Cow genome map
| Conread name: | rnbm38b_e15.y1 |
| Conread position: | 2-184 |
| Cow position: | chr24:34390470-34390297 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 76, 31 |
| Conread position: | 3-183 |
| Cow position: | chr24:38006510-38006696 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 6-187 |
| Cow position: | chr24:5360910-5360734 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 138 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 22, 97 |
| Conread position: | 11-181 |
| Cow position: | chr24:33098278-33098449 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 17, 100 |
| Conread position: | 11-187 |
| Cow position: | chr24:29539737-29539912 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 63, 105 |
| Conread position: | 12-182 |
| Cow position: | chr24:38693684-38693856 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 126 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 16, 96 |
| Conread position: | 12-186 |
| Cow position: | chr24:25122527-25122360 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 62, 15 |
| Conread position: | 14-184 |
| Cow position: | chr24:3193081-3193252 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 58, 68 |
| Conread position: | 15-187 |
| Cow position: | chr24:22129456-22129620 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 127 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 15-187 |
| Cow position: | chr24:27348986-27349159 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 103, 92 |
| Conread position: | 16-164 |
| Cow position: | chr24:30325594-30325740 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 113 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 58, 87 |
| Conread position: | 17-183 |
| Cow position: | chr24:2380140-2379974 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 57, 18 |
| Conread position: | 17-187 |
| Cow position: | chr24:18302902-18302730 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 51, 92 |
| Conread position: | 18-175 |
| Cow position: | chr24:30313845-30313996 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 125 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 56, 16 |
| Conread position: | 18-178 |
| Cow position: | chr24:17104386-17104543 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 42, 49 |
| Conread position: | 21-167 |
| Cow position: | chr24:29524207-29524347 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 55, 80 |
| Conread position: | 21-183 |
| Cow position: | chr24:28553389-28553542 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 51, 46 |
| Conread position: | 23-175 |
| Cow position: | chr24:30176631-30176476 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 114 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 23-183 |
| Cow position: | chr24:3166000-3165840 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 120 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 50, 30 |
| Conread position: | 23-183 |
| Cow position: | chr24:5152707-5152545 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 118 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 49, 87 |
| Conread position: | 23-187 |
| Cow position: | chr24:27285005-27284834 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 24-187 |
| Cow position: | chr24:43028150-43028312 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 50, 12 |
| Conread position: | 26-178 |
| Cow position: | chr24:25884968-25885132 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 123 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 26-187 |
| Cow position: | chr24:17073088-17073240 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 48, 15 |
| Conread position: | 28-182 |
| Cow position: | chr24:33944583-33944424 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 30-187 |
| Cow position: | chr24:37650849-37650692 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 43, 68 |
| Conread position: | 31-161 |
| Cow position: | chr24:43011192-43011328 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 31-183 |
| Cow position: | chr24:15289000-15288849 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 45, 79 |
| Conread position: | 31-187 |
| Cow position: | chr24:24457069-24457232 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 121 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 76, 106 |
| Conread position: | 32-178 |
| Cow position: | chr24:358542-358391 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 42, 108 |
| Conread position: | 32-181 |
| Cow position: | chr24:34742921-34742777 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 32-182 |
| Cow position: | chr24:27553272-27553118 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 38, 132 |
| Conread position: | 32-187 |
| Cow position: | chr24:7757941-7757790 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 120 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 41, 71 |
| Conread position: | 32-187 |
| Cow position: | chr24:28496411-28496564 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 42, 13 |
| Conread position: | 32-187 |
| Cow position: | chr24:36286740-36286587 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 117 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 40, 78 |
| Conread position: | 32-187 |
| Cow position: | chr24:41406066-41405912 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 75, 29 |
| Conread position: | 33-183 |
| Cow position: | chr24:28255892-28256037 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 40, 76 |
| Conread position: | 35-172 |
| Cow position: | chr24:41925985-41925855 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 35-180 |
| Cow position: | chr24:24013934-24013784 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 115 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 35-181 |
| Cow position: | chr24:2992711-2992857 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 39, 68 |
| Conread position: | 35-181 |
| Cow position: | chr24:13948291-13948144 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 34, 80 |
| Conread position: | 35-182 |
| Cow position: | chr24:10499387-10499237 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 113 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 35-183 |
| Cow position: | chr24:18750879-18750729 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 113 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 37, 75 |
| Conread position: | 35-183 |
| Cow position: | chr24:34301868-34302017 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 112 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 37, 14 |
| Conread position: | 35-183 |
| Cow position: | chr24:39523281-39523427 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 35, 75 |
| Conread position: | 35-185 |
| Cow position: | chr24:18696051-18695895 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 35-186 |
| Cow position: | chr24:21656579-21656425 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 119 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 39, 84 |
| Conread position: | 35-187 |
| Cow position: | chr24:230449-230301 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 39, 59 |
| Conread position: | 35-187 |
| Cow position: | chr24:5142107-5141960 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 55, 64 |
| Conread position: | 35-187 |
| Cow position: | chr24:7275867-7275721 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 115 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 34, 77 |
| Conread position: | 35-187 |
| Cow position: | chr24:17311060-17311202 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 115 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 35-187 |
| Cow position: | chr24:18731939-18732084 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 35-187 |
| Cow position: | chr24:21834794-21834941 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 120 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 39, 66 |
| Conread position: | 35-187 |
| Cow position: | chr24:21887282-21887441 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 39, 54 |
| Conread position: | 35-187 |
| Cow position: | chr24:24091165-24091322 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 35-187 |
| Cow position: | chr24:28234210-28234060 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 31, 58 |
| Conread position: | 35-187 |
| Cow position: | chr24:29605864-29606015 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 117 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 72, 35 |
| Conread position: | 35-187 |
| Cow position: | chr24:30236041-30235888 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 39, 75 |
| Conread position: | 36-187 |
| Cow position: | chr24:37823692-37823545 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 38, 75 |
| Conread position: | 37-180 |
| Cow position: | chr24:6488371-6488233 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 37, 11 |
| Conread position: | 37-183 |
| Cow position: | chr24:27719363-27719505 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 115 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 37, 57 |
| Conread position: | 37-187 |
| Cow position: | chr24:24540325-24540473 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 120 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 29, 76 |
| Conread position: | 37-187 |
| Cow position: | chr24:28063117-28062966 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 119 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 40, 78 |
| Conread position: | 37-187 |
| Cow position: | chr24:37974816-37974963 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 120 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 29, 67 |
| Conread position: | 42-183 |
| Cow position: | chr24:18484831-18484972 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 31, 67 |
| Conread position: | 43-181 |
| Cow position: | chr24:44987211-44987351 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 105 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 29, 67 |
| Conread position: | 43-183 |
| Cow position: | chr24:31816736-31816600 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 29, 18 |
Show alignments to all cow chromosomes.