Cow genome map

Conread name: rmgp011_m12.y1

Conread position: 1-154
Cow position:
Alignm length: 155
Alignm identity: 115
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 20, 9

Conread position: 1-165
Cow position:
Alignm length: 165
Alignm identity: 126
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 1-172
Cow position:
Alignm length: 172
Alignm identity: 123
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 20, 0

Conread position: 1-183
Cow position:
Alignm length: 183
Alignm identity: 137
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 7, 0

Conread position: 1-195
Cow position:
Alignm length: 195
Alignm identity: 141
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 18, 0

Conread position: 1-232
Cow position:
Alignm length: 235
Alignm identity: 180
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 25, 51

Conread position: 1-232
Cow position:
Alignm length: 232
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 0

Conread position: 1-243
Cow position:
Alignm length: 243
Alignm identity: 175
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 20, 0

Conread position: 1-243
Cow position:
Alignm length: 247
Alignm identity: 180
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 33, 236

Conread position: 1-243
Cow position:
Alignm length: 249
Alignm identity: 179
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 18, 150

Conread position: 1-243
Cow position:
Alignm length: 243
Alignm identity: 181
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 20, 0

Conread position: 1-243
Cow position:
Alignm length: 243
Alignm identity: 180
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 21, 0

Conread position: 1-243
Cow position:
Alignm length: 243
Alignm identity: 177
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 20, 0

Conread position: 1-243
Cow position:
Alignm length: 243
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 1-243
Cow position:
Alignm length: 243
Alignm identity: 177
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 14, 0

Conread position: 1-243
Cow position:
Alignm length: 245
Alignm identity: 177
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 25, 161

Conread position: 1-243
Cow position:
Alignm length: 244
Alignm identity: 176
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 157, 20

Conread position: 4-232
Cow position:
Alignm length: 231
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 94

Conread position: 4-243
Cow position:
Alignm length: 244
Alignm identity: 179
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 25, 89

Conread position: 5-208
Cow position:
Alignm length: 208
Alignm identity: 156
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 18, 55

Conread position: 5-243
Cow position:
Alignm length: 239
Alignm identity: 172
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 16, 0

Conread position: 5-243
Cow position:
Alignm length: 243
Alignm identity: 166
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 37, 73

Conread position: 6-224
Cow position:
Alignm length: 221
Alignm identity: 154
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 19, 35

Conread position: 6-243
Cow position:
Alignm length: 239
Alignm identity: 180
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 204, 7

Conread position: 8-243
Cow position:
Alignm length: 236
Alignm identity: 171
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 225, 0

Conread position: 13-235
Cow position:
Alignm length: 224
Alignm identity: 167
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 9, 43

Conread position: 13-243
Cow position:
Alignm length: 234
Alignm identity: 177
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 8, 223

Conread position: 13-243
Cow position:
Alignm length: 232
Alignm identity: 173
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 8, 114

Conread position: 13-243
Cow position:
Alignm length: 232
Alignm identity: 174
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 8, 223

Conread position: 13-243
Cow position:
Alignm length: 231
Alignm identity: 173
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 9, 0

Conread position: 15-235
Cow position:
Alignm length: 221
Alignm identity: 166
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 80, 0

Conread position: 15-242
Cow position:
Alignm length: 229
Alignm identity: 171
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 141, 46

Conread position: 15-243
Cow position:
Alignm length: 230
Alignm identity: 167
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 139, 221

Conread position: 19-240
Cow position:
Alignm length: 223
Alignm identity: 161
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 135, 143

Conread position: 19-243
Cow position:
Alignm length: 225
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 19-243
Cow position:
Alignm length: 225
Alignm identity: 166
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 81, 0

Conread position: 21-230
Cow position:
Alignm length: 210
Alignm identity: 154
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 56, 0

Conread position: 21-232
Cow position:
Alignm length: 212
Alignm identity: 159
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 58, 0

