Non-Coding RNA Search

Cow genome map


           Conread name:
           rnbm25b_g22.y1
        

               Conread position:
               1-161
               

               Cow position:
               chr11:13040245-13040090 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               95, 31
               

               Conread position:
               1-181
               

               Cow position:
               chr11:44636836-44636653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               22, 172
               

               Conread position:
               1-181
               

               Cow position:
               chr11:76114573-76114744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               94, 28
               

               Conread position:
               1-185
               

               Cow position:
               chr11:35213248-35213062 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               1-191
               

               Cow position:
               chr11:42066780-42066976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               148
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               36, 67
               

               Conread position:
               1-193
               

               Cow position:
               chr11:25386986-25387181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               34, 175
               

               Conread position:
               1-205
               

               Cow position:
               chr11:69015893-69016101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               2-136
               

               Cow position:
               chr11:7299055-7299191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               30, 18
               

               Conread position:
               2-136
               

               Cow position:
               chr11:18588663-18588529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               104
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               93, 18
               

               Conread position:
               2-136
               

               Cow position:
               chr11:83357317-83357451 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               104
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               11, 19
               

               Conread position:
               2-144
               

               Cow position:
               chr11:35709194-35709051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               108
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               38, 18
               

               Conread position:
               2-166
               

               Cow position:
               chr11:53279792-53279628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               119
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               33, 98
               

               Conread position:
               2-175
               

               Cow position:
               chr11:1157569-1157739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               2-175
               

               Cow position:
               chr11:71501209-71501037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               49, 24
               

               Conread position:
               2-177
               

               Cow position:
               chr11:13864179-13864006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               97, 17
               

               Conread position:
               2-178
               

               Cow position:
               chr11:4663123-4662949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               91, 35
               

               Conread position:
               2-178
               

               Cow position:
               chr11:16540784-16540961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               29, 47
               

               Conread position:
               2-178
               

               Cow position:
               chr11:80761456-80761279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               129
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               2-179
               

               Cow position:
               chr11:1067520-1067340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               30, 17
               

               Conread position:
               2-179
               

               Cow position:
               chr11:36977728-36977905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               123
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               33, 15
               

               Conread position:
               2-179
               

               Cow position:
               chr11:42016710-42016540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               2-180
               

               Cow position:
               chr11:30209900-30209722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               39, 18
               

               Conread position:
               2-180
               

               Cow position:
               chr11:34032279-34032098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               141
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               93, 39
               

               Conread position:
               2-180
               

               Cow position:
               chr11:77745333-77745150 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               2-181
               

               Cow position:
               chr11:70278185-70278011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               97, 40
               

               Conread position:
               2-181
               

               Cow position:
               chr11:77128575-77128762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               2-185
               

               Cow position:
               chr11:32254295-32254108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               93, 154
               

               Conread position:
               2-185
               

               Cow position:
               chr11:83033314-83033134 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               2-187
               

               Cow position:
               chr11:47724825-47725004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               36, 65
               

               Conread position:
               2-187
               

               Cow position:
               chr11:66041195-66041386 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               32, 18
               

               Conread position:
               2-189
               

               Cow position:
               chr11:43898062-43898248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               88, 23
               

               Conread position:
               2-195
               

               Cow position:
               chr11:1380597-1380791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               37, 23
               

               Conread position:
               2-195
               

               Cow position:
               chr11:13940115-13940302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               97, 37
               

               Conread position:
               2-195
               

               Cow position:
               chr11:37804633-37804438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               2-198
               

               Cow position:
               chr11:71492932-71492743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               2-200
               

               Cow position:
               chr11:66424958-66424759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               135
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               36, 142
               

               Conread position:
               2-203
               

               Cow position:
               chr11:79019137-79018935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               159
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               28, 6
               

               Conread position:
               2-275
               

               Cow position:
               chr11:6633628-6633900 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               206
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               27, 44
               

               Conread position:
               2-289
               

               Cow position:
               chr11:80787986-80787699 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               199
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               21, 17
               

               Conread position:
               2-290
               

               Cow position:
               chr11:17831298-17831017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               209
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               93, 39
               

               Conread position:
               2-304
               

               Cow position:
               chr11:8437767-8437484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               211
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               29, 44
               

               Conread position:
               2-304
               

               Cow position:
               chr11:62778369-62778676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 25
               

               Conread position:
               2-310
               

               Cow position:
               chr11:76889972-76890251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               215
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               97, 7
               

               Conread position:
               2-311
               

               Cow position:
               chr11:36848850-36849150 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               97, 18
               

               Conread position:
               3-197
               

               Cow position:
               chr11:59463714-59463525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               96, 71
               

               Conread position:
               3-298
               

               Cow position:
               chr11:62225906-62226208 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               203
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               16, 84
               

               Conread position:
               4-136
               

               Cow position:
               chr11:18341116-18340984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               104
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               91, 75
               

               Conread position:
               4-147
               

               Cow position:
               chr11:11045109-11044965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               105
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               4-154
               

               Cow position:
               chr11:2509388-2509231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               4-164
               

               Cow position:
               chr11:60143380-60143217 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               130
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               32, 21
               

               Conread position:
               4-165
               

               Cow position:
               chr11:67600707-67600870 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               4-166
               

               Cow position:
               chr11:45898128-45897962 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               123
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               82, 16
               

               Conread position:
               4-168
               

               Cow position:
               chr11:64638604-64638437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               4-169
               

               Cow position:
               chr11:49934812-49934641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               4-171
               

               Cow position:
               chr11:33526977-33527144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               136
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               47, 28
               

               Conread position:
               4-172
               

               Cow position:
               chr11:67246717-67246878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               4-173
               

               Cow position:
               chr11:53778540-53778710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               4-174
               

               Cow position:
               chr11:2344179-2344347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               95, 16
               

               Conread position:
               4-174
               

               Cow position:
               chr11:21852380-21852207 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               121
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               4-174
               

               Cow position:
               chr11:70978806-70978641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               91, 28
               

               Conread position:
               4-174
               

               Cow position:
               chr11:76606600-76606767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               18, 29
               

               Conread position:
               4-174
               

               Cow position:
               chr11:84890796-84890623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               135
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               29, 125
               

