Cow genome map


           Conread name:
           rmgm040_m24.y1
        

               Conread position:
               2-199
               

               Cow position:
               chr17:31106653-31106845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               12, 29
               

               Conread position:
               4-211
               

               Cow position:
               chr17:19118934-19118713 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               9, 93
               

               Conread position:
               6-212
               

               Cow position:
               chr17:11448756-11448966 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               8, 81
               

               Conread position:
               47-213
               

               Cow position:
               chr17:3399420-3399251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               18, 63
               

               Conread position:
               47-215
               

               Cow position:
               chr17:10223226-10223397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               22, 68
               

               Conread position:
               49-203
               

               Cow position:
               chr17:17537821-17537661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               19, 79
               

               Conread position:
               49-210
               

               Cow position:
               chr17:4340548-4340386 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               14, 79
               

               Conread position:
               66-169
               

               Cow position:
               chr17:1044954-1044851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               84
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               88-241
               

               Cow position:
               chr17:27021028-27021183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               80, 145
               
Show alignments to all cow chromosomes.