Cow genome map
| Conread name: | rmgm040_m24.y1 |
| Conread position: | 1-240 |
| Cow position: | chr3:10089894-10090131 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 14, 137 |
| Conread position: | 2-210 |
| Cow position: | chr3:63392088-63392307 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 13, 171 |
| Conread position: | 3-211 |
| Cow position: | chr3:33720707-33720497 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 150 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 12, 92 |
| Conread position: | 4-187 |
| Cow position: | chr3:31803098-31802914 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 11, 114 |
| Conread position: | 4-199 |
| Cow position: | chr3:7849392-7849195 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 11, 146 |
| Conread position: | 4-210 |
| Cow position: | chr3:6533414-6533627 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 11, 100 |
| Conread position: | 4-211 |
| Cow position: | chr3:74541700-74541490 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 11, 56 |
| Conread position: | 4-215 |
| Cow position: | chr3:56522430-56522218 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 10, 84 |
| Conread position: | 4-220 |
| Cow position: | chr3:80268663-80268435 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 11, 125 |
| Conread position: | 4-228 |
| Cow position: | chr3:51323447-51323674 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 11, 96 |
| Conread position: | 5-212 |
| Cow position: | chr3:46052197-46052412 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 161 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 10, 128 |
| Conread position: | 5-219 |
| Cow position: | chr3:2482778-2482565 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 17, 100 |
| Conread position: | 7-215 |
| Cow position: | chr3:56300590-56300381 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 8, 80 |
| Conread position: | 8-199 |
| Cow position: | chr3:17782847-17782656 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 146 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 33, 24 |
| Conread position: | 9-211 |
| Cow position: | chr3:18626376-18626580 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 13, 159 |
| Conread position: | 13-175 |
| Cow position: | chr3:61214788-61214947 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 20, 48 |
| Conread position: | 13-211 |
| Cow position: | chr3:81026681-81026486 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 29, 57 |
| Conread position: | 13-212 |
| Cow position: | chr3:25157948-25157745 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 154 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 18, 119 |
| Conread position: | 13-236 |
| Cow position: | chr3:42915323-42915104 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 55, 32 |
| Conread position: | 14-213 |
| Cow position: | chr3:22376211-22376411 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 55, 113 |
| Conread position: | 15-221 |
| Cow position: | chr3:78912505-78912292 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 171 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 39, 68 |
| Conread position: | 33-212 |
| Cow position: | chr3:1359167-1358985 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 30, 172 |
| Conread position: | 36-199 |
| Cow position: | chr3:81508771-81508608 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 31, 67 |
| Conread position: | 68-212 |
| Cow position: | chr3:18904495-18904350 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 77, 11 |
| Conread position: | 71-218 |
| Cow position: | chr3:47342560-47342708 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 116 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 42, 124 |
| Conread position: | 72-206 |
| Cow position: | chr3:12019587-12019720 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 106 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 95, 43 |
| Conread position: | 74-222 |
| Cow position: | chr3:48458704-48458855 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 78-201 |
| Cow position: | chr3:18035443-18035323 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 97 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 63, 0 |
Show alignments to all cow chromosomes.