Non-Coding RNA Search

Cow genome map


           Conread name:
           rmgm01_b12.y1
        

               Conread position:
               4-370
               

               Cow position:
               chr9:61847267-61846878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               392
               

               Alignm identity:
               255
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               47, 119
               

               Conread position:
               6-388
               

               Cow position:
               chr9:35100757-35101157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               406
               

               Alignm identity:
               274
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               9, 63
               

               Conread position:
               17-389
               

               Cow position:
               chr9:5059435-5059076 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               253
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               86, 50
               

               Conread position:
               17-389
               

               Cow position:
               chr9:11102920-11102532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               402
               

               Alignm identity:
               268
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               86, 51
               

               Conread position:
               22-380
               

               Cow position:
               chr9:34568826-34568472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               253
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               21, 40
               

               Conread position:
               51-388
               

               Cow position:
               chr9:15053831-15054168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               224
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               57, 17
               

               Conread position:
               79-311
               

               Cow position:
               chr9:31886444-31886201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               179
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               29, 10
               

               Conread position:
               87-380
               

               Cow position:
               chr9:30138115-30138407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               16, 49
               

               Conread position:
               94-380
               

               Cow position:
               chr9:50544647-50544351 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               206
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               18, 55
               

               Conread position:
               94-391
               

               Cow position:
               chr9:25958406-25958706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               43, 12
               

               Conread position:
               97-361
               

               Cow position:
               chr9:36827127-36827389 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               33, 9
               

               Conread position:
               114-378
               

               Cow position:
               chr9:10355560-10355279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               68, 216
               

               Conread position:
               120-367
               

               Cow position:
               chr9:10112035-10111779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               20, 127
               

               Conread position:
               128-361
               

               Cow position:
               chr9:42956394-42956625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               155, 70
               

               Conread position:
               128-380
               

               Cow position:
               chr9:3582917-3582664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               56, 40
               

               Conread position:
               130-388
               

               Cow position:
               chr9:24886587-24886333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               48, 54
               

               Conread position:
               133-314
               

               Cow position:
               chr9:23107974-23107789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               130
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               136-388
               

               Cow position:
               chr9:10118638-10118373 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               137-338
               

               Cow position:
               chr9:48773374-48773582 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               40, 152
               

               Conread position:
               149-378
               

               Cow position:
               chr9:41513666-41513899 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               169
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               47, 18
               

               Conread position:
               151-378
               

               Cow position:
               chr9:22114593-22114353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               17, 146
               

               Conread position:
               151-379
               

               Cow position:
               chr9:38343931-38344176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               151-380
               

               Cow position:
               chr9:22318394-22318620 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               45, 21
               

               Conread position:
               151-380
               

               Cow position:
               chr9:29185093-29184852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               11, 221
               

               Conread position:
               151-380
               

               Cow position:
               chr9:34468534-34468311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               169
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               88, 8
               

               Conread position:
               151-388
               

               Cow position:
               chr9:1952226-1951980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               174
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               45, 219
               

               Conread position:
               151-389
               

               Cow position:
               chr9:49403803-49404045 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               45, 29
               

               Conread position:
               154-363
               

               Cow position:
               chr9:3932007-3932233 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               157-389
               

               Cow position:
               chr9:60459238-60459465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               39, 14
               

               Conread position:
               158-363
               

               Cow position:
               chr9:5053182-5052973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               156
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               38, 13
               

               Conread position:
               158-374
               

               Cow position:
               chr9:4285214-4284998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               157
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               125, 134
               

               Conread position:
               158-380
               

               Cow position:
               chr9:7634323-7634550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               38, 129
               

               Conread position:
               158-388
               

               Cow position:
               chr9:34310077-34310324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               181
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               16, 8
               

               Conread position:
               159-388
               

               Cow position:
               chr9:39152628-39152397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               34, 166
               

               Conread position:
               160-379
               

               Cow position:
               chr9:8998408-8998636 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               29, 131
               

               Conread position:
               160-380
               

               Cow position:
               chr9:5227119-5226883 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               170
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               36, 217
               

               Conread position:
               160-380
               

               Cow position:
               chr9:8599655-8599885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               45, 210
               

