Cow genome map

Conread name: rnbm38b_e15.y1

Conread position: 2-187
Cow position: chr12:24437443-24437631 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 136
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 38, 109

Conread position: 5-187
Cow position: chr12:42684754-42684941 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 143
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 17, 41

Conread position: 9-187
Cow position: chr12:4512270-4512446 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 135
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 62, 102

Conread position: 10-183
Cow position: chr12:20776749-20776916 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 130
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 61, 101

Conread position: 11-187
Cow position: chr12:37169770-37169942 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 134
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 58, 72

Conread position: 12-183
Cow position: chr12:7110387-7110205 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 134
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 14, 0

Conread position: 12-183
Cow position: chr12:33976381-33976207 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 130
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 62, 105

Conread position: 12-187
Cow position: chr12:19261375-19261199 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 22, 94

Conread position: 13-183
Cow position: chr12:8943037-8943216 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 24, 0

Conread position: 14-182
Cow position: chr12:29674963-29675133 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 120
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 60, 96

Conread position: 14-184
Cow position: chr12:12301102-12300926 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 131
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 59, 21

Conread position: 15-184
Cow position: chr12:37008536-37008700 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 55, 20

Conread position: 15-187
Cow position: chr12:6241500-6241323 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 130
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 10, 0

Conread position: 15-187
Cow position: chr12:19502239-19502424 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 136
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 60, 0

Conread position: 16-173
Cow position: chr12:46106963-46106805 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 57, 92

Conread position: 16-177
Cow position: chr12:29180848-29180689 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 120
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 54, 94

Conread position: 16-181
Cow position: chr12:3454871-3454704 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 123
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 56, 45

Conread position: 16-182
Cow position: chr12:7884507-7884672 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 131
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 55, 19

Conread position: 16-183
Cow position: chr12:14223157-14222989 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 124
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 54, 94

Conread position: 16-183
Cow position: chr12:26749776-26749944 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 121
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 54, 92

Conread position: 16-185
Cow position: chr12:39149875-39150046 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 123
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 56, 94

Conread position: 16-186
Cow position: chr12:2964219-2964052 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 128
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 58, 12

Conread position: 16-187
Cow position: chr12:14986921-14986753 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 134
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 58, 95

Conread position: 20-187
Cow position: chr12:18518842-18518677 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 126
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 55, 83

Conread position: 22-177
Cow position: chr12:42163210-42163054 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 116
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 78, 105

Conread position: 22-182
Cow position: chr12:18978856-18978696 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 118
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 12, 74

Conread position: 22-187
Cow position: chr12:15703327-15703494 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 129
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 49, 95

Conread position: 23-183
Cow position: chr12:6480810-6480648 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 122
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 17, 80

Conread position: 23-185
Cow position: chr12:23836501-23836335 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 120
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 51, 38

Conread position: 23-186
Cow position: chr12:23714839-23714680 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 125
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 50, 67

Conread position: 23-187
Cow position: chr12:1952641-1952798 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 132
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 51, 13

Conread position: 23-187
Cow position: chr12:5135399-5135236 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 121
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 52, 77

Conread position: 23-187
Cow position: chr12:9143553-9143391 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 120
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 22, 90

Conread position: 23-187
Cow position: chr12:33851523-33851361 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 132
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 50, 87

Conread position: 24-183
Cow position: chr12:42879865-42879702 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 128
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 50, 115

Conread position: 24-186
Cow position: chr12:24181309-24181152 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 125
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 50, 79

Conread position: 25-187
Cow position: chr12:25814322-25814157 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 122
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 47, 89

Conread position: 25-187
Cow position: chr12:38009919-38010083 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 35, 88

Conread position: 26-182
Cow position: chr12:5635287-5635444 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 11, 76

Conread position: 27-183
Cow position: chr12:44861094-44861252 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 123
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 46, 83

Conread position: 30-183
Cow position: chr12:37256178-37256021 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 116
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 40, 0

Conread position: 30-187
Cow position: chr12:22485973-22485810 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 127
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 43, 84

Conread position: 32-173
Cow position: chr12:15151718-15151851 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 10, 0

Conread position: 32-183
Cow position: chr12:35770866-35771013 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 111
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 32-184
Cow position: chr12:4341577-4341737 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 32-184
Cow position: chr12:26217669-26217817 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 115
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 39, 78

Conread position: 32-186
Cow position: chr12:15429439-15429591 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 114
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 88, 65