               Conread position:
               4-175
               

               Cow position:
               chr11:12111529-12111363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               4-175
               

               Cow position:
               chr11:18785947-18785782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               138
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               34, 21
               

               Conread position:
               4-175
               

               Cow position:
               chr11:29659487-29659655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               95, 15
               

               Conread position:
               4-177
               

               Cow position:
               chr11:9221803-9221634 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               33, 68
               

               Conread position:
               4-177
               

               Cow position:
               chr11:18572726-18572898 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               94, 37
               

               Conread position:
               4-177
               

               Cow position:
               chr11:19247275-19247102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               4-177
               

               Cow position:
               chr11:23586560-23586736 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               4-177
               

               Cow position:
               chr11:34113188-34113363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               32, 45
               

               Conread position:
               4-177
               

               Cow position:
               chr11:41986119-41985948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               133
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               95, 24
               

               Conread position:
               4-177
               

               Cow position:
               chr11:87155444-87155617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               95, 87
               

               Conread position:
               4-178
               

               Cow position:
               chr11:2084066-2084242 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               4-178
               

               Cow position:
               chr11:19586379-19586558 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               4-178
               

               Cow position:
               chr11:20602147-20602325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               32, 129
               

               Conread position:
               4-178
               

               Cow position:
               chr11:70086253-70086431 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               30, 126
               

               Conread position:
               4-179
               

               Cow position:
               chr11:19592066-19591895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               95, 35
               

               Conread position:
               4-179
               

               Cow position:
               chr11:33345368-33345545 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               133
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               4-179
               

               Cow position:
               chr11:42359037-42359219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               4-179
               

               Cow position:
               chr11:48659856-48660034 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               4-179
               

               Cow position:
               chr11:66518414-66518584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               31, 133
               

               Conread position:
               4-179
               

               Cow position:
               chr11:83397830-83398005 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               124
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               95, 37
               

               Conread position:
               4-180
               

               Cow position:
               chr11:13043221-13043045 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               95, 34
               

               Conread position:
               4-180
               

               Cow position:
               chr11:17278741-17278575 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               4-180
               

               Cow position:
               chr11:30808677-30808493 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               22, 16
               

               Conread position:
               4-180
               

               Cow position:
               chr11:43360858-43360684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               29, 75
               

               Conread position:
               4-180
               

               Cow position:
               chr11:70600894-70600728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               18, 37
               

               Conread position:
               4-180
               

               Cow position:
               chr11:71807646-71807466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               139
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               19, 63
               

               Conread position:
               4-181
               

               Cow position:
               chr11:9270801-9270625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               47, 21
               

               Conread position:
               4-181
               

               Cow position:
               chr11:11125587-11125764 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               91, 162
               

               Conread position:
               4-181
               

               Cow position:
               chr11:18698802-18698982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               46, 28
               

               Conread position:
               4-181
               

               Cow position:
               chr11:30210831-30211008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               133
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               17, 64
               

               Conread position:
               4-181
               

               Cow position:
               chr11:30954924-30955102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               4-181
               

               Cow position:
               chr11:45282852-45283030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               36, 10
               

               Conread position:
               4-181
               

               Cow position:
               chr11:45631837-45631664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               32, 71
               

               Conread position:
               4-181
               

               Cow position:
               chr11:48474628-48474805 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               91, 34
               

               Conread position:
               4-181
               

               Cow position:
               chr11:49152876-49153050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               91, 16
               

               Conread position:
               4-181
               

               Cow position:
               chr11:53147614-53147430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               17, 94
               

               Conread position:
               4-181
               

               Cow position:
               chr11:55761795-55761967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               94, 24
               

               Conread position:
               4-181
               

               Cow position:
               chr11:63482501-63482329 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               161, 37
               

               Conread position:
               4-181
               

               Cow position:
               chr11:63917548-63917375 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               86, 28
               

               Conread position:
               4-181
               

               Cow position:
               chr11:70756406-70756580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               143
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               38, 6
               

               Conread position:
               4-181
               

               Cow position:
               chr11:70825875-70826050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               95, 28
               

               Conread position:
               4-182
               

               Cow position:
               chr11:8147974-8147795 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               87, 37
               

               Conread position:
               4-183
               

               Cow position:
               chr11:27565260-27565434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               4-183
               

               Cow position:
               chr11:35536512-35536690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               91, 20
               

               Conread position:
               4-183
               

               Cow position:
               chr11:36658896-36658720 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               142
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               17, 90
               

               Conread position:
               4-183
               

               Cow position:
               chr11:38874478-38874302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               91, 141
               

               Conread position:
               4-183
               

               Cow position:
               chr11:47004269-47004449 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               27, 149
               

               Conread position:
               4-183
               

               Cow position:
               chr11:62155552-62155742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               4-185
               

               Cow position:
               chr11:38334449-38334630 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               95, 21
               

               Conread position:
               4-187
               

               Cow position:
               chr11:19946359-19946537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               31, 21
               

               Conread position:
               4-187
               

               Cow position:
               chr11:71341541-71341357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               4-189
               

               Cow position:
               chr11:3393287-3393100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               19, 127
               

               Conread position:
               4-189
               

               Cow position:
               chr11:7590118-7590298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               4-189
               

               Cow position:
               chr11:40459036-40459218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               141
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               94, 6
               

               Conread position:
               4-189
               

               Cow position:
               chr11:65607766-65607579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               78, 34
               

               Conread position:
               4-190
               

               Cow position:
               chr11:41313732-41313544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               95, 28
               

               Conread position:
               4-191
               

               Cow position:
               chr11:52690597-52690410 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               34, 100
               

               Conread position:
               4-191
               

               Cow position:
               chr11:72870825-72871017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               17, 44
               

               Conread position:
               4-191
               

               Cow position:
               chr11:78381133-78380953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               141
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               4-191
               

               Cow position:
               chr11:84228788-84228607 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               95, 16
               

               Conread position:
               4-192
               

               Cow position:
               chr11:8545088-8544905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               96, 25
               

               Conread position:
               4-192
               

               Cow position:
               chr11:40478925-40478740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               95, 33
               

