Cow genome map

Conread name: rmgm01_b12.y1

Conread position: 2-375
Cow position: chr6:28079708-28080105 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 260
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 20, 58

Conread position: 2-380
Cow position: chr6:48806804-48807212 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 283
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 100, 66

Conread position: 7-379
Cow position: chr6:7824946-7824551 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 268
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 53, 73

Conread position: 7-380
Cow position: chr6:20255207-20255599 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 264
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 85, 61

Conread position: 7-389
Cow position: chr6:11790175-11789777 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 273
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 95, 61

Conread position: 17-387
Cow position: chr6:1907709-1907319 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 275
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 83, 51

Conread position: 27-362
Cow position: chr6:10237513-10237175 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 236
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 76, 41

Conread position: 27-380
Cow position: chr6:29412609-29412974 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 244
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 76, 41

Conread position: 50-389
Cow position: chr6:17090726-17090377 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 237
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 41, 16

Conread position: 53-389
Cow position: chr6:6596698-6596360 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 231
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 21, 88

Conread position: 78-379
Cow position: chr6:38899640-38899968 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 227
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 25, 35

Conread position: 81-369
Cow position: chr6:16219937-16220228 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 208
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 25, 8

Conread position: 94-380
Cow position: chr6:40032270-40031981 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 203
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 12, 21

Conread position: 94-389
Cow position: chr6:44869056-44869351 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 202
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 73, 92

Conread position: 102-380
Cow position: chr6:38895006-38895288 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 206
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 15, 9

Conread position: 105-350
Cow position: chr6:48654999-48655251 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 182
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 34, 49

Conread position: 109-380
Cow position: chr6:23003359-23003620 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 187
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 23, 87

Conread position: 114-370
Cow position: chr6:12516217-12515943 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 190
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 26, 265

Conread position: 114-379
Cow position: chr6:52188767-52189034 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 178
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 26, 92

Conread position: 129-386
Cow position: chr6:58074097-58073826 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 206
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 10, 18

Conread position: 134-380
Cow position: chr6:52002402-52002156 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 176
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 5, 23

Conread position: 135-380
Cow position: chr6:16597449-16597204 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 172
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 41, 18

Conread position: 136-390
Cow position: chr6:20420398-20420150 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 176
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 103, 27

Conread position: 137-350
Cow position: chr6:24004574-24004364 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 150
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 89, 9

Conread position: 137-362
Cow position: chr6:30075855-30076081 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 157
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 110, 41

Conread position: 137-373
Cow position: chr6:38641535-38641292 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 178
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 36, 8

Conread position: 140-350
Cow position: chr6:1703854-1703630 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 158
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 18, 26

Conread position: 144-376
Cow position: chr6:15242866-15242625 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 171
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 28, 15

Conread position: 146-378
Cow position: chr6:57164459-57164219 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 176
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 33, 171

Conread position: 151-380
Cow position: chr6:44078543-44078309 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 170
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 11, 22

Conread position: 151-380
Cow position: chr6:48344356-48344115 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 176
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 45, 15

Conread position: 157-378
Cow position: chr6:38018280-38018063 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 157
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 64, 131

Conread position: 157-380
Cow position: chr6:6188255-6188042 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 161
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 17, 50

Conread position: 157-386
Cow position: chr6:59301806-59302045 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 142
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 69, 212

Conread position: 158-380
Cow position: chr6:15922980-15923210 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 165
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 38, 208

Conread position: 158-380
Cow position: chr6:48282012-48281782 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 167
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 14, 44

Conread position: 158-388
Cow position: chr6:36196230-36195993 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 169
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 38, 22

Conread position: 159-357
Cow position: chr6:42566873-42566677 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 144
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 15, 148

Conread position: 159-380
Cow position: chr6:17669311-17669097 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 169
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 37, 15

Conread position: 159-380
Cow position: chr6:54132830-54132605 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 158
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 9, 146

Conread position: 160-370
Cow position: chr6:47327050-47327271 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 159
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 36, 11

Conread position: 160-375
Cow position: chr6:21231542-21231329 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 157
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 29, 116

Conread position: 160-380
Cow position: chr6:12623480-12623258 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 155
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 68, 20

Conread position: 161-350
Cow position: chr6:57680414-57680619 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 151
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 38, 0

Conread position: 161-374
Cow position: chr6:4079371-4079590 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 163
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 34, 210

Conread position: 165-380
Cow position: chr6:24962153-24961932 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 158
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 70, 15

Conread position: 165-389
Cow position: chr6:1889078-1889303 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 171
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 8, 16

Conread position: 166-380
Cow position: chr6:5609436-5609653 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 152
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 30, 14