               Conread position:
               160-380
               

               Cow position:
               chr9:23388624-23388394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               38, 21
               

               Conread position:
               160-380
               

               Cow position:
               chr9:43037537-43037765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               174
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               5, 15
               

               Conread position:
               160-389
               

               Cow position:
               chr9:21674939-21674694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               62, 11
               

               Conread position:
               160-389
               

               Cow position:
               chr9:34762795-34762562 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               172
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               36, 14
               

               Conread position:
               161-363
               

               Cow position:
               chr9:52725161-52724950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               33, 19
               

               Conread position:
               161-389
               

               Cow position:
               chr9:17740888-17740652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               164
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               40, 19
               

               Conread position:
               161-390
               

               Cow position:
               chr9:60037705-60037947 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               13, 212
               

               Conread position:
               165-379
               

               Cow position:
               chr9:8779180-8778956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               31, 9
               

               Conread position:
               165-380
               

               Cow position:
               chr9:23027861-23028074 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               151
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               30, 125
               

               Conread position:
               166-380
               

               Cow position:
               chr9:34957993-34957770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               30, 5
               

               Conread position:
               167-362
               

               Cow position:
               chr9:2113946-2113738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               167-370
               

               Cow position:
               chr9:55118144-55118350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               72, 131
               

               Conread position:
               167-374
               

               Cow position:
               chr9:26828762-26828545 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               36, 29
               

               Conread position:
               167-379
               

               Cow position:
               chr9:51204789-51205002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               13, 38
               

               Conread position:
               167-380
               

               Cow position:
               chr9:5071542-5071331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               22, 107
               

               Conread position:
               167-385
               

               Cow position:
               chr9:214406-214178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               16, 203
               

               Conread position:
               167-389
               

               Cow position:
               chr9:55651094-55651313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               57, 117
               

               Conread position:
               168-336
               

               Cow position:
               chr9:15006690-15006512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               168-363
               

               Cow position:
               chr9:8546381-8546584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               28, 12
               

               Conread position:
               168-380
               

               Cow position:
               chr9:28773182-28773399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               28, 13
               

               Conread position:
               168-380
               

               Cow position:
               chr9:41958736-41958513 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               37, 202
               

               Conread position:
               168-388
               

               Cow position:
               chr9:22361072-22361304 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               10, 198
               

               Conread position:
               168-389
               

               Cow position:
               chr9:47875894-47875657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               28, 11
               

               Conread position:
               169-368
               

               Cow position:
               chr9:10678269-10678474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               152
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               28, 120
               

               Conread position:
               169-380
               

               Cow position:
               chr9:14853389-14853172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               154
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               27, 139
               

               Conread position:
               170-380
               

               Cow position:
               chr9:56898152-56898371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               26, 197
               

               Conread position:
               171-311
               

               Cow position:
               chr9:27310692-27310551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               113
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               25, 82
               

               Conread position:
               171-363
               

               Cow position:
               chr9:23431081-23430876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               171-370
               

               Cow position:
               chr9:9200660-9200453 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               156
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               27, 202
               

               Conread position:
               171-378
               

               Cow position:
               chr9:36490829-36490615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               152
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               24, 127
               

               Conread position:
               171-380
               

               Cow position:
               chr9:4928691-4928911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               26, 8
               

               Conread position:
               171-389
               

               Cow position:
               chr9:21460087-21459866 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               26, 9
               

               Conread position:
               171-389
               

               Cow position:
               chr9:26279109-26278886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               162
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               25, 74
               

               Conread position:
               172-363
               

               Cow position:
               chr9:41995773-41995980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               172-370
               

               Cow position:
               chr9:47869074-47869278 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               17, 195
               

               Conread position:
               172-374
               

               Cow position:
               chr9:42998404-42998195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               24, 152
               

               Conread position:
               172-380
               

               Cow position:
               chr9:6879836-6880052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               54, 196
               

               Conread position:
               172-380
               

               Cow position:
               chr9:35849967-35850180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               24, 194
               

               Conread position:
               172-388
               

               Cow position:
               chr9:58133955-58133734 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               155
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               56, 191
               

