Cow genome map
| Conread name: | rnbm38b_e15.y1 |
| Conread position: | 2-187 |
| Cow position: | chr28:4016754-4016578 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 3-183 |
| Cow position: | chr28:4163350-4163532 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 71, 114 |
| Conread position: | 4-187 |
| Cow position: | chr28:2435806-2435985 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 37, 77 |
| Conread position: | 5-187 |
| Cow position: | chr28:8396555-8396382 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 29, 46 |
| Conread position: | 13-182 |
| Cow position: | chr28:18770311-18770132 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 13-183 |
| Cow position: | chr28:5630319-5630149 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 59, 96 |
| Conread position: | 13-187 |
| Cow position: | chr28:4877212-4877384 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 99, 57 |
| Conread position: | 14-183 |
| Cow position: | chr28:6301303-6301132 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 58, 96 |
| Conread position: | 14-183 |
| Cow position: | chr28:6563675-6563846 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 58, 96 |
| Conread position: | 15-182 |
| Cow position: | chr28:32015005-32014836 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 17, 90 |
| Conread position: | 15-187 |
| Cow position: | chr28:28501458-28501278 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 59, 20 |
| Conread position: | 16-176 |
| Cow position: | chr28:3257207-3257046 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 53, 102 |
| Conread position: | 16-178 |
| Cow position: | chr28:7750804-7750960 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 54, 81 |
| Conread position: | 16-183 |
| Cow position: | chr28:4307676-4307846 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 56, 101 |
| Conread position: | 16-183 |
| Cow position: | chr28:8936365-8936201 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 58, 95 |
| Conread position: | 16-187 |
| Cow position: | chr28:3492569-3492737 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 10, 87 |
| Conread position: | 16-187 |
| Cow position: | chr28:4866361-4866526 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 58, 81 |
| Conread position: | 16-187 |
| Cow position: | chr28:9705872-9705697 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 56, 19 |
| Conread position: | 16-187 |
| Cow position: | chr28:21868674-21868504 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 58, 87 |
| Conread position: | 16-187 |
| Cow position: | chr28:24966602-24966433 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 53, 12 |
| Conread position: | 16-187 |
| Cow position: | chr28:29988892-29989063 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 128 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 32, 12 |
| Conread position: | 17-183 |
| Cow position: | chr28:3725992-3726158 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 51, 94 |
| Conread position: | 17-183 |
| Cow position: | chr28:5805880-5805718 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 17, 68 |
| Conread position: | 17-187 |
| Cow position: | chr28:8787757-8787587 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 17, 96 |
| Conread position: | 18-183 |
| Cow position: | chr28:19221922-19222100 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 134 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 18-187 |
| Cow position: | chr28:22500293-22500451 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 41, 16 |
| Conread position: | 20-187 |
| Cow position: | chr28:13474510-13474347 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 53, 14 |
| Conread position: | 21-187 |
| Cow position: | chr28:4834632-4834797 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 53, 15 |
| Conread position: | 22-183 |
| Cow position: | chr28:4182212-4182052 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 47, 66 |
| Conread position: | 23-179 |
| Cow position: | chr28:22182923-22183086 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 124 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 23-180 |
| Cow position: | chr28:4884042-4884199 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 14, 87 |
| Conread position: | 23-182 |
| Cow position: | chr28:11527046-11527207 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 11, 77 |
| Conread position: | 23-183 |
| Cow position: | chr28:10615738-10615895 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 11, 86 |
| Conread position: | 23-183 |
| Cow position: | chr28:11828748-11828911 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 14, 88 |
| Conread position: | 23-187 |
| Cow position: | chr28:4013293-4013131 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 136 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 51, 80 |
| Conread position: | 23-187 |
| Cow position: | chr28:4876650-4876489 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 11, 80 |
| Conread position: | 23-187 |
| Cow position: | chr28:5577742-5577576 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 23-187 |
| Cow position: | chr28:26960703-26960862 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 50, 80 |
| Conread position: | 24-183 |
| Cow position: | chr28:6059262-6059419 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 84, 37 |
| Conread position: | 24-183 |
| Cow position: | chr28:9070094-9069939 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 50, 72 |
| Conread position: | 25-177 |
| Cow position: | chr28:22278417-22278575 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 25-183 |
| Cow position: | chr28:24082478-24082321 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 49, 85 |
| Conread position: | 25-187 |
| Cow position: | chr28:2151232-2151393 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 44, 91 |
| Conread position: | 30-183 |
