Cow genome map

Conread name: rmgp011_m12.y1

Conread position: 1-184
Cow position: chr8:24420997-24420818 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 137
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 28, 35

Conread position: 1-211
Cow position: chr8:42161862-42161660 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 159
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 23, 35

Conread position: 1-223
Cow position: chr8:44121645-44121876 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 169
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 24, 176

Conread position: 1-241
Cow position: chr8:60059992-60060230 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 1-243
Cow position: chr8:8910024-8910254 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 172
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 20, 0

Conread position: 1-243
Cow position: chr8:10743831-10743598 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 172
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 29, 81

Conread position: 1-243
Cow position: chr8:13808114-13808350 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 172
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 15, 72

Conread position: 1-243
Cow position: chr8:19173977-19173742 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 176
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 21, 0

Conread position: 1-243
Cow position: chr8:23770428-23770667 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 180
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 21, 6

Conread position: 1-243
Cow position: chr8:27984013-27983770 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 18

Conread position: 1-243
Cow position: chr8:32319759-32319519 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 1-243
Cow position: chr8:33588166-33588406 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 172
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 21, 0

Conread position: 1-243
Cow position: chr8:36636754-36636514 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 177
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 20, 0

Conread position: 1-243
Cow position: chr8:36637869-36637629 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 177
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 20, 0

Conread position: 1-243
Cow position: chr8:47074058-47074297 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 168
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 49, 18

Conread position: 1-243
Cow position: chr8:49214217-49214457 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 178
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 20, 0

Conread position: 1-243
Cow position: chr8:50993580-50993816 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 172
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 20, 0

Conread position: 1-243
Cow position: chr8:61198328-61198087 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 176
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 85, 20

Conread position: 2-242
Cow position: chr8:25777085-25776848 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 178
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 19, 0

Conread position: 2-243
Cow position: chr8:17310806-17311046 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 178
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 32, 100

Conread position: 2-243
Cow position: chr8:46945339-46945096 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 177
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 66, 17

Conread position: 4-243
Cow position: chr8:33429710-33429944 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 178
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 32, 0

Conread position: 8-243
Cow position: chr8:44244781-44244547 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 0

Conread position: 10-243
Cow position: chr8:13735450-13735681 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 13-196
Cow position: chr8:3784379-3784562 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 134
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 8, 138

Conread position: 13-231
Cow position: chr8:8402401-8402182 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 161
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 9, 0

Conread position: 13-243
Cow position: chr8:3857214-3856986 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 171
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 8, 176

Conread position: 13-243
Cow position: chr8:45795944-45795716 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 174
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 9, 97

Conread position: 14-235
Cow position: chr8:44077219-44076996 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 169
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 142, 57

Conread position: 14-243
Cow position: chr8:4686194-4686423 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 171
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 7, 220

Conread position: 15-183
Cow position: chr8:45188874-45189043 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 128
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 142, 20

Conread position: 15-211
Cow position: chr8:11831548-11831737 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 144
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 7, 13

Conread position: 15-243
Cow position: chr8:32930303-32930538 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 178
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 7, 193

Conread position: 19-235
Cow position: chr8:45317315-45317102 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 167
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 28, 0

Conread position: 19-243
Cow position: chr8:8596089-8595866 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 0

Conread position: 19-243
Cow position: chr8:45448257-45448480 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 168
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 35, 87

Conread position: 20-243
Cow position: chr8:11821120-11821344 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 167
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 138, 214

Conread position: 21-180
Cow position: chr8:5873444-5873605 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 121
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 40, 0

Conread position: 21-210
Cow position: chr8:8316822-8316633 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 141
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 143, 177

Conread position: 21-215
Cow position: chr8:42467211-42467392 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 144
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 22, 0

Conread position: 21-242
Cow position: chr8:38607714-38607476 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 179
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 67, 41

Conread position: 21-242
Cow position: chr8:59263086-59262867 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 164
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 121, 0

Conread position: 21-243
Cow position: chr8:2171572-2171351 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 168
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 212, 0

Conread position: 21-243
Cow position: chr8:8229977-8229756 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 0

Conread position: 21-243
Cow position: chr8:8904688-8904486 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 160
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 15, 0

Conread position: 21-243
Cow position: chr8:11801050-11801263 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 167
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 58, 0