Conread position: 32-187
Cow position: chr12:16670424-16670271 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 114
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 85, 0

Conread position: 32-187
Cow position: chr12:26576050-26575900 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 123
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 40, 68

Conread position: 33-183
Cow position: chr12:48415363-48415508 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 37, 63

Conread position: 35-162
Cow position: chr12:3579639-3579513 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 101
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 39, 81

Conread position: 35-168
Cow position: chr12:11660082-11659944 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 110
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 72, 40

Conread position: 35-171
Cow position: chr12:18418587-18418449 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 105
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 70, 36

Conread position: 35-173
Cow position: chr12:30806008-30805876 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 113
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 8, 38

Conread position: 35-174
Cow position: chr12:17332029-17331885 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 114
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 37, 130

Conread position: 35-178
Cow position: chr12:583349-583497 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 39, 0

Conread position: 35-179
Cow position: chr12:10833976-10834121 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 8, 58

Conread position: 35-180
Cow position: chr12:29316307-29316451 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 108
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 118, 39

Conread position: 35-183
Cow position: chr12:2835560-2835411 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 34, 93

Conread position: 35-183
Cow position: chr12:20637383-20637528 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 39, 75

Conread position: 35-183
Cow position: chr12:22048079-22047929 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 111
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 39, 75

Conread position: 35-183
Cow position: chr12:26357212-26357363 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 112
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 37, 91

Conread position: 35-183
Cow position: chr12:38774090-38774235 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 37, 75

Conread position: 35-186
Cow position: chr12:7902650-7902794 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 120
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 39, 62

Conread position: 35-187
Cow position: chr12:4014267-4014429 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 127
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 38, 0

Conread position: 35-187
Cow position: chr12:15089671-15089520 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 116
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 34, 75

Conread position: 35-187
Cow position: chr12:17879150-17879297 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 118
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 37, 65

Conread position: 35-187
Cow position: chr12:18123821-18123673 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 118
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 39, 68

Conread position: 35-187
Cow position: chr12:18582844-18582989 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 64, 0

Conread position: 35-187
Cow position: chr12:19272535-19272685 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 118
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 39, 76

Conread position: 35-187
Cow position: chr12:24032643-24032500 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 120
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 39, 18

Conread position: 35-187
Cow position: chr12:25561521-25561373 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 123
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 39, 67

Conread position: 35-187
Cow position: chr12:32169701-32169544 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 117
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 43, 0

Conread position: 35-187
Cow position: chr12:33129409-33129258 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 121
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 39, 76

Conread position: 35-187
Cow position: chr12:36261849-36261693 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 119
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 40, 0

Conread position: 36-175
Cow position: chr12:19056830-19056688 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 32, 56

Conread position: 36-183
Cow position: chr12:20479190-20479330 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 110
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 25, 0

Conread position: 36-186
Cow position: chr12:38679202-38679054 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 118
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 38, 67

Conread position: 36-186
Cow position: chr12:44622514-44622353 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 124
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 33, 0

Conread position: 37-182
Cow position: chr12:30590922-30590776 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 113
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 34, 51

Conread position: 37-183
Cow position: chr12:25456574-25456417 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 118
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 37-183
Cow position: chr12:41159734-41159595 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 115
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 24, 0

Conread position: 37-186
Cow position: chr12:33949053-33948909 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 122
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 37, 21

Conread position: 37-187
Cow position: chr12:25528409-25528556 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 122
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 39, 20

Conread position: 37-187
Cow position: chr12:29731464-29731318 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 32, 75

Conread position: 39-187
Cow position: chr12:42180977-42181125 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 33, 63

Conread position: 40-187
Cow position: chr12:24186327-24186487 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 42-179
Cow position: chr12:23574918-23574775 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 30, 0

Conread position: 42-183
Cow position: chr12:31532261-31532396 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 52, 0

Conread position: 42-187
Cow position: chr12:15122473-15122330 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 116
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 32, 61

Conread position: 42-187
Cow position: chr12:20439114-20439253 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 32, 61

Conread position: 43-184
Cow position: chr12:30919581-30919432 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 112
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 43-187
Cow position: chr12:6410589-6410731 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 110
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 29, 34

Conread position: 48-183
Cow position: chr12:24663262-24663122 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 26, 0

Conread position: 53-187
Cow position: chr12:25917139-25917272 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 21, 63

Show alignments to all cow chromosomes.