Conread position: 167-380
Cow position: chr6:9323158-9322946 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 154
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 116, 13

Conread position: 167-386
Cow position: chr6:65871039-65870805 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 171
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 29, 7

Conread position: 168-353
Cow position: chr6:16634208-16634407 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 142
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 168-366
Cow position: chr6:62327150-62326945 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 144
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 26, 85

Conread position: 168-378
Cow position: chr6:17414441-17414664 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 160
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 29, 12

Conread position: 168-379
Cow position: chr6:24515188-24515405 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 159
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 29, 198

Conread position: 168-379
Cow position: chr6:55935972-55936188 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 170
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 37, 78

Conread position: 168-380
Cow position: chr6:31535562-31535783 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 155
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 28, 193

Conread position: 168-388
Cow position: chr6:57118930-57119149 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 169
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 26, 122

Conread position: 168-389
Cow position: chr6:9452765-9452991 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 165
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 28, 12

Conread position: 168-389
Cow position: chr6:36202827-36202606 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 152
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 119, 192

Conread position: 168-389
Cow position: chr6:60930889-60931122 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 174
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 26, 107

Conread position: 169-380
Cow position: chr6:51071711-51071497 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 156
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 5, 146

Conread position: 171-380
Cow position: chr6:45690599-45690806 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 153
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 111, 9

Conread position: 171-388
Cow position: chr6:45617430-45617661 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 166
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 17, 88

Conread position: 172-357
Cow position: chr6:607265-607071 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 137
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 172-380
Cow position: chr6:64431940-64431726 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 150
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 24, 194

Conread position: 172-389
Cow position: chr6:27710657-27710433 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 156
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 58, 195

Conread position: 173-380
Cow position: chr6:130159-130377 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 166
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 21, 199

Conread position: 173-380
Cow position: chr6:24649856-24649635 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 163
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 24, 202

Conread position: 173-380
Cow position: chr6:35415514-35415734 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 162
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 23, 177

Conread position: 173-380
Cow position: chr6:63406675-63406465 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 152
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 24, 156

Conread position: 173-389
Cow position: chr6:6994950-6995166 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 162
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 23, 74

Conread position: 173-389
Cow position: chr6:32121909-32121689 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 161
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 52, 190

Conread position: 173-389
Cow position: chr6:34549403-34549193 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 159
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 47, 33

Conread position: 173-391
Cow position: chr6:8318159-8318390 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 179
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 23, 188

Conread position: 174-377
Cow position: chr6:10423169-10422964 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 158
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 21, 48

Conread position: 175-380
Cow position: chr6:13040453-13040239 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 152
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 21, 0

Conread position: 176-380
Cow position: chr6:68112499-68112699 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 150
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 111, 7

Conread position: 176-389
Cow position: chr6:3017449-3017227 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 162
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 20, 185

Conread position: 190-380
Cow position: chr6:2013002-2012806 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 143
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 14, 176

Conread position: 193-377
Cow position: chr6:12652186-12651994 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 141
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 31, 0

Conread position: 193-389
Cow position: chr6:56902841-56902642 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 156
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 32, 39

Conread position: 193-389
Cow position: chr6:59508334-59508130 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 146
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 29, 176

Conread position: 195-380
Cow position: chr6:62324969-62324777 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 133
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 196-370
Cow position: chr6:14658577-14658404 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 131
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 30, 45

Conread position: 196-379
Cow position: chr6:28084041-28084228 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 140
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 87, 20

Conread position: 196-380
Cow position: chr6:3929293-3929108 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 136
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 29, 100

Conread position: 196-380
Cow position: chr6:12387348-12387536 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 144
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 30, 162

Conread position: 196-380
Cow position: chr6:16625916-16625735 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 137
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 87, 26

Conread position: 196-380
Cow position: chr6:24327164-24327348 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 142
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 9, 102

Conread position: 196-389
Cow position: chr6:30474298-30474109 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 146
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 30, 70

Conread position: 196-390
Cow position: chr6:6731244-6731041 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 145
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 30, 116

Conread position: 197-380
Cow position: chr6:56376377-56376560 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 145
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 29, 102

Conread position: 198-335
Cow position: chr6:37739162-37739017 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 28, 0

Conread position: 198-362
Cow position: chr6:24545584-24545421 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 124
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 28, 78

Conread position: 198-362
Cow position: chr6:33917878-33918047 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 133
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 85, 0

Conread position: 198-369
Cow position: chr6:1886691-1886865 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 129
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 24, 106

Conread position: 198-377
Cow position: chr6:22969055-22968867 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 140
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 29, 171

Conread position: 198-380
Cow position: chr6:2582844-2582662 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 140
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 28, 162

