Cow genome map
| Conread name: | rnbm38b_e15.y1 |
| Conread position: | 1-183 |
| Cow position: | chr27:26323171-26323359 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 7-187 |
| Cow position: | chr27:7412131-7412307 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 5, 30 |
| Conread position: | 9-186 |
| Cow position: | chr27:6106444-6106617 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 11-187 |
| Cow position: | chr27:22220289-22220468 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 58, 104 |
| Conread position: | 12-178 |
| Cow position: | chr27:27020357-27020192 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 20, 58 |
| Conread position: | 14-178 |
| Cow position: | chr27:23594061-23594227 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 59, 96 |
| Conread position: | 15-180 |
| Cow position: | chr27:16965316-16965484 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 17, 81 |
| Conread position: | 15-183 |
| Cow position: | chr27:26121499-26121670 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 21, 103 |
| Conread position: | 16-163 |
| Cow position: | chr27:23510720-23510873 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 59, 12 |
| Conread position: | 16-175 |
| Cow position: | chr27:19991893-19992051 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 56, 76 |
| Conread position: | 16-179 |
| Cow position: | chr27:1184429-1184271 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 56, 40 |
| Conread position: | 16-182 |
| Cow position: | chr27:19546777-19546602 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 16-183 |
| Cow position: | chr27:25000221-25000050 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 56, 18 |
| Conread position: | 16-185 |
| Cow position: | chr27:26317810-26317978 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 16-187 |
| Cow position: | chr27:4944761-4944600 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 56, 12 |
| Conread position: | 20-187 |
| Cow position: | chr27:12459034-12459203 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 14, 82 |
| Conread position: | 22-178 |
| Cow position: | chr27:19576573-19576418 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 32, 90 |
| Conread position: | 22-182 |
| Cow position: | chr27:7425438-7425279 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 46, 89 |
| Conread position: | 22-187 |
| Cow position: | chr27:591019-590848 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 128 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 23-187 |
| Cow position: | chr27:19387772-19387933 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 52, 38 |
| Conread position: | 23-187 |
| Cow position: | chr27:29593878-29593714 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 18, 83 |
| Conread position: | 24-183 |
| Cow position: | chr27:30884780-30884938 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 22, 54 |
| Conread position: | 25-185 |
| Cow position: | chr27:21951227-21951066 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 49, 85 |
| Conread position: | 26-181 |
| Cow position: | chr27:24240106-24240268 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 43, 35 |
| Conread position: | 26-187 |
| Cow position: | chr27:17102653-17102810 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 11, 74 |
| Conread position: | 28-187 |
| Cow position: | chr27:27632837-27632687 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 54, 72 |
| Conread position: | 31-183 |
| Cow position: | chr27:16705012-16705161 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 119 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 41, 68 |
| Conread position: | 32-183 |
| Cow position: | chr27:20897260-20897111 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 39, 70 |
| Conread position: | 32-187 |
| Cow position: | chr27:11528689-11528845 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 42, 65 |
| Conread position: | 33-187 |
| Cow position: | chr27:31153794-31153643 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 127, 73 |
| Conread position: | 35-167 |
| Cow position: | chr27:23527736-23527607 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 109 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 39, 76 |
| Conread position: | 35-169 |
| Cow position: | chr27:24952189-24952058 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 108 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 40, 32 |
| Conread position: | 35-172 |
| Cow position: | chr27:23994652-23994512 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 108 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 34, 125 |
| Conread position: | 35-177 |
| Cow position: | chr27:3698910-3698768 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 35, 62 |
| Conread position: | 35-181 |
| Cow position: | chr27:27389264-27389115 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 112 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 39, 83 |
| Conread position: | 35-183 |
| Cow position: | chr27:16088554-16088714 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 39, 117 |
| Conread position: | 35-183 |
| Cow position: | chr27:16103574-16103721 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 39, 73 |
| Conread position: | 35-183 |
| Cow position: | chr27:19508775-19508923 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 114 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 51, 41 |
| Conread position: | 35-183 |
| Cow position: | chr27:22602938-22603096 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 35-183 |
| Cow position: | chr27:24223718-24223862 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 112 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 35-184 |
| Cow position: | chr27:15434096-15434236 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 35-187 |
| Cow position: | chr27:178626-178777 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 39, 76 |
| Conread position: | 35-187 |
| Cow position: | chr27:426733-426884 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 35, 68 |
| Conread position: | 35-187 |
| Cow position: | chr27:11133851-11134001 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 120 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 38, 76 |
| Conread position: | 35-187 |
| Cow position: | chr27:15453976-15454125 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 29, 75 |
| Conread position: | 35-187 |
| Cow position: | chr27:17397688-17397540 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 39, 68 |
| Conread position: | 35-187 |
| Cow position: | chr27:19717661-19717829 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 35-187 |
| Cow position: | chr27:22171065-22171214 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 39, 59 |
| Conread position: | 35-187 |
| Cow position: | chr27:22748091-22748242 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 32, 67 |
| Conread position: | 35-187 |
| Cow position: | chr27:23452226-23452376 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 119 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 33, 61 |
| Conread position: | 35-187 |
| Cow position: | chr27:23484979-23485126 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 39, 26 |
| Conread position: | 35-187 |
| Cow position: | chr27:31210313-31210462 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 39, 79 |
| Conread position: | 36-187 |
| Cow position: | chr27:27450119-27449971 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 38, 60 |
| Conread position: | 37-181 |
| Cow position: | chr27:15669009-15668863 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 113 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 34, 88 |
| Conread position: | 37-183 |
| Cow position: | chr27:19452764-19452912 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 113 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 35, 87 |
| Conread position: | 37-187 |
| Cow position: | chr27:1067341-1067482 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 37-187 |
| Cow position: | chr27:8630108-8629956 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 37, 72 |
| Conread position: | 37-187 |
| Cow position: | chr27:10581299-10581447 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 36, 73 |
| Conread position: | 37-187 |
| Cow position: | chr27:30407282-30407123 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 31, 105 |
| Conread position: | 42-178 |
| Cow position: | chr27:22150923-22150789 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 32, 69 |
| Conread position: | 42-183 |
| Cow position: | chr27:23177542-23177402 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 28, 61 |
| Conread position: | 42-187 |
| Cow position: | chr27:6319693-6319833 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 29, 55 |
| Conread position: | 42-187 |
| Cow position: | chr27:23560259-23560117 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 32, 61 |
| Conread position: | 42-187 |
| Cow position: | chr27:30489658-30489496 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 43-187 |
| Cow position: | chr27:29183455-29183302 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 119 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 44-181 |
| Cow position: | chr27:19660700-19660840 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 107 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 28, 76 |
| Conread position: | 45-187 |
| Cow position: | chr27:31183344-31183490 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 46-183 |
| Cow position: | chr27:1768843-1768713 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 46-187 |
| Cow position: | chr27:26238798-26238939 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 27, 72 |
| Conread position: | 70-187 |
| Cow position: | chr27:26506544-26506659 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 94 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 26, 0 |
Show alignments to all cow chromosomes.