               Conread position:
               173-355
               

               Cow position:
               chr9:13845805-13845993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               21, 133
               

               Conread position:
               173-374
               

               Cow position:
               chr9:19382393-19382598 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               23, 127
               

               Conread position:
               173-378
               

               Cow position:
               chr9:58204729-58204943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               23, 197
               

               Conread position:
               173-379
               

               Cow position:
               chr9:59924608-59924822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               20, 198
               

               Conread position:
               173-380
               

               Cow position:
               chr9:20039069-20038879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               151
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               43, 34
               

               Conread position:
               173-380
               

               Cow position:
               chr9:54924686-54924908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               23, 202
               

               Conread position:
               173-387
               

               Cow position:
               chr9:43911995-43912218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               31, 86
               

               Conread position:
               173-388
               

               Cow position:
               chr9:9956891-9957110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               165
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               27, 100
               

               Conread position:
               175-380
               

               Cow position:
               chr9:5621968-5621748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               169
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               21, 200
               

               Conread position:
               175-380
               

               Cow position:
               chr9:11299624-11299415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               22, 117
               

               Conread position:
               175-388
               

               Cow position:
               chr9:56453401-56453624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               17, 5
               

               Conread position:
               176-380
               

               Cow position:
               chr9:38385801-38385587 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               176-388
               

               Cow position:
               chr9:20091115-20091328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               21, 110
               

               Conread position:
               177-389
               

               Cow position:
               chr9:16980968-16981180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               39, 19
               

               Conread position:
               179-389
               

               Cow position:
               chr9:34070802-34070594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               41, 13
               

               Conread position:
               193-380
               

               Cow position:
               chr9:52787448-52787254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               148
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               196-367
               

               Cow position:
               chr9:9490884-9491062 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               30, 107
               

               Conread position:
               196-379
               

               Cow position:
               chr9:3169427-3169240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               143
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               30, 167
               

               Conread position:
               196-379
               

               Cow position:
               chr9:5509815-5510005 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               29, 171
               

               Conread position:
               196-380
               

               Cow position:
               chr9:12183848-12184028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               98, 20
               

               Conread position:
               196-380
               

               Cow position:
               chr9:12355949-12356138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               38, 167
               

               Conread position:
               196-380
               

               Cow position:
               chr9:37099138-37098952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               20, 167
               

               Conread position:
               196-380
               

               Cow position:
               chr9:46316690-46316506 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               27, 88
               

               Conread position:
               196-387
               

               Cow position:
               chr9:41781990-41782184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               147
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               29, 167
               

               Conread position:
               196-388
               

               Cow position:
               chr9:9416311-9416117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               146
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               30, 96
               

               Conread position:
               196-389
               

               Cow position:
               chr9:27052246-27052042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               7, 175
               

               Conread position:
               196-389
               

               Cow position:
               chr9:44217853-44218052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               30, 171
               

               Conread position:
               197-388
               

               Cow position:
               chr9:4861482-4861679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               27, 172
               

               Conread position:
               198-362
               

               Cow position:
               chr9:23527691-23527532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               84, 16
               

               Conread position:
               198-362
               

               Cow position:
               chr9:25502448-25502273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               198-364
               

               Cow position:
               chr9:29108633-29108804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               134
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               26, 128
               

               Conread position:
               198-374
               

               Cow position:
               chr9:16745771-16745953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               27, 140
               

               Conread position:
               198-376
               

               Cow position:
               chr9:19637540-19637361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               140
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               28, 94
               

               Conread position:
               198-379
               

               Cow position:
               chr9:2910219-2910399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               66, 32
               

               Conread position:
               198-379
               

               Cow position:
               chr9:15951057-15950874 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               85, 25
               

               Conread position:
               198-379
               

               Cow position:
               chr9:24850338-24850524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               133
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               28, 167
               

               Conread position:
               198-379
               

               Cow position:
               chr9:32625103-32625279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               142
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               29, 85
               

               Conread position:
               198-379
               

               Cow position:
               chr9:58669470-58669660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               23, 162
               

