Cow genome map
| Conread name: | rnbm38b_e15.y1 |
| Conread position: | 2-167 |
| Cow position: | chr23:4090650-4090479 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 2-178 |
| Cow position: | chr23:30311701-30311869 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 17, 34 |
| Conread position: | 12-183 |
| Cow position: | chr23:1884954-1885124 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 126 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 61, 92 |
| Conread position: | 12-183 |
| Cow position: | chr23:35656628-35656456 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 60, 98 |
| Conread position: | 12-184 |
| Cow position: | chr23:15743310-15743138 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 62, 97 |
| Conread position: | 14-183 |
| Cow position: | chr23:9734636-9734457 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 60, 21 |
| Conread position: | 14-187 |
| Cow position: | chr23:27849208-27849041 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 15-183 |
| Cow position: | chr23:307674-307504 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 57, 95 |
| Conread position: | 16-169 |
| Cow position: | chr23:4844828-4844677 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 21, 81 |
| Conread position: | 16-173 |
| Cow position: | chr23:2563879-2563721 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 58, 94 |
| Conread position: | 16-176 |
| Cow position: | chr23:19565657-19565505 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 48, 16 |
| Conread position: | 16-183 |
| Cow position: | chr23:534440-534276 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 53, 19 |
| Conread position: | 16-185 |
| Cow position: | chr23:2359094-2358927 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 23, 89 |
| Conread position: | 16-186 |
| Cow position: | chr23:3967338-3967514 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 16-187 |
| Cow position: | chr23:1510713-1510882 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 52, 95 |
| Conread position: | 16-187 |
| Cow position: | chr23:5426652-5426478 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 57, 104 |
| Conread position: | 16-187 |
| Cow position: | chr23:7155487-7155648 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 133 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 59, 12 |
| Conread position: | 17-187 |
| Cow position: | chr23:2281977-2282137 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 129 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 18-181 |
| Cow position: | chr23:25990225-25990387 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 89, 57 |
| Conread position: | 18-185 |
| Cow position: | chr23:17486613-17486777 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 129 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 21, 86 |
| Conread position: | 19-175 |
| Cow position: | chr23:4505023-4504868 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 55, 16 |
| Conread position: | 19-187 |
| Cow position: | chr23:31494081-31493909 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 131 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 27, 44 |
| Conread position: | 20-187 |
| Cow position: | chr23:18874192-18874370 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 53, 125 |
| Conread position: | 21-183 |
| Cow position: | chr23:1480852-1480688 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 49, 89 |
| Conread position: | 22-183 |
| Cow position: | chr23:3835372-3835547 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 23-183 |
| Cow position: | chr23:17597630-17597475 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 51, 38 |
| Conread position: | 23-183 |
| Cow position: | chr23:18822224-18822387 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 51, 84 |
| Conread position: | 23-185 |
| Cow position: | chr23:1883603-1883442 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 130 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 11, 80 |
| Conread position: | 23-186 |
| Cow position: | chr23:3917662-3917819 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 50, 77 |
| Conread position: | 23-186 |
| Cow position: | chr23:16664191-16664356 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 130 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 16, 92 |
| Conread position: | 23-187 |
| Cow position: | chr23:343970-344142 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 51, 166 |
| Conread position: | 23-187 |
| Cow position: | chr23:5881308-5881473 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 20, 85 |
| Conread position: | 23-187 |
| Cow position: | chr23:20725483-20725643 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 126 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 52, 79 |
| Conread position: | 23-187 |
| Cow position: | chr23:20744372-20744548 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 11, 127 |
| Conread position: | 23-187 |
| Cow position: | chr23:26986062-26986226 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 11, 49 |
| Conread position: | 24-171 |
| Cow position: | chr23:12405614-12405760 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 57, 84 |
| Conread position: | 24-181 |
| Cow position: | chr23:41478083-41477929 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 120 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 50, 87 |
| Conread position: | 24-187 |
| Cow position: | chr23:21638580-21638421 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 52, 79 |
| Conread position: | 25-183 |
| Cow position: | chr23:7845494-7845342 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 25-183 |
| Cow position: | chr23:16780350-16780513 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 120 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 30-187 |
| Cow position: | chr23:5603546-5603701 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 44, 70 |
| Conread position: | 30-187 |
| Cow position: | chr23:40637465-40637303 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 51, 102 |
| Conread position: | 31-172 |
| Cow position: | chr23:2511345-2511205 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 42, 79 |
