Cow genome map
| Conread name: | rnbm38b_e15.y1 |
| Conread position: | 1-186 |
| Cow position: | chr14:41486454-41486260 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 140 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 73, 85 |
| Conread position: | 2-182 |
| Cow position: | chr14:33714859-33714683 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 135 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 16, 95 |
| Conread position: | 4-181 |
| Cow position: | chr14:2852968-2853144 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 70, 106 |
| Conread position: | 9-183 |
| Cow position: | chr14:5959167-5958991 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 65, 24 |
| Conread position: | 12-181 |
| Cow position: | chr14:23465225-23465055 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 57, 23 |
| Conread position: | 12-183 |
| Cow position: | chr14:10858268-10858429 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 133 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 56, 10 |
| Conread position: | 12-184 |
| Cow position: | chr14:6736042-6735867 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 45, 109 |
| Conread position: | 15-181 |
| Cow position: | chr14:49501179-49501012 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 39, 99 |
| Conread position: | 15-185 |
| Cow position: | chr14:49487793-49487959 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 59, 83 |
| Conread position: | 16-182 |
| Cow position: | chr14:20667173-20667013 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 127 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 57, 18 |
| Conread position: | 16-183 |
| Cow position: | chr14:6541897-6541728 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 56, 93 |
| Conread position: | 16-183 |
| Cow position: | chr14:21593171-21593007 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 127 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 54, 31 |
| Conread position: | 16-183 |
| Cow position: | chr14:29734529-29734368 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 58, 19 |
| Conread position: | 16-183 |
| Cow position: | chr14:39097335-39097504 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 56, 19 |
| Conread position: | 16-183 |
| Cow position: | chr14:45955117-45955287 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 38, 102 |
| Conread position: | 16-184 |
| Cow position: | chr14:47673048-47672884 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 28, 19 |
| Conread position: | 16-186 |
| Cow position: | chr14:11056901-11056731 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 57, 18 |
| Conread position: | 16-187 |
| Cow position: | chr14:18301786-18301961 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 91, 51 |
| Conread position: | 17-187 |
| Cow position: | chr14:33618137-33618303 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 17, 88 |
| Conread position: | 21-186 |
| Cow position: | chr14:24945657-24945492 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 84, 13 |
| Conread position: | 21-187 |
| Cow position: | chr14:25903367-25903531 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 49, 82 |
| Conread position: | 22-182 |
| Cow position: | chr14:5630003-5630157 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 16, 72 |
| Conread position: | 23-175 |
| Cow position: | chr14:12033408-12033247 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 51, 136 |
| Conread position: | 23-185 |
| Cow position: | chr14:24785495-24785656 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 14, 75 |
| Conread position: | 24-181 |
| Cow position: | chr14:20482014-20481846 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 31-187 |
| Cow position: | chr14:41966070-41966231 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 53, 44 |
| Conread position: | 32-178 |
| Cow position: | chr14:25227993-25228135 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 115 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 42, 77 |
| Conread position: | 32-181 |
| Cow position: | chr14:27653007-27653158 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 40, 78 |
| Conread position: | 32-183 |
| Cow position: | chr14:4860343-4860498 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 42, 115 |
| Conread position: | 32-183 |
| Cow position: | chr14:32784272-32784119 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 37, 78 |
| Conread position: | 32-186 |
| Cow position: | chr14:33791039-33791190 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 121 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 37, 70 |
| Conread position: | 32-187 |
| Cow position: | chr14:13845840-13845985 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 119 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 32-187 |
| Cow position: | chr14:48838437-48838595 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 39, 79 |
| Conread position: | 35-164 |
| Cow position: | chr14:12142067-12141937 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 37, 73 |
| Conread position: | 35-172 |
| Cow position: | chr14:24236671-24236809 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 38, 92 |
| Conread position: | 35-181 |
| Cow position: | chr14:36166789-36166936 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 110 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 39, 75 |
| Conread position: | 35-182 |
| Cow position: | chr14:47200285-47200129 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 35-183 |
| Cow position: | chr14:4282661-4282510 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 112 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 35-183 |
