 198
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 157, 38

Conread position: 3-287
Cow position: chr9:42445753-42445477 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 207
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 71, 26

Conread position: 3-299
Cow position: chr9:7327641-7327341 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 216
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 16, 8

Conread position: 3-302
Cow position: chr9:52505074-52504793 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 212
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 149, 37

Conread position: 3-304
Cow position: chr9:20961059-20960761 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 209
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 111, 38

Conread position: 3-329
Cow position: chr9:36445851-36446163 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 230
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 157, 37

Conread position: 3-330
Cow position: chr9:37510246-37510551 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 236
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 29, 0

Conread position: 3-330
Cow position: chr9:55074906-55074599 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 232
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 151, 37

Conread position: 3-351
Cow position: chr9:35904522-35904191 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 256
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 149, 32

Conread position: 3-354
Cow position: chr9:34523449-34523787 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 29

Conread position: 3-356
Cow position: chr9:9558197-9558547 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 251
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 70, 38

Conread position: 3-357
Cow position: chr9:1950148-1950481 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 246
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 331, 38

Conread position: 3-357
Cow position: chr9:5268785-5269125 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 256
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 156, 32

Conread position: 3-357
Cow position: chr9:35101096-35101446 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 38

Conread position: 3-361
Cow position: chr9:3844847-3844490 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 38

Conread position: 3-361
Cow position: chr9:8600565-8600937 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 38

Conread position: 3-361
Cow position: chr9:15982849-15982509 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 256
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 157, 21

Conread position: 3-361
Cow position: chr9:52724987-52724629 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 247
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 78, 30

Conread position: 3-362
Cow position: chr9:11146426-11146090 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 264
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 153, 38

Conread position: 3-363
Cow position: chr9:58673970-58674330 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 30

Conread position: 3-364
Cow position: chr9:1520501-1520153 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 23

Conread position: 3-364
Cow position: chr9:1855509-1855851 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 252
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 156, 29

Conread position: 3-364
Cow position: chr9:1984292-1983930 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 30

Conread position: 3-364
Cow position: chr9:4928860-4929196 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 259
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 257, 27

Conread position: 3-364
Cow position: chr9:6210585-6210225 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 259
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 156, 37

Conread position: 3-364
Cow position: chr9:8612516-8612878 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 107

Conread position: 3-364
Cow position: chr9:9817132-9817470 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 244
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 331, 38

Conread position: 3-364
Cow position: chr9:15215452-15215085 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 222
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 112, 38

Conread position: 3-364
Cow position: chr9:19266935-19266573 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 257
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 68, 60

Conread position: 3-364
Cow position: chr9:24726449-24726103 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 258
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 157, 37

Conread position: 3-364
Cow position: chr9:31077449-31077096 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 256
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 149, 30

Conread position: 3-364
Cow position: chr9:32812577-32812910 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 244
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 331, 36

Conread position: 3-364
Cow position: chr9:33658703-33659057 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 38

Conread position: 3-364
Cow position: chr9:38032920-38032558 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 39

Conread position: 3-364
Cow position: chr9:39681585-39681934 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 253
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 158, 71

Conread position: 3-364
Cow position: chr9:41932299-41932650 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 38

Conread position: 3-364
Cow position: chr9:64105195-64105569 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 38

Conread position: 4-179
Cow position: chr9:13994418-13994586 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 130
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 148, 29

Conread position: 4-214
Cow position: chr9:43814670-43814872 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 153
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 152, 36

Conread position: 4-350
Cow position: chr9:21459927-21459600 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 330, 37

Conread position: 4-364
Cow position: chr9:6089327-6089679 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 37

Conread position: 4-364
Cow position: chr9:16218413-16218072 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 265
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 150, 37

Conread position: 4-364
Cow position: chr9:17817111-17816755 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 241
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 154, 36

Conread position: 4-364
Cow position: chr9:18140065-18139730 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 248
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 213, 37