| Conread position: | 31-183 |
| Cow position: | chr23:32479817-32479969 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 43, 81 |
| Conread position: | 31-187 |
| Cow position: | chr23:1981473-1981617 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 119 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 31-187 |
| Cow position: | chr23:15056376-15056527 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 42, 78 |
| Conread position: | 32-182 |
| Cow position: | chr23:10844758-10844605 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 112 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 32-187 |
| Cow position: | chr23:385109-385264 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 42, 77 |
| Conread position: | 32-187 |
| Cow position: | chr23:22297831-22297994 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 123 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 35-171 |
| Cow position: | chr23:39202876-39203012 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 38, 73 |
| Conread position: | 35-176 |
| Cow position: | chr23:10497892-10497753 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 114 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 36, 62 |
| Conread position: | 35-181 |
| Cow position: | chr23:25968612-25968471 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 39, 65 |
| Conread position: | 35-183 |
| Cow position: | chr23:4291553-4291403 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 35, 75 |
| Conread position: | 35-183 |
| Cow position: | chr23:9726343-9726493 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 37, 75 |
| Conread position: | 35-183 |
| Cow position: | chr23:17012546-17012690 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 37, 60 |
| Conread position: | 35-183 |
| Cow position: | chr23:19179173-19179326 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 35-183 |
| Cow position: | chr23:25864498-25864648 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 37, 90 |
| Conread position: | 35-183 |
| Cow position: | chr23:33232504-33232653 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 35, 75 |
| Conread position: | 35-186 |
| Cow position: | chr23:5215716-5215871 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 36, 127 |
| Conread position: | 35-186 |
| Cow position: | chr23:8698621-8698466 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 35-186 |
| Cow position: | chr23:12363423-12363572 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 117 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 39, 62 |
| Conread position: | 35-186 |
| Cow position: | chr23:22238624-22238776 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 35-187 |
| Cow position: | chr23:204486-204325 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 19, 109 |
| Conread position: | 35-187 |
| Cow position: | chr23:1194299-1194447 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 119 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 33, 68 |
| Conread position: | 35-187 |
| Cow position: | chr23:1490550-1490405 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 19, 63 |
| Conread position: | 35-187 |
| Cow position: | chr23:2501661-2501809 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 38, 67 |
| Conread position: | 35-187 |
| Cow position: | chr23:3281914-3282077 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 123 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 35-187 |
| Cow position: | chr23:4338151-4338302 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 29, 69 |
| Conread position: | 35-187 |
| Cow position: | chr23:11053702-11053849 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 121 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 43, 64 |
| Conread position: | 35-187 |
| Cow position: | chr23:11212700-11212552 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 34, 68 |
| Conread position: | 35-187 |
| Cow position: | chr23:14524193-14524031 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 123 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 35-187 |
| Cow position: | chr23:16744739-16744591 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 120 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 37, 71 |
| Conread position: | 35-187 |
| Cow position: | chr23:22573710-22573864 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 38, 73 |
| Conread position: | 35-187 |
| Cow position: | chr23:24685436-24685289 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 39, 76 |
| Conread position: | 35-187 |
| Cow position: | chr23:24718607-24718757 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 39, 76 |
| Conread position: | 35-187 |
| Cow position: | chr23:24927022-24926859 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 34, 149 |
| Conread position: | 35-187 |
| Cow position: | chr23:28529755-28529910 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 37, 68 |
| Conread position: | 36-186 |
| Cow position: | chr23:23104295-23104442 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 119 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 38, 66 |
| Conread position: | 37-163 |
| Cow position: | chr23:2801237-2801361 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 104 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 36, 73 |
| Conread position: | 38-175 |
| Cow position: | chr23:28814572-28814433 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 36, 72 |
| Conread position: | 38-183 |
| Cow position: | chr23:799473-799620 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 109 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 35, 72 |
| Conread position: | 39-183 |
| Cow position: | chr23:18739269-18739415 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 108 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 33, 71 |
| Conread position: | 42-183 |
| Cow position: | chr23:36022603-36022740 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 27, 59 |
| Conread position: | 54-177 |
| Cow position: | chr23:6768086-6767960 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 102 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 19, 71 |
Show alignments to all cow chromosomes.