Cow genome map
| Conread name: | rmgm01_b12.y1 |
| Conread position: | 7-160 |
| Cow position: | chr21:23397442-23397594 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 45, 67 |
| Conread position: | 17-379 |
| Cow position: | chr21:32665599-32665960 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 252 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 86, 51 |
| Conread position: | 49-389 |
| Cow position: | chr21:5419010-5418662 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 30, 11 |
| Conread position: | 91-379 |
| Cow position: | chr21:33263951-33263660 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 204 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 18, 33 |
| Conread position: | 92-386 |
| Cow position: | chr21:41430162-41429869 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 201 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 23, 49 |
| Conread position: | 114-380 |
| Cow position: | chr21:4775259-4774994 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 29, 57 |
| Conread position: | 114-381 |
| Cow position: | chr21:13277383-13277107 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 193 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 45, 213 |
| Conread position: | 135-375 |
| Cow position: | chr21:33955739-33955502 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 83, 72 |
| Conread position: | 135-378 |
| Cow position: | chr21:41458369-41458626 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 179 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 71, 191 |
| Conread position: | 136-380 |
| Cow position: | chr21:24081794-24082038 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 14, 96 |
| Conread position: | 140-380 |
| Cow position: | chr21:24698540-24698300 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 170 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 34, 104 |
| Conread position: | 142-380 |
| Cow position: | chr21:32205962-32205729 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 167 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 145, 28 |
| Conread position: | 146-380 |
| Cow position: | chr21:42913689-42913935 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 16, 91 |
| Conread position: | 147-380 |
| Cow position: | chr21:37646516-37646752 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 21, 80 |
| Conread position: | 150-380 |
| Cow position: | chr21:37352379-37352612 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 18, 94 |
| Conread position: | 151-380 |
| Cow position: | chr21:3813434-3813672 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 45, 218 |
| Conread position: | 151-380 |
| Cow position: | chr21:6618940-6619165 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 11, 46 |
| Conread position: | 151-380 |
| Cow position: | chr21:34390926-34391159 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 45, 21 |
| Conread position: | 151-389 |
| Cow position: | chr21:9416299-9416044 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 178 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 28, 226 |
| Conread position: | 152-368 |
| Cow position: | chr21:19363415-19363641 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 164 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 44, 12 |
| Conread position: | 152-380 |
| Cow position: | chr21:33350786-33350553 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 73, 12 |
| Conread position: | 155-361 |
| Cow position: | chr21:30592261-30592475 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 157-380 |
| Cow position: | chr21:36819168-36819402 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 172 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 23, 11 |
| Conread position: | 159-354 |
| Cow position: | chr21:16981913-16981719 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 147 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 45, 54 |
| Conread position: | 159-388 |
| Cow position: | chr21:2679597-2679355 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 38, 219 |
| Conread position: | 159-389 |
| Cow position: | chr21:35062124-35061890 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 67, 7 |
| Conread position: | 159-389 |
| Cow position: | chr21:44754738-44754978 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 37, 15 |
| Conread position: | 160-389 |
| Cow position: | chr21:12801711-12801942 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 66, 192 |
| Conread position: | 161-373 |
| Cow position: | chr21:44825851-44826061 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 157 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 40, 34 |
| Conread position: | 161-377 |
| Cow position: | chr21:28443336-28443565 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 161-380 |
| Cow position: | chr21:12960861-12961088 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 45, 198 |
| Conread position: | 161-380 |
| Cow position: | chr21:24858352-24858122 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 35, 19 |
| Conread position: | 161-380 |
| Cow position: | chr21:37322266-37322479 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 157 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 43, 123 |
| Conread position: | 161-389 |
| Cow position: | chr21:20910056-20910289 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 35, 146 |
| Conread position: | 165-380 |
| Cow position: | chr21:33210237-33210009 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 31, 15 |
| Conread position: | 165-380 |
| Cow position: | chr21:37941651-37941876 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 30, 177 |
| Conread position: | 167-370 |
| Cow position: | chr21:802274-802473 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 143 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 116, 13 |
| Conread position: | 167-380 |
| Cow position: | chr21:21223319-21223101 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 57, 37 |
| Conread position: | 167-380 |
| Cow position: | chr21:31576529-31576323 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 29, 36 |
| Conread position: | 168-369 |
| Cow position: | chr21:13488555-13488341 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 28, 117 |
| Conread position: | 168-378 |
| Cow position: | chr21:12617169-12616952 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 28, 12 |
| Conread position: | 168-380 |
| Cow position: | chr21:45850679-45850899 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 28, 201 |
| Conread position: | 168-386 |
| Cow position: | chr21:29069297-29069524 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 28, 12 |
| Conread position: | 168-387 |
| Cow position: | chr21:16166610-16166829 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 171 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 109, 134 |
