Cow genome map
| Conread name: | rnbm38b_e15.y1 |
| Conread position: | 3-187 |
| Cow position: | chr20:12420350-12420533 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 37, 114 |
| Conread position: | 4-183 |
| Cow position: | chr20:297738-297919 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 68, 31 |
| Conread position: | 5-176 |
| Cow position: | chr20:15530132-15529956 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 34, 108 |
| Conread position: | 13-183 |
| Cow position: | chr20:6054249-6054420 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 125 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 61, 96 |
| Conread position: | 13-183 |
| Cow position: | chr20:24712098-24711930 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 13-187 |
| Cow position: | chr20:25161871-25162040 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 21, 9 |
| Conread position: | 14-181 |
| Cow position: | chr20:3141832-3141665 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 58, 47 |
| Conread position: | 15-178 |
| Cow position: | chr20:28605462-28605303 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 126 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 60, 87 |
| Conread position: | 16-181 |
| Cow position: | chr20:34097693-34097862 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 56, 94 |
| Conread position: | 16-183 |
| Cow position: | chr20:19328654-19328477 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 12, 133 |
| Conread position: | 16-187 |
| Cow position: | chr20:7737977-7738146 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 12, 89 |
| Conread position: | 16-187 |
| Cow position: | chr20:38515045-38514864 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 22, 143 |
| Conread position: | 17-167 |
| Cow position: | chr20:31468401-31468557 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 117 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 20, 87 |
| Conread position: | 17-183 |
| Cow position: | chr20:37358115-37357945 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 15, 95 |
| Conread position: | 17-186 |
| Cow position: | chr20:10956562-10956400 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 53, 23 |
| Conread position: | 21-183 |
| Cow position: | chr20:6240270-6240431 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 52, 90 |
| Conread position: | 21-183 |
| Cow position: | chr20:20984246-20984081 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 53, 14 |
| Conread position: | 21-187 |
| Cow position: | chr20:12581706-12581869 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 53, 82 |
| Conread position: | 21-187 |
| Cow position: | chr20:14880037-14879874 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 19, 83 |
| Conread position: | 22-178 |
| Cow position: | chr20:14980258-14980411 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 52, 81 |
| Conread position: | 23-181 |
| Cow position: | chr20:8556019-8556178 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 127 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 11, 75 |
| Conread position: | 23-183 |
| Cow position: | chr20:17733308-17733470 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 118 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 49, 89 |
| Conread position: | 23-184 |
| Cow position: | chr20:19746220-19746059 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 127 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 34, 89 |
| Conread position: | 23-184 |
| Cow position: | chr20:23506184-23506023 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 51, 16 |
| Conread position: | 23-187 |
| Cow position: | chr20:20158379-20158221 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 47, 80 |
| Conread position: | 24-183 |
| Cow position: | chr20:27315223-27315067 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 48, 78 |
| Conread position: | 24-183 |
| Cow position: | chr20:40303635-40303798 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 119 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 24-187 |
| Cow position: | chr20:20590057-20590216 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 47, 88 |
| Conread position: | 24-187 |
| Cow position: | chr20:26040850-26041013 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 123 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 58, 92 |
| Conread position: | 25-181 |
| Cow position: | chr20:5078523-5078363 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 26-183 |
| Cow position: | chr20:26790355-26790522 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 28-187 |
| Cow position: | chr20:3148924-3148769 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 46, 81 |
| Conread position: | 31-183 |
| Cow position: | chr20:3599162-3599311 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 114 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 117, 71 |
| Conread position: | 31-187 |
| Cow position: | chr20:14807123-14806972 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 123 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 43, 80 |
| Conread position: | 32-184 |
| Cow position: | chr20:8021376-8021214 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 119 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 32-187 |
| Cow position: | chr20:16977598-16977759 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 35-178 |
| Cow position: | chr20:38061537-38061672 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 39, 60 |
| Conread position: | 35-182 |
| Cow position: | chr20:4945014-4945165 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 113 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 35-183 |
| Cow position: | chr20:4891882-4892030 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 40, 75 |
| Conread position: | 35-183 |
| Cow position: | chr20:10209043-10208898 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 39, 75 |
| Conread position: | 35-183 |
| Cow position: | chr20:11359403-11359543 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 114 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 35-183 |
| Cow position: | chr20:14283159-14283009 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 37, 75 |
| Conread position: | 35-183 |
| Cow position: | chr20:21721456-21721299 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 117 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 35-183 |
| Cow position: | chr20:34202878-34202724 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 35-183 |
| Cow position: | chr20:34881167-34881308 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 114 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 35-184 |
| Cow position: | chr20:23846429-23846576 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 117 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 39, 75 |
| Conread position: | 35-187 |
| Cow position: | chr20:381898-382047 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 39, 18 |
| Conread position: | 35-187 |
| Cow position: | chr20:3255270-3255121 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 39, 68 |
| Conread position: | 35-187 |
| Cow position: | chr20:20099366-20099515 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 73, 25 |
| Conread position: | 35-187 |
| Cow position: | chr20:23358258-23358409 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 39, 74 |
| Conread position: | 35-187 |
| Cow position: | chr20:25009397-25009547 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 40, 68 |
| Conread position: | 35-187 |
| Cow position: | chr20:26387692-26387546 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 35-187 |
| Cow position: | chr20:29845291-29845136 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 38, 106 |
| Conread position: | 35-187 |
| Cow position: | chr20:38090152-38089998 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 34, 75 |
| Conread position: | 37-183 |
| Cow position: | chr20:12126067-12126215 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 35, 73 |
| Conread position: | 37-183 |
| Cow position: | chr20:21345673-21345522 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 37-187 |
| Cow position: | chr20:5078870-5078712 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 37-187 |
| Cow position: | chr20:15766350-15766196 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 26, 69 |
| Conread position: | 38-187 |
| Cow position: | chr20:40422865-40423018 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 39-183 |
| Cow position: | chr20:5365160-5365015 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 109 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 33, 14 |
| Conread position: | 42-181 |
| Cow position: | chr20:8547289-8547156 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 109 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 117, 28 |
| Conread position: | 42-186 |
| Cow position: | chr20:7425969-7426111 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 115 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 32, 52 |
| Conread position: | 42-186 |
| Cow position: | chr20:35444877-35445017 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 43-186 |
| Cow position: | chr20:19834603-19834744 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 76, 32 |
| Conread position: | 44-183 |
| Cow position: | chr20:354671-354812 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 28, 66 |
| Conread position: | 57-181 |
| Cow position: | chr20:31746425-31746545 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 87-187 |
| Cow position: | chr20:21815747-21815646 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 85 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 20, 0 |
Show alignments to all cow chromosomes.