Cow genome map


           Conread name:
           rmgm040_m24.y1
        

               Conread position:
               2-209
               

               Cow position:
               chr18:19418896-19419100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               13, 115
               

               Conread position:
               4-184
               

               Cow position:
               chr18:21903353-21903537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               11, 126
               

               Conread position:
               4-199
               

               Cow position:
               chr18:27629598-27629795 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               4-209
               

               Cow position:
               chr18:21720660-21720450 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               4-209
               

               Cow position:
               chr18:35502380-35502594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               11, 175
               

               Conread position:
               4-211
               

               Cow position:
               chr18:43036354-43036556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               11, 38
               

               Conread position:
               4-212
               

               Cow position:
               chr18:22913021-22912802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               10, 107
               

               Conread position:
               5-187
               

               Cow position:
               chr18:10305447-10305261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               14-187
               

               Cow position:
               chr18:35523886-35523711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               54, 60
               

               Conread position:
               34-226
               

               Cow position:
               chr18:30229939-30229747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               28, 158
               

               Conread position:
               43-221
               

               Cow position:
               chr18:22261143-22261323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               129
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               17, 43
               

               Conread position:
               82-197
               

               Cow position:
               chr18:56112115-56112005 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               97
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               101, 16
               
Show alignments to all cow chromosomes.