Cow genome map

Conread name: rmgp21_k21.y1

Conread position: 1-316
Cow position: chrX:11073025-11073329 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 2-229
Cow position: chrX:2003711-2003933 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 158
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 83, 24

Conread position: 5-319
Cow position: chrX:39558189-39558491 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 11-261
Cow position: chrX:33204813-33205053 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 171
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 17, 0

Conread position: 20-311
Cow position: chrX:41871215-41870937 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 198
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 147, 0

Conread position: 20-314
Cow position: chrX:34565431-34565144 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 26

Conread position: 23-198
Cow position: chrX:20743749-20743576 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 135
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 144, 0

Conread position: 23-207
Cow position: chrX:17956836-17956660 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 143
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 9, 71

Conread position: 23-302
Cow position: chrX:45113766-45113493 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 206
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 54, 148

Conread position: 23-306
Cow position: chrX:31294427-31294688 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 215
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 113, 119

Conread position: 23-309
Cow position: chrX:22466101-22465819 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 205
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 12, 43

Conread position: 23-320
Cow position: chrX:30543139-30543432 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 210
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 157, 141

Conread position: 23-321
Cow position: chrX:38999993-38999700 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 197
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 218, 54

Conread position: 23-325
Cow position: chrX:16416644-16416360 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 23-325
Cow position: chrX:17042827-17042544 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 202
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 239, 59

Conread position: 23-325
Cow position: chrX:25338332-25338033 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 210
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 150, 54

Conread position: 23-325
Cow position: chrX:25419008-25419308 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 201
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 15, 32

Conread position: 27-166
Cow position: chrX:32910240-32910106 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 47, 0

Conread position: 27-251
Cow position: chrX:36866313-36866092 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 161
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 37, 0

Conread position: 27-262
Cow position: chrX:31515315-31515079 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 158

Conread position: 27-293
Cow position: chrX:35269002-35268764 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 197
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 83, 0

Conread position: 27-304
Cow position: chrX:1514278-1514536 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 27-305
Cow position: chrX:43115291-43115021 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 185
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 253, 87

Conread position: 27-311
Cow position: chrX:42492383-42492651 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 27-316
Cow position: chrX:25035241-25035525 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 210
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 75, 84

Conread position: 27-316
Cow position: chrX:41674246-41673967 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 207
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 20, 142

Conread position: 27-319
Cow position: chrX:32420353-32420074 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 209
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 261, 108

Conread position: 27-323
Cow position: chrX:17662457-17662741 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 84

Conread position: 27-325
Cow position: chrX:47054384-47054677 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 206
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 149, 83

Conread position: 28-172
Cow position: chrX:6222989-6223132 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 107
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 6, 0

Conread position: 28-221
Cow position: chrX:22392845-22393035 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 138
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 18, 0

Conread position: 28-222
Cow position: chrX:29115846-29115661 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 139
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 24, 72

Conread position: 28-252
Cow position: chrX:39220219-39220000 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 0

Conread position: 28-319
Cow position: chrX:24365683-24365970 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 209
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 140, 47

Conread position: 29-320
Cow position: chrX:11082483-11082759 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 0

Conread position: 30-154
Cow position: chrX:23266553-23266429 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 30-162
Cow position: chrX:19018693-19018825 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 100
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 30-162
Cow position: chrX:38301947-38301815 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 107
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 30-162
Cow position: chrX:41810030-41810161 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 102
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 123, 0

Conread position: 30-163
Cow position: chrX:1122409-1122538 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 108
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 80, 0

Conread position: 30-165
Cow position: chrX:11653908-11653767 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 113
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 77, 0

Conread position: 30-165
Cow position: chrX:24054815-24054674 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 114
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 100, 0

Conread position: 30-165
Cow position: chrX:38722260-38722124 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 101
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 108, 0

Conread position: 30-166
Cow position: chrX:29501746-29501879 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 103
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 104, 0

Conread position: 30-168
Cow position: chrX:39180096-39180233 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 102
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 30-169
Cow position: chrX:27074913-27075052 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 103
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 30-169
Cow position: chrX:31829323-31829462 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 106
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 30-170
Cow position: chrX:4559871-4559737 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 75, 0

Conread position: 30-171
Cow position: chrX:27668820-27668960 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 106
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 129, 0

Conread position: 30-172
Cow position: chrX:3806820-3806679 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 113
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 134, 0

Conread position: 30-172
Cow position: chrX:29733454-29733596 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 111
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 30-174
Cow position: chrX:27145742-27145599 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 107
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 141, 0

Conread position: 30-178
Cow position: chrX:38587705-38587853 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 108
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 30-180
Cow position: chrX:21665103-21665256 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 115
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 99, 113

Conread position: 30-180
Cow position: chrX:29478861-29478712 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 111
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 80, 0

Conread position: 30-184
Cow position: chrX:11762863-11763016 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 137, 0

Conread position: 30-188
Cow position: chrX:35276123-35275968 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 115
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 107, 0

Conread position: 30-189
Cow position: chrX:42449876-42450033 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 118
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 140, 0

Conread position: 30-193
Cow position: chrX:25412043-25411886 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 126
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 20, 0

Conread position: 30-198
Cow position: chrX:32318444-32318277 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 120
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 78, 142

Conread position: 30-202
Cow position: chrX:18046534-18046365 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 126
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 143, 42

Conread position: 30-203
Cow position: chrX:35759798-35759970 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 126
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 138, 148

Conread position: 30-205
Cow position: chrX:23498542-23498711 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 136
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 72, 0

Conread position: 30-208
Cow position: chrX:4645775-4645948 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 36, 28

Conread position: 30-208
Cow position: chrX:23188646-23188813 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 138
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 80, 0

Conread position: 30-210
Cow position: chrX:42894064-42893879 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 147
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 106, 0

Conread position: 30-214
Cow position: chrX:27306592-27306410 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 128
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 134, 0

Conread position: 30-215
Cow position: chrX:20678004-20678196 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 149
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 138, 89

Conread position: 30-217
Cow position: chrX:29553423-29553240 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 144
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 134, 0

Conread position: 30-221
Cow position: chrX:19943098-19943286 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 149
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 62, 0

Conread position: 30-225
Cow position: chrX:18964691-18964877 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 148
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 80, 0

Conread position: 30-227
Cow position: chrX:44339187-44339379 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 144
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 148, 82