               Conread position:
               4-192
               

               Cow position:
               chr11:49057327-49057504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               4-192
               

               Cow position:
               chr11:77705680-77705863 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               33, 89
               

               Conread position:
               4-193
               

               Cow position:
               chr11:23232591-23232406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               10, 25
               

               Conread position:
               4-193
               

               Cow position:
               chr11:56288472-56288661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               173, 16
               

               Conread position:
               4-193
               

               Cow position:
               chr11:67747209-67747393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               87, 41
               

               Conread position:
               4-193
               

               Cow position:
               chr11:67804678-67804856 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               91, 12
               

               Conread position:
               4-195
               

               Cow position:
               chr11:25620475-25620274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               4-195
               

               Cow position:
               chr11:36112350-36112534 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               4-195
               

               Cow position:
               chr11:38236176-38236367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               95, 28
               

               Conread position:
               4-195
               

               Cow position:
               chr11:63435442-63435636 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               153
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               4-195
               

               Cow position:
               chr11:71868679-71868487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               4-196
               

               Cow position:
               chr11:4199197-4199387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               91, 33
               

               Conread position:
               4-197
               

               Cow position:
               chr11:55744396-55744585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               87, 16
               

               Conread position:
               4-197
               

               Cow position:
               chr11:58102852-58102645 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               150
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               30, 132
               

               Conread position:
               4-199
               

               Cow position:
               chr11:40573408-40573216 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               4-200
               

               Cow position:
               chr11:32693550-32693364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               4-200
               

               Cow position:
               chr11:46746556-46746759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               144
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               91, 25
               

               Conread position:
               4-201
               

               Cow position:
               chr11:70206246-70206439 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               94, 38
               

               Conread position:
               4-224
               

               Cow position:
               chr11:80413087-80412865 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               74, 6
               

               Conread position:
               4-228
               

               Cow position:
               chr11:8988302-8988080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               91, 42
               

               Conread position:
               4-262
               

               Cow position:
               chr11:82289499-82289749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               18, 98
               

               Conread position:
               4-270
               

               Cow position:
               chr11:34144990-34144750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               4-280
               

               Cow position:
               chr11:377719-377441 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 21
               

               Conread position:
               4-280
               

               Cow position:
               chr11:46998909-46999165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               204
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               67, 28
               

               Conread position:
               4-285
               

               Cow position:
               chr11:4653053-4652763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               4-285
               

               Cow position:
               chr11:6202371-6202640 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               89, 32
               

               Conread position:
               4-285
               

               Cow position:
               chr11:14466564-14466272 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               204
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               4-285
               

               Cow position:
               chr11:22747405-22747124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               209
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               31, 10
               

               Conread position:
               4-285
               

               Cow position:
               chr11:32398561-32398825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               200
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               32, 101
               

               Conread position:
               4-287
               

               Cow position:
               chr11:6245247-6245507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               4-290
               

               Cow position:
               chr11:33310897-33311198 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               220
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               32, 6
               

               Conread position:
               4-290
               

               Cow position:
               chr11:40792783-40792505 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 207
               

               Conread position:
               4-294
               

               Cow position:
               chr11:23138134-23137833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               216
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               18, 10
               

               Conread position:
               4-297
               

               Cow position:
               chr11:53510577-53510299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               30, 96
               

               Conread position:
               4-299
               

               Cow position:
               chr11:61525993-61526275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               164, 15
               

               Conread position:
               4-302
               

               Cow position:
               chr11:3282958-3283243 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               216
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               286, 28
               

               Conread position:
               4-302
               

               Cow position:
               chr11:7013819-7013526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               211
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               38, 73
               

               Conread position:
               4-302
               

               Cow position:
               chr11:13592661-13592940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               95, 15
               

               Conread position:
               4-303
               

               Cow position:
               chr11:53816783-53817057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               210
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               95, 8
               

               Conread position:
               4-308
               

               Cow position:
               chr11:21507928-21508218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               214
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               95, 15
               

               Conread position:
               4-310
               

               Cow position:
               chr11:63847773-63848067 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               204
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               91, 21
               

               Conread position:
               4-312
               

               Cow position:
               chr11:48383454-48383741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               211
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               32, 44
               

               Conread position:
               4-314
               

               Cow position:
               chr11:3739877-3740177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 181
               

               Conread position:
               4-314
               

               Cow position:
               chr11:43430532-43430227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               217
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               28, 96
               

               Conread position:
               4-314
               

               Cow position:
               chr11:58990428-58990728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               277, 28
               

               Conread position:
               5-144
               

               Cow position:
               chr11:5075302-5075163 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               105
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               90, 20
               

               Conread position:
               5-167
               

               Cow position:
               chr11:48306421-48306259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               88, 33
               

               Conread position:
               5-171
               

               Cow position:
               chr11:36986881-36987041 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               94, 23
               

               Conread position:
               5-175
               

               Cow position:
               chr11:64048331-64048499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               121
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               92, 24
               

               Conread position:
               5-179
               

               Cow position:
               chr11:7924665-7924494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               38, 111
               

               Conread position:
               5-180
               

               Cow position:
               chr11:6233954-6233779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               93, 24
               

               Conread position:
               5-184
               

               Cow position:
               chr11:42083397-42083574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               174, 88
               

               Conread position:
               5-188
               

               Cow position:
               chr11:51729213-51729395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               91, 32
               

               Conread position:
               5-191
               

               Cow position:
               chr11:39462547-39462735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               5-194
               

               Cow position:
               chr11:30370033-30370219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               143
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               29, 77
               

               Conread position:
               5-196
               

               Cow position:
               chr11:83925976-83926159 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               5-197
               

               Cow position:
               chr11:33414163-33414354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               132
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               86, 46
               

               Conread position:
               5-297
               

               Cow position:
               chr11:41293892-41293610 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               208
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               90, 33
               

               Conread position:
               5-302
               

               Cow position:
               chr11:48232748-48233040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               207
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               37, 171
               

               Conread position:
               5-305
               

               Cow position:
               chr11:55333837-55334120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               211
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               97, 15
               

               Conread position:
               6-166
               

               Cow position:
               chr11:8428437-8428598 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               34, 40
               