Conread position: 21-235
Cow position:
Alignm length: 215
Alignm identity: 162
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 21-241
Cow position:
Alignm length: 223
Alignm identity: 156
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 121, 112

Conread position: 21-242
Cow position:
Alignm length: 222
Alignm identity: 169
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 169, 0

Conread position: 21-243
Cow position:
Alignm length: 223
Alignm identity: 161
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 191, 0

Conread position: 21-243
Cow position:
Alignm length: 223
Alignm identity: 163
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 217, 0

Conread position: 21-243
Cow position:
Alignm length: 223
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 0

Conread position: 21-243
Cow position:
Alignm length: 224
Alignm identity: 152
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 154, 213

Conread position: 21-243
Cow position:
Alignm length: 223
Alignm identity: 167
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 212, 0

Conread position: 21-243
Cow position:
Alignm length: 224
Alignm identity: 164
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 125, 213

Conread position: 21-243
Cow position:
Alignm length: 223
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 0

Conread position: 21-243
Cow position:
Alignm length: 223
Alignm identity: 165
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 212, 0

Conread position: 22-207
Cow position:
Alignm length: 186
Alignm identity: 139
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 130, 0

Conread position: 22-232
Cow position:
Alignm length: 212
Alignm identity: 159
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 135, 14

Conread position: 22-240
Cow position:
Alignm length: 219
Alignm identity: 162
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 39, 0

Conread position: 22-243
Cow position:
Alignm length: 223
Alignm identity: 161
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 30, 140

Conread position: 22-243
Cow position:
Alignm length: 225
Alignm identity: 165
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 33, 122

Conread position: 22-243
Cow position:
Alignm length: 223
Alignm identity: 161
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 23, 68

Conread position: 22-243
Cow position:
Alignm length: 222
Alignm identity: 164
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 211, 0

Conread position: 23-243
Cow position:
Alignm length: 221
Alignm identity: 164
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 209, 0

Conread position: 24-178
Cow position:
Alignm length: 156
Alignm identity: 112
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 132, 149

Conread position: 24-243
Cow position:
Alignm length: 220
Alignm identity: 162
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 209, 0

Conread position: 24-243
Cow position:
Alignm length: 220
Alignm identity: 161
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 126, 0

Conread position: 24-243
Cow position:
Alignm length: 220
Alignm identity: 172
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 96, 0

Conread position: 25-241
Cow position:
Alignm length: 226
Alignm identity: 170
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 140, 217

Conread position: 25-243
Cow position:
Alignm length: 219
Alignm identity: 158
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 208, 0

Conread position: 26-177
Cow position:
Alignm length: 153
Alignm identity: 109
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 121, 0

Conread position: 26-224
Cow position:
Alignm length: 199
Alignm identity: 147
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 26-241
Cow position:
Alignm length: 216
Alignm identity: 159
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 113, 0

Conread position: 26-242
Cow position:
Alignm length: 217
Alignm identity: 163
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 84, 0

Conread position: 26-242
Cow position:
Alignm length: 217
Alignm identity: 158
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 206, 0

Conread position: 26-243
Cow position:
Alignm length: 218
Alignm identity: 163
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 121, 0

Conread position: 26-243
Cow position:
Alignm length: 220
Alignm identity: 162
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 35, 30

Conread position: 26-243
Cow position:
Alignm length: 218
Alignm identity: 162
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 207, 0

Conread position: 26-243
Cow position:
Alignm length: 218
Alignm identity: 158
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 207, 0

Conread position: 26-243
Cow position:
Alignm length: 219
Alignm identity: 163
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 76, 72

Conread position: 26-243
Cow position:
Alignm length: 219
Alignm identity: 160
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 17, 73

Conread position: 26-243
Cow position:
Alignm length: 218
Alignm identity: 158
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 110, 0

Conread position: 26-243
Cow position:
Alignm length: 218
Alignm identity: 160
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 206, 0

