Cow genome map
| Conread name: | rnbm38b_e15.y1 |
| Conread position: | 5-180 |
| Cow position: | chr29:33143135-33143307 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 68, 32 |
| Conread position: | 6-183 |
| Cow position: | chr29:22776298-22776123 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 21, 97 |
| Conread position: | 10-187 |
| Cow position: | chr29:25737202-25737374 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 12-183 |
| Cow position: | chr29:41531066-41530894 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 62, 97 |
| Conread position: | 13-183 |
| Cow position: | chr29:396621-396450 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 135 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 22, 102 |
| Conread position: | 14-145 |
| Cow position: | chr29:34919249-34919377 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 99 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 14-187 |
| Cow position: | chr29:25092316-25092146 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 54, 21 |
| Conread position: | 15-174 |
| Cow position: | chr29:1011376-1011536 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 21, 93 |
| Conread position: | 16-178 |
| Cow position: | chr29:36210361-36210189 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 47, 130 |
| Conread position: | 16-181 |
| Cow position: | chr29:14577066-14576905 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 57, 20 |
| Conread position: | 16-183 |
| Cow position: | chr29:19949515-19949351 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 58, 12 |
| Conread position: | 16-185 |
| Cow position: | chr29:9378846-9378679 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 58, 95 |
| Conread position: | 16-187 |
| Cow position: | chr29:4070830-4070664 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 57, 20 |
| Conread position: | 16-187 |
| Cow position: | chr29:22028750-22028915 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 55, 81 |
| Conread position: | 16-187 |
| Cow position: | chr29:22729776-22729607 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 53, 94 |
| Conread position: | 16-187 |
| Cow position: | chr29:28949196-28949013 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 19-183 |
| Cow position: | chr29:43088513-43088352 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 123 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 54, 16 |
| Conread position: | 22-178 |
| Cow position: | chr29:37990782-37990950 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 22-181 |
| Cow position: | chr29:936410-936253 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 12, 90 |
| Conread position: | 22-183 |
| Cow position: | chr29:13028655-13028484 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 22-187 |
| Cow position: | chr29:28066689-28066527 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 13, 68 |
| Conread position: | 23-181 |
| Cow position: | chr29:25432658-25432499 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 49, 86 |
| Conread position: | 23-183 |
| Cow position: | chr29:24660881-24660729 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 51, 80 |
| Conread position: | 23-187 |
| Cow position: | chr29:22335020-22335189 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 24-185 |
| Cow position: | chr29:9310806-9310642 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 37, 94 |
| Conread position: | 24-187 |
| Cow position: | chr29:27042473-27042312 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 48, 16 |
| Conread position: | 24-187 |
| Cow position: | chr29:28840376-28840196 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 26-183 |
| Cow position: | chr29:8634853-8634698 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 46, 56 |
| Conread position: | 26-183 |
| Cow position: | chr29:41422708-41422867 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 46, 83 |
| Conread position: | 26-187 |
| Cow position: | chr29:15796685-15796525 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 81, 88 |
| Conread position: | 28-183 |
| Cow position: | chr29:17663559-17663717 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 31-183 |
| Cow position: | chr29:34359628-34359777 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 121 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 12, 74 |
| Conread position: | 31-187 |
| Cow position: | chr29:31929182-31929029 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 43, 60 |
| Conread position: | 32-154 |
| Cow position: | chr29:659476-659355 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 100 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 41, 78 |
| Conread position: | 32-186 |
| Cow position: | chr29:19762458-19762309 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 117 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 32-186 |
| Cow position: | chr29:26540345-26540499 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 41, 79 |
| Conread position: | 32-187 |
| Cow position: | chr29:19363903-19363750 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 42, 84 |
| Conread position: | 32-187 |
| Cow position: | chr29:36697952-36697797 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 75, 38 |
| Conread position: | 34-183 |
| Cow position: | chr29:501394-501241 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 35-173 |
| Cow position: | chr29:10839131-10838995 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 112 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 37, 75 |
| Conread position: | 35-181 |
| Cow position: | chr29:15947361-15947213 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 111 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 37, 75 |
| Conread position: | 35-182 |
| Cow position: | chr29:21645509-21645357 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 39, 136 |
| Conread position: | 35-183 |
| Cow position: | chr29:4441013-4441160 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 33, 75 |
| Conread position: | 35-183 |
| Cow position: | chr29:7040676-7040828 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 37, 59 |
| Conread position: | 35-183 |
| Cow position: | chr29:32799511-32799668 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 35-183 |
| Cow position: | chr29:36357320-36357170 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 39, 75 |
| Conread position: | 35-183 |
| Cow position: | chr29:37618500-37618350 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 37, 75 |
| Conread position: | 35-185 |
| Cow position: | chr29:629729-629580 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 72, 33 |
| Conread position: | 35-186 |
| Cow position: | chr29:12680350-12680197 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 39, 95 |
| Conread position: | 35-187 |
| Cow position: | chr29:5893038-5892885 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 83, 75 |
| Conread position: | 35-187 |
| Cow position: | chr29:7414686-7414541 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 120 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 143, 18 |
| Conread position: | 35-187 |
| Cow position: | chr29:9709885-9709735 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 38, 62 |
| Conread position: | 35-187 |
| Cow position: | chr29:17110145-17109997 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 22, 74 |
| Conread position: | 35-187 |
| Cow position: | chr29:18605476-18605620 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 35-187 |
| Cow position: | chr29:32215896-32215748 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 114 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 39, 66 |
| Conread position: | 35-187 |
| Cow position: | chr29:36781118-36781264 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 38, 74 |
| Conread position: | 35-187 |
| Cow position: | chr29:40350889-40351036 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 36, 79 |
| Conread position: | 36-187 |
| Cow position: | chr29:10818269-10818410 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 117 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 36-187 |
| Cow position: | chr29:22734915-22735068 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 46, 18 |
| Conread position: | 37-187 |
| Cow position: | chr29:15798141-15797992 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 113 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 70, 77 |
| Conread position: | 37-187 |
| Cow position: | chr29:19125520-19125362 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 37-187 |
| Cow position: | chr29:20770534-20770384 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 116 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 31, 50 |
| Conread position: | 37-187 |
| Cow position: | chr29:22032456-22032602 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 126, 26 |
| Conread position: | 37-187 |
| Cow position: | chr29:25288729-25288883 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 122 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 37, 137 |
| Conread position: | 39-183 |
| Cow position: | chr29:17297326-17297180 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 33, 71 |
| Conread position: | 42-177 |
| Cow position: | chr29:7143484-7143345 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 107 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 42-187 |
| Cow position: | chr29:29324235-29324383 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 32, 129 |
| Conread position: | 43-186 |
| Cow position: | chr29:30548957-30548817 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 108 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 44-184 |
| Cow position: | chr29:33393871-33393721 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 114 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 46-187 |
| Cow position: | chr29:22723777-22723641 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 110 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 46-187 |
| Cow position: | chr29:23825031-23825170 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 28, 64 |
| Conread position: | 48-183 |
| Cow position: | chr29:8798830-8798971 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 107 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 71-183 |
| Cow position: | chr29:1325591-1325483 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 92 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 94-187 |
| Cow position: | chr29:17022284-17022190 (view UCSC Genome Browser custom track) |
| Alignm length: | 95 |
| Alignm identity: | 82 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 13, 0 |
Show alignments to all cow chromosomes.