| Conread position: | 168-388 |
| Cow position: | chr21:23786062-23785833 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 25, 6 |
| Conread position: | 168-389 |
| Cow position: | chr21:29247828-29248042 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 60, 48 |
| Conread position: | 169-304 |
| Cow position: | chr21:48282776-48282643 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 29, 62 |
| Conread position: | 171-380 |
| Cow position: | chr21:16612654-16612440 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 25, 120 |
| Conread position: | 171-380 |
| Cow position: | chr21:47760798-47760588 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 25, 12 |
| Conread position: | 171-388 |
| Cow position: | chr21:43357229-43357456 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 168 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 27, 172 |
| Conread position: | 172-379 |
| Cow position: | chr21:27863487-27863707 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 161 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 24, 202 |
| Conread position: | 172-379 |
| Cow position: | chr21:30990250-30990456 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 53, 8 |
| Conread position: | 172-379 |
| Cow position: | chr21:40589456-40589671 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 23, 60 |
| Conread position: | 172-380 |
| Cow position: | chr21:37282331-37282120 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 20, 191 |
| Conread position: | 172-388 |
| Cow position: | chr21:394048-393824 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 24, 196 |
| Conread position: | 173-311 |
| Cow position: | chr21:37886438-37886289 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 120 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 173-378 |
| Cow position: | chr21:23499800-23500008 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 23, 80 |
| Conread position: | 173-380 |
| Cow position: | chr21:20262306-20262523 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 23, 197 |
| Conread position: | 173-387 |
| Cow position: | chr21:29943030-29942810 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 168 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 23, 73 |
| Conread position: | 173-388 |
| Cow position: | chr21:724858-725089 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 23, 203 |
| Conread position: | 173-389 |
| Cow position: | chr21:5426001-5425783 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 23, 174 |
| Conread position: | 174-345 |
| Cow position: | chr21:28989635-28989457 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 175-380 |
| Cow position: | chr21:41040891-41040678 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 45, 23 |
| Conread position: | 176-380 |
| Cow position: | chr21:19062687-19062485 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 155 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 35, 49 |
| Conread position: | 176-388 |
| Cow position: | chr21:44331269-44331482 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 20, 66 |
| Conread position: | 179-388 |
| Cow position: | chr21:4276574-4276791 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 163 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 180-379 |
| Cow position: | chr21:37299479-37299277 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 103, 59 |
| Conread position: | 192-373 |
| Cow position: | chr21:46829265-46829451 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 12, 95 |
| Conread position: | 193-388 |
| Cow position: | chr21:31662467-31662263 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 33, 181 |
| Conread position: | 195-363 |
| Cow position: | chr21:27344407-27344576 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 8, 14 |
| Conread position: | 195-380 |
| Cow position: | chr21:33982810-33982999 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 88, 45 |
| Conread position: | 196-380 |
| Cow position: | chr21:28944366-28944553 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 44, 167 |
| Conread position: | 196-380 |
| Cow position: | chr21:41974376-41974568 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 139 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 33, 172 |
| Conread position: | 196-380 |
| Cow position: | chr21:45473753-45473947 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 196-389 |
| Cow position: | chr21:24888010-24887811 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 43, 171 |
| Conread position: | 196-389 |
| Cow position: | chr21:34739841-34739651 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 15, 51 |
| Conread position: | 196-389 |
| Cow position: | chr21:45330602-45330806 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 149 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 30, 175 |
| Conread position: | 198-357 |
| Cow position: | chr21:28211194-28211029 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 198-378 |
| Cow position: | chr21:39075711-39075896 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 23, 153 |
| Conread position: | 198-380 |
| Cow position: | chr21:18978858-18979034 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 82, 20 |
| Conread position: | 198-380 |
| Cow position: | chr21:21919838-21919652 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 47, 37 |
| Conread position: | 198-380 |
| Cow position: | chr21:26645660-26645840 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 136 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 85, 27 |
| Conread position: | 198-380 |
| Cow position: | chr21:35997171-35996983 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 146 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 198-385 |
| Cow position: | chr21:34565215-34565407 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 28, 167 |
| Conread position: | 198-389 |
| Cow position: | chr21:18378834-18378647 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 85, 18 |
| Conread position: | 199-380 |
| Cow position: | chr21:395866-395687 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 23, 87 |
| Conread position: | 199-380 |
| Cow position: | chr21:8289640-8289830 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 29, 170 |
| Conread position: | 199-380 |
| Cow position: | chr21:28993625-28993815 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 28, 19 |
| Conread position: | 200-389 |
| Cow position: | chr21:18828312-18828507 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 42, 167 |
| Conread position: | 202-361 |
| Cow position: | chr21:7581913-7582081 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 202-380 |
| Cow position: | chr21:33714-33532 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 40, 21 |
| Conread position: | 202-380 |