               Conread position:
               6-167
               

               Cow position:
               chr11:49872960-49872800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               26, 93
               

               Conread position:
               6-170
               

               Cow position:
               chr11:35874078-35873912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               6-170
               

               Cow position:
               chr11:69810825-69810994 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               121
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               6-177
               

               Cow position:
               chr11:16342304-16342129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               6-177
               

               Cow position:
               chr11:82107967-82107804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               89, 26
               

               Conread position:
               6-179
               

               Cow position:
               chr11:27746852-27747023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               123
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               89, 18
               

               Conread position:
               6-179
               

               Cow position:
               chr11:48085842-48086020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               126
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               6-179
               

               Cow position:
               chr11:77319339-77319514 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               133
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               17, 34
               

               Conread position:
               6-181
               

               Cow position:
               chr11:17493403-17493584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               30, 157
               

               Conread position:
               6-181
               

               Cow position:
               chr11:48272124-48272302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               133
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               6-181
               

               Cow position:
               chr11:83066421-83066589 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               29, 75
               

               Conread position:
               6-183
               

               Cow position:
               chr11:21844208-21844035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               29, 65
               

               Conread position:
               6-183
               

               Cow position:
               chr11:62789055-62789233 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               20, 176
               

               Conread position:
               6-184
               

               Cow position:
               chr11:23128616-23128435 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               6-187
               

               Cow position:
               chr11:40608670-40608487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               18, 100
               

               Conread position:
               6-188
               

               Cow position:
               chr11:41101-41288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               18, 76
               

               Conread position:
               6-189
               

               Cow position:
               chr11:17036603-17036418 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               37, 177
               

               Conread position:
               6-189
               

               Cow position:
               chr11:30192101-30192289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               23, 33
               

               Conread position:
               6-189
               

               Cow position:
               chr11:30830689-30830504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               137
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               6-189
               

               Cow position:
               chr11:50472244-50472426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               93, 14
               

               Conread position:
               6-189
               

               Cow position:
               chr11:83230470-83230291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               90, 22
               

               Conread position:
               6-190
               

               Cow position:
               chr11:36238710-36238888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               138
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               6-191
               

               Cow position:
               chr11:17676444-17676261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               26, 44
               

               Conread position:
               6-191
               

               Cow position:
               chr11:30493925-30494105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               6-191
               

               Cow position:
               chr11:31410957-31410766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               6-191
               

               Cow position:
               chr11:42160134-42159946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               14, 98
               

               Conread position:
               6-191
               

               Cow position:
               chr11:48295959-48296142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               6-193
               

               Cow position:
               chr11:84385709-84385525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               6-194
               

               Cow position:
               chr11:35803060-35803251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               23, 92
               

               Conread position:
               6-195
               

               Cow position:
               chr11:45435007-45435201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               139
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               75, 26
               

               Conread position:
               6-196
               

               Cow position:
               chr11:44031928-44032128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               150
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               6-208
               

               Cow position:
               chr11:42296691-42296490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               146
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               93, 22
               

               Conread position:
               6-212
               

               Cow position:
               chr11:28168498-28168290 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               23, 41
               

               Conread position:
               6-283
               

               Cow position:
               chr11:44234279-44234557 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 205
               

               Conread position:
               6-295
               

               Cow position:
               chr11:69119218-69119514 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               208
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               31, 176
               

               Conread position:
               6-301
               

               Cow position:
               chr11:26845668-26845370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               213
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               18, 27
               

               Conread position:
               6-302
               

               Cow position:
               chr11:20761773-20762053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               210
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               89, 101
               

               Conread position:
               6-304
               

               Cow position:
               chr11:64351867-64351563 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               213
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               30, 275
               

               Conread position:
               6-315
               

               Cow position:
               chr11:33341220-33340903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               225
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               26, 239
               

               Conread position:
               7-139
               

               Cow position:
               chr11:20194502-20194366 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               7-177
               

               Cow position:
               chr11:7559925-7560097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               24, 13
               

               Conread position:
               7-180
               

               Cow position:
               chr11:59872859-59873028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               128, 23
               

               Conread position:
               7-181
               

               Cow position:
               chr11:34962992-34963171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               141
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               25, 102
               

               Conread position:
               7-313
               

               Cow position:
               chr11:52380946-52380636 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               202
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               35, 17
               

               Conread position:
               8-175
               

               Cow position:
               chr11:49148967-49149145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               14, 25
               

               Conread position:
               8-178
               

               Cow position:
               chr11:17721876-17721703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               8-179
               

               Cow position:
               chr11:30354986-30355158 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               23, 45
               

               Conread position:
               8-179
               

               Cow position:
               chr11:62813024-62812850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               13, 36
               

               Conread position:
               8-180
               

               Cow position:
               chr11:26144168-26143995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               43, 31
               

               Conread position:
               8-180
               

               Cow position:
               chr11:47837246-47837420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               29, 68
               

               Conread position:
               8-180
               

               Cow position:
               chr11:52297292-52297120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               28, 45
               

               Conread position:
               8-187
               

               Cow position:
               chr11:36920651-36920468 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               26, 174
               

               Conread position:
               8-190
               

               Cow position:
               chr11:27248421-27248601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               133
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               8-193
               

               Cow position:
               chr11:39060671-39060489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               138
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               87, 17
               

               Conread position:
               8-196
               

               Cow position:
               chr11:82940693-82940509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               25, 52
               

               Conread position:
               8-202
               

               Cow position:
               chr11:35573560-35573369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               8-304
               

               Cow position:
               chr11:59702413-59702717 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               211
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               28, 283
               

               Conread position:
               9-183
               

               Cow position:
               chr11:67912223-67912048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               34, 22
               

               Conread position:
               9-191
               

               Cow position:
               chr11:62742705-62742534 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               140
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               9-293
               

               Cow position:
               chr11:21894227-21893957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               10-179
               

               Cow position:
               chr11:30934353-30934516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               121
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               10-196
               

               Cow position:
               chr11:14470299-14470482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               25, 48
               

               Conread position:
               11-167
               

               Cow position:
               chr11:63469806-63469963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               116
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               23, 14
               

               Conread position:
               11-175
               

               Cow position:
               chr11:11558099-11558268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               121
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               11-183
               

