Cow genome map
| Conread name: | rmgp011_m12.y1 | 
| Conread position: | 1-159 | 
| Cow position: | chr6:734678-734835 (view UCSC Genome Browser custom track) | 
| Alignm length: | 159 | 
| Alignm identity: | 113 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 25, 0 | 
| Conread position: | 1-196 | 
| Cow position: | chr6:2111451-2111252 (view UCSC Genome Browser custom track) | 
| Alignm length: | 200 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 5e-33 | 
| Alignm gaps (pig, cow): | 28, 0 | 
| Conread position: | 1-232 | 
| Cow position: | chr6:3889976-3889748 (view UCSC Genome Browser custom track) | 
| Alignm length: | 232 | 
| Alignm identity: | 174 | 
| Alignm E-value: | 5.04467e-44 | 
| Alignm gaps (pig, cow): | 20, 0 | 
| Conread position: | 1-241 | 
| Cow position: | chr6:64713061-64713297 (view UCSC Genome Browser custom track) | 
| Alignm length: | 241 | 
| Alignm identity: | 174 | 
| Alignm E-value: | 3e-38 | 
| Alignm gaps (pig, cow): | 21, 0 | 
| Conread position: | 1-241 | 
| Cow position: | chr6:64714628-64714864 (view UCSC Genome Browser custom track) | 
| Alignm length: | 241 | 
| Alignm identity: | 174 | 
| Alignm E-value: | 3e-38 | 
| Alignm gaps (pig, cow): | 21, 0 | 
| Conread position: | 1-242 | 
| Cow position: | chr6:28274494-28274737 (view UCSC Genome Browser custom track) | 
| Alignm length: | 246 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 33, 228 | 
| Conread position: | 1-243 | 
| Cow position: | chr6:52006-51766 (view UCSC Genome Browser custom track) | 
| Alignm length: | 243 | 
| Alignm identity: | 181 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 20, 0 | 
| Conread position: | 1-243 | 
| Cow position: | chr6:2554213-2554458 (view UCSC Genome Browser custom track) | 
| Alignm length: | 247 | 
| Alignm identity: | 175 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 18, 236 | 
| Conread position: | 1-243 | 
| Cow position: | chr6:3278439-3278200 (view UCSC Genome Browser custom track) | 
| Alignm length: | 243 | 
| Alignm identity: | 182 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 20, 0 | 
| Conread position: | 1-243 | 
| Cow position: | chr6:11278182-11277945 (view UCSC Genome Browser custom track) | 
| Alignm length: | 245 | 
| Alignm identity: | 179 | 
| Alignm E-value: | 9e-39 | 
| Alignm gaps (pig, cow): | 25, 42 | 
| Conread position: | 1-243 | 
| Cow position: | chr6:20561598-20561359 (view UCSC Genome Browser custom track) | 
| Alignm length: | 243 | 
| Alignm identity: | 177 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 20, 0 | 
| Conread position: | 1-243 | 
| Cow position: | chr6:27468769-27469009 (view UCSC Genome Browser custom track) | 
| Alignm length: | 243 | 
| Alignm identity: | 179 | 
| Alignm E-value: | 5.04467e-44 | 
| Alignm gaps (pig, cow): | 13, 0 | 
| Conread position: | 1-243 | 
| Cow position: | chr6:27530493-27530248 (view UCSC Genome Browser custom track) | 
| Alignm length: | 247 | 
| Alignm identity: | 180 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 21, 236 | 
| Conread position: | 1-243 | 
| Cow position: | chr6:29311005-29311245 (view UCSC Genome Browser custom track) | 
| Alignm length: | 244 | 
| Alignm identity: | 178 | 
| Alignm E-value: | 4.00001e-41 | 
| Alignm gaps (pig, cow): | 49, 20 | 
| Conread position: | 1-243 | 
| Cow position: | chr6:30275673-30275432 (view UCSC Genome Browser custom track) | 
| Alignm length: | 245 | 
| Alignm identity: | 172 | 
| Alignm E-value: | 5e-34 | 
| Alignm gaps (pig, cow): | 29, 97 | 
| Conread position: | 1-243 | 
| Cow position: | chr6:30478610-30478848 (view UCSC Genome Browser custom track) | 
| Alignm length: | 243 | 
| Alignm identity: | 182 | 
| Alignm E-value: | 5.60519e-45 | 
| Alignm gaps (pig, cow): | 21, 0 | 
| Conread position: | 1-243 | 
| Cow position: | chr6:34893496-34893259 (view UCSC Genome Browser custom track) | 
| Alignm length: | 243 | 
| Alignm identity: | 173 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 20, 0 | 
| Conread position: | 1-243 | 
| Cow position: | chr6:36525556-36525793 (view UCSC Genome Browser custom track) | 
| Alignm length: | 243 | 
| Alignm identity: | 179 | 
| Alignm E-value: | 3.99931e-42 | 
| Alignm gaps (pig, cow): | 20, 0 | 
| Conread position: | 1-243 | 
