Cow genome map


           Conread name:
           rmgp011_m12.y1
        

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               13, 9
               

               Conread position:
               1-174
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               122
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               156, 18
               

               Conread position:
               1-223
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               1-240
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               49, 20
               

               Conread position:
               1-240
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               177
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               1-241
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               175
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               1-243
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               175
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               1-243
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               182
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               1-243
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               176
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               1-243
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               172
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               1-243
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               179
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               1-243
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               21, 83
               

               Conread position:
               1-243
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 37
               

               Conread position:
               1-243
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               1-243
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               181
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               22, 233
               

               Conread position:
               1-243
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               27, 152
               

               Conread position:
               1-243
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               180
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               1-243
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               185
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               182, 27
               

               Conread position:
               1-243
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               179
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               11, 86
               

               Conread position:
               1-243
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               21, 143
               

               Conread position:
               1-243
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 99
               

               Conread position:
               1-243
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               188
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               36, 160
               

               Conread position:
               1-243
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               33, 236
               

               Conread position:
               4-243
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               183
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               16, 175
               

               Conread position:
               5-243
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               177
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               29, 235
               

               Conread position:
               8-236
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               167
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               13-243
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               174
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               8, 222
               

               Conread position:
               13-243
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               166
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               9, 85
               

               Conread position:
               13-243
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               178
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 74
               

               Conread position:
               13-243
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               9, 185
               

               Conread position:
               13-243
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               177
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               9, 86
               

               Conread position:
               13-243
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               8, 43
               

               Conread position:
               13-243
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               175
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               8, 225
               

               Conread position:
               13-243
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               174
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               8, 221
               

               Conread position:
               15-243
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               184
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               187, 0
               

               Conread position:
               15-243
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               30, 9
               

               Conread position:
               16-182
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               7, 140
               

               Conread position:
               16-243
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               167
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               7, 174
               

               Conread position:
               19-243
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               172
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               142, 0
               

               Conread position:
               21-159
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               21-190
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               21-221
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               28, 101
               

               Conread position:
               21-236
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               169
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 0
               

               Conread position:
               21-241
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               21-243
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               21-243
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               161
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               65, 118
               

               Conread position:
               21-243
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               21-243
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               180, 47
               

               Conread position:
               21-243
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               167
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               212, 0
               

               Conread position:
               22-243
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               171
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               31, 127
               

               Conread position:
               22-243
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               173
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               44, 216
               

               Conread position:
               22-243
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               114, 0
               

               Conread position:
               22-243
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               172
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               211, 0
               

               Conread position:
               23-243
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               27, 145
               

               Conread position:
               26-241
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               154
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               120, 60
               

               Conread position:
               26-243
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               160
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               26-243
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               165
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               41, 31
               

               Conread position:
               26-243
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               138, 159
               

               Conread position:
               26-243
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               43, 35
               

               Conread position:
               26-243
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               206, 0
               

               Conread position:
               26-243
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               113, 0
               

               Conread position:
               26-243
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               165
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               207, 0
               

               Conread position:
               26-243
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               165
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               207, 0
               

               Conread position:
               26-243
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               167
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               207, 0
               

               Conread position:
               26-243
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               187, 135
               

               Conread position:
               26-243
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               164
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               26-243
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               207, 0
               

               Conread position:
               26-243
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               158
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               26-243
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               207, 0
               

               Conread position:
               26-243
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               211, 0
               

               Conread position:
               26-243
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               161
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               26-243
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               131, 0
               

               Conread position:
               26-243
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               113, 0
               

               Conread position:
               26-243
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               163
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               162, 0
               

               Conread position:
               26-243
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               138, 94
               

               Conread position:
               26-243
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               161
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               125, 212
               

               Conread position:
               26-243
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               169
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               35, 74
               

               Conread position:
               26-243
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               35, 167
               

               Conread position:
               27-243
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               151, 163
               

               Conread position:
               27-243
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               164
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               206, 0
               

               Conread position:
               28-243
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               157
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               28-243
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               28-243
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               28-243
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               165
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               139, 210
               

               Conread position:
               29-170
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               104
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               29-243
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               107, 67
               

               Conread position:
               29-243
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               147, 0
               

               Conread position:
               29-243
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               171
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               40-235
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               40-243
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               159
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               156, 5
               

               Conread position:
               50-240
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               149
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               51-235
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               60-243
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               7, 174
               

               Conread position:
               63-243
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               107-243
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               103
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               126, 0
               

               Conread position:
               129-243
               

               Cow position:
               
               

               Alignm length:
               115
               

               Alignm identity:
               93
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               33, 0
               
Show alignments to all cow chromosomes.