Conread position: 30-229
Cow position: chrX:31626840-31627038 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 154
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 149, 73

Conread position: 30-230
Cow position: chrX:22914904-22915094 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 155
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 41, 0

Conread position: 30-232
Cow position: chrX:27511566-27511367 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 156
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 170, 138

Conread position: 30-232
Cow position: chrX:39352923-39352720 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 154
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 124, 67

Conread position: 30-232
Cow position: chrX:46429681-46429881 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 148
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 199, 147

Conread position: 30-234
Cow position: chrX:4109322-4109128 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 146
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 116, 0

Conread position: 30-235
Cow position: chrX:126905-126706 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 146
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 146, 78

Conread position: 30-235
Cow position: chrX:6463736-6463548 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 162
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 80, 0

Conread position: 30-235
Cow position: chrX:15820732-15820534 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 150
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 65, 0

Conread position: 30-236
Cow position: chrX:12437134-12437334 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 144
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 52, 0

Conread position: 30-241
Cow position: chrX:19097081-19097291 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 162
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 85, 62

Conread position: 30-244
Cow position: chrX:25037125-25036915 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 161
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 133, 0

Conread position: 30-250
Cow position: chrX:4152893-4153113 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 153
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 153, 137

Conread position: 30-250
Cow position: chrX:4515829-4515606 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 172
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 17, 52

Conread position: 30-251
Cow position: chrX:41270847-41271077 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 169
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 5, 0

Conread position: 30-252
Cow position: chrX:11317831-11318047 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 150
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 21, 0

Conread position: 30-255
Cow position: chrX:16575250-16575040 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 161
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 140, 0

Conread position: 30-258
Cow position: chrX:23562770-23562549 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 0

Conread position: 30-259
Cow position: chrX:36514754-36514981 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 139

Conread position: 30-260
Cow position: chrX:40680752-40680523 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 0

Conread position: 30-261
Cow position: chrX:45883833-45884064 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 168
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 15, 22

Conread position: 30-262
Cow position: chrX:42855596-42855365 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 182

Conread position: 30-263
Cow position: chrX:1466300-1466070 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 155
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 149, 0

Conread position: 30-263
Cow position: chrX:10516391-10516165 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 172
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 147, 134

Conread position: 30-263
Cow position: chrX:12290857-12290637 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 161
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 136, 0

Conread position: 30-263
Cow position: chrX:27261330-27261097 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 177
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 75, 140

Conread position: 30-263
Cow position: chrX:29050386-29050156 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 169
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 15, 73

Conread position: 30-263
Cow position: chrX:33654706-33654932 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 165
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 183, 137

Conread position: 30-263
Cow position: chrX:37129407-37129178 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 168
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 134, 0

Conread position: 30-263
Cow position: chrX:38208407-38208633 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 165
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 15, 21

Conread position: 30-264
Cow position: chrX:5900600-5900377 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 177
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 80, 0

Conread position: 30-264
Cow position: chrX:12095634-12095865 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 176
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 102, 143

Conread position: 30-264
Cow position: chrX:20168695-20168466 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 171
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 20, 0

Conread position: 30-264
Cow position: chrX:29549413-29549639 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 169
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 26, 0

Conread position: 30-265
Cow position: chrX:40108380-40108603 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 171
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 102, 89

Conread position: 30-267
Cow position: chrX:17966479-17966253 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 168
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 173, 134

Conread position: 30-276
Cow position: chrX:21328051-21327802 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 186
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 88, 158

Conread position: 30-277
Cow position: chrX:16348434-16348672 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 188
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 144, 16

Conread position: 30-280
Cow position: chrX:169408-169645 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 184
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 85, 0

Conread position: 30-286
Cow position: chrX:29194368-29194123 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 190
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 30, 65

Conread position: 30-288
Cow position: chrX:9650886-9651138 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 179
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 81, 90

Conread position: 30-288
Cow position: chrX:14973608-14973854 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 189
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 94, 0

Conread position: 30-288
Cow position: chrX:38654303-38654543 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 191
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 59, 0

Conread position: 30-291
Cow position: chrX:24331914-24331662 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 185
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 36, 31

Conread position: 30-293
Cow position: chrX:5679434-5679684 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 196
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 69, 0

Conread position: 30-295
Cow position: chrX:4403455-4403194 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 181
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 100, 144

Conread position: 30-300
Cow position: chrX:34504911-34505172 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 182
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 60, 24

Conread position: 30-304
Cow position: chrX:5017284-5017543 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 202
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 37, 0

Conread position: 30-304
Cow position: chrX:27393888-27394149 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 264, 138

Conread position: 30-304
Cow position: chrX:29121185-29120917 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 0

Conread position: 30-304
Cow position: chrX:38728872-38728608 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 206
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 99, 107

Conread position: 30-304
Cow position: chrX:48044378-48044641 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 195
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 26, 0

Conread position: 30-305
Cow position: chrX:6260011-6260289 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 204
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 187, 92

Conread position: 30-305
Cow position: chrX:6690122-6690383 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 0

Conread position: 30-305
Cow position: chrX:15147059-15147319 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 205
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 80, 0

Conread position: 30-305
Cow position: chrX:45875530-45875261 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 197
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 137, 0

Conread position: 30-306
Cow position: chrX:878242-878506 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 198
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 154, 0

Conread position: 30-306
Cow position: chrX:37489856-37489595 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 204
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 24, 0

Conread position: 30-307
Cow position: chrX:40685190-40685463 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 193
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 130, 151

Conread position: 30-308
Cow position: chrX:30840684-30840423 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 207
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 88, 140

Conread position: 30-310
Cow position: chrX:28865868-28866131 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 204
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 119, 80

Conread position: 30-310
Cow position: chrX:37119730-37119460 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 204
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 270, 14

Conread position: 30-310
Cow position: chrX:41027297-41027022 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 136

Conread position: 30-311
Cow position: chrX:6414179-6413908 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 188
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 240, 62

Conread position: 30-311
Cow position: chrX:32431762-32431491 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 189
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 154, 0

Conread position: 30-311
Cow position: chrX:33466762-33466475 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 210
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 76, 159

Conread position: 30-311
Cow position: chrX:34238859-34238584 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 93

Conread position: 30-311
Cow position: chrX:37986363-37986097 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 194
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 63, 0