| Cow position: | chr6:44151040-44150807 (view UCSC Genome Browser custom track) | 
| Alignm length: | 244 | 
| Alignm identity: | 171 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 27, 37 | 
| Conread position: | 1-243 | 
| Cow position: | chr6:47043922-47043681 (view UCSC Genome Browser custom track) | 
| Alignm length: | 245 | 
| Alignm identity: | 182 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 29, 102 | 
| Conread position: | 1-243 | 
| Cow position: | chr6:55544816-55544576 (view UCSC Genome Browser custom track) | 
| Alignm length: | 243 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 4.00001e-41 | 
| Alignm gaps (pig, cow): | 20, 0 | 
| Conread position: | 1-243 | 
| Cow position: | chr6:65880371-65880617 (view UCSC Genome Browser custom track) | 
| Alignm length: | 249 | 
| Alignm identity: | 183 | 
| Alignm E-value: | 9.99995e-41 | 
| Alignm gaps (pig, cow): | 49, 20 | 
| Conread position: | 2-234 | 
| Cow position: | chr6:66194464-66194233 (view UCSC Genome Browser custom track) | 
| Alignm length: | 234 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 5e-33 | 
| Alignm gaps (pig, cow): | 223, 145 | 
| Conread position: | 2-243 | 
| Cow position: | chr6:65908945-65909177 (view UCSC Genome Browser custom track) | 
| Alignm length: | 242 | 
| Alignm identity: | 172 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 17, 0 | 
| Conread position: | 3-242 | 
| Cow position: | chr6:21686405-21686645 (view UCSC Genome Browser custom track) | 
| Alignm length: | 244 | 
| Alignm identity: | 181 | 
| Alignm E-value: | 3.99931e-42 | 
| Alignm gaps (pig, cow): | 26, 62 | 
| Conread position: | 4-242 | 
| Cow position: | chr6:15141665-15141425 (view UCSC Genome Browser custom track) | 
| Alignm length: | 242 | 
| Alignm identity: | 175 | 
| Alignm E-value: | 1e-39 | 
| Alignm gaps (pig, cow): | 30, 232 | 
| Conread position: | 4-243 | 
| Cow position: | chr6:66231330-66231564 (view UCSC Genome Browser custom track) | 
| Alignm length: | 241 | 
| Alignm identity: | 180 | 
| Alignm E-value: | 3.99931e-42 | 
| Alignm gaps (pig, cow): | 24, 32 | 
| Conread position: | 5-243 | 
| Cow position: | chr6:7180153-7179921 (view UCSC Genome Browser custom track) | 
| Alignm length: | 241 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 9e-28 | 
| Alignm gaps (pig, cow): | 26, 153 | 
| Conread position: | 5-243 | 
| Cow position: | chr6:24238557-24238798 (view UCSC Genome Browser custom track) | 
| Alignm length: | 243 | 
| Alignm identity: | 182 | 
| Alignm E-value: | 5.60519e-45 | 
| Alignm gaps (pig, cow): | 24, 232 | 
| Conread position: | 11-236 | 
| Cow position: | chr6:63198616-63198395 (view UCSC Genome Browser custom track) | 
| Alignm length: | 227 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 4e-21 | 
| Alignm gaps (pig, cow): | 24, 11 | 
| Conread position: | 11-243 | 
| Cow position: | chr6:8201253-8201483 (view UCSC Genome Browser custom track) | 
| Alignm length: | 233 | 
| Alignm identity: | 178 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 10, 0 | 
| Conread position: | 12-243 | 
| Cow position: | chr6:65841109-65841345 (view UCSC Genome Browser custom track) | 
| Alignm length: | 237 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 6e-35 | 
| Alignm gaps (pig, cow): | 9, 0 | 
| Conread position: | 13-242 | 
| Cow position: | chr6:17045584-17045814 (view UCSC Genome Browser custom track) | 
| Alignm length: | 232 | 
| Alignm identity: | 179 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 8, 227 | 
| Conread position: | 13-243 | 
| Cow position: | chr6:1823725-1823496 (view UCSC Genome Browser custom track) | 
| Alignm length: | 232 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 1e-39 | 
| Alignm gaps (pig, cow): | 9, 141 | 
| Conread position: | 13-243 | 
| Cow position: | chr6:3488871-3488650 (view UCSC Genome Browser custom track) | 
| Alignm length: | 232 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 9, 172 | 
| Conread position: | 13-243 | 
| Cow position: | chr6:5951714-5951486 (view UCSC Genome Browser custom track) | 
| Alignm length: | 232 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 8e-38 | 
| Alignm gaps (pig, cow): | 8, 30 | 
| Conread position: | 13-243 | 
| Cow position: | chr6:15281022-15280792 (view UCSC Genome Browser custom track) | 