| Cow position: | chr14:10609528-10609676 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 109 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 34, 73 |
| Conread position: | 35-183 |
| Cow position: | chr14:13731248-13731102 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 116 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 38, 72 |
| Conread position: | 35-183 |
| Cow position: | chr14:20736463-20736607 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 113 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 36, 74 |
| Conread position: | 35-183 |
| Cow position: | chr14:20915132-20914981 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 117 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 37, 71 |
| Conread position: | 35-183 |
| Cow position: | chr14:27364426-27364576 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 37, 75 |
| Conread position: | 35-183 |
| Cow position: | chr14:36559377-36559230 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 113 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 35, 75 |
| Conread position: | 35-183 |
| Cow position: | chr14:38747528-38747674 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 39, 21 |
| Conread position: | 35-184 |
| Cow position: | chr14:42330195-42330352 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 35-185 |
| Cow position: | chr14:21357406-21357556 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 39, 77 |
| Conread position: | 35-186 |
| Cow position: | chr14:20466785-20466936 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 37, 75 |
| Conread position: | 35-186 |
| Cow position: | chr14:24746305-24746465 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 35-186 |
| Cow position: | chr14:47224523-47224366 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 118 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 35-187 |
| Cow position: | chr14:4848199-4848348 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 35-187 |
| Cow position: | chr14:8949500-8949650 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 39, 62 |
| Conread position: | 35-187 |
| Cow position: | chr14:9307915-9308065 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 116 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 40, 25 |
| Conread position: | 35-187 |
| Cow position: | chr14:10078103-10078268 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 134 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 35-187 |
| Cow position: | chr14:10851876-10852033 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 118 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 38, 91 |
| Conread position: | 35-187 |
| Cow position: | chr14:11604733-11604882 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 112 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 19, 73 |
| Conread position: | 35-187 |
| Cow position: | chr14:11643397-11643249 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 39, 67 |
| Conread position: | 35-187 |
| Cow position: | chr14:13042608-13042758 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 116 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 40, 62 |
| Conread position: | 35-187 |
| Cow position: | chr14:15470137-15469981 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 118 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 38, 98 |
| Conread position: | 35-187 |
| Cow position: | chr14:20110873-20110722 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 13, 80 |
| Conread position: | 35-187 |
| Cow position: | chr14:20640780-20640629 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 39, 76 |
| Conread position: | 35-187 |
| Cow position: | chr14:22988884-22989034 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 39, 68 |
| Conread position: | 35-187 |
| Cow position: | chr14:36151173-36151325 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 40, 76 |
| Conread position: | 35-187 |
| Cow position: | chr14:41156871-41156724 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 37-187 |
| Cow position: | chr14:10706729-10706876 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 116 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 37, 75 |
| Conread position: | 38-187 |
| Cow position: | chr14:42546708-42546553 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 38, 146 |
| Conread position: | 39-183 |
| Cow position: | chr14:48426925-48427070 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 31, 79 |
| Conread position: | 41-187 |
| Cow position: | chr14:27848034-27848185 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 111 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 42-187 |
| Cow position: | chr14:11280257-11280113 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 32, 69 |
| Conread position: | 42-187 |
| Cow position: | chr14:15228400-15228540 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 33, 11 |
| Conread position: | 43-183 |
| Cow position: | chr14:24387308-24387437 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 108 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 44-187 |
| Cow position: | chr14:21933487-21933343 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 29, 66 |
| Conread position: | 45-183 |
| Cow position: | chr14:1646325-1646187 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 24, 57 |
| Conread position: | 45-183 |
| Cow position: | chr14:41191239-41191099 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 105 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 27, 68 |
| Conread position: | 53-186 |
| Cow position: | chr14:21530209-21530074 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 110 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 21, 57 |
Show alignments to all cow chromosomes.