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Cow genome map

           
Conread name:
           
rmgm01_b12.y1
        

               
Conread position:
               
2-353
               

               
Cow position:
               
chr13:60302008-60301665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
113, 63
               

               
Conread position:
               
12-380
               

               
Cow position:
               
chr13:29820376-29820000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
103, 56
               

               
Conread position:
               
13-376
               

               
Cow position:
               
chr13:15849845-15850225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
97, 39
               

               
Conread position:
               
46-341
               

               
Cow position:
               
chr13:2302955-2302638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
40, 299
               

               
Conread position:
               
50-389
               

               
Cow position:
               
chr13:29630755-29631099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
41, 16
               

               
Conread position:
               
58-380
               

               
Cow position:
               
chr13:1839273-1839618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
33, 70
               

               
Conread position:
               
92-386
               

               
Cow position:
               
chr13:33048767-33049067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
19, 124
               

               
Conread position:
               
94-380
               

               
Cow position:
               
chr13:18166677-18166968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
12, 26
               

               
Conread position:
               
102-389
               

               
Cow position:
               
chr13:11290864-11290571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
86, 31
               

               
Conread position:
               
110-379
               

               
Cow position:
               
chr13:12249606-12249876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
30, 54
               

               
Conread position:
               
114-379
               

               
Cow position:
               
chr13:11025398-11025665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
62, 26
               

               
Conread position:
               
114-380
               

               
Cow position:
               
chr13:18944511-18944775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
29, 117
               

               
Conread position:
               
116-378
               

               
Cow position:
               
chr13:19451764-19451492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
24, 16
               

               
Conread position:
               
125-366
               

               
Cow position:
               
chr13:37795418-37795659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
38, 165
               

               
Conread position:
               
126-380
               

               
Cow position:
               
chr13:21402822-21402557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
54, 7
               

               
Conread position:
               
129-389
               

               
Cow position:
               
chr13:19393269-19393534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
5, 17
               

               
Conread position:
               
134-380
               

               
Cow position:
               
chr13:7010450-7010707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
5, 53
               

               
Conread position:
               
135-380
               

               
Cow position:
               
chr13:37497772-37497520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
41, 157
               

               
Conread position:
               
146-380
               

               
Cow position:
               
chr13:9803061-9803295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
16, 149
               

               
Conread position:
               
147-389
               

               
Cow position:
               
chr13:43848787-43849029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
31, 63
               

               
Conread position:
               
151-361
               

               
Cow position:
               
chr13:43812086-43812304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
45, 21
               

               
Conread position:
               
151-380
               

               
Cow position:
               
chr13:15974612-15974848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
42, 8
               

               
Conread position:
               
151-380
               

               
Cow position:
               
chr13:25926790-25927030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
31, 220
               

               
Conread position:
               
151-383
               

               
Cow position:
               
chr13:6061008-6060767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
47, 219
               

               
Conread position:
               
151-388
               

               
Cow position:
               
chr13:52178108-52178344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
47, 119
               

               
Conread position:
               
152-379
               

               
Cow position:
               
chr13:8838989-8838757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
22, 213
               

               
Conread position:
               
153-380
               

               
Cow position:
               
chr13:53566597-53566834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
43, 27
               

               
Conread position:
               
159-320
               

               
Cow position:
               
chr13:56842879-56842714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
37, 15
               

               
Conread position:
               
159-360
               

               
Cow position:
               
chr13:46458629-46458841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
37, 98
               

               
Conread position:
               
159-371
               

               
Cow position:
               
chr13:11947732-11947499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
38, 222
               

               
Conread position:
               
159-380
               

               
Cow position:
               
chr13:38012364-38012599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
30, 215
               

               
Conread position:
               
160-376
               

               
Cow position:
               
chr13:31813886-31814102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
66, 20
               

               
Conread position:
               
160-379
               

               
Cow position:
               
chr13:1959018-1959246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
33, 209
               

               
Conread position:
               
160-389
               

               
Cow position:
               
chr13:24280255-24280495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
160-389
               

               
Cow position:
               
chr13:24822755-24822523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
36, 189
               

               
Conread position:
               
160-389
               

               
Cow position:
               
chr13:34281686-34281927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
36, 14
               

               
Conread position:
               
160-389
               

               
Cow position:
               
chr13:47007718-47007491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
36, 31
               

               
Conread position:
               
161-375
               

               
Cow position:
               
chr13:54094822-54095037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
33, 118
               

               
Conread position:
               
164-376
               

               
Cow position:
               
chr13:24369596-24369819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
32, 7
               

               
Conread position:
               
165-380
               

               
Cow position:
               
chr13:12670431-12670207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
33, 6
               

               
Conread position:
               
165-380
               

               
Cow position:
               
chr13:25817542-25817751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
32, 15
               