Conread position: 4-364
Cow position: chr9:23388448-23388101 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 252
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 139, 70

Conread position: 4-364
Cow position: chr9:38961208-38960860 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 39

Conread position: 4-364
Cow position: chr9:62442513-62442867 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 249
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 150, 11

Conread position: 5-181
Cow position: chr9:35167399-35167573 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 136
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 82, 37

Conread position: 5-333
Cow position: chr9:6952321-6952627 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 227
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 14, 20

Conread position: 5-361
Cow position: chr9:19382554-19382909 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 24

Conread position: 5-364
Cow position: chr9:52407401-52407738 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 252
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 218, 28

Conread position: 6-329
Cow position: chr9:10127436-10127127 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 233
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 154, 26

Conread position: 6-355
Cow position: chr9:20900898-20900548 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 253
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 78, 24

Conread position: 6-364
Cow position: chr9:24997284-24996923 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 34

Conread position: 6-364
Cow position: chr9:53602645-53602990 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 247
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 154, 27

Conread position: 12-251
Cow position: chr9:14184913-14185152 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 187
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 71, 29

Conread position: 12-267
Cow position: chr9:8937386-8937625 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 186
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 148, 20

Conread position: 12-304
Cow position: chr9:5246087-5246359 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 207
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 211, 28

Conread position: 12-363
Cow position: chr9:4858772-4859125 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 29

Conread position: 14-364
Cow position: chr9:43037723-43038088 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 260
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 70, 27

Conread position: 16-330
Cow position: chr9:23858781-23859094 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 225
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 102, 25

Conread position: 17-284
Cow position: chr9:12428260-12428014 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 190
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 143, 23

Conread position: 20-364
Cow position: chr9:20816088-20816417 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 250
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 141, 5

Conread position: 24-364
Cow position: chr9:59507318-59507647 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 243
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 28, 51

Conread position: 29-361
Cow position: chr9:6305637-6305319 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 235
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 131, 14

Conread position: 29-364
Cow position: chr9:26518581-26518258 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 243
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 131, 45

Conread position: 30-364
Cow position: chr9:42956588-42956928 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 238
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 45, 25

Conread position: 30-364
Cow position: chr9:47171950-47171625 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 237
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 130, 44

Conread position: 30-364
Cow position: chr9:59478953-59479286 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 242
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 56, 38

Conread position: 31-364
Cow position: chr9:5839240-5839571 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 245
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 123, 29

Conread position: 31-364
Cow position: chr9:12379338-12379017 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 238
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 129, 43

Conread position: 31-364
Cow position: chr9:17879823-17879503 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 230
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 129, 43

Conread position: 31-364
Cow position: chr9:47045840-47045519 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 228
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 132, 43

Conread position: 35-352
Cow position: chr9:3004452-3004761 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 220
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 125, 39

Conread position: 35-364
Cow position: chr9:21462588-21462263 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 55

Conread position: 36-294
Cow position: chr9:42047754-42047997 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 183
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 124, 38

Conread position: 36-294
Cow position: chr9:42049040-42049283 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 183
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 124, 38

Conread position: 36-303
Cow position: chr9:1982071-1981819 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 189
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 127, 38

Conread position: 36-329
Cow position: chr9:25996754-25997035 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 200
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 124, 38

Conread position: 36-356
Cow position: chr9:11841272-11841580 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 227
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 124, 38

Conread position: 36-356
Cow position: chr9:47799416-47799724 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 225
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 124, 38

Conread position: 36-364
Cow position: chr9:874539-874225 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 228
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 124, 38

Conread position: 36-364
Cow position: chr9:1061808-1062124 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 229
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 124, 38

Conread position: 36-364
Cow position: chr9:13313430-13313114 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 232
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 124, 38

Conread position: 36-364
Cow position: chr9:22623263-22623579 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 234
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 127, 38

Conread position: 36-364
Cow position: chr9:26326633-26326317 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 231
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 127, 38

