Cow genome map


           Conread name:
           rmgm040_m24.y1
        

               Conread position:
               1-244
               

               Cow position:
               chr6:61614614-61614862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               184
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               2-212
               

               Cow position:
               chr6:18786438-18786654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               157
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               14, 156
               

               Conread position:
               4-164
               

               Cow position:
               chr6:49799873-49800033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               11, 111
               

               Conread position:
               5-186
               

               Cow position:
               chr6:1171118-1170935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               10, 98
               

               Conread position:
               6-211
               

               Cow position:
               chr6:26838702-26838919 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               8-210
               

               Cow position:
               chr6:27020033-27019830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               60, 74
               

               Conread position:
               13-184
               

               Cow position:
               chr6:33376884-33376710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               16-191
               

               Cow position:
               chr6:15626584-15626411 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               57, 6
               

               Conread position:
               17-215
               

               Cow position:
               chr6:29516670-29516880 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               47, 119
               

               Conread position:
               43-209
               

               Cow position:
               chr6:35430060-35429890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               23, 74
               

               Conread position:
               44-186
               

               Cow position:
               chr6:52267095-52266952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               20, 36
               

               Conread position:
               72-206
               

               Cow position:
               chr6:53207703-53207837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               97, 9
               
Show alignments to all cow chromosomes.