Cow genome map

Conread name: rmgp011_m12.y1

Conread position: 1-196
Cow position:
Alignm length: 196
Alignm identity: 142
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 20, 0

Conread position: 1-232
Cow position:
Alignm length: 232
Alignm identity: 163
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 9, 0

Conread position: 1-235
Cow position:
Alignm length: 242
Alignm identity: 178
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 33, 0

Conread position: 1-240
Cow position:
Alignm length: 240
Alignm identity: 180
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 20, 0

Conread position: 1-241
Cow position:
Alignm length: 241
Alignm identity: 179
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 7, 0

Conread position: 1-241
Cow position:
Alignm length: 241
Alignm identity: 176
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 21, 0

Conread position: 1-243
Cow position:
Alignm length: 243
Alignm identity: 172
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 20, 0

Conread position: 1-243
Cow position:
Alignm length: 243
Alignm identity: 168
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 20, 0

Conread position: 1-243
Cow position:
Alignm length: 243
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 1-243
Cow position:
Alignm length: 243
Alignm identity: 177
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 18, 0

Conread position: 1-243
Cow position:
Alignm length: 243
Alignm identity: 173
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 21, 0

Conread position: 1-243
Cow position:
Alignm length: 243
Alignm identity: 177
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 20, 0

Conread position: 1-243
Cow position:
Alignm length: 244
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 232

Conread position: 1-243
Cow position:
Alignm length: 244
Alignm identity: 176
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 24, 28

Conread position: 1-243
Cow position:
Alignm length: 246
Alignm identity: 175
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 102, 176

Conread position: 1-243
Cow position:
Alignm length: 243
Alignm identity: 175
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 20, 0

Conread position: 1-243
Cow position:
Alignm length: 245
Alignm identity: 179
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 29, 234

Conread position: 1-243
Cow position:
Alignm length: 244
Alignm identity: 182
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 21, 12

Conread position: 4-243
Cow position:
Alignm length: 246
Alignm identity: 182
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 22, 235

Conread position: 4-243
Cow position:
Alignm length: 246
Alignm identity: 181
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 22, 117

Conread position: 5-243
Cow position:
Alignm length: 245
Alignm identity: 181
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 24, 234

Conread position: 10-243
Cow position:
Alignm length: 237
Alignm identity: 180
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 15, 146

Conread position: 12-172
Cow position:
Alignm length: 162
Alignm identity: 114
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 138, 44

Conread position: 13-223
Cow position:
Alignm length: 212
Alignm identity: 150
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 106, 110

Conread position: 13-235
Cow position:
Alignm length: 225
Alignm identity: 167
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 8, 68

Conread position: 13-243
Cow position:
Alignm length: 232
Alignm identity: 168
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 9, 221

Conread position: 13-243
Cow position:
Alignm length: 232
Alignm identity: 171
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 6, 184

Conread position: 13-243
Cow position:
Alignm length: 232
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 87

Conread position: 13-243
Cow position:
Alignm length: 232
Alignm identity: 168
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 9, 116

Conread position: 13-243
Cow position:
Alignm length: 232
Alignm identity: 175
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 9, 156

Conread position: 13-243
Cow position:
Alignm length: 232
Alignm identity: 172
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 8, 221

Conread position: 13-243
Cow position:
Alignm length: 232
Alignm identity: 170
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 9, 46

Conread position: 13-243
Cow position:
Alignm length: 232
Alignm identity: 168
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 9, 185

Conread position: 15-243
Cow position:
Alignm length: 231
Alignm identity: 169
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 33, 5

Conread position: 15-243
Cow position:
Alignm length: 239
Alignm identity: 177
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 21, 156

Conread position: 18-149
Cow position:
Alignm length: 132
Alignm identity: 99
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 18-235
Cow position:
Alignm length: 220
Alignm identity: 167
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 11, 0

Conread position: 18-242
Cow position:
Alignm length: 226
Alignm identity: 163
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 57, 22

Conread position: 19-235
Cow position:
Alignm length: 217
Alignm identity: 166
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 120, 0