| Cow position: | chr21:5636725-5636910 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 27, 165 |
| Conread position: | 202-380 |
| Cow position: | chr21:21216150-21216330 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 37, 165 |
| Conread position: | 202-380 |
| Cow position: | chr21:23683541-23683361 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 24, 84 |
| Conread position: | 202-380 |
| Cow position: | chr21:39401587-39401411 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 24, 150 |
| Conread position: | 202-389 |
| Cow position: | chr21:29002165-29002360 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 23, 166 |
| Conread position: | 202-389 |
| Cow position: | chr21:29484972-29484786 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 23, 81 |
| Conread position: | 202-389 |
| Cow position: | chr21:41957183-41957372 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 22, 84 |
| Conread position: | 202-389 |
| Cow position: | chr21:45355829-45355638 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 32, 162 |
| Conread position: | 202-389 |
| Cow position: | chr21:46242244-46242437 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 22, 165 |
| Conread position: | 205-333 |
| Cow position: | chr21:33392047-33391919 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 78, 20 |
| Conread position: | 205-361 |
| Cow position: | chr21:22722487-22722642 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 20, 58 |
| Conread position: | 205-368 |
| Cow position: | chr21:33563004-33562838 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 21, 129 |
| Conread position: | 205-380 |
| Cow position: | chr21:24865148-24864966 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 207-389 |
| Cow position: | chr21:6051495-6051308 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 18, 158 |
| Conread position: | 211-379 |
| Cow position: | chr21:34237371-34237207 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 13, 76 |
| Conread position: | 211-380 |
| Cow position: | chr21:42459558-42459736 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 133 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 13, 157 |
| Conread position: | 212-388 |
| Cow position: | chr21:23478740-23478916 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 71, 133 |
| Conread position: | 213-376 |
| Cow position: | chr21:32928688-32928850 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 70, 35 |
| Conread position: | 218-389 |
| Cow position: | chr21:13256778-13256606 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 65, 143 |
| Conread position: | 219-380 |
| Cow position: | chr21:28907676-28907833 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 64, 8 |
| Conread position: | 220-389 |
| Cow position: | chr21:26742618-26742785 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 63, 7 |
| Conread position: | 222-380 |
| Cow position: | chr21:28029370-28029208 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 61, 142 |
| Conread position: | 223-380 |
| Cow position: | chr21:10107070-10106913 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 120 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 23, 147 |
| Conread position: | 225-380 |
| Cow position: | chr21:31764169-31764325 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 62, 108 |
| Conread position: | 226-380 |
| Cow position: | chr21:23586845-23586687 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 57, 138 |
| Conread position: | 226-380 |
| Cow position: | chr21:38900743-38900584 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 226-388 |
| Cow position: | chr21:33729397-33729236 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 227-360 |
| Cow position: | chr21:38692150-38692019 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 227-369 |
| Cow position: | chr21:35897446-35897304 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 56, 133 |
| Conread position: | 227-370 |
| Cow position: | chr21:37845779-37845927 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 15, 138 |
| Conread position: | 227-374 |
| Cow position: | chr21:1511033-1510890 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 227-380 |
| Cow position: | chr21:22860963-22860813 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 227-380 |
| Cow position: | chr21:44671721-44671564 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 117 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 56, 137 |
| Conread position: | 227-388 |
| Cow position: | chr21:3585399-3585553 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 56, 46 |
| Conread position: | 227-388 |
| Cow position: | chr21:20162502-20162338 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 56, 108 |
| Conread position: | 227-388 |
| Cow position: | chr21:36642871-36642710 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 11, 44 |
| Conread position: | 227-389 |
| Cow position: | chr21:11645006-11645167 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 52, 46 |
| Conread position: | 227-389 |
| Cow position: | chr21:13892234-13892082 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 231-380 |
| Cow position: | chr21:12973293-12973442 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 52, 129 |
| Conread position: | 231-380 |
| Cow position: | chr21:16270692-16270543 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 52, 130 |
| Conread position: | 231-380 |
| Cow position: | chr21:24714612-24714464 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 52, 124 |
| Conread position: | 231-389 |
| Cow position: | chr21:14464538-14464379 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 63, 9 |
| Conread position: | 232-380 |
| Cow position: | chr21:46132019-46132167 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 51, 128 |
| Conread position: | 233-380 |
| Cow position: | chr21:8232781-8232926 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 112 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 50, 13 |
| Conread position: | 234-389 |
| Cow position: | chr21:5137533-5137690 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 234-389 |
| Cow position: | chr21:21000074-21000224 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 70, 12 |
| Conread position: | 235-360 |
| Cow position: | chr21:2874748-2874869 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 101 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 48, 64 |
| Conread position: | 237-378 |
| Cow position: | chr21:12765328-12765190 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 46, 103 |
| Conread position: | 240-388 |
| Cow position: | chr21:19258780-19258629 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 42, 123 |
| Conread position: | 240-388 |
| Cow position: | chr21:31278729-31278582 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 34, 42 |
Show alignments to all cow chromosomes.