Conread position: 30-311
Cow position: chrX:38964246-38963970 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 137

Conread position: 30-312
Cow position: chrX:42873523-42873255 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 214
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 42, 84

Conread position: 30-314
Cow position: chrX:1175852-1176118 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 197
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 34, 0

Conread position: 30-314
Cow position: chrX:4632717-4632991 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 205
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 26, 137

Conread position: 30-314
Cow position: chrX:13177338-13177604 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 198
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 108, 0

Conread position: 30-314
Cow position: chrX:13868841-13868554 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 204
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 19, 113

Conread position: 30-314
Cow position: chrX:17888285-17888551 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 0

Conread position: 30-314
Cow position: chrX:25815764-25816039 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 209
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 134, 21

Conread position: 30-314
Cow position: chrX:27705724-27705445 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 119

Conread position: 30-314
Cow position: chrX:31436613-31436339 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 197
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 5, 136

Conread position: 30-314
Cow position: chrX:34554861-34554585 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 190
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 125, 0

Conread position: 30-314
Cow position: chrX:37955985-37955694 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 214
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 138, 169

Conread position: 30-314
Cow position: chrX:45429884-45430156 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 189
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 258, 134

Conread position: 30-314
Cow position: chrX:46770825-46771107 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 199
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 36, 21

Conread position: 30-315
Cow position: chrX:27228265-27227983 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 136

Conread position: 30-315
Cow position: chrX:48385231-48385500 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 199
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 106, 42

Conread position: 30-316
Cow position: chrX:9365538-9365815 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 0

Conread position: 30-316
Cow position: chrX:11614831-11614558 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 0

Conread position: 30-316
Cow position: chrX:14883816-14884099 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 197
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 5, 111

Conread position: 30-318
Cow position: chrX:11717645-11717927 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 217

Conread position: 30-319
Cow position: chrX:1503465-1503194 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 212
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 138, 78

Conread position: 30-319
Cow position: chrX:9416546-9416837 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 212
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 143, 110

Conread position: 30-319
Cow position: chrX:9635053-9635325 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 202
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 80, 0

Conread position: 30-319
Cow position: chrX:11633820-11633534 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 0

Conread position: 30-319
Cow position: chrX:13382463-13382185 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 69

Conread position: 30-319
Cow position: chrX:17726114-17725830 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 203
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 10, 91

Conread position: 30-319
Cow position: chrX:20697471-20697751 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 205
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 259, 140

Conread position: 30-319
Cow position: chrX:21986153-21986436 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 198
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 143, 96

Conread position: 30-319
Cow position: chrX:22074938-22074656 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 209
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 67, 94

Conread position: 30-319
Cow position: chrX:27508888-27509164 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 200
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 28, 0

Conread position: 30-319
Cow position: chrX:27771830-27772105 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 202
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 77, 62

Conread position: 30-319
Cow position: chrX:29680123-29680404 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 0

Conread position: 30-319
Cow position: chrX:31252545-31252274 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 30-319
Cow position: chrX:31442691-31442966 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 0

Conread position: 30-319
Cow position: chrX:32821166-32820884 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 0

Conread position: 30-319
Cow position: chrX:33640113-33639827 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 120

Conread position: 30-319
Cow position: chrX:33855082-33855377 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 194
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 123, 52

Conread position: 30-319
Cow position: chrX:34314162-34313889 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 205
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 104, 0

Conread position: 30-319
Cow position: chrX:34402144-34401854 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 131

Conread position: 30-319
Cow position: chrX:34503058-34502778 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 0

Conread position: 30-319
Cow position: chrX:35288793-35288515 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 203
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 43, 94

Conread position: 30-319
Cow position: chrX:35885589-35885874 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 203
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 78, 94

Conread position: 30-319
Cow position: chrX:36356243-36355971 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 214
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 41, 0

Conread position: 30-319
Cow position: chrX:36976089-36975805 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 206
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 106, 0

Conread position: 30-319
Cow position: chrX:39415232-39415514 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 208
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 209, 137

Conread position: 30-319
Cow position: chrX:43527646-43527359 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 211
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 222, 129

Conread position: 30-320
Cow position: chrX:5872455-5872172 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 143

Conread position: 30-320
Cow position: chrX:10831350-10831638 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 42

Conread position: 30-320
Cow position: chrX:12979696-12979972 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 212
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 46, 53

Conread position: 30-320
Cow position: chrX:13647647-13647930 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 198
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 116, 0

Conread position: 30-320
Cow position: chrX:17630663-17630948 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 205
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 62, 135

Conread position: 30-320
Cow position: chrX:27175136-27174850 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 211
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 91, 80

Conread position: 30-320
Cow position: chrX:28878036-28878309 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 214
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 162, 139

Conread position: 30-320
Cow position: chrX:30962738-30963017 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 202
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 22, 126

Conread position: 30-320
Cow position: chrX:33493914-33493633 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 201
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 82, 0

Conread position: 30-320
Cow position: chrX:34792175-34792452 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 203
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 10, 0

Conread position: 30-320
Cow position: chrX:37780971-37781259 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 206
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 138, 148

Conread position: 30-320
Cow position: chrX:40035302-40035585 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 210
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 88, 103

Conread position: 30-320
Cow position: chrX:41123197-41122925 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 0

Conread position: 30-320
Cow position: chrX:41526391-41526666 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 199
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 155, 51

Conread position: 30-320
Cow position: chrX:43779714-43779993 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 213
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 161, 31

Conread position: 30-320
Cow position: chrX:46072679-46072962 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 0

Conread position: 30-321
Cow position: chrX:10959257-10959543 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 90

Conread position: 30-321
Cow position: chrX:18204325-18204608 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 209
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 77, 141

Conread position: 30-321
Cow position: chrX:25713934-25713651 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 197
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 5, 48

Conread position: 30-321
Cow position: chrX:32330308-32330015 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 212
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 43, 95

Conread position: 30-321
Cow position: chrX:46433629-46433340 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 135

Conread position: 30-325
Cow position: chrX:152038-151754 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 30-325
Cow position: chrX:1615910-1616194 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 214
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 143, 23

Conread position: 30-325
Cow position: chrX:4043729-4043997 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 215
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 72, 0

Conread position: 30-325
Cow position: chrX:4399257-4398979 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 218
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 95, 51