               Conread position:
               198-380
               

               Cow position:
               chr9:5029608-5029797 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               28, 169
               

               Conread position:
               198-380
               

               Cow position:
               chr9:32812440-32812628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               28, 170
               

               Conread position:
               198-388
               

               Cow position:
               chr9:55084202-55084007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               43, 167
               

               Conread position:
               199-380
               

               Cow position:
               chr9:44709921-44710103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               26, 135
               

               Conread position:
               199-387
               

               Cow position:
               chr9:24399585-24399399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               82, 160
               

               Conread position:
               202-350
               

               Cow position:
               chr9:5209680-5209836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               22, 153
               

               Conread position:
               202-367
               

               Cow position:
               chr9:28947954-28948121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               127
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               23, 158
               

               Conread position:
               202-374
               

               Cow position:
               chr9:8288717-8288894 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               202-379
               

               Cow position:
               chr9:37069470-37069288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               24, 163
               

               Conread position:
               202-380
               

               Cow position:
               chr9:36445728-36445903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               81, 27
               

               Conread position:
               202-380
               

               Cow position:
               chr9:41679845-41680016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               23, 84
               

               Conread position:
               202-380
               

               Cow position:
               chr9:52505211-52505021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               24, 170
               

               Conread position:
               202-380
               

               Cow position:
               chr9:61997500-61997314 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               24, 167
               

               Conread position:
               202-388
               

               Cow position:
               chr9:22227983-22227795 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               26, 84
               

               Conread position:
               202-388
               

               Cow position:
               chr9:24887299-24887487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               23, 67
               

               Conread position:
               202-389
               

               Cow position:
               chr9:3070321-3070132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               23, 83
               

               Conread position:
               204-362
               

               Cow position:
               chr9:26556099-26555941 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               20, 63
               

               Conread position:
               204-380
               

               Cow position:
               chr9:33823200-33823373 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               21, 144
               

               Conread position:
               205-379
               

               Cow position:
               chr9:28983287-28983462 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               78, 34
               

               Conread position:
               206-377
               

               Cow position:
               chr9:30749483-30749306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               33, 160
               

               Conread position:
               206-380
               

               Cow position:
               chr9:14961054-14961230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               20, 156
               

               Conread position:
               206-380
               

               Cow position:
               chr9:31587996-31587815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               20, 161
               

               Conread position:
               206-389
               

               Cow position:
               chr9:9325047-9325233 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               134
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               81, 33
               

               Conread position:
               208-346
               

               Cow position:
               chr9:44408152-44408289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               74, 8
               

               Conread position:
               208-380
               

               Cow position:
               chr9:11849619-11849793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               75, 109
               

               Conread position:
               208-380
               

               Cow position:
               chr9:49271246-49271068 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               12, 24
               

               Conread position:
               212-363
               

               Cow position:
               chr9:20839729-20839880 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               71, 53
               

               Conread position:
               212-380
               

               Cow position:
               chr9:417238-417412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               71, 106
               

               Conread position:
               212-380
               

               Cow position:
               chr9:5141194-5141356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               71, 96
               

               Conread position:
               212-380
               

               Cow position:
               chr9:13670742-13670919 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               212-380
               

               Cow position:
               chr9:35368991-35369162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               133
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               71, 57
               

               Conread position:
               213-350
               

               Cow position:
               chr9:38069443-38069306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               16, 10
               

               Conread position:
               213-361
               

               Cow position:
               chr9:39727630-39727776 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               29, 102
               

               Conread position:
               213-374
               

               Cow position:
               chr9:8612398-8612567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               213-380
               

               Cow position:
               chr9:5399832-5399997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               9, 136
               

               Conread position:
               213-389
               

               Cow position:
               chr9:36602305-36602129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               74, 102
               

               Conread position:
               214-380
               

               Cow position:
               chr9:64091800-64091970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               75, 150
               

               Conread position:
               214-389
               

               Cow position:
               chr9:30055989-30056169 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               134
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               8, 105
               

               Conread position:
               218-362
               

               Cow position:
               chr9:28706081-28705940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               218-389
               

               Cow position:
               chr9:19267044-19266874 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               65, 141
               

