Cow genome map
| Conread name: | rmgp011_m12.y1 |
| Conread position: | 1-184 |
| Cow position: | chr1:94659468-94659650 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 1-207 |
| Cow position: | chr1:7145128-7144910 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 20, 102 |
| Conread position: | 1-209 |
| Cow position: | chr1:79637340-79637129 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 167, 18 |
| Conread position: | 1-228 |
| Cow position: | chr1:3934562-3934348 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 1-232 |
| Cow position: | chr1:3386415-3386185 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 175 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 1-241 |
| Cow position: | chr1:97227112-97226871 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 20 |
| Conread position: | 1-243 |
| Cow position: | chr1:22000370-22000125 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 1-243 |
| Cow position: | chr1:25549654-25549894 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 179 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 1-243 |
| Cow position: | chr1:28872668-28872908 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 179 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 1-243 |
| Cow position: | chr1:31366487-31366246 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 191, 9 |
| Conread position: | 1-243 |
| Cow position: | chr1:33550514-33550754 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 1-243 |
| Cow position: | chr1:42736048-42736288 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 1-243 |
| Cow position: | chr1:49974597-49974360 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 180 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 1-243 |
| Cow position: | chr1:56194340-56194100 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 1-243 |
| Cow position: | chr1:57367541-57367301 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 175 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 1-243 |
| Cow position: | chr1:57656150-57656389 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 67, 18 |
| Conread position: | 1-243 |
| Cow position: | chr1:63606192-63605952 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 1-243 |
| Cow position: | chr1:68607957-68607717 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 1-243 |
| Cow position: | chr1:72980873-72981098 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 1-243 |
| Cow position: | chr1:73071426-73071187 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 179 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 1-243 |
| Cow position: | chr1:79336212-79335973 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 181 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 29, 60 |
| Conread position: | 1-243 |
| Cow position: | chr1:85781189-85780947 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 179 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 155, 20 |
| Conread position: | 1-243 |
| Cow position: | chr1:86699629-86699387 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 179 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 80, 20 |
| Conread position: | 1-243 |
| Cow position: | chr1:100597791-100597551 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 180 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 4-242 |
| Cow position: | chr1:67835539-67835308 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 24, 94 |
| Conread position: | 5-243 |
| Cow position: | chr1:30027938-30027710 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 18, 30 |
| Conread position: | 6-242 |
| Cow position: | chr1:72119752-72119982 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 170 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 19, 23 |
| Conread position: | 13-225 |
| Cow position: | chr1:13253830-13253617 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 13-235 |
| Cow position: | chr1:76545938-76545716 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 172 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 54 |
| Conread position: | 13-243 |
| Cow position: | chr1:5501579-5501806 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 173 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 9, 48 |
| Conread position: | 13-243 |
| Cow position: | chr1:18244774-18244557 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 183 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 9, 45 |
| Conread position: | 13-243 |
| Cow position: | chr1:58335437-58335667 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 150 |
| Conread position: | 13-243 |
| Cow position: | chr1:62245049-62244817 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 9, 190 |
| Conread position: | 13-243 |
| Cow position: | chr1:62806200-62805975 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 9, 144 |
| Conread position: | 13-243 |
| Cow position: | chr1:72187270-72187040 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 175 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 9, 221 |
| Conread position: | 13-243 |
| Cow position: | chr1:76623344-76623114 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 221 |
| Conread position: | 13-243 |
| Cow position: | chr1:76753048-76752819 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 175 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 8, 126 |
| Conread position: | 13-243 |
| Cow position: | chr1:79457366-79457136 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 174 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 8, 221 |
| Conread position: | 13-243 |
| Cow position: | chr1:85881352-85881573 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 8, 170 |
| Conread position: | 13-243 |
| Cow position: | chr1:93854122-93854351 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 176 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 115, 9 |
| Conread position: | 14-243 |
| Cow position: | chr1:67286113-67286321 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 14-243 |
| Cow position: | chr1:89740625-89740412 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 15-243 |
| Cow position: | chr1:42290008-42290224 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 18, 9 |
| Conread position: | 15-243 |
| Cow position: | chr1:72656586-72656813 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 172 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 8, 158 |
| Conread position: | 17-243 |
| Cow position: | chr1:67902820-67902587 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 15, 154 |
| Conread position: | 19-243 |
| Cow position: | chr1:28801818-28801595 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 214, 0 |
| Conread position: | 19-243 |
| Cow position: | chr1:33711669-33711891 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 169 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 198, 153 |
| Conread position: | 19-243 |
| Cow position: | chr1:62925219-62925444 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 17, 28 |