               Cow position:
               chr11:62150961-62150790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               123
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               18, 88
               

               Conread position:
               11-192
               

               Cow position:
               chr11:44222817-44222997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               20, 93
               

               Conread position:
               11-280
               

               Cow position:
               chr11:10363457-10363169 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               204
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               21, 145
               

               Conread position:
               11-287
               

               Cow position:
               chr11:69307442-69307716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 174
               

               Conread position:
               11-294
               

               Cow position:
               chr11:69075840-69076126 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               18, 69
               

               Conread position:
               11-309
               

               Cow position:
               chr11:11647001-11647305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               18, 50
               

               Conread position:
               12-183
               

               Cow position:
               chr11:15285684-15285511 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               12-197
               

               Cow position:
               chr11:70609719-70609916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               15, 116
               

               Conread position:
               12-309
               

               Cow position:
               chr11:34646520-34646803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               215
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               20, 191
               

               Conread position:
               13-177
               

               Cow position:
               chr11:31885650-31885820 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               53, 28
               

               Conread position:
               13-197
               

               Cow position:
               chr11:76835697-76835507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               13-290
               

               Cow position:
               chr11:29699768-29699498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               187
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               19, 197
               

               Conread position:
               14-179
               

               Cow position:
               chr11:62620309-62620476 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               14-193
               

               Cow position:
               chr11:30639013-30638836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               147
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               85, 30
               

               Conread position:
               14-195
               

               Cow position:
               chr11:35109603-35109423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               81, 27
               

               Conread position:
               16-193
               

               Cow position:
               chr11:13499952-13500130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               19, 51
               

               Conread position:
               19-166
               

               Cow position:
               chr11:38639049-38639198 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               17, 49
               

               Conread position:
               20-166
               

               Cow position:
               chr11:69652841-69652695 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               9, 19
               

               Conread position:
               20-174
               

               Cow position:
               chr11:70483911-70483757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               83, 21
               

               Conread position:
               20-177
               

               Cow position:
               chr11:15369327-15369485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               30, 18
               

               Conread position:
               20-177
               

               Cow position:
               chr11:68173470-68173629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               20-218
               

               Cow position:
               chr11:28644025-28644226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               145
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               21-179
               

               Cow position:
               chr11:29960239-29960395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               21-295
               

               Cow position:
               chr11:61454572-61454307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               111, 21
               

               Conread position:
               21-312
               

               Cow position:
               chr11:81848828-81849120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               189
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               74, 232
               

               Conread position:
               22-181
               

               Cow position:
               chr11:84499007-84498853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               118
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               22-187
               

               Cow position:
               chr11:1071145-1070983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               121
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               73, 10
               

               Conread position:
               22-205
               

               Cow position:
               chr11:41438245-41438061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               127
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               23-175
               

               Cow position:
               chr11:22499423-22499271 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               19, 76
               

               Conread position:
               23-284
               

               Cow position:
               chr11:11523523-11523258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               53, 18
               

               Conread position:
               23-300
               

               Cow position:
               chr11:261326-261060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               205
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               9, 187
               

               Conread position:
               24-181
               

               Cow position:
               chr11:63909718-63909565 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               24-280
               

               Cow position:
               chr11:67312724-67312964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               71, 176
               

               Conread position:
               26-204
               

               Cow position:
               chr11:54334273-54334453 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               17, 6
               

               Conread position:
               26-270
               

               Cow position:
               chr11:5249581-5249347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               170
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               204, 71
               

               Conread position:
               26-285
               

               Cow position:
               chr11:16907103-16906847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               26-285
               

               Cow position:
               chr11:34692799-34693061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               26-287
               

               Cow position:
               chr11:5201706-5201460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               69, 141
               

               Conread position:
               26-298
               

               Cow position:
               chr11:64868075-64867798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               69, 258
               

               Conread position:
               26-306
               

               Cow position:
               chr11:48649918-48650191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               202
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               73, 151
               

               Conread position:
               27-193
               

               Cow position:
               chr11:35684555-35684386 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               27-308
               

               Cow position:
               chr11:59024415-59024146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               200
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               12, 95
               

               Conread position:
               28-176
               

               Cow position:
               chr11:18587648-18587499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               118
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               28-180
               

               Cow position:
               chr11:73354112-73353960 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               71, 150
               

               Conread position:
               28-183
               

               Cow position:
               chr11:21910679-21910524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               70, 150
               

               Conread position:
               28-290
               

               Cow position:
               chr11:34644603-34644847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               183
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               71, 54
               

               Conread position:
               28-295
               

               Cow position:
               chr11:30888335-30888064 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               196
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               96, 63
               

               Conread position:
               28-302
               

               Cow position:
               chr11:81762810-81763070 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               69, 50
               

               Conread position:
               29-179
               

               Cow position:
               chr11:83043414-83043263 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               29-181
               

               Cow position:
               chr11:62609554-62609706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               120
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               66, 16
               

               Conread position:
               29-187
               

               Cow position:
               chr11:17227695-17227537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               123
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               11, 69
               

               Conread position:
               29-189
               

               Cow position:
               chr11:30925105-30925264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               69, 116
               

               Conread position:
               29-193
               

               Cow position:
               chr11:52464361-52464521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               119
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               29-196
               

               Cow position:
               chr11:39855064-39854901 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               29-285
               

               Cow position:
               chr11:82731050-82730800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               185
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               9, 178
               

               Conread position:
               29-286
               

               Cow position:
               chr11:72292502-72292746 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               66, 13
               

               Conread position:
               29-307
               

               Cow position:
               chr11:27932224-27932509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               201
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               70, 149
               

               Conread position:
               30-191
               

               Cow position:
               chr11:41215683-41215844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               69, 11
               

               Conread position:
               30-298
               

               Cow position:
               chr11:2639707-2639447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               186
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               70, 137
               

               Conread position:
               31-179
               

               Cow position:
               chr11:64090146-64089998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               64, 135
               

               Conread position:
               31-181
               

               Cow position:
               chr11:11533978-11533830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               16, 118
               

               Conread position:
               32-178
               

               Cow position:
               chr11:46952899-46953046 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               32-180
               