               Conread position:
               218-389
               

               Cow position:
               chr9:38692422-38692247 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               63, 146
               

               Conread position:
               219-370
               

               Cow position:
               chr9:47547634-47547482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               145, 28
               

               Conread position:
               220-389
               

               Cow position:
               chr9:25464961-25464794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               123
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               63, 108
               

               Conread position:
               221-389
               

               Cow position:
               chr9:41317844-41317678 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               130
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               62, 139
               

               Conread position:
               222-380
               

               Cow position:
               chr9:29808586-29808747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               225-380
               

               Cow position:
               chr9:55262452-55262301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               118
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               58, 128
               

               Conread position:
               225-389
               

               Cow position:
               chr9:5340761-5340923 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               130
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               57, 10
               

               Conread position:
               226-355
               

               Cow position:
               chr9:44552876-44553005 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               102
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               57, 14
               

               Conread position:
               226-380
               

               Cow position:
               chr9:59795155-59794998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               57, 109
               

               Conread position:
               226-389
               

               Cow position:
               chr9:40060203-40060034 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               129
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               227-360
               

               Cow position:
               chr9:44417110-44416978 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               105
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               56, 103
               

               Conread position:
               227-380
               

               Cow position:
               chr9:3722740-3722586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               122
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               10, 124
               

               Conread position:
               227-380
               

               Cow position:
               chr9:5763505-5763348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               56, 137
               

               Conread position:
               227-380
               

               Cow position:
               chr9:26403913-26404071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               120
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               20, 138
               

               Conread position:
               227-380
               

               Cow position:
               chr9:33101012-33100860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               56, 130
               

               Conread position:
               227-388
               

               Cow position:
               chr9:5327384-5327541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               56, 38
               

               Conread position:
               227-389
               

               Cow position:
               chr9:52578408-52578242 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               56, 137
               

               Conread position:
               230-368
               

               Cow position:
               chr9:8534553-8534412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               231-378
               

               Cow position:
               chr9:33846944-33846795 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               18, 129
               

               Conread position:
               231-380
               

               Cow position:
               chr9:6952223-6952372 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               52, 120
               

               Conread position:
               231-389
               

               Cow position:
               chr9:18093530-18093373 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               123
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               52, 82
               

               Conread position:
               231-389
               

               Cow position:
               chr9:51928830-51928995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               135
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               52, 135
               

               Conread position:
               232-389
               

               Cow position:
               chr9:33067172-33067337 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               127
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               38, 137
               

               Conread position:
               233-370
               

               Cow position:
               chr9:56861148-56861290 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               9, 131
               

               Conread position:
               240-380
               

               Cow position:
               chr9:42497971-42498111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               43, 120
               

               Conread position:
               240-380
               

               Cow position:
               chr9:54666045-54666187 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               43, 122
               

               Conread position:
               241-380
               

               Cow position:
               chr9:8868998-8868854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               111
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               40, 124
               

               Conread position:
               241-388
               

               Cow position:
               chr9:19376087-19376233 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               109
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               42, 59
               

               Conread position:
               241-388
               

               Cow position:
               chr9:27449477-27449623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               118, 0
               

               Conread position:
               241-389
               

               Cow position:
               chr9:26099480-26099628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               117
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               42, 119
               