               
Conread position:
               
165-380
               

               
Cow position:
               
chr13:32316688-32316908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
34, 135
               

               
Conread position:
               
166-378
               

               
Cow position:
               
chr13:17815783-17816007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
30, 17
               

               
Conread position:
               
166-378
               

               
Cow position:
               
chr13:55316175-55315953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
28, 204
               

               
Conread position:
               
166-379
               

               
Cow position:
               
chr13:20863999-20863784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
23, 14
               

               
Conread position:
               
166-380
               

               
Cow position:
               
chr13:47863686-47863461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
30, 205
               

               
Conread position:
               
166-380
               

               
Cow position:
               
chr13:57028314-57028093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
39, 5
               

               
Conread position:
               
167-373
               

               
Cow position:
               
chr13:21242066-21241861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
55, 7
               

               
Conread position:
               
167-380
               

               
Cow position:
               
chr13:21235670-21235447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
29, 13
               

               
Conread position:
               
167-380
               

               
Cow position:
               
chr13:45604401-45604180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
9, 201
               

               
Conread position:
               
167-388
               

               
Cow position:
               
chr13:15172395-15172161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
29, 13
               

               
Conread position:
               
167-389
               

               
Cow position:
               
chr13:21107158-21107371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
29, 46
               

               
Conread position:
               
167-389
               

               
Cow position:
               
chr13:39487317-39487097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
55, 59
               

               
Conread position:
               
168-350
               

               
Cow position:
               
chr13:151977-152160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
58, 12
               

               
Conread position:
               
168-369
               

               
Cow position:
               
chr13:2774143-2774352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
28, 142
               

               
Conread position:
               
168-369
               

               
Cow position:
               
chr13:43384607-43384407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
115, 38
               

               
Conread position:
               
168-375
               

               
Cow position:
               
chr13:47964179-47963968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
28, 121
               

               
Conread position:
               
168-380
               

               
Cow position:
               
chr13:10932570-10932790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
26, 200
               

               
Conread position:
               
168-380
               

               
Cow position:
               
chr13:13176667-13176887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
28, 107
               

               
Conread position:
               
168-380
               

               
Cow position:
               
chr13:24376510-24376728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
14, 121
               

               
Conread position:
               
168-380
               

               
Cow position:
               
chr13:47502707-47502483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
26, 11
               

               
Conread position:
               
168-389
               

               
Cow position:
               
chr13:890153-889932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
28, 12
               

               
Conread position:
               
168-390
               

               
Cow position:
               
chr13:56155136-56154913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
57, 12
               

               
Conread position:
               
169-380
               

               
Cow position:
               
chr13:17981822-17982027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
9, 58
               

               
Conread position:
               
170-367
               

               
Cow position:
               
chr13:17800092-17800297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
21, 198
               

               
Conread position:
               
171-360
               

               
Cow position:
               
chr13:18172358-18172559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
25, 9
               

               
Conread position:
               
171-363
               

               
Cow position:
               
chr13:25531769-25531566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
171-379
               

               
Cow position:
               
chr13:8201464-8201248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
25, 83
               

               
Conread position:
               
171-380
               

               
Cow position:
               
chr13:15869141-15869357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
25, 85
               

               
Conread position:
               
171-380
               

               
Cow position:
               
chr13:51528423-51528208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
51, 9
               

               
Conread position:
               
171-380
               

               
Cow position:
               
chr13:55295603-55295388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
27, 10
               

               
Conread position:
               
171-389
               

               
Cow position:
               
chr13:17622303-17622531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
27, 154
               

               
Conread position:
               
172-379
               

               
Cow position:
               
chr13:60509098-60508879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
43, 200
               

               
Conread position:
               
172-380
               

               
Cow position:
               
chr13:21275877-21276093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
24, 196
               

               
Conread position:
               
172-389
               

               
Cow position:
               
chr13:44202019-44202236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
36, 15
               

               
Conread position:
               
173-326
               

               
Cow position:
               
chr13:1368046-1368203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
29, 22
               

               
Conread position:
               
173-357
               

               
Cow position:
               
chr13:8245311-8245116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
173-369
               

               
Cow position:
               
chr13:35719118-35718907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
24, 202
               

               
Conread position:
               
173-380
               

               
Cow position:
               
chr13:11460653-11460861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
110, 23
               

               
Conread position:
               
173-380
               

               
Cow position:
               
chr13:47591116-47590903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
48, 23
               

               
Conread position:
               
173-389
               

               
Cow position:
               
chr13:6621568-6621351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
54, 22
               

               
Conread position:
               
173-389
               

               
Cow position:
               
chr13:10859931-10859716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
110, 141
               

               
Conread position:
               
