Cow genome map

Conread name: rnbm38b_e15.y1

Conread position: 2-187
Cow position: chr18:44205898-44206075 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 138
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 32, 68

Conread position: 3-187
Cow position: chr18:12143754-12143941 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 137
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 32, 99

Conread position: 11-178
Cow position: chr18:3158400-3158577 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 134
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 61, 24

Conread position: 11-183
Cow position: chr18:21143783-21143950 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 135
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 9, 82

Conread position: 11-185
Cow position: chr18:4485784-4485610 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 135
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 23, 105

Conread position: 12-178
Cow position: chr18:34490464-34490299 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 123
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 60, 98

Conread position: 12-180
Cow position: chr18:11867520-11867355 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 132
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 60, 23

Conread position: 12-183
Cow position: chr18:52251668-52251844 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 129
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 13, 109

Conread position: 12-187
Cow position: chr18:14225573-14225403 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 128
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 22, 89

Conread position: 12-187
Cow position: chr18:41024936-41025120 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 142
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 62, 23

Conread position: 14-186
Cow position: chr18:49015301-49015135 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 135
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 24, 88

Conread position: 15-187
Cow position: chr18:48407912-48407748 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 130
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 47, 0

Conread position: 15-187
Cow position: chr18:52649159-52649338 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 136
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 59, 125

Conread position: 16-154
Cow position: chr18:50095230-50095367 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 53, 94

Conread position: 16-166
Cow position: chr18:37804808-37804669 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 117
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 12, 0

Conread position: 16-183
Cow position: chr18:1954401-1954576 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 134
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 58, 0

Conread position: 16-186
Cow position: chr18:2773208-2773382 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 59, 0

Conread position: 16-186
Cow position: chr18:2776711-2776885 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 127
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 59, 0

Conread position: 16-187
Cow position: chr18:37189112-37189285 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 127
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 22, 103

Conread position: 16-187
Cow position: chr18:44917933-44917766 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 58, 69

Conread position: 17-178
Cow position: chr18:42431914-42432071 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 122
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 52, 91

Conread position: 19-183
Cow position: chr18:30359967-30360136 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 133
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 55, 98

Conread position: 19-183
Cow position: chr18:50004530-50004692 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 55, 95

Conread position: 19-183
Cow position: chr18:50384292-50384123 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 125
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 5, 32

Conread position: 20-175
Cow position: chr18:16417323-16417474 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 122
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 54, 15

Conread position: 20-178
Cow position: chr18:43057068-43056909 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 119
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 53, 93

Conread position: 21-183
Cow position: chr18:24508059-24508218 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 126
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 86, 40

Conread position: 21-183
Cow position: chr18:25598060-25598219 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 133
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 53, 14

Conread position: 22-187
Cow position: chr18:50276068-50276234 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 14, 89

Conread position: 23-168
Cow position: chr18:25139733-25139588 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 116
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 49, 87

Conread position: 23-181
Cow position: chr18:19701856-19701691 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 122
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 19, 23

Conread position: 23-183
Cow position: chr18:1549368-1549536 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 128
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 50, 0

Conread position: 23-183
Cow position: chr18:52414139-52413980 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 127
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 84, 30

Conread position: 23-186
Cow position: chr18:34876944-34876780 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 121
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 47, 105

Conread position: 23-186
Cow position: chr18:49602870-49603033 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 130
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 51, 87

Conread position: 23-187
Cow position: chr18:10977043-10977202 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 121
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 74, 0

Conread position: 23-187
Cow position: chr18:11791090-11790930 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 128
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 51, 30

Conread position: 23-187
Cow position: chr18:34444565-34444727 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 124
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 51, 88

Conread position: 23-187
Cow position: chr18:42978460-42978636 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 136
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 51, 0

Conread position: 23-187
Cow position: chr18:43796787-43796946 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 128
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 52, 71

Conread position: 24-181
Cow position: chr18:19809512-19809667 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 52, 76

Conread position: 24-186
Cow position: chr18:15613693-15613850 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 129
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 48, 73

Conread position: 24-187
Cow position: chr18:41724643-41724809 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 122
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 90, 0

Conread position: 24-187
Cow position: chr18:51383227-51383388 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 129
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 50, 85

Conread position: 25-184
Cow position: chr18:43014699-43014855 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 121
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 11, 73

Conread position: 25-187
Cow position: chr18:3085337-3085507 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 124
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 49, 0

Conread position: 28-175
Cow position: chr18:104223-104070 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 114
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 40, 0

Conread position: 28-182
Cow position: chr18:10757890-10758041 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 116
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 79, 44

Conread position: 28-182
Cow position: chr18:37002804-37002646 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 46, 0

Conread position: 29-183
Cow position: chr18:44548581-44548733 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 119
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 45, 11

Conread position: 30-184
Cow position: chr18:56183335-56183494 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 43, 104