| Alignm length: | 232 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 9.99995e-41 | 
| Alignm gaps (pig, cow): | 9, 221 | 
| Conread position: | 14-232 | 
| Cow position: | chr6:42723398-42723182 (view UCSC Genome Browser custom track) | 
| Alignm length: | 220 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 4.00001e-41 | 
| Alignm gaps (pig, cow): | 18, 183 | 
| Conread position: | 15-243 | 
| Cow position: | chr6:2401766-2402001 (view UCSC Genome Browser custom track) | 
| Alignm length: | 239 | 
| Alignm identity: | 171 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 18, 9 | 
| Conread position: | 19-243 | 
| Cow position: | chr6:28106237-28106017 (view UCSC Genome Browser custom track) | 
| Alignm length: | 225 | 
| Alignm identity: | 173 | 
| Alignm E-value: | 5.60519e-45 | 
| Alignm gaps (pig, cow): | 149, 0 | 
| Conread position: | 19-243 | 
| Cow position: | chr6:39907684-39907900 (view UCSC Genome Browser custom track) | 
| Alignm length: | 225 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 6e-35 | 
| Alignm gaps (pig, cow): | 120, 0 | 
| Conread position: | 19-243 | 
| Cow position: | chr6:65007373-65007594 (view UCSC Genome Browser custom track) | 
| Alignm length: | 226 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 4.00001e-41 | 
| Alignm gaps (pig, cow): | 154, 58 | 
| Conread position: | 19-243 | 
| Cow position: | chr6:68362787-68362565 (view UCSC Genome Browser custom track) | 
| Alignm length: | 225 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 198, 0 | 
| Conread position: | 21-196 | 
| Cow position: | chr6:50497920-50497748 (view UCSC Genome Browser custom track) | 
| Alignm length: | 176 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 4e-31 | 
| Alignm gaps (pig, cow): | 76, 0 | 
| Conread position: | 21-232 | 
| Cow position: | chr6:52735934-52736142 (view UCSC Genome Browser custom track) | 
| Alignm length: | 212 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 5.04467e-44 | 
| Alignm gaps (pig, cow): | 118, 0 | 
| Conread position: | 21-243 | 
| Cow position: | chr6:1384312-1384093 (view UCSC Genome Browser custom track) | 
| Alignm length: | 223 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 150, 0 | 
| Conread position: | 21-243 | 
| Cow position: | chr6:6476920-6476704 (view UCSC Genome Browser custom track) | 
| Alignm length: | 223 | 
| Alignm identity: | 173 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 52, 0 | 
| Conread position: | 21-243 | 
| Cow position: | chr6:6566142-6566363 (view UCSC Genome Browser custom track) | 
| Alignm length: | 223 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 3.99931e-42 | 
| Alignm gaps (pig, cow): | 212, 0 | 
| Conread position: | 21-243 | 
| Cow position: | chr6:10054154-10054365 (view UCSC Genome Browser custom track) | 
| Alignm length: | 224 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 143, 73 | 
| Conread position: | 21-243 | 
| Cow position: | chr6:12093323-12093106 (view UCSC Genome Browser custom track) | 
| Alignm length: | 223 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 4.00001e-41 | 
| Alignm gaps (pig, cow): | 65, 0 | 
| Conread position: | 21-243 | 
| Cow position: | chr6:21971207-21971424 (view UCSC Genome Browser custom track) | 
| Alignm length: | 223 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 77, 0 | 
| Conread position: | 21-243 | 
| Cow position: | chr6:38231809-38232026 (view UCSC Genome Browser custom track) | 
| Alignm length: | 224 | 
| Alignm identity: | 174 | 
| Alignm E-value: | 5.60519e-45 | 
| Alignm gaps (pig, cow): | 202, 138 | 
| Conread position: | 21-243 | 
| Cow position: | chr6:39437173-39437394 (view UCSC Genome Browser custom track) | 
| Alignm length: | 223 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 212, 0 | 
| Conread position: | 21-243 | 
| Cow position: | chr6:65900379-65900159 (view UCSC Genome Browser custom track) | 
| Alignm length: | 223 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 5.60519e-45 | 
| Alignm gaps (pig, cow): | 55, 0 | 
| Conread position: | 22-243 | 
| Cow position: | chr6:19453464-19453679 (view UCSC Genome Browser custom track) | 
| Alignm length: | 222 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 1.00053e-42 | 
| Alignm gaps (pig, cow): | 63, 0 | 
| Conread position: | 22-243 | 
