Cow genome map

Conread name: rnbm38b_e15.y1

Conread position: 1-183
Cow position: chr26:7524970-7525143 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 140
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 11, 63

Conread position: 3-181
Cow position: chr26:5168637-5168458 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 136
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 35, 110

Conread position: 4-183
Cow position: chr26:16585668-16585498 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 136
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 69, 90

Conread position: 6-183
Cow position: chr26:13802348-13802174 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 135
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 6, 98

Conread position: 7-186
Cow position: chr26:12144876-12145058 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 135
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 16, 108

Conread position: 7-186
Cow position: chr26:22892204-22892385 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 135
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 30, 102

Conread position: 11-154
Cow position: chr26:10752529-10752381 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 110
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 61, 0

Conread position: 12-182
Cow position: chr26:11874988-11875157 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 133
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 23, 100

Conread position: 12-183
Cow position: chr26:27482330-27482503 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 124
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 61, 98

Conread position: 12-186
Cow position: chr26:7687010-7687185 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 124
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 62, 98

Conread position: 12-187
Cow position: chr26:31062658-31062473 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 139
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 62, 41

Conread position: 13-187
Cow position: chr26:10700674-10700844 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 126
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 61, 9

Conread position: 14-183
Cow position: chr26:830044-829868 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 127
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 60, 103

Conread position: 15-179
Cow position: chr26:33114711-33114871 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 120
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 91, 0

Conread position: 16-181
Cow position: chr26:10219994-10220163 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 122
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 54, 105

Conread position: 16-183
Cow position: chr26:2930027-2930196 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 124
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 56, 21

Conread position: 16-185
Cow position: chr26:23106203-23106367 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 123
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 91, 45

Conread position: 18-183
Cow position: chr26:16795986-16796147 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 57, 0

Conread position: 22-183
Cow position: chr26:20846967-20846808 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 127
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 51, 80

Conread position: 22-183
Cow position: chr26:33038003-33038160 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 121
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 52, 81

Conread position: 22-187
Cow position: chr26:29900838-29901002 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 125
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 52, 78

Conread position: 23-180
Cow position: chr26:6823381-6823224 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 126
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 47, 81

Conread position: 23-183
Cow position: chr26:8187096-8186941 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 121
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 14, 56

Conread position: 23-183
Cow position: chr26:19591700-19591546 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 122
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 47, 80

Conread position: 23-186
Cow position: chr26:14175519-14175342 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 130
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 24-183
Cow position: chr26:17398796-17398639 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 116
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 47, 0

Conread position: 24-187
Cow position: chr26:12940628-12940459 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 131
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 50, 37

Conread position: 26-181
Cow position: chr26:28244050-28243894 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 116
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 46, 83

Conread position: 28-177
Cow position: chr26:32842567-32842718 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 113
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 44, 81

Conread position: 28-187
Cow position: chr26:28423502-28423345 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 127
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 46, 83

Conread position: 29-187
Cow position: chr26:22901037-22901206 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 125
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 30-183
Cow position: chr26:16435436-16435593 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 123
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 40, 23

Conread position: 31-171
Cow position: chr26:30127782-30127927 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 76, 0

Conread position: 31-181
Cow position: chr26:17057888-17057744 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 118
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 41, 66

Conread position: 31-183
Cow position: chr26:28251367-28251219 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 125
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 43, 78

Conread position: 31-184
Cow position: chr26:2994486-2994637 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 119
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 39, 66

Conread position: 32-179
Cow position: chr26:4584999-4585146 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 113
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 42, 84

Conread position: 32-182
Cow position: chr26:13022675-13022527 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 118
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 41, 84

Conread position: 32-187
Cow position: chr26:13705556-13705718 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 122
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 42, 110

Conread position: 32-187
Cow position: chr26:31779758-31779607 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 119
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 75, 29

Conread position: 32-187
Cow position: chr26:34559959-34560112 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 121
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 41, 62

Conread position: 33-183
Cow position: chr26:20770062-20769914 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 121
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 41, 64

Conread position: 35-177
Cow position: chr26:32831367-32831513 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 73, 0

Conread position: 35-178
Cow position: chr26:13292883-13292739 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 105
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 35-178
Cow position: chr26:22798944-22799088 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 39, 68

Conread position: 35-180
Cow position: chr26:19636499-19636360 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 116
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 26, 0

Conread position: 35-181
Cow position: chr26:12891762-12891906 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 115
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 22, 77

Conread position: 35-182
Cow position: chr26:23096983-23097130 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 39, 75

Conread position: 35-183
Cow position: chr26:6714089-6714239 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 37, 74

Conread position: 35-183
Cow position: chr26:9535723-9535581 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 119
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 39, 68

Conread position: 35-183
Cow position: chr26:15132850-15132700 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 121
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 38, 75

Conread position: 35-183
Cow position: chr26:21320155-21320009 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 119
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 38, 67

Conread position: 35-183
Cow position: chr26:26244959-26245107 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 37, 82

Conread position: 35-183
Cow position: chr26:34060545-34060396 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 37, 70

Conread position: 35-184
Cow position: chr26:31888939-31888794 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 39, 66

Conread position: 35-186
Cow position: chr26:31137256-31137407 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 121
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 23, 76

Conread position: 35-186
Cow position: chr26:33201861-33202010 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 123
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 39, 75

Conread position: 35-187
Cow position: chr26:647513-647667 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 123
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 39, 67

Conread position: 35-187
Cow position: chr26:13862829-13862978 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 123
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 39, 76

Conread position: 35-187
Cow position: chr26:18825074-18825224 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 120
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 34, 62

Conread position: 35-187
Cow position: chr26:20291483-20291633 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 125
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 39, 76

Conread position: 36-164
Cow position: chr26:33891451-33891322 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 101
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 38, 73

Conread position: 37-183
Cow position: chr26:10502932-10502792 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 108, 26

Conread position: 37-187
Cow position: chr26:7314836-7314681 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 116
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 32, 0

Conread position: 39-187
Cow position: chr26:29889309-29889455 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 28, 56

Conread position: 40-187
Cow position: chr26:24240889-24240738 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 123
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 7, 24

Conread position: 41-187
Cow position: chr26:27491292-27491442 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 113
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 33, 0

Conread position: 42-182
Cow position: chr26:7085558-7085697 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 30, 75

Conread position: 42-183
Cow position: chr26:5836615-5836757 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 109
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 27, 70

Conread position: 80-187
Cow position: chr26:31605577-31605465 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 27, 0

Show alignments to all cow chromosomes.