Cow genome map
| Conread name: | rmgm01_b12.y1 |
| Conread position: | 1-380 |
| Cow position: | chr17:20652703-20653107 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 278 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 21, 8 |
| Conread position: | 7-380 |
| Cow position: | chr17:5381151-5380754 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 270 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 96, 61 |
| Conread position: | 7-380 |
| Cow position: | chr17:11655578-11655214 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 248 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 96, 61 |
| Conread position: | 7-389 |
| Cow position: | chr17:21312638-21313022 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 274 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 71, 45 |
| Conread position: | 17-387 |
| Cow position: | chr17:27505286-27504907 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 266 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 89, 41 |
| Conread position: | 20-380 |
| Cow position: | chr17:3578408-3578033 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 259 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 97, 63 |
| Conread position: | 50-370 |
| Cow position: | chr17:43537575-43537912 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 219 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 90, 61 |
| Conread position: | 76-379 |
| Cow position: | chr17:20055786-20055459 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 238 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 17, 13 |
| Conread position: | 81-379 |
| Cow position: | chr17:20815470-20815162 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 22, 35 |
| Conread position: | 102-341 |
| Cow position: | chr17:6080042-6079804 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 112, 61 |
| Conread position: | 102-353 |
| Cow position: | chr17:12538753-12539022 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 40, 9 |
| Conread position: | 119-361 |
| Cow position: | chr17:10321316-10321569 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 20, 79 |
| Conread position: | 126-378 |
| Cow position: | chr17:23723927-23723675 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 157, 11 |
| Conread position: | 134-389 |
| Cow position: | chr17:12477964-12477697 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 10, 238 |
| Conread position: | 136-379 |
| Cow position: | chr17:31855055-31854810 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 91, 70 |
| Conread position: | 149-380 |
| Cow position: | chr17:9748774-9748558 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 42, 50 |
| Conread position: | 151-369 |
| Cow position: | chr17:5246920-5246695 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 11, 217 |
| Conread position: | 151-388 |
| Cow position: | chr17:13922507-13922253 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 151-388 |
| Cow position: | chr17:14848515-14848743 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 172 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 12, 80 |
| Conread position: | 153-378 |
| Cow position: | chr17:41892038-41892281 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 175 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 9, 105 |
| Conread position: | 157-367 |
| Cow position: | chr17:24128979-24128768 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 73, 49 |
| Conread position: | 159-350 |
| Cow position: | chr17:28847647-28847851 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 149 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 159-380 |
| Cow position: | chr17:7810727-7810951 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 37, 12 |
| Conread position: | 159-388 |
| Cow position: | chr17:7252060-7251822 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 37, 61 |
| Conread position: | 160-341 |
| Cow position: | chr17:7047539-7047712 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 66, 35 |
| Conread position: | 160-380 |
| Cow position: | chr17:3042492-3042267 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 163 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 36, 133 |
| Conread position: | 160-380 |
| Cow position: | chr17:21114939-21115160 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 36, 19 |
| Conread position: | 162-389 |
| Cow position: | chr17:24587637-24587397 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 171 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 34, 18 |
| Conread position: | 163-355 |
| Cow position: | chr17:43717303-43717501 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 166-379 |
| Cow position: | chr17:11374688-11374900 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 39, 5 |
| Conread position: | 166-387 |
| Cow position: | chr17:25755805-25755565 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 28, 166 |
| Conread position: | 166-388 |
| Cow position: | chr17:12216062-12216297 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 30, 5 |
| Conread position: | 167-324 |
| Cow position: | chr17:41811822-41811660 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 57, 27 |
| Conread position: | 167-389 |
| Cow position: | chr17:8214927-8214702 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 61, 39 |
| Conread position: | 168-380 |
| Cow position: | chr17:1061049-1061274 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 28, 160 |
