Cow genome map


           Conread name:
           rmgm040_m24.y1
        

               Conread position:
               1-164
               

               Cow position:
               chr21:12434850-12434687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               14, 97
               

               Conread position:
               1-198
               

               Cow position:
               chr21:18336969-18336780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               142
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               107, 20
               

               Conread position:
               4-212
               

               Cow position:
               chr21:29201565-29201778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               64, 128
               

               Conread position:
               4-217
               

               Cow position:
               chr21:48678825-48678611 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               11, 78
               

               Conread position:
               4-218
               

               Cow position:
               chr21:29486440-29486656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               11, 86
               

               Conread position:
               5-154
               

               Cow position:
               chr21:11159580-11159728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               112
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               62, 17
               

               Conread position:
               55-214
               

               Cow position:
               chr21:13548298-13548456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               13, 47
               

               Conread position:
               66-211
               

               Cow position:
               chr21:24394677-24394824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               121
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               83, 63
               

               Conread position:
               70-198
               

               Cow position:
               chr21:38954731-38954859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               98
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.