Conread position: 30-325
Cow position: chrX:6278360-6278652 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 0

Conread position: 30-325
Cow position: chrX:6407681-6407402 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 211
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 64, 0

Conread position: 30-325
Cow position: chrX:7646394-7646104 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 218
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 28, 137

Conread position: 30-325
Cow position: chrX:8731231-8730933 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 216
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 114, 83

Conread position: 30-325
Cow position: chrX:8869263-8869552 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 142

Conread position: 30-325
Cow position: chrX:9201686-9201400 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 200
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 126, 0

Conread position: 30-325
Cow position: chrX:9252025-9252325 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 210
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 224, 126

Conread position: 30-325
Cow position: chrX:9425615-9425888 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 205
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 60, 0

Conread position: 30-325
Cow position: chrX:11656219-11655942 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 214
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 130, 0

Conread position: 30-325
Cow position: chrX:12309248-12309535 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 211
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 137, 0

Conread position: 30-325
Cow position: chrX:14599670-14599383 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 20

Conread position: 30-325
Cow position: chrX:15546020-15545745 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 210
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 16, 21

Conread position: 30-325
Cow position: chrX:17542097-17541817 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 208
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 13, 44

Conread position: 30-325
Cow position: chrX:20339756-20340038 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 30-325
Cow position: chrX:21593425-21593137 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 223
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 17, 76

Conread position: 30-325
Cow position: chrX:22387112-22387393 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 0

Conread position: 30-325
Cow position: chrX:25207719-25207993 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 207
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 45, 0

Conread position: 30-325
Cow position: chrX:27446824-27446542 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 208
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 235, 136

Conread position: 30-325
Cow position: chrX:29289716-29289430 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 211
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 10, 21

Conread position: 30-325
Cow position: chrX:29544739-29545028 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 215
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 10, 21

Conread position: 30-325
Cow position: chrX:29601690-29601979 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 0

Conread position: 30-325
Cow position: chrX:31250526-31250243 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 203
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 147, 0

Conread position: 30-325
Cow position: chrX:31489658-31489365 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 233, 134

Conread position: 30-325
Cow position: chrX:33001044-33000757 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 95

Conread position: 30-325
Cow position: chrX:34411984-34411694 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 138

Conread position: 30-325
Cow position: chrX:35543025-35542745 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 215
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 90, 0

Conread position: 30-325
Cow position: chrX:38006633-38006914 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 211
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 100, 10

Conread position: 30-325
Cow position: chrX:38071634-38071917 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 199
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 268, 20

Conread position: 30-325
Cow position: chrX:38094382-38094673 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 82

Conread position: 30-325
Cow position: chrX:38549585-38549302 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 135

Conread position: 30-325
Cow position: chrX:41238217-41238512 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 80

Conread position: 30-325
Cow position: chrX:42011419-42011133 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 208
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 140, 119

Conread position: 30-325
Cow position: chrX:42235386-42235679 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 134

Conread position: 30-325
Cow position: chrX:42247044-42247330 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 0

Conread position: 30-325
Cow position: chrX:44192306-44192599 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 207
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 63, 150

Conread position: 30-325
Cow position: chrX:44656819-44657111 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 202
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 77, 92

Conread position: 30-325
Cow position: chrX:45502284-45502002 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 204
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 111, 139

Conread position: 30-325
Cow position: chrX:45598467-45598750 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 207
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 127, 106

Conread position: 30-325
Cow position: chrX:46532357-46532656 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 158

Conread position: 30-325
Cow position: chrX:46587960-46587671 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 0

Conread position: 31-193
Cow position: chrX:47079764-47079600 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 116
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 144, 0

Conread position: 31-204
Cow position: chrX:10305214-10305380 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 131
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 84, 0

Conread position: 31-206
Cow position: chrX:27413648-27413476 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 123
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 120, 0

Conread position: 31-251
Cow position: chrX:22115180-22115396 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 153
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 205, 127

Conread position: 31-261
Cow position: chrX:34222851-34222625 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 165
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 44, 0

Conread position: 31-263
Cow position: chrX:13853758-13853530 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 168
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 137, 79

Conread position: 31-280
Cow position: chrX:34377079-34376842 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 166
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 125, 0

Conread position: 31-289
Cow position: chrX:42927687-42927933 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 177
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 134, 0

Conread position: 31-293
Cow position: chrX:5679794-5680053 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 182
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 76, 136

Conread position: 31-293
Cow position: chrX:34315658-34315407 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 196
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 70, 155

Conread position: 31-311
Cow position: chrX:45968285-45968026 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 197
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 138, 0

Conread position: 31-319
Cow position: chrX:7336978-7336684 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 188
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 76, 175

Conread position: 31-319
Cow position: chrX:11084928-11085201 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 0

Conread position: 31-319
Cow position: chrX:17795118-17794841 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 192
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 153, 0

Conread position: 31-319
Cow position: chrX:34441317-34441596 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 104

Conread position: 31-319
Cow position: chrX:34543921-34543642 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 102

Conread position: 31-320
Cow position: chrX:37910581-37910306 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 9

Conread position: 31-320
Cow position: chrX:44961888-44961606 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 0

Conread position: 31-322
Cow position: chrX:45099265-45098974 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 199
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 257, 153

Conread position: 31-325
Cow position: chrX:8797386-8797101 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 256, 79

Conread position: 31-325
Cow position: chrX:10411847-10412135 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 138

Conread position: 31-325
Cow position: chrX:20584465-20584172 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 207
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 140, 159

Conread position: 31-325
Cow position: chrX:31312166-31311879 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 0

Conread position: 32-228
Cow position: chrX:32977950-32978133 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 148
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 12, 0

Conread position: 32-308
Cow position: chrX:7695884-7695615 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 206
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 70, 12

Conread position: 32-311
Cow position: chrX:38226974-38227231 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 204
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 32, 0

Conread position: 32-312
Cow position: chrX:41878798-41879069 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 206
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 189, 77

Conread position: 32-314
Cow position: chrX:41068861-41068587 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 153

Conread position: 32-316
Cow position: chrX:45174986-45174708 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 182
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 132, 0

Conread position: 32-320
Cow position: chrX:618873-619149 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 202
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 136, 40

Conread position: 32-325
Cow position: chrX:917232-917518 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 268, 111