| Conread position: | 168-380 |
| Cow position: | chr17:10634051-10634268 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 28, 13 |
| Conread position: | 168-380 |
| Cow position: | chr17:15102882-15103100 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 23, 63 |
| Conread position: | 168-380 |
| Cow position: | chr17:21003819-21004043 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 23, 12 |
| Conread position: | 168-389 |
| Cow position: | chr17:32993615-32993834 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 28, 12 |
| Conread position: | 169-380 |
| Cow position: | chr17:18592449-18592227 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 170-345 |
| Cow position: | chr17:29157423-29157240 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 52, 120 |
| Conread position: | 170-380 |
| Cow position: | chr17:16371264-16371040 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 19, 205 |
| Conread position: | 172-369 |
| Cow position: | chr17:12059088-12059291 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 24, 111 |
| Conread position: | 172-380 |
| Cow position: | chr17:19755894-19756112 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 26, 121 |
| Conread position: | 172-380 |
| Cow position: | chr17:25740959-25740738 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 24, 201 |
| Conread position: | 172-380 |
| Cow position: | chr17:41290016-41290229 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 160 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 24, 145 |
| Conread position: | 173-363 |
| Cow position: | chr17:14231089-14231279 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 110, 96 |
| Conread position: | 173-374 |
| Cow position: | chr17:27429581-27429372 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 23, 58 |
| Conread position: | 173-377 |
| Cow position: | chr17:38647063-38646859 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 156 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 23, 114 |
| Conread position: | 173-379 |
| Cow position: | chr17:25541815-25542023 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 23, 177 |
| Conread position: | 173-380 |
| Cow position: | chr17:3306872-3306656 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 158 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 23, 197 |
| Conread position: | 173-388 |
| Cow position: | chr17:23803464-23803248 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 22, 120 |
| Conread position: | 173-388 |
| Cow position: | chr17:23879822-23880048 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 23, 198 |
| Conread position: | 173-389 |
| Cow position: | chr17:2079766-2079540 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 21, 198 |
| Conread position: | 174-366 |
| Cow position: | chr17:35180837-35180639 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 44, 98 |
| Conread position: | 176-370 |
| Cow position: | chr17:12536466-12536671 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 183-380 |
| Cow position: | chr17:7559678-7559883 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 23, 185 |
| Conread position: | 188-380 |
| Cow position: | chr17:31798797-31798601 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 22, 8 |
| Conread position: | 192-357 |
| Cow position: | chr17:24773662-24773493 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 192-380 |
| Cow position: | chr17:27697720-27697904 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 145 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 12, 92 |
| Conread position: | 192-388 |
| Cow position: | chr17:25707939-25707735 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 34, 175 |
| Conread position: | 192-389 |
| Cow position: | chr17:39012708-39012497 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 12, 33 |
| Conread position: | 193-380 |
| Cow position: | chr17:41029934-41029740 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 195-380 |
| Cow position: | chr17:18494538-18494727 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 32, 124 |
| Conread position: | 195-389 |
| Cow position: | chr17:36817919-36817721 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 31, 102 |
| Conread position: | 196-374 |
| Cow position: | chr17:21243813-21243992 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 135 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 87, 22 |
| Conread position: | 196-375 |
| Cow position: | chr17:6624235-6624051 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 30, 169 |
| Conread position: | 196-380 |
| Cow position: | chr17:1327994-1328182 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 30, 169 |
| Conread position: | 196-380 |
| Cow position: | chr17:7698030-7697844 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 50, 156 |
| Conread position: | 196-380 |
| Cow position: | chr17:11837399-11837210 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 30, 169 |
| Conread position: | 196-380 |
| Cow position: | chr17:18246056-18245863 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 7, 172 |
| Conread position: | 196-389 |
| Cow position: | chr17:13989196-13989395 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 10, 170 |
| Conread position: | 196-389 |
| Cow position: | chr17:17452626-17452823 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 26, 148 |
| Conread position: | 196-389 |