Conread position: 31-181
Cow position: chr18:3417330-3417173 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 118
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 43, 0

Conread position: 31-183
Cow position: chr18:46048918-46048765 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 116
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 41, 82

Conread position: 31-187
Cow position: chr18:9366086-9365930 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 121
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 43, 71

Conread position: 31-187
Cow position: chr18:33159107-33158951 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 126
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 41, 72

Conread position: 32-158
Cow position: chr18:51398171-51398295 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 44, 79

Conread position: 32-177
Cow position: chr18:19961973-19962125 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 40, 0

Conread position: 32-182
Cow position: chr18:42747762-42747602 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 123
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 11, 0

Conread position: 32-183
Cow position: chr18:3097862-3098019 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 119
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 41, 0

Conread position: 32-183
Cow position: chr18:12059157-12059010 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 40, 68

Conread position: 32-183
Cow position: chr18:16137115-16137268 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 75, 0

Conread position: 32-183
Cow position: chr18:24719472-24719326 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 12, 64

Conread position: 32-186
Cow position: chr18:4489738-4489898 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 127
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 41, 0

Conread position: 32-187
Cow position: chr18:1571076-1571228 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 124
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 36, 66

Conread position: 32-187
Cow position: chr18:8170928-8171076 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 41, 77

Conread position: 32-187
Cow position: chr18:30341019-30341175 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 126
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 42, 67

Conread position: 32-187
Cow position: chr18:47547819-47547977 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 31, 42

Conread position: 34-187
Cow position: chr18:28322814-28322666 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 121
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 39, 69

Conread position: 35-165
Cow position: chr18:18520641-18520770 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 109
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 39, 69

Conread position: 35-172
Cow position: chr18:10117896-10117764 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 111
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 35, 62

Conread position: 35-181
Cow position: chr18:21751540-21751393 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 35, 75

Conread position: 35-182
Cow position: chr18:4907304-4907161 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 108
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 78, 0

Conread position: 35-182
Cow position: chr18:31159112-31159259 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 118
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 35, 73

Conread position: 35-183
Cow position: chr18:4556004-4556156 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 37, 68

Conread position: 35-183
Cow position: chr18:15351568-15351717 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 110
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 81, 72

Conread position: 35-183
Cow position: chr18:18844171-18844029 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 39, 57

Conread position: 35-183
Cow position: chr18:27637652-27637505 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 37, 25

Conread position: 35-183
Cow position: chr18:50359485-50359345 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 37, 62

Conread position: 35-183
Cow position: chr18:55722660-55722514 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 35, 68

Conread position: 35-187
Cow position: chr18:9010865-9010717 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 117
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 39, 68

Conread position: 35-187
Cow position: chr18:9089851-9089708 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 65, 0

Conread position: 35-187
Cow position: chr18:12242437-12242283 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 117
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 39, 74

Conread position: 35-187
Cow position: chr18:12270672-12270510 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 123
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 39, 0

Conread position: 35-187
Cow position: chr18:17390830-17390984 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 128
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 36, 62

Conread position: 35-187
Cow position: chr18:22568908-22569057 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 39, 67

Conread position: 35-187
Cow position: chr18:28930481-28930627 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 118
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 39, 62

Conread position: 35-187
Cow position: chr18:35786213-35786065 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 34, 50

Conread position: 35-187
Cow position: chr18:38601724-38601875 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 117
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 10, 63

Conread position: 35-187
Cow position: chr18:41702994-41702843 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 121
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 37, 67

Conread position: 35-187
Cow position: chr18:45558303-45558157 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 126
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 38, 60

Conread position: 35-187
Cow position: chr18:50632285-50632433 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 122
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 39, 59

Conread position: 36-182
Cow position: chr18:47680669-47680528 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 38, 75

Conread position: 36-182
Cow position: chr18:47865226-47865085 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 38, 75

Conread position: 36-187
Cow position: chr18:38937979-38937830 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 36, 78

Conread position: 37-186
Cow position: chr18:35534992-35535136 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 111
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 62, 0

Conread position: 37-187
Cow position: chr18:11672211-11672052 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 123
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 37, 150

Conread position: 37-187
Cow position: chr18:22789932-22790079 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 32, 65

Conread position: 38-187
Cow position: chr18:49441000-49440850 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 119
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 36, 64

Conread position: 42-187
Cow position: chr18:45903743-45903888 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 119
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 32, 68

Conread position: 42-187
Cow position: chr18:49038607-49038471 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 25, 0

Conread position: 43-178
Cow position: chr18:48000676-48000808 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 30, 68

Conread position: 44-183
Cow position: chr18:47419946-47419812 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 111
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 30, 53

Conread position: 44-186
Cow position: chr18:11779804-11779663 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 30, 67

Conread position: 45-183
Cow position: chr18:23821679-23821819 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 105
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 27, 65

Show alignments to all cow chromosomes.