| Cow position: | chr6:35877183-35876966 (view UCSC Genome Browser custom track) | 
| Alignm length: | 222 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 5e-34 | 
| Alignm gaps (pig, cow): | 67, 0 | 
| Conread position: | 22-243 | 
| Cow position: | chr6:59919743-59919528 (view UCSC Genome Browser custom track) | 
| Alignm length: | 223 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 7e-36 | 
| Alignm gaps (pig, cow): | 163, 112 | 
| Conread position: | 24-243 | 
| Cow position: | chr6:33388351-33388588 (view UCSC Genome Browser custom track) | 
| Alignm length: | 238 | 
| Alignm identity: | 174 | 
| Alignm E-value: | 4e-32 | 
| Alignm gaps (pig, cow): | 18, 0 | 
| Conread position: | 25-243 | 
| Cow position: | chr6:43795177-43794958 (view UCSC Genome Browser custom track) | 
| Alignm length: | 222 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 33, 43 | 
| Conread position: | 26-243 | 
| Cow position: | chr6:331944-331715 (view UCSC Genome Browser custom track) | 
| Alignm length: | 231 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 40, 220 | 
| Conread position: | 26-243 | 
| Cow position: | chr6:1405697-1405486 (view UCSC Genome Browser custom track) | 
| Alignm length: | 218 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 112, 0 | 
| Conread position: | 26-243 | 
| Cow position: | chr6:2374246-2374457 (view UCSC Genome Browser custom track) | 
| Alignm length: | 218 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 6e-35 | 
| Alignm gaps (pig, cow): | 135, 0 | 
| Conread position: | 26-243 | 
| Cow position: | chr6:6935590-6935374 (view UCSC Genome Browser custom track) | 
| Alignm length: | 218 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 9.99995e-41 | 
| Alignm gaps (pig, cow): | 207, 0 | 
| Conread position: | 26-243 | 
| Cow position: | chr6:7141930-7141721 (view UCSC Genome Browser custom track) | 
| Alignm length: | 218 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 8e-38 | 
| Alignm gaps (pig, cow): | 19, 0 | 
| Conread position: | 26-243 | 
| Cow position: | chr6:13103594-13103809 (view UCSC Genome Browser custom track) | 
| Alignm length: | 218 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 74, 0 | 
| Conread position: | 26-243 | 
| Cow position: | chr6:17598747-17598526 (view UCSC Genome Browser custom track) | 
| Alignm length: | 223 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 138, 212 | 
| Conread position: | 26-243 | 
| Cow position: | chr6:26671330-26671110 (view UCSC Genome Browser custom track) | 
| Alignm length: | 225 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 34, 126 | 
| Conread position: | 26-243 | 
| Cow position: | chr6:27169111-27169327 (view UCSC Genome Browser custom track) | 
| Alignm length: | 218 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 9.99995e-41 | 
| Alignm gaps (pig, cow): | 207, 0 | 
| Conread position: | 26-243 | 
| Cow position: | chr6:28062883-28063092 (view UCSC Genome Browser custom track) | 
| Alignm length: | 218 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 6e-35 | 
| Alignm gaps (pig, cow): | 131, 0 | 
| Conread position: | 26-243 | 
| Cow position: | chr6:28491979-28491763 (view UCSC Genome Browser custom track) | 
| Alignm length: | 218 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 9.99995e-41 | 
| Alignm gaps (pig, cow): | 207, 0 | 
| Conread position: | 26-243 | 
| Cow position: | chr6:34126886-34127102 (view UCSC Genome Browser custom track) | 
| Alignm length: | 218 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 9e-39 | 
| Alignm gaps (pig, cow): | 207, 0 | 
| Conread position: | 26-243 | 
| Cow position: | chr6:40274794-40275009 (view UCSC Genome Browser custom track) | 
| Alignm length: | 218 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 121, 0 | 
| Conread position: | 26-243 | 
| Cow position: | chr6:41757451-41757235 (view UCSC Genome Browser custom track) | 
| Alignm length: | 218 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 9.99995e-41 | 
| Alignm gaps (pig, cow): | 207, 0 | 
| Conread position: | 26-243 | 
| Cow position: | chr6:42564482-42564694 (view UCSC Genome Browser custom track) | 
| Alignm length: | 218 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 5e-23 | 
| Alignm gaps (pig, cow): | 67, 0 | 