| Cow position: | chr17:20592207-20592008 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 21, 126 |
| Conread position: | 198-362 |
| Cow position: | chr17:22564156-22563988 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 28, 107 |
| Conread position: | 198-363 |
| Cow position: | chr17:33999074-33999240 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 29, 43 |
| Conread position: | 198-368 |
| Cow position: | chr17:18824767-18824589 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 198-375 |
| Cow position: | chr17:33052834-33052656 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 28, 93 |
| Conread position: | 198-379 |
| Cow position: | chr17:8279734-8279918 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 28, 165 |
| Conread position: | 198-379 |
| Cow position: | chr17:16895330-16895505 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 82, 27 |
| Conread position: | 198-380 |
| Cow position: | chr17:5041707-5041888 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 145 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 145, 0 |
| Conread position: | 198-389 |
| Cow position: | chr17:20216140-20215951 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 28, 84 |
| Conread position: | 199-361 |
| Cow position: | chr17:34595914-34595745 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 202-376 |
| Cow position: | chr17:44861826-44862003 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 24, 38 |
| Conread position: | 202-377 |
| Cow position: | chr17:20993069-20993248 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 27, 103 |
| Conread position: | 202-379 |
| Cow position: | chr17:4721461-4721276 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 24, 107 |
| Conread position: | 202-380 |
| Cow position: | chr17:8544278-8544098 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 24, 156 |
| Conread position: | 202-380 |
| Cow position: | chr17:9117617-9117431 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 24, 165 |
| Conread position: | 202-380 |
| Cow position: | chr17:11171763-11171584 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 24, 64 |
| Conread position: | 202-380 |
| Cow position: | chr17:13143720-13143902 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 24, 162 |
| Conread position: | 202-380 |
| Cow position: | chr17:21335724-21335910 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 138 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 24, 166 |
| Conread position: | 202-380 |
| Cow position: | chr17:24580326-24580511 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 27, 166 |
| Conread position: | 202-380 |
| Cow position: | chr17:28540000-28539824 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 24, 89 |
| Conread position: | 202-380 |
| Cow position: | chr17:37163550-37163739 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 22, 169 |
| Conread position: | 202-388 |
| Cow position: | chr17:3387258-3387074 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 23, 94 |
| Conread position: | 202-388 |
| Cow position: | chr17:15333742-15333930 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 23, 84 |
| Conread position: | 202-389 |
| Cow position: | chr17:7760495-7760684 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 32, 73 |
| Conread position: | 202-389 |
| Cow position: | chr17:8690471-8690661 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 27, 107 |
| Conread position: | 202-389 |
| Cow position: | chr17:9778218-9778030 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 27, 86 |
| Conread position: | 202-389 |
| Cow position: | chr17:38276658-38276471 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 24, 85 |
| Conread position: | 205-364 |
| Cow position: | chr17:35311394-35311224 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 205-380 |
| Cow position: | chr17:25590267-25590448 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 21, 73 |
| Conread position: | 205-387 |
| Cow position: | chr17:18473147-18472960 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 11, 156 |
| Conread position: | 205-389 |
| Cow position: | chr17:32554057-32554244 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 143 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 23, 38 |
| Conread position: | 207-380 |
| Cow position: | chr17:5360604-5360774 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 131 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 11, 123 |
| Conread position: | 207-389 |
| Cow position: | chr17:1358835-1359018 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 18, 79 |
| Conread position: | 208-386 |
| Cow position: | chr17:30204615-30204437 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 75, 9 |
| Conread position: | 209-389 |
| Cow position: | chr17:20507580-20507758 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 20, 32 |
| Conread position: | 211-362 |
| Cow position: | chr17:35991054-35990901 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 211-380 |
| Cow position: | chr17:16117461-16117641 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 212-378 |
| Cow position: | chr17:11381755-11381930 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 14, 157 |
| Conread position: | 212-379 |
| Cow position: | chr17:3471381-3471210 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 16, 94 |
| Conread position: | 212-380 |
| Cow position: | chr17:3095784-3095613 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 70, 28 |