Conread position: 26-243
Cow position:
Alignm length: 218
Alignm identity: 163
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 207, 0

Conread position: 26-243
Cow position:
Alignm length: 218
Alignm identity: 159
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 207, 0

Conread position: 26-243
Cow position:
Alignm length: 218
Alignm identity: 157
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 207, 0

Conread position: 26-243
Cow position:
Alignm length: 219
Alignm identity: 160
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 123, 208

Conread position: 26-243
Cow position:
Alignm length: 218
Alignm identity: 161
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 110, 0

Conread position: 26-243
Cow position:
Alignm length: 219
Alignm identity: 159
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 24, 61

Conread position: 26-243
Cow position:
Alignm length: 218
Alignm identity: 162
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 207, 0

Conread position: 26-243
Cow position:
Alignm length: 218
Alignm identity: 164
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 207, 0

Conread position: 26-243
Cow position:
Alignm length: 219
Alignm identity: 158
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 76, 72

Conread position: 26-243
Cow position:
Alignm length: 218
Alignm identity: 160
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 207, 0

Conread position: 27-235
Cow position:
Alignm length: 210
Alignm identity: 167
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 146

Conread position: 27-243
Cow position:
Alignm length: 217
Alignm identity: 163
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 125, 0

Conread position: 27-243
Cow position:
Alignm length: 217
Alignm identity: 148
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 76, 0

Conread position: 28-243
Cow position:
Alignm length: 216
Alignm identity: 161
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 205, 0

Conread position: 29-243
Cow position:
Alignm length: 222
Alignm identity: 150
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 65, 211

Conread position: 29-243
Cow position:
Alignm length: 215
Alignm identity: 163
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 204, 0

Conread position: 36-243
Cow position:
Alignm length: 210
Alignm identity: 155
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 121, 199

Conread position: 37-235
Cow position:
Alignm length: 200
Alignm identity: 141
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 49, 42

Conread position: 37-240
Cow position:
Alignm length: 204
Alignm identity: 154
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 135, 0

Conread position: 37-243
Cow position:
Alignm length: 207
Alignm identity: 153
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 196, 0

Conread position: 37-243
Cow position:
Alignm length: 207
Alignm identity: 153
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 6, 0

Conread position: 40-193
Cow position:
Alignm length: 154
Alignm identity: 123
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 121, 0

Conread position: 40-243
Cow position:
Alignm length: 204
Alignm identity: 148
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 97, 0

Conread position: 40-243
Cow position:
Alignm length: 204
Alignm identity: 161
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 0

Conread position: 40-243
Cow position:
Alignm length: 204
Alignm identity: 157
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 59, 0

Conread position: 40-243
Cow position:
Alignm length: 204
Alignm identity: 157
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 197, 0

Conread position: 41-196
Cow position:
Alignm length: 156
Alignm identity: 121
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 41-240
Cow position:
Alignm length: 200
Alignm identity: 114
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 45-243
Cow position:
Alignm length: 199
Alignm identity: 148
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 84, 0

Conread position: 45-243
Cow position:
Alignm length: 199
Alignm identity: 145
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 33, 0

Conread position: 47-243
Cow position:
Alignm length: 201
Alignm identity: 149
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 121, 52

Conread position: 50-240
Cow position:
Alignm length: 191
Alignm identity: 141
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 55-223
Cow position:
Alignm length: 169
Alignm identity: 123
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 62-243
Cow position:
Alignm length: 182
Alignm identity: 135
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 79, 0

Conread position: 62-243
Cow position:
Alignm length: 182
Alignm identity: 141
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 109, 0

Conread position: 62-243
Cow position:
Alignm length: 182
Alignm identity: 135
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 171, 0

Conread position: 101-243
Cow position:
Alignm length: 143
Alignm identity: 115
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 54, 0

Show alignments to all cow chromosomes.