173-389
               

               
Cow position:
               
chr13:45023190-45022961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
18, 208
               

               
Conread position:
               
174-380
               

               
Cow position:
               
chr13:37484251-37484032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
8, 199
               

               
Conread position:
               
175-380
               

               
Cow position:
               
chr13:17821244-17821022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
21, 5
               

               
Conread position:
               
176-380
               

               
Cow position:
               
chr13:1636035-1636239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
20, 75
               

               
Conread position:
               
176-380
               

               
Cow position:
               
chr13:6651223-6651024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
20, 31
               

               
Conread position:
               
176-386
               

               
Cow position:
               
chr13:30772951-30773155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
176-389
               

               
Cow position:
               
chr13:16243254-16243472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
21, 61
               

               
Conread position:
               
180-380
               

               
Cow position:
               
chr13:27525237-27525024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
16, 193
               

               
Conread position:
               
181-387
               

               
Cow position:
               
chr13:54331048-54331264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
16, 189
               

               
Conread position:
               
192-389
               

               
Cow position:
               
chr13:34995280-34995079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
34, 80
               

               
Conread position:
               
193-389
               

               
Cow position:
               
chr13:11955062-11954862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
46, 92
               

               
Conread position:
               
195-388
               

               
Cow position:
               
chr13:41608319-41608126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
30, 110
               

               
Conread position:
               
196-377
               

               
Cow position:
               
chr13:50823503-50823321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
30, 45
               

               
Conread position:
               
196-379
               

               
Cow position:
               
chr13:28683412-28683595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
33, 70
               

               
Conread position:
               
196-379
               

               
Cow position:
               
chr13:46298597-46298401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
196-388
               

               
Cow position:
               
chr13:12233404-12233210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
30, 45
               

               
Conread position:
               
198-356
               

               
Cow position:
               
chr13:6894145-6894309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
198-361
               

               
Cow position:
               
chr13:563091-562917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
198-362
               

               
Cow position:
               
chr13:22025657-22025480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
198-370
               

               
Cow position:
               
chr13:6603162-6602983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
20, 169
               

               
Conread position:
               
198-370
               

               
Cow position:
               
chr13:23444763-23444582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
28, 117
               

               
Conread position:
               
198-377
               

               
Cow position:
               
chr13:13089079-13089258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
85, 27
               

               
Conread position:
               
198-378
               

               
Cow position:
               
chr13:33282057-33282249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
28, 175
               

               
Conread position:
               
198-379
               

               
Cow position:
               
chr13:48626808-48626982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
85, 28
               

               
Conread position:
               
198-380
               

               
Cow position:
               
chr13:22886943-22886754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
29, 169
               

               
Conread position:
               
198-380
               

               
Cow position:
               
chr13:24539543-24539733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
28, 171
               

               
Conread position:
               
198-380
               

               
Cow position:
               
chr13:30510111-30510299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
28, 38
               

               
Conread position:
               
198-380
               

               
Cow position:
               
chr13:60974134-60974313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
28, 96
               

               
Conread position:
               
198-387
               

               
Cow position:
               
chr13:4604345-4604536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
39, 27
               

               
Conread position:
               
198-388
               

               
Cow position:
               
chr13:6945419-6945619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
28, 171
               

               
Conread position:
               
198-389
               

               
Cow position:
               
chr13:46501353-46501551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
25, 169
               

               
Conread position:
               
199-379
               

               
Cow position:
               
chr13:23167044-23166860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
27, 166
               

               
Conread position:
               
199-387
               

               
Cow position:
               
chr13:4208763-4208572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
40, 156
               

               
Conread position:
               
199-388
               

               
Cow position:
               
chr13:6759741-6759544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
27, 138
               

               
Conread position:
               
202-366
               

               
Cow position:
               
chr13:20839619-20839792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
202-368
               

               
Cow position:
               
chr13:17346860-17347034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
202-370
               

               
Cow position:
               
chr13:20649928-20649755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
24, 89
               

               
Conread position:
               
202-378
               

               
Cow position:
               
chr13:51940792-51940965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
27, 75
               

               
Conread position:
               
202-380
               

               
Cow position:
               
chr13:311486-311668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
24, 162
               

               
Conread position:
               
202-380
               

               
Cow position:
               
chr13:1155648-1155470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
81, 158
               

               
Conread position:
               
202-380
               

               
Cow position:
               
chr13:14544173-14544360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
14, 167
               

               
Conread position:
               
202-380
               

               
Cow position:
               
chr13:26383184-26382993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
22, 171
               

               
Conread position:
               
202-386
               

               
Cow position:
               
chr13:25435064-25434885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
30, 67
               

               
Conread position:
               
202-388
               

               
Cow position:
               
chr13:43762225-43762413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
26, 93
               

               
Conread position:
               
