Cow genome map
| Conread name: | rmgp011_m12.y1 |
| Conread position: | 1-211 |
| Cow position: | chr25:17561008-17560802 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 165 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 1-211 |
| Cow position: | chr25:17563317-17563111 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 163 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 1-236 |
| Cow position: | chr25:18302358-18302595 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 177 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 167, 20 |
| Conread position: | 1-242 |
| Cow position: | chr25:18276238-18276001 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 21, 77 |
| Conread position: | 1-243 |
| Cow position: | chr25:20493941-20494186 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 186 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 20, 59 |
| Conread position: | 1-243 |
| Cow position: | chr25:25506234-25506474 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 179 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 1-243 |
| Cow position: | chr25:34347407-34347168 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 5-172 |
| Cow position: | chr25:23346108-23345940 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 17, 50 |
| Conread position: | 12-243 |
| Cow position: | chr25:22147089-22147318 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 175 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 10, 71 |
| Conread position: | 13-243 |
| Cow position: | chr25:13780632-13780860 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 170 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 13-243 |
| Cow position: | chr25:18890420-18890191 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 93 |
| Conread position: | 13-243 |
| Cow position: | chr25:26278871-26279090 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 167 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 8, 54 |
| Conread position: | 15-243 |
| Cow position: | chr25:18028031-18027805 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 138, 0 |
| Conread position: | 21-228 |
| Cow position: | chr25:34014742-34014536 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 21-243 |
| Cow position: | chr25:8674530-8674739 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 21-243 |
| Cow position: | chr25:11933918-11933701 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 46, 119 |
| Conread position: | 21-243 |
| Cow position: | chr25:18411678-18411467 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 176 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 140, 0 |
| Conread position: | 22-243 |
| Cow position: | chr25:11375742-11375522 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 172 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 211, 0 |
| Conread position: | 22-243 |
| Cow position: | chr25:18092627-18092843 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 169 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 24-227 |
| Cow position: | chr25:18172951-18173144 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 46, 34 |
| Conread position: | 26-193 |
| Cow position: | chr25:32979150-32978983 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 26-242 |
| Cow position: | chr25:26921839-26922054 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 151 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 207, 0 |
| Conread position: | 26-243 |
| Cow position: | chr25:17589935-17589724 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 135, 0 |
| Conread position: | 26-243 |
| Cow position: | chr25:19916697-19916907 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 40, 32 |
| Conread position: | 26-243 |
| Cow position: | chr25:20777290-20777073 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 113, 139 |
| Conread position: | 26-243 |
| Cow position: | chr25:35362811-35362595 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 164 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 209, 0 |
| Conread position: | 29-242 |
| Cow position: | chr25:17469082-17468869 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 137, 144 |
| Conread position: | 36-242 |
| Cow position: | chr25:20629195-20629400 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 148 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 190, 0 |
| Conread position: | 40-240 |
| Cow position: | chr25:14015799-14015998 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 160 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 0 |
| Conread position: | 45-242 |
| Cow position: | chr25:24171662-24171852 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 46-235 |
| Cow position: | chr25:12759970-12759777 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 61-243 |
| Cow position: | chr25:34656802-34656621 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 172, 0 |
| Conread position: | 62-243 |
| Cow position: | chr25:12943793-12943613 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 171, 0 |
| Conread position: | 112-243 |
| Cow position: | chr25:33991360-33991232 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 102 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 7, 0 |
Show alignments to all cow chromosomes.