| Conread position: | 19-243 |
| Cow position: | chr1:82919041-82918827 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 131, 0 |
| Conread position: | 19-243 |
| Cow position: | chr1:86608812-86609032 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 31, 144 |
| Conread position: | 19-243 |
| Cow position: | chr1:87244407-87244630 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 173 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 214, 0 |
| Conread position: | 19-243 |
| Cow position: | chr1:88634986-88635206 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 170 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 153, 0 |
| Conread position: | 19-243 |
| Cow position: | chr1:101149451-101149674 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 169 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 24, 15 |
| Conread position: | 20-243 |
| Cow position: | chr1:25180422-25180200 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 167 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 213, 0 |
| Conread position: | 21-196 |
| Cow position: | chr1:72080088-72080263 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 21-196 |
| Cow position: | chr1:72135050-72135222 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 134 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 78, 34 |
| Conread position: | 21-232 |
| Cow position: | chr1:11863659-11863441 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 21-235 |
| Cow position: | chr1:8330406-8330197 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 131, 0 |
| Conread position: | 21-235 |
| Cow position: | chr1:32342431-32342220 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 107, 34 |
| Conread position: | 21-240 |
| Cow position: | chr1:17942202-17941982 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 164 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 135, 0 |
| Conread position: | 21-240 |
| Cow position: | chr1:30058163-30058378 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 121, 74 |
| Conread position: | 21-240 |
| Cow position: | chr1:63501071-63501289 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 151, 0 |
| Conread position: | 21-243 |
| Cow position: | chr1:8824672-8824893 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 212, 0 |
| Conread position: | 21-243 |
| Cow position: | chr1:18014578-18014356 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 145, 213 |
| Conread position: | 21-243 |
| Cow position: | chr1:34688962-34689173 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 131, 0 |
| Conread position: | 21-243 |
| Cow position: | chr1:37420361-37420143 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 181, 0 |
| Conread position: | 21-243 |
| Cow position: | chr1:55323909-55323691 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 175 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 0 |
| Conread position: | 21-243 |
| Cow position: | chr1:88130371-88130589 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 168 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 22-213 |
| Cow position: | chr1:82346424-82346233 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 160, 144 |
| Conread position: | 22-243 |
| Cow position: | chr1:58201994-58201772 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 29, 146 |
| Conread position: | 22-243 |
| Cow position: | chr1:102435417-102435196 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 167 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 24-243 |
| Cow position: | chr1:40513876-40513666 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 173 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 45, 37 |
| Conread position: | 26-168 |
| Cow position: | chr1:37455328-37455470 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 104 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 26-173 |
| Cow position: | chr1:21087023-21087168 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 111 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 131, 0 |
| Conread position: | 26-223 |
| Cow position: | chr1:30283981-30283791 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 26-224 |
| Cow position: | chr1:97560333-97560530 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 26-235 |
| Cow position: | chr1:52172856-52172647 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 26-239 |
| Cow position: | chr1:13449806-13450018 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 120, 124 |
| Conread position: | 26-239 |
| Cow position: | chr1:17036936-17036731 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 157 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 26-239 |
| Cow position: | chr1:76703751-76703541 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 135, 0 |
| Conread position: | 26-240 |
| Cow position: | chr1:9382628-9382417 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 26-242 |
| Cow position: | chr1:11292489-11292274 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 163 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 207, 0 |
| Conread position: | 26-243 |
| Cow position: | chr1:6708475-6708260 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 165 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 26-243 |
| Cow position: | chr1:8027527-8027310 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 164 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 138, 208 |
| Conread position: | 26-243 |
| Cow position: | chr1:8553943-8554159 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 207, 0 |
| Conread position: | 26-243 |
| Cow position: | chr1:17013121-17012905 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 207, 0 |
| Conread position: | 26-243 |
| Cow position: | chr1:18880770-18880554 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 207, 0 |
| Conread position: | 26-243 |
| Cow position: | chr1:30023576-30023360 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 166 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 207, 0 |
| Conread position: | 26-243 |
| Cow position: | chr1:31396038-31396247 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 26-243 |
| Cow position: | chr1:39543386-39543602 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 164 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 207, 0 |
| Conread position: | 26-243 |
| Cow position: | chr1:40052974-40053186 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 135, 0 |
| Conread position: | 26-243 |
| Cow position: | chr1:40685070-40684859 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 135, 0 |
| Conread position: | 26-243 |
| Cow position: | chr1:43019743-43019956 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 123, 113 |
| Conread position: | 26-243 |
| Cow position: | chr1:53198407-53198624 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 124, 208 |
| Conread position: | 26-243 |
| Cow position: | chr1:55276864-55276655 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 163 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 77, 72 |