Conread position: 32-325
Cow position: chrX:7351433-7351149 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 211
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 67, 0

Conread position: 32-325
Cow position: chrX:14275607-14275883 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 197
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 155, 0

Conread position: 32-325
Cow position: chrX:48236953-48236666 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 210
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 97, 49

Conread position: 33-299
Cow position: chrX:27945919-27946183 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 187
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 74, 91

Conread position: 33-314
Cow position: chrX:616124-616401 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 109

Conread position: 33-316
Cow position: chrX:48646472-48646741 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 186
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 75, 18

Conread position: 33-319
Cow position: chrX:15007015-15007294 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 33-320
Cow position: chrX:39126461-39126186 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 205
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 269, 134

Conread position: 33-325
Cow position: chrX:22624611-22624334 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 203
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 144, 0

Conread position: 33-325
Cow position: chrX:38218851-38218561 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 182

Conread position: 33-325
Cow position: chrX:42171162-42171446 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 0

Conread position: 34-189
Cow position: chrX:16830354-16830203 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 115
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 141, 85

Conread position: 34-205
Cow position: chrX:24170596-24170765 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 121
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 41, 0

Conread position: 34-217
Cow position: chrX:4037040-4037221 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 137
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 66, 12

Conread position: 34-222
Cow position: chrX:43426429-43426242 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 131
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 150, 0

Conread position: 34-286
Cow position: chrX:43568053-43567811 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 184
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 133, 0

Conread position: 34-303
Cow position: chrX:6041075-6041342 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 176
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 149, 120

Conread position: 34-306
Cow position: chrX:19273573-19273854 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 198
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 139, 241

Conread position: 34-310
Cow position: chrX:19879172-19878915 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 190
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 141, 48

Conread position: 34-311
Cow position: chrX:20151990-20151710 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 76

Conread position: 34-311
Cow position: chrX:44054936-44054665 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 198
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 231, 129

Conread position: 34-315
Cow position: chrX:36778532-36778271 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 191
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 29, 0

Conread position: 34-318
Cow position: chrX:7710405-7710685 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 209
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 46, 51

Conread position: 34-319
Cow position: chrX:3580078-3579800 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 208
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 8, 17

Conread position: 34-319
Cow position: chrX:11844107-11844391 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 202
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 85, 104

Conread position: 34-319
Cow position: chrX:23513887-23514159 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 34-320
Cow position: chrX:37836712-37836446 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 205
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 62, 0

Conread position: 34-320
Cow position: chrX:47046380-47046660 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 202
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 98, 67

Conread position: 34-325
Cow position: chrX:630176-630457 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 198
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 284, 43

Conread position: 34-325
Cow position: chrX:6563653-6563365 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 202
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 49, 59

Conread position: 34-325
Cow position: chrX:22822180-22821901 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 207
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 204, 129

Conread position: 34-325
Cow position: chrX:31340844-31340558 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 196
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 207, 43

Conread position: 34-325
Cow position: chrX:32310240-32309959 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 207
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 40, 129

Conread position: 34-325
Cow position: chrX:43730090-43730361 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 0

Conread position: 35-306
Cow position: chrX:1499799-1499534 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 130

Conread position: 35-314
Cow position: chrX:7278044-7277776 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 132

Conread position: 35-320
Cow position: chrX:27302009-27301724 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 194
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 95, 58

Conread position: 35-325
Cow position: chrX:40480734-40481019 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 216
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 28, 15

Conread position: 36-173
Cow position: chrX:25788773-25788909 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 102
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 123, 0

Conread position: 36-236
Cow position: chrX:12082192-12082389 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 138
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 78, 0

Conread position: 36-251
Cow position: chrX:23113417-23113199 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 167
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 129, 154

Conread position: 36-263
Cow position: chrX:161543-161322 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 172
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 11, 0

Conread position: 36-263
Cow position: chrX:38560691-38560466 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 153
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 205, 148

Conread position: 36-308
Cow position: chrX:7162188-7161927 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 200
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 140, 63

Conread position: 36-308
Cow position: chrX:36068147-36067884 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 195
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 135, 0

Conread position: 36-308
Cow position: chrX:38853329-38853065 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 189
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 67, 0

Conread position: 36-310
Cow position: chrX:31729574-31729308 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 193
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 132, 0

Conread position: 36-314
Cow position: chrX:4768864-4768606 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 201
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 162, 74

Conread position: 36-315
Cow position: chrX:16762906-16762626 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 201
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 36, 135

Conread position: 36-316
Cow position: chrX:23561990-23561735 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 206
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 59, 131

Conread position: 36-319
Cow position: chrX:5118366-5118646 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 206
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 91, 139

Conread position: 36-319
Cow position: chrX:6544386-6544112 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 192
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 83, 0

Conread position: 36-319
Cow position: chrX:20801901-20801634 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 191
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 141, 0

Conread position: 36-319
Cow position: chrX:23092003-23091737 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 214
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 57, 134

Conread position: 36-319
Cow position: chrX:37232539-37232269 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 200
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 120, 0

Conread position: 36-320
Cow position: chrX:27431786-27432059 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 203
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 138, 0

Conread position: 36-320
Cow position: chrX:40557547-40557826 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 195
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 143, 0

Conread position: 36-325
Cow position: chrX:34754044-34754338 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 204
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 71, 98

Conread position: 36-325
Cow position: chrX:40269624-40269338 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 199
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 63, 129

Conread position: 36-325
Cow position: chrX:47481928-47481653 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 209
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 74, 0

Conread position: 37-262
Cow position: chrX:6265468-6265689 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 159
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 86, 0

Conread position: 37-262
Cow position: chrX:40283252-40283036 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 159
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 73, 0

Conread position: 37-288
Cow position: chrX:35413741-35413507 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 185
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 180, 73

Conread position: 37-306
Cow position: chrX:28013312-28013577 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 180
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 94, 13

Conread position: 37-306
Cow position: chrX:42469810-42470072 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 190
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 71, 143

Conread position: 37-308
Cow position: chrX:44397140-44396886 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 206
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 44, 0

Conread position: 37-319
Cow position: chrX:10393979-10394242 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 194
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 13, 0

Conread position: 37-324
Cow position: chrX:38066324-38066600 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 202
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 285, 147

Conread position: 37-325
Cow position: chrX:4278988-4279261 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 204
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 153, 13

