Cow genome map

Conread name: rnbm38b_e15.y1

Conread position: 1-176
Cow position: chr25:28939919-28940090 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 133
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 71, 27

Conread position: 12-176
Cow position: chr25:2415011-2414848 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 126
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 58, 91

Conread position: 12-181
Cow position: chr25:12195009-12195183 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 135
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 61, 16

Conread position: 12-183
Cow position: chr25:11857772-11857943 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 58, 90

Conread position: 15-177
Cow position: chr25:15999343-15999502 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 129
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 59, 17

Conread position: 16-183
Cow position: chr25:7684689-7684854 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 127
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 58, 87

Conread position: 16-183
Cow position: chr25:8410823-8410990 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 127
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 56, 76

Conread position: 16-183
Cow position: chr25:26679437-26679270 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 127
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 58, 100

Conread position: 16-187
Cow position: chr25:22348248-22348423 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 135
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 58, 0

Conread position: 16-187
Cow position: chr25:31657068-31657237 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 136
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 18, 87

Conread position: 16-187
Cow position: chr25:35762798-35762626 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 57, 94

Conread position: 19-172
Cow position: chr25:7441216-7441064 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 115
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 55, 78

Conread position: 19-181
Cow position: chr25:17141309-17141148 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 127
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 46, 16

Conread position: 19-187
Cow position: chr25:24115108-24115276 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 131
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 50, 94

Conread position: 20-187
Cow position: chr25:7673515-7673341 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 141
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 25, 93

Conread position: 20-187
Cow position: chr25:7799758-7799588 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 123
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 26, 153

Conread position: 21-178
Cow position: chr25:4504574-4504725 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 123
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 16, 54

Conread position: 21-178
Cow position: chr25:29903837-29903685 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 116
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 48, 14

Conread position: 21-180
Cow position: chr25:33550716-33550558 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 126
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 52, 95

Conread position: 21-183
Cow position: chr25:7380635-7380795 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 129
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 51, 14

Conread position: 21-187
Cow position: chr25:7217020-7216864 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 13, 0

Conread position: 21-187
Cow position: chr25:9269545-9269383 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 123
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 51, 81

Conread position: 21-187
Cow position: chr25:18288565-18288729 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 135
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 52, 82

Conread position: 23-181
Cow position: chr25:5922511-5922661 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 51, 56

Conread position: 23-183
Cow position: chr25:15305884-15305722 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 120
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 18, 81

Conread position: 23-183
Cow position: chr25:23769694-23769843 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 122
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 23-184
Cow position: chr25:17704944-17704787 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 125
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 16, 88

Conread position: 23-185
Cow position: chr25:33776263-33776097 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 128
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 48, 91

Conread position: 23-186
Cow position: chr25:11060338-11060173 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 126
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 45, 95

Conread position: 23-187
Cow position: chr25:1840524-1840364 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 126
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 51, 56

Conread position: 23-187
Cow position: chr25:7008123-7007952 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 128
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 51, 0

Conread position: 23-187
Cow position: chr25:23828927-23829089 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 130
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 46, 80

Conread position: 23-187
Cow position: chr25:28597401-28597570 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 133
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 51, 56

Conread position: 23-187
Cow position: chr25:36717115-36716956 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 125
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 49, 0

Conread position: 24-182
Cow position: chr25:36873135-36873288 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 123
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 44, 86

Conread position: 24-183
Cow position: chr25:11760258-11760409 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 124
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 44, 66

Conread position: 24-187
Cow position: chr25:3992982-3992819 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 122
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 45, 87

Conread position: 26-187
Cow position: chr25:13223098-13222940 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 132
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 9, 19

Conread position: 28-177
Cow position: chr25:16372751-16372603 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 44, 84

Conread position: 28-187
Cow position: chr25:26072365-26072521 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 125
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 46, 83

Conread position: 30-184
Cow position: chr25:17403672-17403522 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 118
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 43, 67

Conread position: 31-186
Cow position: chr25:10504140-10504300 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 119
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 43, 60