Conread position: 19-242
Cow position:
Alignm length: 225
Alignm identity: 172
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 135, 18

Conread position: 19-242
Cow position:
Alignm length: 224
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 0

Conread position: 19-242
Cow position:
Alignm length: 224
Alignm identity: 167
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 147, 0

Conread position: 19-243
Cow position:
Alignm length: 225
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 0

Conread position: 19-243
Cow position:
Alignm length: 230
Alignm identity: 170
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 156, 218

Conread position: 19-243
Cow position:
Alignm length: 232
Alignm identity: 168
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 131, 226

Conread position: 19-243
Cow position:
Alignm length: 225
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 0

Conread position: 19-243
Cow position:
Alignm length: 231
Alignm identity: 165
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 117, 47

Conread position: 21-156
Cow position:
Alignm length: 136
Alignm identity: 105
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 85, 0

Conread position: 21-173
Cow position:
Alignm length: 153
Alignm identity: 109
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 21-192
Cow position:
Alignm length: 172
Alignm identity: 132
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 140, 0

Conread position: 21-196
Cow position:
Alignm length: 176
Alignm identity: 128
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 56, 0

Conread position: 21-211
Cow position:
Alignm length: 191
Alignm identity: 141
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 70, 0

Conread position: 21-233
Cow position:
Alignm length: 218
Alignm identity: 148
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 36, 107

Conread position: 21-235
Cow position:
Alignm length: 221
Alignm identity: 155
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 98, 0

Conread position: 21-235
Cow position:
Alignm length: 215
Alignm identity: 156
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 136, 0

Conread position: 21-240
Cow position:
Alignm length: 220
Alignm identity: 162
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 75, 0

Conread position: 21-242
Cow position:
Alignm length: 222
Alignm identity: 165
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 216, 0

Conread position: 21-242
Cow position:
Alignm length: 222
Alignm identity: 153
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 78, 0

Conread position: 21-242
Cow position:
Alignm length: 223
Alignm identity: 159
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 29, 139

Conread position: 21-243
Cow position:
Alignm length: 225
Alignm identity: 169
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 28, 40

Conread position: 21-243
Cow position:
Alignm length: 223
Alignm identity: 160
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 118, 0

Conread position: 21-243
Cow position:
Alignm length: 224
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 40

Conread position: 21-243
Cow position:
Alignm length: 224
Alignm identity: 147
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 143, 37

Conread position: 21-243
Cow position:
Alignm length: 228
Alignm identity: 172
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 192, 140

Conread position: 21-243
Cow position:
Alignm length: 223
Alignm identity: 170
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 118, 0

Conread position: 21-243
Cow position:
Alignm length: 223
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 21-243
Cow position:
Alignm length: 223
Alignm identity: 160
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 100, 0

Conread position: 22-196
Cow position:
Alignm length: 175
Alignm identity: 125
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 159, 0

Conread position: 22-235
Cow position:
Alignm length: 214
Alignm identity: 168
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 22-243
Cow position:
Alignm length: 222
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 0

Conread position: 24-243
Cow position:
Alignm length: 220
Alignm identity: 158
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 151, 0

Conread position: 25-243
Cow position:
Alignm length: 220
Alignm identity: 167
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 31, 137

Conread position: 25-243
Cow position:
Alignm length: 219
Alignm identity: 160
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 212, 0

Conread position: 26-159
Cow position:
Alignm length: 134
Alignm identity: 98
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 0, 0

Conread position: 26-211
Cow position:
Alignm length: 186
Alignm identity: 138
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 103, 0

Conread position: 26-232
Cow position:
Alignm length: 215
Alignm identity: 155
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 42, 35

Conread position: 26-240
Cow position:
Alignm length: 217
Alignm identity: 156
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 46, 33

Conread position: 26-242
Cow position:
Alignm length: 219
Alignm identity: 156
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 10, 115

Conread position: 26-243
Cow position:
Alignm length: 218
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 26-243
Cow position:
Alignm length: 218
Alignm identity: 154
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 113, 0

