Cow genome map


           Conread name:
           rmgp011_m12.y1
        

               Conread position:
               1-169
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               120
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               1-235
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               1-243
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               28, 236
               

               Conread position:
               1-243
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               182
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               99, 20
               

               Conread position:
               1-243
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               181
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               1-243
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               183
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               29, 198
               

               Conread position:
               1-243
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               184
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               1-243
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               183
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               232, 0
               

               Conread position:
               1-243
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               173
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               1-243
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               173
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               1-243
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               1-243
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               184
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               28, 236
               

               Conread position:
               1-243
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               1-243
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               179
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               1-243
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               178
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               20, 238
               

               Conread position:
               1-243
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               2-210
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               10, 57
               

               Conread position:
               2-243
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               168
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               119, 22
               

               Conread position:
               4-231
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               166
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               30, 57
               

               Conread position:
               5-203
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               17, 74
               

               Conread position:
               6-154
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               8-242
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               42, 147
               

               Conread position:
               10-243
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               13-243
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               174
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               9, 67
               

               Conread position:
               13-243
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               171
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               13-243
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               171
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               220, 0
               

               Conread position:
               15-243
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               175
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               18, 9
               

               Conread position:
               15-243
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               181
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 9
               

               Conread position:
               19-190
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               24, 18
               

               Conread position:
               19-243
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               173
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               135, 154
               

               Conread position:
               19-243
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               19-243
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               170
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               142, 0
               

               Conread position:
               21-196
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               151, 0
               

               Conread position:
               21-227
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               159
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               121, 79
               

               Conread position:
               21-243
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               168
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               21-243
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               164
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               130, 0
               

               Conread position:
               21-243
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               164
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               21-243
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               21-243
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               29, 14
               

               Conread position:
               21-243
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               154
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               21-243
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               163
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               159, 0
               

               Conread position:
               21-243
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               154
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               21-243
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               49, 74
               

               Conread position:
               22-243
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               171
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               142, 151
               

               Conread position:
               26-242
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               131, 208
               

               Conread position:
               26-242
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               133, 0
               

               Conread position:
               26-243
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               162
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               207, 0
               

               Conread position:
               26-243
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               26-243
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               160
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               26-243
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               135, 0
               

               Conread position:
               26-243
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               207, 0
               

               Conread position:
               26-243
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               163
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               118, 0
               

               Conread position:
               26-243
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               161
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               135, 0
               

               Conread position:
               26-243
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               146, 63
               

               Conread position:
               26-243
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               165
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               26-243
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               207, 0
               

               Conread position:
               26-243
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               42, 6
               

               Conread position:
               26-243
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               160
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               135, 16
               

               Conread position:
               26-243
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               148, 0
               

               Conread position:
               28-243
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               35, 207
               

               Conread position:
               28-243
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               29-196
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               32-240
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               36, 26
               

               Conread position:
               32-243
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               7, 66
               

               Conread position:
               37-243
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               13, 60
               

               Conread position:
               44-243
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               152
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               46, 82
               

               Conread position:
               62-230
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               122
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               65-243
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               146
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               10, 46
               

               Conread position:
               93-243
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               10, 144
               
Show alignments to all cow chromosomes.