Conread position: 36-364
Cow position: chr9:29534707-29534391 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 236
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 127, 38

Conread position: 36-364
Cow position: chr9:30334178-30334494 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 232
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 124, 38

Conread position: 36-364
Cow position: chr9:37108994-37108678 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 234
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 124, 38

Conread position: 36-364
Cow position: chr9:44202204-44202508 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 228
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 127, 38

Conread position: 36-364
Cow position: chr9:50695097-50694781 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 234
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 125, 38

Conread position: 37-364
Cow position: chr9:198656-198968 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 230
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 126, 27

Conread position: 37-364
Cow position: chr9:22656685-22656370 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 240
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 123, 39

Conread position: 37-364
Cow position: chr9:30187591-30187277 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 238
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 126, 37

Conread position: 46-364
Cow position: chr9:4192204-4191889 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 218
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 10, 148

Conread position: 53-364
Cow position: chr9:10665767-10665460 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 225
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 107, 27

Conread position: 58-364
Cow position: chr9:6887452-6887150 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 220
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 101, 12

Conread position: 59-364
Cow position: chr9:21413174-21412873 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 220
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 101, 131

Conread position: 59-364
Cow position: chr9:27781040-27781340 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 225
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 101, 11

Conread position: 60-268
Cow position: chr9:12728306-12728103 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 149
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 24, 48

Conread position: 61-355
Cow position: chr9:47263910-47263614 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 211
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 24, 130

Conread position: 62-364
Cow position: chr9:25546952-25547246 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 212
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 98, 26

Conread position: 62-364
Cow position: chr9:32688489-32688189 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 214
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 98, 57

Conread position: 62-364
Cow position: chr9:47447898-47448198 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 209
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 87, 21

Conread position: 68-330
Cow position: chr9:15006498-15006238 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 8

Conread position: 69-256
Cow position: chr9:8740849-8741034 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 142
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 91, 129

Conread position: 70-268
Cow position: chr9:22456351-22456542 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 145
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 89, 122

Conread position: 70-271
Cow position: chr9:32347847-32347652 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 143
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 90, 120

Conread position: 70-277
Cow position: chr9:4126330-4126531 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 155
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 90, 124

Conread position: 70-283
Cow position: chr9:5429769-5429975 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 153
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 93, 123

Conread position: 70-313
Cow position: chr9:51105100-51104864 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 172
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 90, 123

Conread position: 70-322
Cow position: chr9:2287333-2287578 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 177
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 83, 119

Conread position: 70-325
Cow position: chr9:27368848-27369102 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 178
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 46, 19

Conread position: 70-347
Cow position: chr9:38184192-38183920 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 201
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 90, 126

Conread position: 70-347
Cow position: chr9:41313594-41313321 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 200
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 90, 123

Conread position: 70-350
Cow position: chr9:51177792-51178067 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 201
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 90, 26

Conread position: 70-354
Cow position: chr9:3744676-3744396 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 205
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 90, 120

Conread position: 70-354
Cow position: chr9:44268864-44269143 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 203
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 93, 119

Conread position: 70-356
Cow position: chr9:5628680-5628398 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 204
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 90, 123

Conread position: 70-356
Cow position: chr9:10643076-10643358 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 206
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 90, 123

Conread position: 70-356
Cow position: chr9:34016272-34015987 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 211
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 90, 123

Conread position: 70-356
Cow position: chr9:44517844-44518129 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 209
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 257, 93

Conread position: 70-357
Cow position: chr9:64017356-64017638 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 207
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 90, 123

Conread position: 70-359
Cow position: chr9:55214637-55214941 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 203
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 90, 0

Conread position: 70-361
Cow position: chr9:17579601-17579888 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 215
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 90, 123

Conread position: 70-361
Cow position: chr9:62730056-62729770 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 216
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 90, 123

Conread position: 70-363
Cow position: chr9:48773610-48773905 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 106

Conread position: 70-364
Cow position: chr9:1296055-1296345 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 208
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 93, 120