| Conread position: | 26-243 |
| Cow position: | chr1:56162946-56163160 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 138, 119 |
| Conread position: | 26-243 |
| Cow position: | chr1:56489462-56489670 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 26-243 |
| Cow position: | chr1:58223916-58224126 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 22, 114 |
| Conread position: | 26-243 |
| Cow position: | chr1:59210519-59210303 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 156 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 207, 0 |
| Conread position: | 26-243 |
| Cow position: | chr1:61308626-61308833 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 26-243 |
| Cow position: | chr1:71562952-71562744 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 26-243 |
| Cow position: | chr1:79921112-79920896 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 167 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 207, 0 |
| Conread position: | 26-243 |
| Cow position: | chr1:80359550-80359335 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 26-243 |
| Cow position: | chr1:82564120-82564335 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 167 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 146, 0 |
| Conread position: | 26-243 |
| Cow position: | chr1:82652259-82652468 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 26-243 |
| Cow position: | chr1:85791311-85791522 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 26-243 |
| Cow position: | chr1:86548507-86548300 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 26-243 |
| Cow position: | chr1:87449568-87449784 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 207, 0 |
| Conread position: | 26-243 |
| Cow position: | chr1:88759181-88759398 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 35, 30 |
| Conread position: | 26-243 |
| Cow position: | chr1:89425205-89425421 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 207, 0 |
| Conread position: | 26-243 |
| Cow position: | chr1:91719022-91718803 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 159 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 138, 210 |
| Conread position: | 26-243 |
| Cow position: | chr1:99995478-99995262 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 207, 0 |
| Conread position: | 27-183 |
| Cow position: | chr1:56722748-56722904 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 27-243 |
| Cow position: | chr1:69766088-69766295 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 162 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 28-243 |
| Cow position: | chr1:18406581-18406359 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 126, 217 |
| Conread position: | 28-243 |
| Cow position: | chr1:28722410-28722623 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 170 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 28-243 |
| Cow position: | chr1:62854210-62853996 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 164 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 203, 0 |
| Conread position: | 29-221 |
| Cow position: | chr1:52233479-52233290 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 144 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 29-243 |
| Cow position: | chr1:13645340-13645562 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 131, 213 |
| Conread position: | 29-243 |
| Cow position: | chr1:69402611-69402823 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 169 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 32, 69 |
| Conread position: | 29-243 |
| Cow position: | chr1:69922845-69922632 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 203, 0 |
| Conread position: | 30-243 |
| Cow position: | chr1:45097344-45097539 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 19, 7 |
| Conread position: | 32-243 |
| Cow position: | chr1:91898628-91898832 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 182, 107 |
| Conread position: | 36-235 |
| Cow position: | chr1:55775779-55775978 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 37-180 |
| Cow position: | chr1:102548833-102548973 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 110 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 37-243 |
| Cow position: | chr1:89771050-89770851 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 131, 20 |
| Conread position: | 38-243 |
| Cow position: | chr1:57567577-57567781 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 195, 0 |
| Conread position: | 40-242 |
| Cow position: | chr1:89900072-89899872 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 160 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 167, 0 |
| Conread position: | 40-242 |
| Cow position: | chr1:97123462-97123662 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 157 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 167, 0 |
| Conread position: | 40-243 |
| Cow position: | chr1:40953340-40953541 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 127, 162 |
| Conread position: | 40-243 |
| Cow position: | chr1:69536532-69536741 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 167 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 117, 205 |
| Conread position: | 40-243 |
| Cow position: | chr1:89809997-89809789 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 164 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 120, 199 |
| Conread position: | 40-243 |
| Cow position: | chr1:101858351-101858152 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 178, 0 |
| Conread position: | 47-243 |
| Cow position: | chr1:38414448-38414638 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 49-232 |
| Cow position: | chr1:59674127-59674310 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 120, 113 |
| Conread position: | 50-243 |
| Cow position: | chr1:1461689-1461496 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 110, 184 |
| Conread position: | 62-243 |
| Cow position: | chr1:87207772-87207580 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 92, 183 |
| Conread position: | 68-243 |
| Cow position: | chr1:40307724-40307898 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 7, 97 |
| Conread position: | 71-243 |
| Cow position: | chr1:33895338-33895510 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 133 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 93, 163 |
| Conread position: | 77-243 |
| Cow position: | chr1:33850946-33851110 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 119 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 25, 37 |
| Conread position: | 90-243 |
| Cow position: | chr1:56144651-56144499 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 148, 0 |
| Conread position: | 124-243 |
| Cow position: | chr1:99349307-99349187 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 97 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 11, 115 |
Show alignments to all cow chromosomes.