Cow genome map

Conread name: rmgp011_m12.y1

Conread position: 1-187
Cow position: chr19:27053188-27053011 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 135
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 19, 0

Conread position: 1-243
Cow position: chr19:34056-34302 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 180
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 23, 204

Conread position: 1-243
Cow position: chr19:171849-172089 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 175
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 21, 0

Conread position: 1-243
Cow position: chr19:203601-203842 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 177
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 175, 20

Conread position: 1-243
Cow position: chr19:378244-377994 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 173
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 154, 34

Conread position: 1-243
Cow position: chr19:10672668-10672428 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 179
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 21, 0

Conread position: 1-243
Cow position: chr19:28592919-28593155 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 181
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 21, 77

Conread position: 1-243
Cow position: chr19:33872882-33873117 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 179
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 21, 0

Conread position: 1-243
Cow position: chr19:39390156-39390399 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 184
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 31, 104

Conread position: 1-243
Cow position: chr19:40852792-40852552 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 180
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 14, 0

Conread position: 1-243
Cow position: chr19:55078379-55078624 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 183
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 33, 236

Conread position: 4-243
Cow position: chr19:43143351-43143597 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 177
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 18, 237

Conread position: 5-242
Cow position: chr19:36476997-36477233 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 165
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 18, 152

Conread position: 6-239
Cow position: chr19:548036-548266 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 168
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 22, 175

Conread position: 8-243
Cow position: chr19:28581994-28581776 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 161
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 90, 0

Conread position: 11-243
Cow position: chr19:440000-439768 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 171
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 11, 223

Conread position: 13-243
Cow position: chr19:33941262-33941490 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 19-203
Cow position: chr19:31341379-31341558 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 130
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 66, 0

Conread position: 19-235
Cow position: chr19:350919-350695 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 165
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 134, 100

Conread position: 19-235
Cow position: chr19:35376221-35376429 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 160
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 36, 71

Conread position: 19-242
Cow position: chr19:32238201-32237987 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 162
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 24, 62

Conread position: 19-243
Cow position: chr19:4533084-4532865 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 171
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 116, 16

Conread position: 21-242
Cow position: chr19:4385145-4385362 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 166
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 39, 0

Conread position: 21-243
Cow position: chr19:37565-37778 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 158
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 124, 0

Conread position: 21-243
Cow position: chr19:42649408-42649194 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 156
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 103, 0

Conread position: 22-195
Cow position: chr19:544232-544059 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 134
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 22-243
Cow position: chr19:76574-76357 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 168
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 123, 0

Conread position: 24-243
Cow position: chr19:261093-261313 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 165
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 42, 144

Conread position: 24-243
Cow position: chr19:20125294-20125502 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 163
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 178, 53

Conread position: 25-223
Cow position: chr19:29209227-29209426 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 153
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 18, 0

Conread position: 26-193
Cow position: chr19:772272-772438 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 127
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 135, 0

Conread position: 26-228
Cow position: chr19:7341734-7341937 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 150
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 138, 0

Conread position: 26-243
Cow position: chr19:685517-685722 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 162
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 113, 0

Conread position: 26-243
Cow position: chr19:32193246-32193455 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 157
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 180, 99

Conread position: 26-243
Cow position: chr19:32212398-32212189 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 159
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 133, 0

Conread position: 26-243
Cow position: chr19:32244342-32244558 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 163
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 207, 0

Conread position: 26-243
Cow position: chr19:52152587-52152383 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 159
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 133, 0

Conread position: 28-243
Cow position: chr19:1031777-1031987 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 162
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 20, 120

Conread position: 29-242
Cow position: chr19:4252692-4252479 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 163
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 29-243
Cow position: chr19:32665200-32665411 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 165
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 18, 0

Conread position: 32-215
Cow position: chr19:801659-801842 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 138
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 114, 136

Conread position: 40-235
Cow position: chr19:30371952-30372154 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 152
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 128, 0

Conread position: 40-243
Cow position: chr19:171067-170862 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 148
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 124, 189

Conread position: 40-243
Cow position: chr19:416325-416531 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 153
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 124, 54

Conread position: 45-212
Cow position: chr19:25622737-25622569 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 124
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 23, 0

Conread position: 50-243
Cow position: chr19:39688236-39688422 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 151
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 99, 0

Conread position: 62-243
Cow position: chr19:7488011-7488191 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 140
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 171, 0

Show alignments to all cow chromosomes.