               Cow position:
               chr11:81931160-81931016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               32-181
               

               Cow position:
               chr11:63484898-63485039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               32-190
               

               Cow position:
               chr11:29677154-29677320 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               123
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               32-298
               

               Cow position:
               chr11:6594300-6594032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               45, 160
               

               Conread position:
               33-177
               

               Cow position:
               chr11:61137222-61137077 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               110
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               33-178
               

               Cow position:
               chr11:30867136-30867282 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               107
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               33-180
               

               Cow position:
               chr11:1362515-1362367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               33-180
               

               Cow position:
               chr11:37436033-37435887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               109
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               66, 19
               

               Conread position:
               33-181
               

               Cow position:
               chr11:41809540-41809391 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               33-181
               

               Cow position:
               chr11:62663279-62663133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               33-187
               

               Cow position:
               chr11:33697594-33697744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               116
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               66, 93
               

               Conread position:
               33-191
               

               Cow position:
               chr11:23407417-23407576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               33-191
               

               Cow position:
               chr11:46922933-46922773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               33-193
               

               Cow position:
               chr11:2907570-2907415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               116
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               33-215
               

               Cow position:
               chr11:3234028-3234211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               33-218
               

               Cow position:
               chr11:5789949-5789759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               141
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               33-272
               

               Cow position:
               chr11:19606530-19606765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               62, 146
               

               Conread position:
               33-278
               

               Cow position:
               chr11:50072890-50073132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               62, 144
               

               Conread position:
               33-300
               

               Cow position:
               chr11:62230133-62230386 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               203
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               66, 147
               

               Conread position:
               34-167
               

               Cow position:
               chr11:48512118-48512251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               65, 57
               

               Conread position:
               34-179
               

               Cow position:
               chr11:63920100-63919954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               34-181
               

               Cow position:
               chr11:30172263-30172405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               111
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               34-188
               

               Cow position:
               chr11:27913238-27913393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               118
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               34-189
               

               Cow position:
               chr11:35669998-35669843 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               61, 105
               

               Conread position:
               34-192
               

               Cow position:
               chr11:62376519-62376361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               123
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               64, 86
               

               Conread position:
               34-195
               

               Cow position:
               chr11:3714779-3714936 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               118
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               34-279
               

               Cow position:
               chr11:62754365-62754120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               51, 165
               

               Conread position:
               34-284
               

               Cow position:
               chr11:15382549-15382312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               176
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               63, 168
               

               Conread position:
               34-296
               

               Cow position:
               chr11:83579220-83578951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               63, 7
               

               Conread position:
               35-166
               

               Cow position:
               chr11:31352597-31352465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               101
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               35-177
               

               Cow position:
               chr11:5219204-5219063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               64, 11
               

               Conread position:
               35-187
               

               Cow position:
               chr11:20205897-20205744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               35-284
               

               Cow position:
               chr11:35352083-35351850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               80, 7
               

               Conread position:
               35-293
               

               Cow position:
               chr11:17321602-17321860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               202
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               60, 82
               

               Conread position:
               35-300
               

               Cow position:
               chr11:71854324-71854061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               64, 96
               

               Conread position:
               35-313
               

               Cow position:
               chr11:6267144-6267424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               8, 127
               

               Conread position:
               36-172
               

               Cow position:
               chr11:61130709-61130574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               59, 18
               

               Conread position:
               36-175
               

               Cow position:
               chr11:45849544-45849402 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               36-181
               

               Cow position:
               chr11:56290467-56290613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               36-183
               

               Cow position:
               chr11:897629-897776 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               59, 136
               

               Conread position:
               36-189
               

               Cow position:
               chr11:7874095-7874248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               63, 5
               

               Conread position:
               36-197
               

               Cow position:
               chr11:62889938-62889776 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               37-181
               

               Cow position:
               chr11:30272974-30272838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               110
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               38-195
               

               Cow position:
               chr11:34136201-34136356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               127, 41
               

               Conread position:
               38-197
               

               Cow position:
               chr11:15373796-15373957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               49, 116
               

               Conread position:
               46-298
               

               Cow position:
               chr11:70745571-70745301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               211
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               47, 103
               

               Conread position:
               47-167
               

               Cow position:
               chr11:33763993-33763874 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               97
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               51, 31
               

               Conread position:
               48-177
               

               Cow position:
               chr11:66939625-66939495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               48-186
               

               Cow position:
               chr11:30787191-30787330 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               107
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               48-266
               

               Cow position:
               chr11:65803903-65803681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               48-293
               

               Cow position:
               chr11:58173593-58173827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               190
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               47, 59
               

               Conread position:
               48-315
               

               Cow position:
               chr11:53717839-53717577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               197
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               47, 140
               

               Conread position:
               49-180
               

               Cow position:
               chr11:34968645-34968514 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               50, 77
               

               Conread position:
               50-177
               

               Cow position:
               chr11:69415627-69415501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               101
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               50-179
               

               Cow position:
               chr11:29786529-29786398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               108
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               50-181
               

               Cow position:
               chr11:63382221-63382089 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               100
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               50-181
               

               Cow position:
               chr11:64408946-64409072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               50-181
               

               Cow position:
               chr11:71345354-71345222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               103
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               50-189
               

               Cow position:
               chr11:29946944-29946803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               117
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               50-195
               

               Cow position:
               chr11:69417373-69417517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               50-198
               

               Cow position:
               chr11:62168361-62168213 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               116
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               45, 108
               

               Conread position:
               50-300
               

               Cow position:
               chr11:71110861-71111098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               46, 150
               

               Conread position:
               50-305
               

               Cow position:
               chr11:18509061-18508805 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               48, 158
               

               Conread position:
               50-311
               

               Cow position:
               chr11:58938775-58938505 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               51-181
               

               Cow position:
               chr11:34467541-34467668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               99
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               51-188
               

               Cow position:
               chr11:55052842-55052980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               103
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               51-293
               

               Cow position:
               chr11:17638564-17638327 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               48, 104
               

               Conread position:
               52-179
               

               Cow position:
               chr11:9698874-9698998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               102
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               52-284
               

               Cow position:
               chr11:2900749-2900530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               46, 110
               