Conread position: 37-325
Cow position: chrX:21672690-21672405 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 13

Conread position: 37-325
Cow position: chrX:26493136-26492856 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 201
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 115, 13

Conread position: 37-325
Cow position: chrX:35273495-35273206 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 196
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 46, 158

Conread position: 37-325
Cow position: chrX:45846232-45845949 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 190
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 100, 0

Conread position: 38-311
Cow position: chrX:4268934-4269203 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 193
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 69, 130

Conread position: 38-311
Cow position: chrX:45977057-45976784 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 182
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 9, 221

Conread position: 38-315
Cow position: chrX:5638028-5638302 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 216
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 46, 137

Conread position: 38-319
Cow position: chrX:11675197-11674921 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 187
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 12, 63

Conread position: 38-325
Cow position: chrX:19690345-19690071 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 205
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 122, 107

Conread position: 39-325
Cow position: chrX:22813189-22812914 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 199
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 203, 7

Conread position: 40-162
Cow position: chrX:37665819-37665697 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 95
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 40-232
Cow position: chrX:13359301-13359480 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 146
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 188, 96

Conread position: 40-292
Cow position: chrX:26881437-26881685 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 178
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 144, 0

Conread position: 40-308
Cow position: chrX:34532648-34532389 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 185
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 143, 118

Conread position: 40-308
Cow position: chrX:35224424-35224163 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 181
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 119, 0

Conread position: 40-311
Cow position: chrX:11454921-11455194 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 201
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 130, 41

Conread position: 40-316
Cow position: chrX:41884284-41884555 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 197
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 127, 0

Conread position: 40-319
Cow position: chrX:11938805-11939071 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 189
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 68, 139

Conread position: 40-319
Cow position: chrX:18694803-18695064 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 211
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 69, 0

Conread position: 40-319
Cow position: chrX:47186199-47186465 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 193
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 206, 14

Conread position: 40-320
Cow position: chrX:28134466-28134205 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 209
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 185, 41

Conread position: 40-325
Cow position: chrX:7722116-7721838 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 70

Conread position: 40-325
Cow position: chrX:24287805-24288079 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 207
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 251, 96

Conread position: 41-260
Cow position: chrX:20881818-20882025 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 165
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 40, 0

Conread position: 41-264
Cow position: chrX:19162214-19162431 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 155
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 139, 95

Conread position: 41-294
Cow position: chrX:27516646-27516409 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 179
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 34, 0

Conread position: 41-308
Cow position: chrX:7572033-7571771 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 194
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 15, 128

Conread position: 42-306
Cow position: chrX:8925824-8925570 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 196
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 8, 0

Conread position: 42-311
Cow position: chrX:47165761-47166023 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 184
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 262, 9

Conread position: 42-314
Cow position: chrX:21064409-21064144 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 185
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 66, 82

Conread position: 42-325
Cow position: chrX:47484139-47484418 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 201
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 66, 9

Conread position: 43-244
Cow position: chrX:19965271-19965474 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 139
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 65, 81

Conread position: 43-303
Cow position: chrX:1055256-1055521 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 188
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 128, 205

Conread position: 43-307
Cow position: chrX:48262730-48262474 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 174
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 65, 8

Conread position: 43-311
Cow position: chrX:36393217-36393483 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 185
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 65, 49

Conread position: 43-314
Cow position: chrX:32170764-32171027 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 189
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 111, 69

Conread position: 43-315
Cow position: chrX:40809818-40809546 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 181
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 65, 81

Conread position: 43-316
Cow position: chrX:22453973-22454233 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 193
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 80, 0

Conread position: 43-319
Cow position: chrX:10302466-10302194 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 180
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 63, 34

Conread position: 43-319
Cow position: chrX:28111634-28111362 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 189
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 198, 38

Conread position: 43-320
Cow position: chrX:34454782-34454519 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 194
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 65, 81

Conread position: 43-325
Cow position: chrX:23563666-23563943 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 101

Conread position: 43-325
Cow position: chrX:47873212-47873488 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 193
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 65, 8

Conread position: 44-310
Cow position: chrX:40692627-40692887 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 182
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 258, 119

Conread position: 44-316
Cow position: chrX:488627-488350 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 188
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 64, 7

Conread position: 44-320
Cow position: chrX:30133195-30133470 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 203
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 240, 6

Conread position: 45-319
Cow position: chrX:20791692-20791962 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 178
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 22, 35

Conread position: 47-261
Cow position: chrX:48071282-48071072 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 147
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 61, 77

Conread position: 47-319
Cow position: chrX:22921441-22921172 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 190
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 61, 19

Conread position: 48-320
Cow position: chrX:45993347-45993078 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 210
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 44, 9

Conread position: 48-325
Cow position: chrX:16541537-16541824 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 190
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 127, 80

Conread position: 50-316
Cow position: chrX:21566525-21566261 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 134

Conread position: 50-319
Cow position: chrX:11856548-11856284 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 193
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 117, 0

Conread position: 51-262
Cow position: chrX:44837093-44836895 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 152
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 51, 71

Conread position: 51-275
Cow position: chrX:44090895-44090672 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 153
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 57, 78

Conread position: 51-303
Cow position: chrX:45005741-45005502 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 176
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 57, 73

Conread position: 51-314
Cow position: chrX:45089563-45089307 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 175
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 57, 78

Conread position: 51-314
Cow position: chrX:48570871-48571131 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 176
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 135, 126

Conread position: 51-319
Cow position: chrX:48194918-48195185 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 192
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 57, 78

Conread position: 51-319
Cow position: chrX:48652604-48652867 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 189
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 51, 71

Conread position: 51-321
Cow position: chrX:31260497-31260772 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 199
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 53, 122

Conread position: 51-325
Cow position: chrX:26625554-26625823 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 173

Conread position: 51-325
Cow position: chrX:43049448-43049198 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 196
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 29, 53

Conread position: 51-325
Cow position: chrX:44834679-44834962 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 189
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 66, 128

Conread position: 51-325
Cow position: chrX:45403708-45403980 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 193
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 94, 111

Conread position: 51-325
Cow position: chrX:46722617-46722887 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 192
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 57, 73

Conread position: 51-325
Cow position: chrX:47300786-47301050 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 195
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 51, 76

Conread position: 51-325
Cow position: chrX:47302760-47303026 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 190
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 51, 78