Conread position: 70-364
Cow position: chr9:5345534-5345839 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 221
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 90, 46

Conread position: 70-364
Cow position: chr9:5886535-5886827 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 214
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 89, 123

Conread position: 70-364
Cow position: chr9:6253425-6253136 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 218
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 90, 123

Conread position: 70-364
Cow position: chr9:7058192-7058483 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 213
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 90, 124

Conread position: 70-364
Cow position: chr9:7384878-7384588 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 212
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 90, 123

Conread position: 70-364
Cow position: chr9:7830033-7830323 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 210
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 90, 120

Conread position: 70-364
Cow position: chr9:8236107-8235817 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 208
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 90, 120

Conread position: 70-364
Cow position: chr9:8720045-8720334 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 209
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 73, 110

Conread position: 70-364
Cow position: chr9:10803531-10803244 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 210
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 260, 120

Conread position: 70-364
Cow position: chr9:10857881-10857603 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 201
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 262, 57

Conread position: 70-364
Cow position: chr9:11057066-11057355 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 209
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 95, 124

Conread position: 70-364
Cow position: chr9:12259394-12259687 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 223
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 90, 120

Conread position: 70-364
Cow position: chr9:12284845-12285135 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 208
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 262, 91

Conread position: 70-364
Cow position: chr9:14003837-14003548 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 211
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 90, 25

Conread position: 70-364
Cow position: chr9:14592004-14591713 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 210
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 66, 121

Conread position: 70-364
Cow position: chr9:15241696-15241406 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 212
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 90, 123

Conread position: 70-364
Cow position: chr9:17060496-17060786 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 207
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 90, 120

Conread position: 70-364
Cow position: chr9:17410903-17410613 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 217
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 93, 120

Conread position: 70-364
Cow position: chr9:17617438-17617147 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 214
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 90, 121

Conread position: 70-364
Cow position: chr9:19546380-19546090 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 209
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 90, 123

Conread position: 70-364
Cow position: chr9:20092505-20092215 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 211
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 90, 121

Conread position: 70-364
Cow position: chr9:20406922-20407205 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 204
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 90, 56

Conread position: 70-364
Cow position: chr9:22242810-22243100 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 211
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 90, 123

Conread position: 70-364
Cow position: chr9:25645218-25645508 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 210
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 90, 120

Conread position: 70-364
Cow position: chr9:30736642-30736930 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 210
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 53, 125

Conread position: 70-364
Cow position: chr9:32973227-32972937 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 215
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 90, 123

Conread position: 70-364
Cow position: chr9:34058772-34059061 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 205
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 91, 123

Conread position: 70-364
Cow position: chr9:34237894-34238183 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 206
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 90, 120

Conread position: 70-364
Cow position: chr9:36652975-36653265 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 199
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 84, 19

Conread position: 70-364
Cow position: chr9:37173543-37173833 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 213
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 90, 123

Conread position: 70-364
Cow position: chr9:39302691-39302981 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 208
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 90, 120

Conread position: 70-364
Cow position: chr9:41145723-41146013 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 210
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 90, 123

Conread position: 70-364
Cow position: chr9:42357341-42357631 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 213
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 93, 123

Conread position: 70-364
Cow position: chr9:50002213-50002502 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 211
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 93, 25

Conread position: 70-364
Cow position: chr9:51773322-51773612 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 208
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 90, 123

Conread position: 70-364
Cow position: chr9:51779839-51780129 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 208
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 90, 123

Conread position: 70-364
Cow position: chr9:52753361-52753649 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 211
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 90, 74

Conread position: 70-364
Cow position: chr9:54473420-54473710 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 215
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 93, 123

Conread position: 70-364
Cow position: chr9:58251832-58252135 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 209
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 90, 0

Conread position: 71-304
Cow position: chr9:24398850-24398622 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 177
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 83, 128

Conread position: 71-356
Cow position: chr9:10566504-10566784 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 207
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 80, 118