               Conread position:
               53-197
               

               Cow position:
               chr11:45350539-45350394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               54-197
               

               Cow position:
               chr11:60486446-60486301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               55-175
               

               Cow position:
               chr11:3248731-3248611 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               92
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               55-311
               

               Cow position:
               chr11:32782909-32782667 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               196
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               44, 122
               

               Conread position:
               56-227
               

               Cow position:
               chr11:60470216-60470052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               125
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               56-294
               

               Cow position:
               chr11:47784750-47784972 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               43, 123
               

               Conread position:
               57-165
               

               Cow position:
               chr11:35363458-35363567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               91
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               58-195
               

               Cow position:
               chr11:25783690-25783828 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               104
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               60-180
               

               Cow position:
               chr11:46884353-46884474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               94
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               60-191
               

               Cow position:
               chr11:15683000-15682868 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               60-195
               

               Cow position:
               chr11:49207691-49207825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               104
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               35, 10
               

               Conread position:
               60-197
               

               Cow position:
               chr11:17517378-17517516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               60-300
               

               Cow position:
               chr11:84775054-84775294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               182
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               35, 96
               

               Conread position:
               61-177
               

               Cow position:
               chr11:42056087-42056204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               92
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               61-179
               

               Cow position:
               chr11:60720475-60720356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               98
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               17, 7
               

               Conread position:
               61-185
               

               Cow position:
               chr11:26535768-26535892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               100
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               85, 67
               

               Conread position:
               62-302
               

               Cow position:
               chr11:66099881-66099655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               174
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               33, 142
               

               Conread position:
               64-181
               

               Cow position:
               chr11:65843090-65842973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               95
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               35, 55
               

               Conread position:
               64-198
               

               Cow position:
               chr11:62808522-62808388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               108
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               36, 51
               

               Conread position:
               65-285
               

               Cow position:
               chr11:37982593-37982364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               65-295
               

               Cow position:
               chr11:52415420-52415644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               182
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               112, 25
               

               Conread position:
               66-179
               

               Cow position:
               chr11:15366987-15366873 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               92
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               66-184
               

               Cow position:
               chr11:81728663-81728544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               96
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               66-282
               

               Cow position:
               chr11:70517610-70517397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               158
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               13, 115
               

               Conread position:
               66-284
               

               Cow position:
               chr11:77208060-77208270 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               170
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               33, 67
               

               Conread position:
               66-290
               

               Cow position:
               chr11:87172091-87171862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               156
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               34, 191
               

               Conread position:
               67-290
               

               Cow position:
               chr11:60296717-60296927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               168
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               31, 37
               

               Conread position:
               67-302
               

               Cow position:
               chr11:70709770-70710012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               172
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               68-181
               

               Cow position:
               chr11:74720712-74720825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               92
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               27, 110
               

               Conread position:
               68-185
               

               Cow position:
               chr11:9699257-9699139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               95
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               68-192
               

               Cow position:
               chr11:49396538-49396413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               97
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               68-193
               

               Cow position:
               chr11:34623159-34623284 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               95
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               68-195
               

               Cow position:
               chr11:41983179-41983050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               103
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               68-197
               

               Cow position:
               chr11:47586071-47585945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               106
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               68-198
               

               Cow position:
               chr11:70639833-70639963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               101
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               30, 102
               

               Conread position:
               68-206
               

               Cow position:
               chr11:71767589-71767728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               107
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               68-280
               

               Cow position:
               chr11:74378862-74379072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               27, 125
               

               Conread position:
               68-283
               

               Cow position:
               chr11:47164931-47164705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               68-285
               

               Cow position:
               chr11:81605846-81606062 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               154
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               153, 0
               

               Conread position:
               69-185
               

               Cow position:
               chr11:3769320-3769203 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               93
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               70-200
               

               Cow position:
               chr11:46452127-46452256 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               103
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               70-204
               

               Cow position:
               chr11:41980215-41980080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               110
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               70-285
               

               Cow position:
               chr11:47110242-47110440 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               70-301
               

               Cow position:
               chr11:22147479-22147712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               11, 88
               

               Conread position:
               71-180
               

               Cow position:
               chr11:9836466-9836356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               88
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               71-306
               

               Cow position:
               chr11:62749478-62749247 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               100, 27
               

               Conread position:
               73-181
               

               Cow position:
               chr11:80586267-80586376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               89
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               73-300
               

               Cow position:
               chr11:36917784-36917566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               26, 68
               

               Conread position:
               76-307
               

               Cow position:
               chr11:25376495-25376720 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               5, 41
               

               Conread position:
               77-195
               

               Cow position:
               chr11:2835855-2835974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               94
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               77-195
               

               Cow position:
               chr11:29482439-29482320 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               100
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               79-185
               

               Cow position:
               chr11:46499009-46499117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               88
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               79-314
               

               Cow position:
               chr11:59916144-59916386 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               80-278
               

               Cow position:
               chr11:4436747-4436938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               15, 100
               

               Conread position:
               80-301
               

               Cow position:
               chr11:80008068-80007863 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               15, 73
               

               Conread position:
               80-309
               

               Cow position:
               chr11:6355922-6355693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               19, 76
               

               Conread position:
               83-185
               

               Cow position:
               chr11:35860585-35860686 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               88
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               12, 21
               

               Conread position:
               83-257
               

               Cow position:
               chr11:42067056-42067227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               16, 129
               

               Conread position:
               83-311
               

               Cow position:
               chr11:61178360-61178601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               182
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               12, 159
               

               Conread position:
               84-205
               

               Cow position:
               chr11:55714447-55714568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               101
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               87-290
               

               Cow position:
               chr11:49486785-49486978 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               153
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               11, 93
               

               Conread position:
               87-303
               

               Cow position:
               chr11:28275411-28275202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               154
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               12, 44
               

               Conread position:
               92-284
               

               Cow position:
               chr11:36251197-36250999 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               93-310
               

               Cow position:
               chr11:75246362-75246579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               132, 19
               

               Conread position:
               94-284
               

               Cow position:
               chr11:71443225-71443039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               106, 47
               

               Conread position:
               94-287
               

               Cow position:
               chr11:434859-434674 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               94-287
               

               Cow position:
               chr11:952284-952472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               98-306
               