| Conread position: | 212-380 |
| Cow position: | chr17:9293707-9293536 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 212-380 |
| Cow position: | chr17:35232056-35232230 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 14, 96 |
| Conread position: | 212-380 |
| Cow position: | chr17:37414939-37415112 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 6, 153 |
| Conread position: | 213-378 |
| Cow position: | chr17:18173848-18174014 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 126 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 13, 144 |
| Conread position: | 213-380 |
| Cow position: | chr17:15450311-15450143 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 70, 116 |
| Conread position: | 213-380 |
| Cow position: | chr17:15985304-15985144 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 70, 12 |
| Conread position: | 213-389 |
| Cow position: | chr17:19237146-19236977 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 168, 54 |
| Conread position: | 215-375 |
| Cow position: | chr17:30329648-30329487 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 68, 146 |
| Conread position: | 218-369 |
| Cow position: | chr17:26224472-26224317 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 24, 147 |
| Conread position: | 218-380 |
| Cow position: | chr17:26084984-26084823 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 65, 140 |
| Conread position: | 223-379 |
| Cow position: | chr17:21755494-21755652 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 63, 6 |
| Conread position: | 226-380 |
| Cow position: | chr17:27274505-27274350 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 16, 134 |
| Conread position: | 226-389 |
| Cow position: | chr17:30999715-30999555 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 125 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 47, 43 |
| Conread position: | 226-391 |
| Cow position: | chr17:3781987-3781820 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 227-344 |
| Cow position: | chr17:20269543-20269425 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 93 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 227-360 |
| Cow position: | chr17:20337732-20337596 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 227-380 |
| Cow position: | chr17:16448277-16448121 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 20, 124 |
| Conread position: | 227-380 |
| Cow position: | chr17:17406080-17405926 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 39, 57 |
| Conread position: | 227-380 |
| Cow position: | chr17:24553950-24553792 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 16, 136 |
| Conread position: | 227-390 |
| Cow position: | chr17:34316765-34316930 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 56, 19 |
| Conread position: | 228-386 |
| Cow position: | chr17:8644980-8644819 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 55, 97 |
| Conread position: | 229-388 |
| Cow position: | chr17:11056431-11056595 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 231-369 |
| Cow position: | chr17:33370273-33370412 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 56, 130 |
| Conread position: | 231-378 |
| Cow position: | chr17:41995734-41995582 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 52, 122 |
| Conread position: | 231-379 |
| Cow position: | chr17:7890242-7890390 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 124 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 52, 127 |
| Conread position: | 231-380 |
| Cow position: | chr17:36331028-36331178 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 52, 98 |
| Conread position: | 231-389 |
| Cow position: | chr17:13236787-13236947 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 52, 131 |
| Conread position: | 231-389 |
| Cow position: | chr17:30413977-30413815 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 56, 133 |
| Conread position: | 231-389 |
| Cow position: | chr17:34017027-34017189 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 7, 134 |
| Conread position: | 232-388 |
| Cow position: | chr17:5747857-5748020 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 126 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 51, 135 |
| Conread position: | 232-389 |
| Cow position: | chr17:8066998-8067153 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 51, 8 |
| Conread position: | 235-380 |
| Cow position: | chr17:33294349-33294493 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 48, 129 |
| Conread position: | 236-390 |
| Cow position: | chr17:17274152-17274310 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 47, 128 |
| Conread position: | 237-379 |
| Cow position: | chr17:9057034-9057177 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 240-380 |
| Cow position: | chr17:7423513-7423653 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 43, 120 |
| Conread position: | 240-380 |
| Cow position: | chr17:12350002-12350146 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 43, 123 |
| Conread position: | 242-380 |
| Cow position: | chr17:18618198-18618063 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 109 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 41, 71 |
| Conread position: | 246-389 |
| Cow position: | chr17:15376244-15376102 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 113, 0 |
Show alignments to all cow chromosomes.