Conread position: 53-310
Cow position: chrX:29032525-29032277 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 179
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 105, 24

Conread position: 53-319
Cow position: chrX:38936815-38936556 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 192
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 73, 66

Conread position: 53-321
Cow position: chrX:4865348-4865100 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 186
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 142, 69

Conread position: 54-228
Cow position: chrX:32623685-32623511 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 126
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 54-311
Cow position: chrX:15815197-15814951 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 189
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 54, 19

Conread position: 54-319
Cow position: chrX:12249929-12249659 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 201
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 26, 11

Conread position: 55-277
Cow position: chrX:47967720-47967496 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 156
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 53, 74

Conread position: 55-319
Cow position: chrX:7509252-7508998 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 182
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 55-325
Cow position: chrX:21004797-21004535 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 197
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 109, 0

Conread position: 55-325
Cow position: chrX:23254091-23254360 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 176
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 12, 32

Conread position: 57-319
Cow position: chrX:7497353-7497099 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 185
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 20, 0

Conread position: 57-319
Cow position: chrX:24259468-24259726 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 172
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 42, 116

Conread position: 59-319
Cow position: chrX:13913184-13912936 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 186
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 84, 126

Conread position: 59-320
Cow position: chrX:34662737-34662990 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 181
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 48, 65

Conread position: 59-325
Cow position: chrX:48010713-48010448 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 183
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 49, 65

Conread position: 63-297
Cow position: chrX:40320511-40320283 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 163
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 45, 61

Conread position: 63-308
Cow position: chrX:27680503-27680266 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 182
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 101, 0

Conread position: 63-308
Cow position: chrX:31948830-31949066 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 177
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 45, 61

Conread position: 66-264
Cow position: chrX:4296723-4296911 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 143
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 42, 58

Conread position: 66-287
Cow position: chrX:44873459-44873673 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 149
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 66-325
Cow position: chrX:38935381-38935135 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 180
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 56, 0

Conread position: 67-325
Cow position: chrX:47344397-47344148 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 182
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 41, 62

Conread position: 68-311
Cow position: chrX:40826651-40826891 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 174
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 211, 93

Conread position: 68-319
Cow position: chrX:27685349-27685103 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 187
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 21, 99

Conread position: 68-320
Cow position: chrX:36061260-36061010 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 173
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 86, 95

Conread position: 68-325
Cow position: chrX:2467984-2467733 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 192
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 34, 76

Conread position: 69-286
Cow position: chrX:17949394-17949601 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 154
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 39, 55

Conread position: 69-319
Cow position: chrX:842256-842014 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 177
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 39, 55

Conread position: 72-324
Cow position: chrX:30263354-30263103 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 175
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 61, 101

Conread position: 72-325
Cow position: chrX:26440689-26440926 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 183
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 43, 0

Conread position: 73-305
Cow position: chrX:6488671-6488446 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 177
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 147, 25

Conread position: 75-292
Cow position: chrX:27119790-27119582 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 156
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 95, 0

Conread position: 75-319
Cow position: chrX:37843810-37843576 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 171
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 17, 0

Conread position: 77-304
Cow position: chrX:26493542-26493766 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 157
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 93, 85

Conread position: 78-319
Cow position: chrX:29542127-29542363 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 170
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 89, 0

Conread position: 78-325
Cow position: chrX:12405291-12405537 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 184
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 193, 93

Conread position: 80-320
Cow position: chrX:48035513-48035286 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 161
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 93, 0

Conread position: 81-263
Cow position: chrX:1572052-1572228 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 134
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 86, 0

Conread position: 81-321
Cow position: chrX:20710161-20709929 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 172
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 63, 0

Conread position: 83-286
Cow position: chrX:4991928-4992127 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 144
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 71, 79

Conread position: 83-319
Cow position: chrX:29723825-29723597 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 176
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 81, 0

Conread position: 83-319
Cow position: chrX:42507563-42507791 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 174
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 176, 82

Conread position: 87-300
Cow position: chrX:19003374-19003175 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 160
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 25, 0

Conread position: 90-319
Cow position: chrX:24105702-24105482 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 158
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 78, 0

Conread position: 92-325
Cow position: chrX:11589512-11589738 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 0

Conread position: 92-325
Cow position: chrX:35822420-35822192 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 161
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 94, 76

Conread position: 94-320
Cow position: chrX:13785286-13785508 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 158
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 77, 0

Conread position: 95-306
Cow position: chrX:6234376-6234584 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 156
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 34, 83

Conread position: 98-319
Cow position: chrX:26875811-26876027 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 147
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 86, 0

Conread position: 100-319
Cow position: chrX:15139477-15139689 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 159
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 18, 68

Conread position: 102-319
Cow position: chrX:40116486-40116277 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 164
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 26, 21

Conread position: 103-325
Cow position: chrX:19188996-19188790 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 163
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 60, 0

Conread position: 105-325
Cow position: chrX:39938460-39938669 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 161
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 61, 0

Conread position: 106-325
Cow position: chrX:42461681-42461892 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 156
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 11, 71

Conread position: 108-293
Cow position: chrX:28845893-28845714 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 146
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 85, 65

Conread position: 111-298
Cow position: chrX:12018349-12018163 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 140
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 171, 55

Conread position: 111-314
Cow position: chrX:23970436-23970245 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 149
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 73, 0

Conread position: 112-316
Cow position: chrX:9855354-9855163 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 156
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 59, 0

Conread position: 112-316
Cow position: chrX:9954195-9954004 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 156
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 59, 0

Conread position: 112-319
Cow position: chrX:41166906-41167109 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 164
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 65, 0

Conread position: 112-325
Cow position: chrX:7053676-7053882 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 147
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 56, 0

Conread position: 113-314
Cow position: chrX:48243411-48243600 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 142
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 61, 0

Conread position: 115-309
Cow position: chrX:27449944-27450133 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 140
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 126, 62

Conread position: 115-320
Cow position: chrX:28105971-28105779 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 150
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 21, 26

Conread position: 115-321
Cow position: chrX:25232646-25232448 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 149
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 126, 61

Conread position: 116-319
Cow position: chrX:42875035-42874837 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 159
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 56, 0

Conread position: 119-264
Cow position: chrX:42789669-42789529 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 108
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 52, 0