Conread position: 26-243
Cow position:
Alignm length: 220
Alignm identity: 164
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 113, 209

Conread position: 26-243
Cow position:
Alignm length: 219
Alignm identity: 165
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 42, 32

Conread position: 26-243
Cow position:
Alignm length: 219
Alignm identity: 155
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 82, 100

Conread position: 26-243
Cow position:
Alignm length: 218
Alignm identity: 158
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 113, 0

Conread position: 26-243
Cow position:
Alignm length: 218
Alignm identity: 161
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 119, 0

Conread position: 26-243
Cow position:
Alignm length: 218
Alignm identity: 161
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 158, 0

Conread position: 26-243
Cow position:
Alignm length: 219
Alignm identity: 146
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 30, 96

Conread position: 26-243
Cow position:
Alignm length: 221
Alignm identity: 163
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 24, 88

Conread position: 26-243
Cow position:
Alignm length: 218
Alignm identity: 158
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 192, 0

Conread position: 26-243
Cow position:
Alignm length: 218
Alignm identity: 162
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 133, 0

Conread position: 26-243
Cow position:
Alignm length: 218
Alignm identity: 154
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 112, 0

Conread position: 26-243
Cow position:
Alignm length: 218
Alignm identity: 157
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 70, 0

Conread position: 26-243
Cow position:
Alignm length: 221
Alignm identity: 165
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 138, 210

Conread position: 26-243
Cow position:
Alignm length: 218
Alignm identity: 164
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 136, 0

Conread position: 26-243
Cow position:
Alignm length: 218
Alignm identity: 163
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 207, 0

Conread position: 26-243
Cow position:
Alignm length: 218
Alignm identity: 166
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 35, 0

Conread position: 26-243
Cow position:
Alignm length: 218
Alignm identity: 155
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 113, 0

Conread position: 26-243
Cow position:
Alignm length: 218
Alignm identity: 157
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 207, 0

Conread position: 27-243
Cow position:
Alignm length: 217
Alignm identity: 148
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 145, 0

Conread position: 29-243
Cow position:
Alignm length: 217
Alignm identity: 167
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 37, 206

Conread position: 29-243
Cow position:
Alignm length: 217
Alignm identity: 158
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 15, 208

Conread position: 33-243
Cow position:
Alignm length: 211
Alignm identity: 154
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 28, 0

Conread position: 36-235
Cow position:
Alignm length: 200
Alignm identity: 150
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 36-243
Cow position:
Alignm length: 208
Alignm identity: 145
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 197, 0

Conread position: 36-243
Cow position:
Alignm length: 208
Alignm identity: 163
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 115, 0

Conread position: 37-242
Cow position:
Alignm length: 206
Alignm identity: 164
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 40-235
Cow position:
Alignm length: 196
Alignm identity: 142
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 131, 0

Conread position: 40-237
Cow position:
Alignm length: 199
Alignm identity: 157
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 124, 132

Conread position: 47-232
Cow position:
Alignm length: 193
Alignm identity: 141
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 126, 19

Conread position: 48-243
Cow position:
Alignm length: 196
Alignm identity: 154
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 189, 0

Conread position: 50-243
Cow position:
Alignm length: 194
Alignm identity: 158
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 0

Conread position: 62-243
Cow position:
Alignm length: 182
Alignm identity: 131
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 99, 0

Conread position: 62-243
Cow position:
Alignm length: 185
Alignm identity: 144
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 104, 30

Conread position: 63-243
Cow position:
Alignm length: 181
Alignm identity: 147
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 98, 0

Conread position: 65-243
Cow position:
Alignm length: 180
Alignm identity: 128
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 89, 154

Conread position: 66-243
Cow position:
Alignm length: 183
Alignm identity: 138
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 88, 176

Conread position: 77-243
Cow position:
Alignm length: 167
Alignm identity: 122
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 62, 0

Conread position: 91-243
Cow position:
Alignm length: 154
Alignm identity: 117
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 73, 107

Conread position: 101-243
Cow position:
Alignm length: 144
Alignm identity: 110
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 19, 132

Show alignments to all cow chromosomes.