Cow genome map


           Conread name:
           rmgm040_m24.y1
        

               Conread position:
               2-164
               

               Cow position:
               chr11:23914085-23913920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               122
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               2-199
               

               Cow position:
               chr11:47571963-47572160 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               13, 108
               

               Conread position:
               3-187
               

               Cow position:
               chr11:10375113-10375299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               65, 56
               

               Conread position:
               4-180
               

               Cow position:
               chr11:64756857-64756681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               10, 56
               

               Conread position:
               4-209
               

               Cow position:
               chr11:39528806-39528597 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               9, 26
               

               Conread position:
               4-228
               

               Cow position:
               chr11:9711401-9711166 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               11, 226
               

               Conread position:
               6-187
               

               Cow position:
               chr11:56522943-56522757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               9, 83
               

               Conread position:
               15-212
               

               Cow position:
               chr11:26317375-26317572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               152
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               58, 109
               

               Conread position:
               24-199
               

               Cow position:
               chr11:26761121-26761306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               72-225
               

               Cow position:
               chr11:44431910-44431756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               94, 29
               

               Conread position:
               74-191
               

               Cow position:
               chr11:32692168-32692051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               95
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               92, 16
               
Show alignments to all cow chromosomes.