Conread position: 31-187
Cow position: chr25:4157052-4157206 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 125
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 43, 80

Conread position: 31-187
Cow position: chr25:18934441-18934595 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 43, 80

Conread position: 32-178
Cow position: chr25:15349715-15349858 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 41, 79

Conread position: 32-183
Cow position: chr25:11956998-11956848 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 114
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 40, 78

Conread position: 32-187
Cow position: chr25:9573941-9574093 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 125
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 39, 65

Conread position: 32-187
Cow position: chr25:13272763-13272609 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 121
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 42, 79

Conread position: 32-187
Cow position: chr25:22298826-22298677 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 121
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 37, 79

Conread position: 33-187
Cow position: chr25:18720934-18721080 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 122
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 41, 77

Conread position: 33-187
Cow position: chr25:19679545-19679395 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 122
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 41, 77

Conread position: 33-187
Cow position: chr25:20203101-20202953 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 120
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 41, 61

Conread position: 35-170
Cow position: chr25:26643003-26642864 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 110
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 35-171
Cow position: chr25:13470520-13470658 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 39, 78

Conread position: 35-173
Cow position: chr25:9025314-9025176 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 35, 65

Conread position: 35-178
Cow position: chr25:41150773-41150917 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 36, 75

Conread position: 35-183
Cow position: chr25:1823900-1824053 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 114
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 37, 0

Conread position: 35-186
Cow position: chr25:9989911-9990069 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 39, 0

Conread position: 35-186
Cow position: chr25:20785396-20785545 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 34, 81

Conread position: 35-186
Cow position: chr25:21082215-21082366 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 33, 75

Conread position: 35-186
Cow position: chr25:24573249-24573106 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 35-187
Cow position: chr25:3744543-3744705 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 126
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 39, 0

Conread position: 35-187
Cow position: chr25:4521650-4521801 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 120
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 38, 79

Conread position: 35-187
Cow position: chr25:7306481-7306332 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 117
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 39, 68

Conread position: 35-187
Cow position: chr25:11585720-11585558 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 124
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 39, 0

Conread position: 35-187
Cow position: chr25:12609534-12609380 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 118
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 78, 36

Conread position: 35-187
Cow position: chr25:24669261-24669404 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 123
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 35, 68

Conread position: 35-187
Cow position: chr25:26306012-26306164 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 39, 75

Conread position: 35-187
Cow position: chr25:36872864-36873016 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 117
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 39, 75

Conread position: 36-183
Cow position: chr25:1802801-1802655 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 38, 80

Conread position: 37-178
Cow position: chr25:30709156-30709299 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 107
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 32, 71

Conread position: 37-183
Cow position: chr25:18551144-18551290 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 111
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 37, 72

Conread position: 37-185
Cow position: chr25:20008323-20008175 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 35, 73

Conread position: 37-187
Cow position: chr25:22734195-22734048 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 38, 65

Conread position: 37-187
Cow position: chr25:28667861-28668006 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 111
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 67, 0

Conread position: 38-187
Cow position: chr25:13823531-13823679 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 32, 70

Conread position: 42-177
Cow position: chr25:35339006-35339139 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 107
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 32, 61

Conread position: 42-183
Cow position: chr25:13443223-13443366 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 32, 70

Conread position: 42-187
Cow position: chr25:14944944-14945088 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 117
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 30, 11

Conread position: 43-183
Cow position: chr25:36872546-36872402 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 31, 0

Conread position: 43-186
Cow position: chr25:6682867-6683021 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 120
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 38, 0

Conread position: 43-186
Cow position: chr25:22571142-22570999 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 29, 68

Conread position: 43-187
Cow position: chr25:23244821-23244962 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 115
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 31, 68

Conread position: 45-187
Cow position: chr25:14949630-14949770 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 31, 71

Conread position: 50-181
Cow position: chr25:6782036-6781908 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 107
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 21, 49

Conread position: 54-186
Cow position: chr25:15715041-15714914 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 38, 0

Conread position: 70-182
Cow position: chr25:15573542-15573433 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 90
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 37, 0

Show alignments to all cow chromosomes.