| Cow position: | chr28:19038815-19038968 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 121 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 45, 80 |
| Conread position: | 32-177 |
| Cow position: | chr28:16918973-16919112 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 42, 62 |
| Conread position: | 32-187 |
| Cow position: | chr28:777877-777722 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 121 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 42, 79 |
| Conread position: | 32-187 |
| Cow position: | chr28:8681236-8681383 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 126 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 42, 65 |
| Conread position: | 32-187 |
| Cow position: | chr28:16369888-16370036 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 120 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 34-187 |
| Cow position: | chr28:11305436-11305586 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 40, 69 |
| Conread position: | 35-180 |
| Cow position: | chr28:9285179-9285323 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 39, 59 |
| Conread position: | 35-181 |
| Cow position: | chr28:11743630-11743770 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 35, 74 |
| Conread position: | 35-183 |
| Cow position: | chr28:3011069-3011220 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 37, 74 |
| Conread position: | 35-183 |
| Cow position: | chr28:3678557-3678413 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 117 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 39, 74 |
| Conread position: | 35-183 |
| Cow position: | chr28:4077139-4077295 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 35-183 |
| Cow position: | chr28:4159162-4159006 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 35-183 |
| Cow position: | chr28:5204383-5204246 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 35-183 |
| Cow position: | chr28:16200542-16200692 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 113 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 37, 75 |
| Conread position: | 35-183 |
| Cow position: | chr28:16570002-16569856 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 37, 74 |
| Conread position: | 35-183 |
| Cow position: | chr28:21845149-21845008 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 35-183 |
| Cow position: | chr28:24238286-24238426 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 33, 59 |
| Conread position: | 35-183 |
| Cow position: | chr28:30902319-30902177 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 40, 74 |
| Conread position: | 35-186 |
| Cow position: | chr28:9636259-9636409 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 122 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 31, 63 |
| Conread position: | 35-187 |
| Cow position: | chr28:3759195-3759037 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 35-187 |
| Cow position: | chr28:5436888-5437038 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 37, 80 |
| Conread position: | 35-187 |
| Cow position: | chr28:9109409-9109263 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 36, 60 |
| Conread position: | 35-187 |
| Cow position: | chr28:10763086-10762941 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 35, 65 |
| Conread position: | 35-187 |
| Cow position: | chr28:11422621-11422769 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 113 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 35-187 |
| Cow position: | chr28:17740023-17739869 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 39, 75 |
| Conread position: | 35-187 |
| Cow position: | chr28:20759495-20759654 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 38, 138 |
| Conread position: | 35-187 |
| Cow position: | chr28:24996420-24996566 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 33, 63 |
| Conread position: | 35-187 |
| Cow position: | chr28:29500605-29500447 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 36-187 |
| Cow position: | chr28:7350847-7350701 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 17, 33 |
| Conread position: | 37-182 |
| Cow position: | chr28:17948921-17949061 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 39, 62 |
| Conread position: | 37-187 |
| Cow position: | chr28:5255067-5254921 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 37, 66 |
| Conread position: | 39-180 |
| Cow position: | chr28:7131897-7132034 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 113 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 35, 73 |
| Conread position: | 39-186 |
| Cow position: | chr28:14998258-14998115 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 109 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 41-183 |
| Cow position: | chr28:26743823-26743677 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 41-187 |
| Cow position: | chr28:7557538-7557687 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 32, 67 |
| Conread position: | 42-178 |
| Cow position: | chr28:3311030-3311168 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 28, 68 |
| Conread position: | 42-187 |
| Cow position: | chr28:4046035-4045891 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 32, 55 |
| Conread position: | 42-187 |
| Cow position: | chr28:16879759-16879620 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 28, 67 |
| Conread position: | 43-182 |
| Cow position: | chr28:4588504-4588370 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 113 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 25, 5 |
| Conread position: | 43-183 |
| Cow position: | chr28:4100574-4100708 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 45-187 |
| Cow position: | chr28:12430795-12430652 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 29, 65 |
| Conread position: | 47-183 |
| Cow position: | chr28:657279-657424 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 113 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 19, 0 |
Show alignments to all cow chromosomes.