| Conread position: | 26-243 | 
| Cow position: | chr6:43617250-43617467 (view UCSC Genome Browser custom track) | 
| Alignm length: | 219 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 108, 208 | 
| Conread position: | 26-243 | 
| Cow position: | chr6:44028590-44028801 (view UCSC Genome Browser custom track) | 
| Alignm length: | 218 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 48, 0 | 
| Conread position: | 26-243 | 
| Cow position: | chr6:45671804-45672015 (view UCSC Genome Browser custom track) | 
| Alignm length: | 218 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 119, 0 | 
| Conread position: | 26-243 | 
| Cow position: | chr6:57870469-57870253 (view UCSC Genome Browser custom track) | 
| Alignm length: | 218 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 9e-39 | 
| Alignm gaps (pig, cow): | 207, 0 | 
| Conread position: | 26-243 | 
| Cow position: | chr6:65822597-65822376 (view UCSC Genome Browser custom track) | 
| Alignm length: | 224 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 5e-33 | 
| Alignm gaps (pig, cow): | 126, 35 | 
| Conread position: | 26-243 | 
| Cow position: | chr6:68026316-68026533 (view UCSC Genome Browser custom track) | 
| Alignm length: | 219 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 138, 208 | 
| Conread position: | 28-196 | 
| Cow position: | chr6:13276096-13276265 (view UCSC Genome Browser custom track) | 
| Alignm length: | 170 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 4e-31 | 
| Alignm gaps (pig, cow): | 136, 0 | 
| Conread position: | 28-236 | 
| Cow position: | chr6:42926911-42927131 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 8e-38 | 
| Alignm gaps (pig, cow): | 19, 0 | 
| Conread position: | 28-243 | 
| Cow position: | chr6:65927482-65927690 (view UCSC Genome Browser custom track) | 
| Alignm length: | 216 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 108, 0 | 
| Conread position: | 29-243 | 
| Cow position: | chr6:701490-701704 (view UCSC Genome Browser custom track) | 
| Alignm length: | 216 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 1.00053e-42 | 
| Alignm gaps (pig, cow): | 27, 205 | 
| Conread position: | 29-243 | 
| Cow position: | chr6:33459118-33459336 (view UCSC Genome Browser custom track) | 
| Alignm length: | 222 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 7e-36 | 
| Alignm gaps (pig, cow): | 69, 151 | 
| Conread position: | 36-196 | 
| Cow position: | chr6:13318141-13317982 (view UCSC Genome Browser custom track) | 
| Alignm length: | 161 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 46, 0 | 
| Conread position: | 36-243 | 
| Cow position: | chr6:913177-913382 (view UCSC Genome Browser custom track) | 
| Alignm length: | 208 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 9.99995e-41 | 
| Alignm gaps (pig, cow): | 116, 0 | 
| Conread position: | 37-183 | 
| Cow position: | chr6:10640338-10640482 (view UCSC Genome Browser custom track) | 
| Alignm length: | 148 | 
| Alignm identity: | 112 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 5, 100 | 
| Conread position: | 37-235 | 
| Cow position: | chr6:35421014-35420826 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 38, 0 | 
| Conread position: | 37-243 | 
| Cow position: | chr6:13943459-13943665 (view UCSC Genome Browser custom track) | 
| Alignm length: | 208 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 1e-39 | 
| Alignm gaps (pig, cow): | 127, 197 | 
| Conread position: | 39-243 | 
| Cow position: | chr6:58409360-58409159 (view UCSC Genome Browser custom track) | 
| Alignm length: | 205 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 7e-37 | 
| Alignm gaps (pig, cow): | 108, 0 | 
| Conread position: | 51-243 | 
| Cow position: | chr6:8761741-8761550 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 182, 0 | 
| Conread position: | 71-232 | 
| Cow position: | chr6:21836522-21836359 (view UCSC Genome Browser custom track) | 
| Alignm length: | 165 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 15, 63 | 
| Conread position: | 93-243 | 
| Cow position: | chr6:13978123-13978273 (view UCSC Genome Browser custom track) | 
| Alignm length: | 152 | 
| Alignm identity: | 111 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 10, 141 | 
Show alignments to all cow chromosomes.