Conread position: 198-380
Cow position: chr6:38207518-38207708 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 139
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 28, 171

Conread position: 198-380
Cow position: chr6:54807202-54807010 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 146
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 28, 172

Conread position: 198-388
Cow position: chr6:47624989-47625180 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 151
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 27, 124

Conread position: 198-389
Cow position: chr6:9026491-9026295 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 151
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 28, 167

Conread position: 198-389
Cow position: chr6:22863435-22863622 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 139
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 27, 33

Conread position: 198-389
Cow position: chr6:52401833-52401639 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 147
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 27, 90

Conread position: 199-380
Cow position: chr6:24652222-24652396 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 130
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 47, 26

Conread position: 199-388
Cow position: chr6:19427426-19427228 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 150
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 27, 170

Conread position: 199-388
Cow position: chr6:45160322-45160512 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 141
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 27, 83

Conread position: 199-391
Cow position: chr6:58316019-58315825 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 140
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 27, 163

Conread position: 200-380
Cow position: chr6:3719038-3719221 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 138
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 87, 22

Conread position: 202-350
Cow position: chr6:32677115-32677264 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 110
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 24, 39

Conread position: 202-373
Cow position: chr6:6098314-6098488 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 132
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 21, 74

Conread position: 202-377
Cow position: chr6:46667081-46666894 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 140
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 24, 133

Conread position: 202-379
Cow position: chr6:52556506-52556686 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 138
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 14, 146

Conread position: 202-380
Cow position: chr6:8637244-8637062 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 133
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 23, 167

Conread position: 202-380
Cow position: chr6:23695963-23695785 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 139
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 23, 80

Conread position: 202-380
Cow position: chr6:24781587-24781776 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 140
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 23, 169

Conread position: 202-380
Cow position: chr6:32210659-32210839 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 134
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 23, 102

Conread position: 202-380
Cow position: chr6:35471550-35471739 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 137
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 23, 169

Conread position: 202-380
Cow position: chr6:47540500-47540313 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 148
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 20, 167

Conread position: 202-380
Cow position: chr6:55366347-55366536 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 150
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 24, 0

Conread position: 202-380
Cow position: chr6:64449361-64449179 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 139
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 24, 135

Conread position: 202-380
Cow position: chr6:66453769-66453588 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 134
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 9, 84

Conread position: 202-387
Cow position: chr6:10605657-10605465 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 135
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 42, 165

Conread position: 202-388
Cow position: chr6:9008642-9008832 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 139
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 24, 162

Conread position: 202-388
Cow position: chr6:12551237-12551047 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 137
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 26, 119

Conread position: 202-388
Cow position: chr6:57686123-57685938 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 140
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 123, 79

Conread position: 202-389
Cow position: chr6:10106022-10106218 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 147
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 23, 173

Conread position: 202-389
Cow position: chr6:28477147-28476960 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 144
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 22, 84

Conread position: 202-389
Cow position: chr6:50746956-50746759 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 146
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 23, 136

Conread position: 205-377
Cow position: chr6:20261290-20261123 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 126
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 78, 26

Conread position: 205-378
Cow position: chr6:13717810-13717641 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 130
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 19, 77

Conread position: 205-379
Cow position: chr6:10705802-10705984 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 134
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 17, 0

Conread position: 205-380
Cow position: chr6:10695833-10695656 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 136
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 78, 139

Conread position: 205-380
Cow position: chr6:28164759-28164582 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 132
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 78, 41

Conread position: 205-380
Cow position: chr6:35181292-35181466 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 22, 72

Conread position: 205-380
Cow position: chr6:36928621-36928439 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 133
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 21, 162

Conread position: 205-380
Cow position: chr6:54368932-54369112 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 136
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 23, 161

Conread position: 205-389
Cow position: chr6:39994495-39994683 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 141
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 78, 159

Conread position: 206-380
Cow position: chr6:2607580-2607400 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 134
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 21, 44

Conread position: 206-380
Cow position: chr6:60350330-60350512 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 136
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 19, 162

Conread position: 207-378
Cow position: chr6:58439929-58439756 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 127
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 68, 19

Conread position: 207-386
Cow position: chr6:42961396-42961586 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 141
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 19, 164

Conread position: 208-362
Cow position: chr6:27870734-27870579 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 119
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 70, 8

Conread position: 208-380
Cow position: chr6:3374611-3374782 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 142
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 75, 8

Conread position: 209-368
Cow position: chr6:38594542-38594705 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 126
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 23, 155

Conread position: 209-389
Cow position: chr6:20172179-20171999 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 139
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 74, 7

Conread position: 212-369
Cow position: chr6:31688433-31688585 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 121
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 35, 13