Show alignments to all cow chromosomes.
Conread position:	4-370
Cow position:	chr9:61847267-61846878 (view UCSC Genome Browser custom track)
Alignm length:	392
Alignm identity:	255
Alignm E-value:	1e-24
Alignm gaps (pig, cow):	47, 119
Conread position:	6-388
Cow position:	chr9:35100757-35101157 (view UCSC Genome Browser custom track)
Alignm length:	406
Alignm identity:	274
Alignm E-value:	1e-37
Alignm gaps (pig, cow):	9, 63
Conread position:	17-389
Cow position:	chr9:5059435-5059076 (view UCSC Genome Browser custom track)
Alignm length:	384
Alignm identity:	253
Alignm E-value:	3e-23
Alignm gaps (pig, cow):	86, 50
Conread position:	22-380
Cow position:	chr9:34568826-34568472 (view UCSC Genome Browser custom track)
Alignm length:	376
Alignm identity:	253
Alignm E-value:	9e-24
Alignm gaps (pig, cow):	21, 40
Conread position:	51-388
Cow position:	chr9:15053831-15054168 (view UCSC Genome Browser custom track)
Alignm length:	345
Alignm identity:	224
Alignm E-value:	1e-27
Alignm gaps (pig, cow):	57, 17
Conread position:	79-311
Cow position:	chr9:31886444-31886201 (view UCSC Genome Browser custom track)
Alignm length:	249
Alignm identity:	179
Alignm E-value:	4e-27
Alignm gaps (pig, cow):	29, 10
Conread position:	87-380
Cow position:	chr9:30138115-30138407 (view UCSC Genome Browser custom track)
Alignm length:	304
Alignm identity:	209
Alignm E-value:	2e-28
Alignm gaps (pig, cow):	16, 49
Conread position:	94-380
Cow position:	chr9:50544647-50544351 (view UCSC Genome Browser custom track)
Alignm length:	304
Alignm identity:	206
Alignm E-value:	3e-24
Alignm gaps (pig, cow):	18, 55
Conread position:	94-391
Cow position:	chr9:25958406-25958706 (view UCSC Genome Browser custom track)
Alignm length:	309
Alignm identity:	207
Alignm E-value:	1e-24
Alignm gaps (pig, cow):	43, 12
Conread position:	97-361
Cow position:	chr9:36827127-36827389 (view UCSC Genome Browser custom track)
Alignm length:	273
Alignm identity:	185
Alignm E-value:	2e-22
Alignm gaps (pig, cow):	33, 9
Conread position:	114-378
Cow position:	chr9:10355560-10355279 (view UCSC Genome Browser custom track)
Alignm length:	285
Alignm identity:	195
Alignm E-value:	3e-24
Alignm gaps (pig, cow):	68, 216
Conread position:	120-367
Cow position:	chr9:10112035-10111779 (view UCSC Genome Browser custom track)
Alignm length:	260
Alignm identity:	175
Alignm E-value:	2e-21
Alignm gaps (pig, cow):	20, 127
Conread position:	128-361
Cow position:	chr9:42956394-42956625 (view UCSC Genome Browser custom track)
Alignm length:	239
Alignm identity:	170
Alignm E-value:	2e-30
Alignm gaps (pig, cow):	155, 70
Conread position:	128-380
Cow position:	chr9:3582917-3582664 (view UCSC Genome Browser custom track)
Alignm length:	260
Alignm identity:	176
Alignm E-value:	2e-22
Alignm gaps (pig, cow):	56, 40
Conread position:	130-388
Cow position:	chr9:24886587-24886333 (view UCSC Genome Browser custom track)
Alignm length:	260
Alignm identity:	174
Alignm E-value:	4e-27
Alignm gaps (pig, cow):	48, 54
Conread position:	133-314
Cow position:	chr9:23107974-23107789 (view UCSC Genome Browser custom track)
Alignm length:	186
Alignm identity:	130
Alignm E-value:	8e-23
Alignm gaps (pig, cow):	48, 0
Conread position:	136-388
Cow position:	chr9:10118638-10118373 (view UCSC Genome Browser custom track)
Alignm length:	266
Alignm identity:	180
Alignm E-value:	1e-24
Alignm gaps (pig, cow):	46, 0
Conread position:	137-338
Cow position:	chr9:48773374-48773582 (view UCSC Genome Browser custom track)
Alignm length:	210
Alignm identity:	145
Alignm E-value:	2e-21
Alignm gaps (pig, cow):	40, 152
Conread position:	149-378
Cow position:	chr9:41513666-41513899 (view UCSC Genome Browser custom track)
Alignm length:	242
Alignm identity:	169
Alignm E-value:	7e-22
Alignm gaps (pig, cow):	47, 18
Conread position:	151-378
Cow position:	chr9:22114593-22114353 (view UCSC Genome Browser custom track)
Alignm length:	243
Alignm identity:	169
Alignm E-value:	3e-23
Alignm gaps (pig, cow):	17, 146