Conread position: 71-364
Cow position: chr9:55298770-55299061 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 197
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 160, 18

Conread position: 71-364
Cow position: chr9:60554412-60554123 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 209
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 89, 122

Conread position: 72-352
Cow position: chr9:13181770-13181493 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 205
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 79, 122

Conread position: 72-356
Cow position: chr9:44579361-44579645 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 213
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 88, 56

Conread position: 72-361
Cow position: chr9:29825599-29825882 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 210
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 81, 20

Conread position: 72-364
Cow position: chr9:6763911-6764199 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 211
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 88, 118

Conread position: 72-364
Cow position: chr9:10327094-10326805 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 213
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 89, 121

Conread position: 72-364
Cow position: chr9:12545955-12545667 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 208
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 88, 121

Conread position: 72-364
Cow position: chr9:25238557-25238844 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 89

Conread position: 72-364
Cow position: chr9:33144092-33144380 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 189
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 257, 14

Conread position: 73-364
Cow position: chr9:7103372-7103659 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 205
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 87, 120

Conread position: 74-294
Cow position: chr9:9822958-9822734 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 173
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 51, 9

Conread position: 74-317
Cow position: chr9:18110584-18110337 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 176
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 86, 115

Conread position: 74-354
Cow position: chr9:62131892-62131610 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 191
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 17, 9

Conread position: 74-364
Cow position: chr9:13221607-13221330 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 205
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 10, 115

Conread position: 74-364
Cow position: chr9:16010522-16010815 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 191
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 79, 119

Conread position: 74-364
Cow position: chr9:42172571-42172289 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 258, 89

Conread position: 76-364
Cow position: chr9:2676194-2676478 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 210
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 84, 117

Conread position: 76-364
Cow position: chr9:3755992-3756276 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 209
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 79, 114

Conread position: 76-364
Cow position: chr9:13115627-13115918 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 199
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 85, 117

Conread position: 76-364
Cow position: chr9:17296246-17296534 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 209
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 87, 113

Conread position: 76-364
Cow position: chr9:19379907-19380195 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 218
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 32, 7

Conread position: 76-364
Cow position: chr9:27038969-27038684 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 213
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 84, 114

Conread position: 76-364
Cow position: chr9:33823383-33823685 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 217
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 84, 0

Conread position: 76-364
Cow position: chr9:40327258-40326974 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 213
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 85, 114

Conread position: 76-364
Cow position: chr9:47882430-47882714 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 208
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 84, 114

Conread position: 77-364
Cow position: chr9:31406095-31406382 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 191
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 49, 18

Conread position: 78-293
Cow position: chr9:55042604-55042816 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 153
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 76, 106

Conread position: 78-311
Cow position: chr9:63966195-63966425 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 175
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 82, 41

Conread position: 78-361
Cow position: chr9:3075996-3075711 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 123

Conread position: 78-364
Cow position: chr9:34956004-34956287 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 197
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 21, 51

Conread position: 79-356
Cow position: chr9:58614842-58615114 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 118

Conread position: 79-361
Cow position: chr9:9957338-9957617 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 258, 8

Conread position: 79-364
Cow position: chr9:9416055-9415769 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 205
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 81, 58

Conread position: 81-294
Cow position: chr9:51566204-51566004 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 158
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 79, 91

Conread position: 81-364
Cow position: chr9:20942315-20942049 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 207
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 79, 39

Conread position: 81-364
Cow position: chr9:28025671-28025392 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 204
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 79, 112

Conread position: 81-364
Cow position: chr9:43301756-43302032 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 199
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 79, 114

Conread position: 83-271
Cow position: chr9:38385579-38385392 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 143
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 77, 115

Conread position: 84-355
Cow position: chr9:32266095-32265834 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 208
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 70, 136

Conread position: 86-255
Cow position: chr9:13793790-13793958 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 133
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 69, 103

Conread position: 86-277
Cow position: chr9:25972779-25972969 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 141
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 74, 110