Conread position: 119-319
Cow position: chrX:32127942-32128128 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 148
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 7, 51

Conread position: 122-300
Cow position: chrX:17498131-17497961 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 141
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 14, 19

Conread position: 123-325
Cow position: chrX:8900072-8899878 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 146
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 48, 0

Conread position: 126-263
Cow position: chrX:35848606-35848471 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 111
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 54, 25

Conread position: 126-308
Cow position: chrX:41992004-41992178 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 139
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 133, 46

Conread position: 126-310
Cow position: chrX:20752297-20752120 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 142
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 17, 42

Conread position: 126-319
Cow position: chrX:18999930-18999744 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 139
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 45, 0

Conread position: 126-319
Cow position: chrX:23497626-23497809 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 152
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 12, 0

Conread position: 126-319
Cow position: chrX:40648028-40647833 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 154
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 137, 42

Conread position: 126-320
Cow position: chrX:14900688-14900867 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 145
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 48, 0

Conread position: 126-325
Cow position: chrX:28835860-28836048 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 148
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 45, 52

Conread position: 126-325
Cow position: chrX:42994655-42994466 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 161
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 45, 0

Conread position: 126-325
Cow position: chrX:47191365-47191555 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 144
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 192, 97

Conread position: 127-320
Cow position: chrX:34991077-34990890 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 137
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 62, 0

Conread position: 127-320
Cow position: chrX:35681383-35681195 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 149
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 39, 0

Conread position: 127-320
Cow position: chrX:40567639-40567458 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 147
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 132, 44

Conread position: 127-321
Cow position: chrX:32215239-32215050 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 142
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 190, 40

Conread position: 127-325
Cow position: chrX:36961682-36961489 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 166
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 40

Conread position: 128-314
Cow position: chrX:29563329-29563510 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 141
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 34, 101

Conread position: 128-314
Cow position: chrX:36723049-36723230 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 136
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 49, 0

Conread position: 128-319
Cow position: chrX:25238219-25238032 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 147
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 49, 72

Conread position: 131-264
Cow position: chrX:25282978-25283106 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 110
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 40, 0

Conread position: 131-317
Cow position: chrX:44053298-44053116 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 136
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 8, 41

Conread position: 136-306
Cow position: chrX:45015608-45015447 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 125
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 137-308
Cow position: chrX:35969055-35969218 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 133
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 79, 31

Conread position: 137-325
Cow position: chrX:18456437-18456246 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 136
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 37, 49

Conread position: 137-325
Cow position: chrX:30832821-30832992 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 145
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 27, 0

Conread position: 137-325
Cow position: chrX:37048550-37048726 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 139
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 24, 0

Conread position: 139-325
Cow position: chrX:41199135-41198954 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 143
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 124, 31

Conread position: 140-311
Cow position: chrX:27269995-27269834 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 127
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 26, 0

Conread position: 140-311
Cow position: chrX:34270430-34270265 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 130
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 36, 0

Conread position: 140-314
Cow position: chrX:17908260-17908420 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 136
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 36, 0

Conread position: 140-314
Cow position: chrX:44754631-44754794 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 136
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 35, 0

Conread position: 140-319
Cow position: chrX:26286009-26285835 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 29, 0

Conread position: 140-320
Cow position: chrX:9997306-9997480 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 136
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 30, 0

Conread position: 140-325
Cow position: chrX:14003618-14003791 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 137
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 28, 0

Conread position: 140-325
Cow position: chrX:28157528-28157348 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 138
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 131, 28

Conread position: 141-319
Cow position: chrX:41743941-41743768 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 144
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 36, 0

Conread position: 141-325
Cow position: chrX:38439508-38439328 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 149
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 45, 0

Conread position: 142-320
Cow position: chrX:10278837-10278669 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 126, 35

Conread position: 143-298
Cow position: chrX:9155286-9155131 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 112
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 67, 28

Conread position: 144-324
Cow position: chrX:12116071-12115890 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 139
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 121, 19

Conread position: 144-325
Cow position: chrX:9770652-9770831 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 132
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 154, 27

Conread position: 145-319
Cow position: chrX:14925024-14924855 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 134
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 32, 0

Conread position: 146-319
Cow position: chrX:29509417-29509588 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 129
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 15, 0

Conread position: 148-288
Cow position: chrX:32747703-32747570 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 152-311
Cow position: chrX:31986839-31987003 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 14, 133

Conread position: 152-325
Cow position: chrX:7718872-7718708 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 135
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 18, 0

Conread position: 155-314
Cow position: chrX:35284638-35284480 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 123
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 20, 103

Conread position: 158-320
Cow position: chrX:36283366-36283204 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 122
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 23, 16

Conread position: 159-319
Cow position: chrX:35409670-35409515 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 45, 9

Conread position: 163-319
Cow position: chrX:10437662-10437809 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 126
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 93, 14

Conread position: 164-325
Cow position: chrX:35609997-35609840 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 126
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 104, 0

Conread position: 170-325
Cow position: chrX:41403980-41403826 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 6, 0

Conread position: 170-325
Cow position: chrX:41410528-41410374 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 6, 0

Conread position: 173-319
Cow position: chrX:4091646-4091503 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 16, 0

Conread position: 174-319
Cow position: chrX:21665597-21665738 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 10, 0

Conread position: 174-325
Cow position: chrX:46315380-46315527 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 15, 0

Conread position: 177-325
Cow position: chrX:19019111-19019257 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 118
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 18, 7

Conread position: 179-325
Cow position: chrX:40183352-40183496 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 9, 0

Conread position: 182-325
Cow position: chrX:35387912-35388052 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 109
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 82, 0

Conread position: 183-325
Cow position: chrX:40452220-40452359 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 81, 0

Conread position: 184-319
Cow position: chrX:4750316-4750448 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 102
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 80, 0

Conread position: 188-310
Cow position: chrX:15485640-15485762 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 94
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 188-316
Cow position: chrX:30922170-30922042 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 188-319
Cow position: chrX:32020135-32020266 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 102
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 192-319
Cow position: chrX:25411821-25411696 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 103
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 64, 0

Conread position: 192-319
Cow position: chrX:38967628-38967506 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 64, 0

Conread position: 200-325
Cow position: chrX:23785635-23785507 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 103
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 14, 0

Conread position: 224-325
Cow position: chrX:42855363-42855262 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 86
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.