Conread position: 212-376
Cow position: chr6:57474335-57474171 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 123
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 33, 80

Conread position: 212-378
Cow position: chr6:68297629-68297798 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 122
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 73, 150

Conread position: 212-380
Cow position: chr6:29239899-29239730 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 131
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 14, 83

Conread position: 213-384
Cow position: chr6:15782568-15782740 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 135
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 29, 56

Conread position: 213-389
Cow position: chr6:11465932-11466112 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 131
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 70, 0

Conread position: 214-368
Cow position: chr6:1914572-1914416 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 122
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 69, 9

Conread position: 214-380
Cow position: chr6:39092459-39092302 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 58, 0

Conread position: 218-362
Cow position: chr6:11160057-11160205 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 110
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 64, 0

Conread position: 218-377
Cow position: chr6:44377217-44377056 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 135
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 65, 98

Conread position: 218-380
Cow position: chr6:29077678-29077516 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 138
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 65, 142

Conread position: 218-380
Cow position: chr6:40137110-40137278 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 128
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 13, 142

Conread position: 218-380
Cow position: chr6:60152985-60152823 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 126
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 65, 142

Conread position: 218-389
Cow position: chr6:51191774-51191593 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 142
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 38, 152

Conread position: 219-379
Cow position: chr6:1467810-1467973 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 121
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 63, 21

Conread position: 219-379
Cow position: chr6:25784261-25784101 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 123
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 8, 131

Conread position: 219-380
Cow position: chr6:30315108-30315270 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 125
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 64, 143

Conread position: 219-389
Cow position: chr6:14289390-14289556 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 127
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 63, 0

Conread position: 220-389
Cow position: chr6:19440783-19440607 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 131
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 63, 20

Conread position: 223-380
Cow position: chr6:24917762-24917920 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 126
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 9, 140

Conread position: 223-380
Cow position: chr6:49398670-49398829 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 60, 139

Conread position: 223-380
Cow position: chr6:60485635-60485474 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 121
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 60, 8

Conread position: 225-380
Cow position: chr6:20747594-20747438 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 122
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 56, 136

Conread position: 226-332
Cow position: chr6:52705775-52705883 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 88
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 226-379
Cow position: chr6:34235493-34235645 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 121
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 56, 68

Conread position: 226-380
Cow position: chr6:21869707-21869858 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 50, 0

Conread position: 226-380
Cow position: chr6:35769541-35769695 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 120
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 61, 134

Conread position: 227-357
Cow position: chr6:37603463-37603332 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 99
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 56, 0

Conread position: 227-378
Cow position: chr6:34196210-34196359 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 110
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 61, 0

Conread position: 227-379
Cow position: chr6:59069684-59069840 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 118
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 56, 137

Conread position: 227-380
Cow position: chr6:12845252-12845104 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 118
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 10, 57

Conread position: 227-380
Cow position: chr6:53460632-53460784 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 115
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 56, 133

Conread position: 227-388
Cow position: chr6:12934199-12934361 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 123
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 75, 61

Conread position: 227-388
Cow position: chr6:22986049-22986210 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 126
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 56, 31

Conread position: 227-390
Cow position: chr6:21184898-21184733 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 119
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 42, 135

Conread position: 228-389
Cow position: chr6:18977566-18977402 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 49, 140

Conread position: 229-381
Cow position: chr6:14958407-14958562 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 117
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 51, 135

Conread position: 231-388
Cow position: chr6:13741631-13741475 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 52, 116

Conread position: 231-388
Cow position: chr6:47150716-47150558 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 115
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 7, 130

Conread position: 231-389
Cow position: chr6:7253486-7253648 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 125
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 52, 133

Conread position: 234-389
Cow position: chr6:64436394-64436552 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 49, 76

Conread position: 235-379
Cow position: chr6:21311822-21311970 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 112
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 48, 129

Conread position: 240-369
Cow position: chr6:55475173-55475044 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 105
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 43, 118

Conread position: 240-380
Cow position: chr6:12739509-12739368 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 43, 108

Conread position: 240-389
Cow position: chr6:54479577-54479429 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 120
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 43, 94

Conread position: 241-380
Cow position: chr6:2404853-2404989 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 110
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 46, 111

Conread position: 241-380
Cow position: chr6:25773457-25773594 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 106
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 41, 0

Conread position: 242-380
Cow position: chr6:38987750-38987888 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 106
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 41, 118

Conread position: 245-390
Cow position: chr6:10225761-10225899 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 247-383
Cow position: chr6:33311394-33311256 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 113
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 40, 116

Conread position: 256-377
Cow position: chr6:18574409-18574532 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 102
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 27, 62

Show alignments to all cow chromosomes.