Conread position: 21-243
Cow position: chr8:11970754-11970533 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 59

Conread position: 21-243
Cow position: chr8:19050294-19050515 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 166
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 212, 0

Conread position: 21-243
Cow position: chr8:29441020-29440799 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 169
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 212, 0

Conread position: 21-243
Cow position: chr8:42658653-42658431 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 150
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 50, 36

Conread position: 21-243
Cow position: chr8:47884834-47885054 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 0

Conread position: 22-228
Cow position: chr8:47670266-47670471 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 155
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 150, 0

Conread position: 22-232
Cow position: chr8:11757530-11757733 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 160
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 135, 0

Conread position: 22-235
Cow position: chr8:25542406-25542616 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 156
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 128, 0

Conread position: 22-242
Cow position: chr8:53427145-53427355 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 168
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 28, 10

Conread position: 22-243
Cow position: chr8:19328763-19328983 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 167
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 205, 0

Conread position: 22-243
Cow position: chr8:45161543-45161331 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 160
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 33, 0

Conread position: 23-243
Cow position: chr8:9540680-9540462 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 171
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 27, 139

Conread position: 24-243
Cow position: chr8:44693116-44693323 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 168
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 96, 0

Conread position: 24-243
Cow position: chr8:47662516-47662298 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 164
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 209, 0

Conread position: 25-243
Cow position: chr8:8518762-8518552 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 162
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 114, 0

Conread position: 26-242
Cow position: chr8:8557317-8557109 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 159
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 131, 0

Conread position: 26-243
Cow position: chr8:2885564-2885772 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 162
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 113, 0

Conread position: 26-243
Cow position: chr8:6065904-6065695 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 162
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 113, 0

Conread position: 26-243
Cow position: chr8:9274834-9275050 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 159
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 207, 0

Conread position: 26-243
Cow position: chr8:9735060-9735276 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 161
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 207, 0

Conread position: 26-243
Cow position: chr8:10748197-10748408 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 158
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 113, 0

Conread position: 26-243
Cow position: chr8:12504813-12505025 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 161
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 76, 72

Conread position: 26-243
Cow position: chr8:22572483-22572267 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 160
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 138, 64

Conread position: 26-243
Cow position: chr8:26006950-26006739 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 153
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 134, 0

Conread position: 26-243
Cow position: chr8:27578222-27578435 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 166
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 40, 32

Conread position: 26-243
Cow position: chr8:32439629-32439414 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 162
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 190, 0

Conread position: 26-243
Cow position: chr8:32632202-32631995 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 155
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 21, 0

Conread position: 26-243
Cow position: chr8:37657448-37657239 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 159
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 113, 0

Conread position: 26-243
Cow position: chr8:37931108-37931324 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 161
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 207, 0

Conread position: 26-243
Cow position: chr8:47069997-47069779 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 162
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 120, 209

Conread position: 28-211
Cow position: chr8:23216568-23216752 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 137
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 27, 0

Conread position: 28-243
Cow position: chr8:1318855-1319077 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 162
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 74, 70

Conread position: 28-243
Cow position: chr8:8656401-8656188 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 159
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 145, 0

Conread position: 29-186
Cow position: chr8:38087940-38088097 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 120
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 29-243
Cow position: chr8:25522213-25522426 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 162
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 204, 0

Conread position: 29-243
Cow position: chr8:27924938-27925153 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 166
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 135, 206

Conread position: 29-243
Cow position: chr8:46458910-46458706 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 150
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 121, 29

Conread position: 36-243
Cow position: chr8:24916510-24916309 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 157
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 120, 0

Conread position: 36-243
Cow position: chr8:38390190-38390395 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 159
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 132, 0

Conread position: 37-175
Cow position: chr8:51860169-51860028 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 111
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 8, 0

Conread position: 44-243
Cow position: chr8:1154482-1154280 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 147
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 14, 58

Conread position: 45-240
Cow position: chr8:61035522-61035340 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 144
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 138, 0

Conread position: 63-243
Cow position: chr8:39196367-39196188 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 142
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 170, 0

Conread position: 91-235
Cow position: chr8:46091982-46091838 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 101-243
Cow position: chr8:50289263-50289123 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 49, 0

Conread position: 121-243
Cow position: chr8:14592280-14592159 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 94
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 111, 0

Show alignments to all cow chromosomes.