Cow genome map


           Conread name:
           rmgp011_m12.y1
        

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               113
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               1-196
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               1-232
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               174
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               1-241
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               1-241
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               1-242
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               33, 228
               

               Conread position:
               1-243
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               181
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               1-243
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               18, 236
               

               Conread position:
               1-243
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               182
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               1-243
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               179
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               25, 42
               

               Conread position:
               1-243
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               177
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               1-243
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               179
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               1-243
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               180
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               21, 236
               

               Conread position:
               1-243
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               178
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               49, 20
               

               Conread position:
               1-243
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               172
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               29, 97
               

               Conread position:
               1-243
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               182
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               1-243
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               1-243
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               179
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               1-243
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               27, 37
               

               Conread position:
               1-243
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               182
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               29, 102
               

               Conread position:
               1-243
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               176
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               1-243
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               183
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               49, 20
               

               Conread position:
               2-234
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               223, 145
               

               Conread position:
               2-243
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               3-242
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               181
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               26, 62
               

               Conread position:
               4-242
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               30, 232
               

               Conread position:
               4-243
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               180
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               24, 32
               

               Conread position:
               5-243
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               167
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               26, 153
               

               Conread position:
               5-243
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               182
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               24, 232
               

               Conread position:
               11-236
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               24, 11
               

               Conread position:
               11-243
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               178
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               12-243
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               169
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               13-242
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               179
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 227
               

               Conread position:
               13-243
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               9, 141
               

               Conread position:
               13-243
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               9, 172
               

               Conread position:
               13-243
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               169
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               8, 30
               

               Conread position:
               13-243
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               170
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               9, 221
               

               Conread position:
               14-232
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               166
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               18, 183
               

               Conread position:
               15-243
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               18, 9
               

               Conread position:
               19-243
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               173
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               149, 0
               

               Conread position:
               19-243
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               165
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               19-243
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               170
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               154, 58
               

               Conread position:
               19-243
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               176
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               198, 0
               

               Conread position:
               21-196
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               21-232
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               164
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               118, 0
               

               Conread position:
               21-243
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               150, 0
               

               Conread position:
               21-243
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               173
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               21-243
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               166
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               212, 0
               

               Conread position:
               21-243
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               143, 73
               

               Conread position:
               21-243
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               169
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               21-243
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               170
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               21-243
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               174
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               202, 138
               

               Conread position:
               21-243
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               170
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               212, 0
               

               Conread position:
               21-243
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               170
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               22-243
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               170
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               22-243
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               22-243
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               164
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               163, 112
               

               Conread position:
               24-243
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               25-243
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               33, 43
               

               Conread position:
               26-243
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               40, 220
               

               Conread position:
               26-243
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               26-243
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               160
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               135, 0
               

               Conread position:
               26-243
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               162
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               207, 0
               

               Conread position:
               26-243
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               165
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               26-243
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               164
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               26-243
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               138, 212
               

               Conread position:
               26-243
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               34, 126
               

               Conread position:
               26-243
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               162
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               207, 0
               

               Conread position:
               26-243
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               160
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               131, 0
               

               Conread position:
               26-243
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               162
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               207, 0
               

               Conread position:
               26-243
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               160
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               207, 0
               

               Conread position:
               26-243
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               164
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               26-243
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               162
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               207, 0
               

               Conread position:
               26-243
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               26-243
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               108, 208
               

               Conread position:
               26-243
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               26-243
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               26-243
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               160
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               207, 0
               

               Conread position:
               26-243
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               126, 35
               

               Conread position:
               26-243
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               138, 208
               

               Conread position:
               28-196
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               136, 0
               

               Conread position:
               28-236
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               169
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               28-243
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               29-243
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               164
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               27, 205
               

               Conread position:
               29-243
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               166
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               69, 151
               

               Conread position:
               36-196
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               36-243
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               158
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               37-183
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               5, 100
               

               Conread position:
               37-235
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               37-243
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               127, 197
               

               Conread position:
               39-243
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               153
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               51-243
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               182, 0
               

               Conread position:
               71-232
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               15, 63
               

               Conread position:
               93-243
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               10, 141
               
Show alignments to all cow chromosomes.