Cow genome map


           Conread name:
           rmgm040_m24.y1
        

               Conread position:
               4-149
               

               Cow position:
               chr20:34284887-34284742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               11, 124
               

               Conread position:
               4-223
               

               Cow position:
               chr20:13889677-13889456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               167
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               11, 44
               

               Conread position:
               5-210
               

               Cow position:
               chr20:6759971-6759761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               10, 70
               

               Conread position:
               7-212
               

               Cow position:
               chr20:40167801-40168014 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               8, 93
               

               Conread position:
               13-199
               

               Cow position:
               chr20:32067862-32068051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               55, 9
               

               Conread position:
               15-206
               

               Cow position:
               chr20:13035203-13035388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               140
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               152, 53
               

               Conread position:
               32-187
               

               Cow position:
               chr20:20239509-20239664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               36, 27
               

               Conread position:
               50-211
               

               Cow position:
               chr20:12000249-12000410 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               123
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               17, 29
               

               Conread position:
               51-205
               

               Cow position:
               chr20:32694327-32694175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               114
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               71-219
               

               Cow position:
               chr20:2181454-2181310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               115
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               128, 90
               

               Conread position:
               100-211
               

               Cow position:
               chr20:18778188-18778077 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               90
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.