202-388
               

               
Cow position:
               
chr13:61976909-61976719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
27, 147
               

               
Conread position:
               
202-389
               

               
Cow position:
               
chr13:19555814-19555999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
81, 55
               

               
Conread position:
               
202-389
               

               
Cow position:
               
chr13:32717818-32717624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
205-370
               

               
Cow position:
               
chr13:11096233-11096400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
21, 71
               

               
Conread position:
               
205-379
               

               
Cow position:
               
chr13:37521321-37521143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
20, 159
               

               
Conread position:
               
205-380
               

               
Cow position:
               
chr13:33517864-33517686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
21, 45
               

               
Conread position:
               
205-385
               

               
Cow position:
               
chr13:43194234-43194418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
29, 71
               

               
Conread position:
               
205-388
               

               
Cow position:
               
chr13:18243920-18244102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
20, 75
               

               
Conread position:
               
206-380
               

               
Cow position:
               
chr13:32017466-32017285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
20, 159
               

               
Conread position:
               
206-389
               

               
Cow position:
               
chr13:47852090-47852279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
32, 9
               

               
Conread position:
               
206-389
               

               
Cow position:
               
chr13:52284868-52285062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
22, 166
               

               
Conread position:
               
208-378
               

               
Cow position:
               
chr13:32773430-32773598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
18, 73
               

               
Conread position:
               
208-380
               

               
Cow position:
               
chr13:32535726-32535891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
208-389
               

               
Cow position:
               
chr13:16127881-16128064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
75, 23
               

               
Conread position:
               
210-380
               

               
Cow position:
               
chr13:33352297-33352129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
73, 47
               

               
Conread position:
               
211-389
               

               
Cow position:
               
chr13:9246788-9246961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
212-388
               

               
Cow position:
               
chr13:7663358-7663183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
14, 74
               

               
Conread position:
               
212-391
               

               
Cow position:
               
chr13:9125739-9125922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
34, 117
               

               
Conread position:
               
213-380
               

               
Cow position:
               
chr13:55406590-55406427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
13, 74
               

               
Conread position:
               
213-388
               

               
Cow position:
               
chr13:22277100-22276923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
34, 121
               

               
Conread position:
               
219-377
               

               
Cow position:
               
chr13:46637056-46636896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
15, 8
               

               
Conread position:
               
219-388
               

               
Cow position:
               
chr13:24373476-24373650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
64, 20
               

               
Conread position:
               
225-373
               

               
Cow position:
               
chr13:11767959-11767810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
57, 136
               

               
Conread position:
               
226-388
               

               
Cow position:
               
chr13:6079335-6079173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
57, 133
               

               
Conread position:
               
227-370
               

               
Cow position:
               
chr13:17745324-17745470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
227-377
               

               
Cow position:
               
chr13:21155408-21155254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
55, 142
               

               
Conread position:
               
227-378
               

               
Cow position:
               
chr13:7076342-7076492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
56, 43
               

               
Conread position:
               
227-380
               

               
Cow position:
               
chr13:17292048-17291893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
56, 135
               

               
Conread position:
               
227-380
               

               
Cow position:
               
chr13:20706121-20705965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
56, 135
               

               
Conread position:
               
227-380
               

               
Cow position:
               
chr13:20820751-20820603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
227-380
               

               
Cow position:
               
chr13:41359835-41359987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
56, 13
               

               
Conread position:
               
227-388
               

               
Cow position:
               
chr13:12244933-12244770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
16, 135
               

               
Conread position:
               
227-388
               

               
Cow position:
               
chr13:49283260-49283097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
56, 79
               

               
Conread position:
               
227-389
               

               
Cow position:
               
chr13:30693790-30693948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
53, 38
               

               
Conread position:
               
228-380
               

               
Cow position:
               
chr13:55674123-55673967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
55, 136
               

               
Conread position:
               
228-380
               

               
Cow position:
               
chr13:55843569-55843722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
60, 133
               

               
Conread position:
               
232-388
               

               
Cow position:
               
chr13:15956890-15957051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
235-366
               

               
Cow position:
               
chr13:31453955-31453826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
48, 13
               

               
Conread position:
               
235-387
               

               
Cow position:
               
chr13:35853261-35853105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
7, 130
               

               
Conread position:
               
237-379
               

               
Cow position:
               
chr13:57498477-57498330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
46, 123
               

               
Conread position:
               
240-380
               

               
Cow position:
               
chr13:29671341-29671203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
43, 118
               

               
Conread position:
               
240-380
               

               
Cow position:
               
chr13:62018997-62018854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
244-370
               

               
Cow position:
               
chr13:38691442-38691311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
258-380
               

               
Cow position:
               
chr13:16952791-16952912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
108, 0
               
Show alignments to all cow chromosomes.