Conread position: 86-348
Cow position: chr9:12184116-12184382 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 199
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 73, 110

Conread position: 86-364
Cow position: chr9:4861726-4862005 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 197
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 50, 135

Conread position: 87-364
Cow position: chr9:8599933-8600226 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 211
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 35, 277

Conread position: 87-364
Cow position: chr9:52633207-52632939 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 210
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 73, 111

Conread position: 89-361
Cow position: chr9:28016985-28017251 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 197
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 70, 101

Conread position: 90-350
Cow position: chr9:62763492-62763767 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 206
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 65, 82

Conread position: 90-356
Cow position: chr9:8657101-8656822 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 193
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 67, 107

Conread position: 91-364
Cow position: chr9:55983423-55983151 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 206
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 70, 33

Conread position: 96-328
Cow position: chr9:13493875-13493650 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 171
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 64, 98

Conread position: 99-294
Cow position: chr9:41957981-41958175 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 148
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 61, 118

Conread position: 99-363
Cow position: chr9:12356154-12356431 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 195
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 64, 0

Conread position: 99-363
Cow position: chr9:44553085-44553351 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 100

Conread position: 104-315
Cow position: chr9:18381753-18381964 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 154
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 50, 68

Conread position: 120-361
Cow position: chr9:47836592-47836349 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 176
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 39, 78

Conread position: 124-364
Cow position: chr9:12566695-12566936 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 173
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 39, 66

Conread position: 124-364
Cow position: chr9:45384031-45383795 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 173
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 36, 69

Conread position: 124-364
Cow position: chr9:48794488-48794724 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 173
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 36, 70

Conread position: 125-361
Cow position: chr9:35057923-35057689 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 163
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 35, 89

Conread position: 127-322
Cow position: chr9:11831474-11831668 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 141
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 33, 91

Conread position: 128-318
Cow position: chr9:2113423-2113233 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 148
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 32, 65

Conread position: 128-364
Cow position: chr9:44218657-44218412 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 182
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 32, 0

Conread position: 129-355
Cow position: chr9:30675872-30675650 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 165
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 31, 64

Conread position: 155-364
Cow position: chr9:5058326-5058526 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 153
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 68, 32

Conread position: 165-364
Cow position: chr9:7389979-7389784 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 145
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 60, 22

Conread position: 165-364
Cow position: chr9:34568408-34568209 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 151
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 165, 6

Conread position: 166-364
Cow position: chr9:54438215-54438416 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 150
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 58, 0

Conread position: 169-364
Cow position: chr9:26124442-26124249 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 150
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 164, 27

Conread position: 200-364
Cow position: chr9:18506089-18506257 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 129
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 26, 0

Conread position: 200-364
Cow position: chr9:19568060-19568228 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 122
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 23, 67

Conread position: 201-361
Cow position: chr9:23527467-23527303 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 124
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 23, 156

Conread position: 216-364
Cow position: chr9:20417128-20417280 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 112
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 8, 0

Conread position: 217-364
Cow position: chr9:40142637-40142788 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 9, 0

Conread position: 222-328
Cow position: chr9:16086758-16086652 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 89
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 222-354
Cow position: chr9:44264385-44264520 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 102
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 108, 0

Conread position: 222-361
Cow position: chr9:8187606-8187748 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 106
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 108, 0

Conread position: 222-364
Cow position: chr9:32228976-32229121 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 107
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 112, 0

Conread position: 222-364
Cow position: chr9:37908565-37908420 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 107
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 108, 0

Conread position: 222-364
Cow position: chr9:50841163-50841018 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 108
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 108, 0

Conread position: 228-364
Cow position: chr9:49964336-49964473 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 108, 0

Conread position: 235-364
Cow position: chr9:64007047-64006916 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 101
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 102, 51

Conread position: 236-364
Cow position: chr9:42868169-42868300 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 102
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 96, 0

Show alignments to all cow chromosomes.