               Cow position:
               chr11:13843466-13843678 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               163
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               99-287
               

               Cow position:
               chr11:80596357-80596541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               149
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               102-276
               

               Cow position:
               chr11:6024562-6024387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               130
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               105-295
               

               Cow position:
               chr11:25614788-25614609 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               111-297
               

               Cow position:
               chr11:63640841-63640661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               114-276
               

               Cow position:
               chr11:2864038-2864198 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               120-284
               

               Cow position:
               chr11:81173266-81173103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               133-294
               

               Cow position:
               chr11:19788193-19788348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               121
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               146, 46
               

               Conread position:
               146-297
               

               Cow position:
               chr11:76995252-76995097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               72, 31
               

               Conread position:
               159-290
               

               Cow position:
               chr11:51743186-51743311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               161-279
               

               Cow position:
               chr11:40572992-40572874 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               94
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               207-309
               

               Cow position:
               chr11:35684168-35684065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               86
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               213-310
               

               Cow position:
               chr11:16314986-16315083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               98
               

               Alignm identity:
               81
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               213-314
               

               Cow position:
               chr11:2084257-2084359 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               84
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               215-315
               

               Cow position:
               chr11:8359450-8359350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               101
               

               Alignm identity:
               84
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.
Conread position:	1-161
Cow position:	chr11:13040245-13040090 (view UCSC Genome Browser custom track)
Alignm length:	162
Alignm identity:	118
Alignm E-value:	2e-21
Alignm gaps (pig, cow):	95, 31
Conread position:	1-181
Cow position:	chr11:44636836-44636653 (view UCSC Genome Browser custom track)
Alignm length:	185
Alignm identity:	136
Alignm E-value:	5e-28
Alignm gaps (pig, cow):	22, 172
Conread position:	1-185
Cow position:	chr11:35213248-35213062 (view UCSC Genome Browser custom track)
Alignm length:	187
Alignm identity:	135
Alignm E-value:	2e-28
Alignm gaps (pig, cow):	37, 0
Conread position:	1-191
Cow position:	chr11:42066780-42066976 (view UCSC Genome Browser custom track)
Alignm length:	199
Alignm identity:	148
Alignm E-value:	7e-31
Alignm gaps (pig, cow):	36, 67
Conread position:	1-193
Cow position:	chr11:25386986-25387181 (view UCSC Genome Browser custom track)
Alignm length:	197
Alignm identity:	142
Alignm E-value:	1e-27
Alignm gaps (pig, cow):	34, 175
Conread position:	1-205
Cow position:	chr11:69015893-69016101 (view UCSC Genome Browser custom track)
Alignm length:	209
Alignm identity:	144
Alignm E-value:	1e-24
Alignm gaps (pig, cow):	23, 0
Conread position:	2-136
Cow position:	chr11:7299055-7299191 (view UCSC Genome Browser custom track)
Alignm length:	138
Alignm identity:	106
Alignm E-value:	3e-22
Alignm gaps (pig, cow):	30, 18
Conread position:	2-144
Cow position:	chr11:35709194-35709051 (view UCSC Genome Browser custom track)
Alignm length:	145
Alignm identity:	108
Alignm E-value:	8e-22
Alignm gaps (pig, cow):	38, 18
Conread position:	2-166
Cow position:	chr11:53279792-53279628 (view UCSC Genome Browser custom track)
Alignm length:	167
Alignm identity:	119
Alignm E-value:	8e-22
Alignm gaps (pig, cow):	33, 98
Conread position:	2-175
Cow position:	chr11:1157569-1157739 (view UCSC Genome Browser custom track)
Alignm length:	174
Alignm identity:	132
Alignm E-value:	2e-31
Alignm gaps (pig, cow):	23, 0
Conread position:	2-177
Cow position:	chr11:13864179-13864006 (view UCSC Genome Browser custom track)
Alignm length:	178
Alignm identity:	134
Alignm E-value:	2e-28
Alignm gaps (pig, cow):	97, 17
Conread position:	2-178
Cow position:	chr11:4663123-4662949 (view UCSC Genome Browser custom track)
Alignm length:	178
Alignm identity:	132
Alignm E-value:	2e-28
Alignm gaps (pig, cow):	91, 35
Conread position:	2-179
Cow position:	chr11:1067520-1067340 (view UCSC Genome Browser custom track)
Alignm length:	182
Alignm identity:	142
Alignm E-value:	3e-35
Alignm gaps (pig, cow):	30, 17
Conread position:	2-180
Cow position:	chr11:30209900-30209722 (view UCSC Genome Browser custom track)
Alignm length:	182
Alignm identity:	135
Alignm E-value:	5e-28
Alignm gaps (pig, cow):	39, 18
Conread position:	2-181
Cow position:	chr11:70278185-70278011 (view UCSC Genome Browser custom track)
Alignm length:	181
Alignm identity:	133
Alignm E-value:	1e-25
Alignm gaps (pig, cow):	97, 40
Conread position:	2-185
Cow position:	chr11:32254295-32254108 (view UCSC Genome Browser custom track)
Alignm length:	189
Alignm identity:	142
Alignm E-value:	2e-31
Alignm gaps (pig, cow):	93, 154
Conread position:	2-187
Cow position:	chr11:47724825-47725004 (view UCSC Genome Browser custom track)
Alignm length:	187
Alignm identity:	131
Alignm E-value:	2e-21
Alignm gaps (pig, cow):	36, 65
Conread position:	2-189
Cow position:	chr11:43898062-43898248 (view UCSC Genome Browser custom track)
Alignm length:	191
Alignm identity:	137
Alignm E-value:	3e-24
Alignm gaps (pig, cow):	88, 23
Conread position:	2-195
Cow position:	chr11:1380597-1380791 (view UCSC Genome Browser custom track)
Alignm length:	196
Alignm identity:	151
Alignm E-value:	2e-38
Alignm gaps (pig, cow):	37, 23
Conread position:	2-198
Cow position:	chr11:71492932-71492743 (view UCSC Genome Browser custom track)
Alignm length:	197
Alignm identity:	152
Alignm E-value:	1e-37
Alignm gaps (pig, cow):	27, 0