Cow genome map

Conread name: rnbm38b_e15.y1

Conread position: 1-183
Cow position: chr6:57089471-57089289 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 136
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 36, 10

Conread position: 1-187
Cow position: chr6:61110054-61109869 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 143
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 25, 9

Conread position: 4-178
Cow position: chr6:48436094-48435921 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 125
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 67, 103

Conread position: 6-184
Cow position: chr6:59297307-59297137 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 134
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 66, 104

Conread position: 9-185
Cow position: chr6:38020936-38020757 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 129
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 50, 67

Conread position: 13-183
Cow position: chr6:6060321-6060486 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 125
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 50, 21

Conread position: 13-183
Cow position: chr6:16411868-16411696 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 121
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 59, 97

Conread position: 13-187
Cow position: chr6:38033117-38032939 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 136
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 10, 107

Conread position: 14-187
Cow position: chr6:38207230-38207408 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 136
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 5, 121

Conread position: 15-154
Cow position: chr6:29775867-29775726 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 114
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 59, 17

Conread position: 15-181
Cow position: chr6:23696245-23696088 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 127
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 19, 0

Conread position: 15-187
Cow position: chr6:15243510-15243337 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 125
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 92, 21

Conread position: 16-146
Cow position: chr6:38615380-38615249 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 108
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 5, 45

Conread position: 16-179
Cow position: chr6:22876674-22876841 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 124
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 16, 96

Conread position: 16-180
Cow position: chr6:16102940-16103108 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 125
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 23, 19

Conread position: 16-181
Cow position: chr6:21004931-21004764 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 121
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 56, 12

Conread position: 16-182
Cow position: chr6:55548280-55548447 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 123
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 20, 95

Conread position: 16-183
Cow position: chr6:19446506-19446335 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 130
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 8, 96

Conread position: 16-183
Cow position: chr6:49686074-49685903 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 18, 96

Conread position: 16-183
Cow position: chr6:53711656-53711488 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 124
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 21, 95

Conread position: 16-185
Cow position: chr6:44543895-44544065 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 122
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 56, 94

Conread position: 16-187
Cow position: chr6:19264250-19264417 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 125
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 19, 0

Conread position: 21-152
Cow position: chr6:60674076-60673951 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 108
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 52, 13

Conread position: 22-178
Cow position: chr6:67574636-67574478 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 115
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 50, 87

Conread position: 22-181
Cow position: chr6:36643241-36643405 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 122
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 83, 130

Conread position: 22-187
Cow position: chr6:12761526-12761361 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 128
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 47, 90

Conread position: 23-159
Cow position: chr6:36846372-36846506 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 110
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 14, 75

Conread position: 23-177
Cow position: chr6:66058464-66058616 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 120
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 51, 79

Conread position: 23-183
Cow position: chr6:55282047-55282208 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 126
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 50, 29

Conread position: 23-186
Cow position: chr6:18903792-18903969 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 133
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 51, 0

Conread position: 23-187
Cow position: chr6:154717-154551 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 135
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 73, 48

Conread position: 23-187
Cow position: chr6:54406555-54406718 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 136
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 20, 36

Conread position: 24-184
Cow position: chr6:32268643-32268803 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 122
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 48, 85

Conread position: 24-187
Cow position: chr6:4699949-4699789 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 122
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 50, 78

Conread position: 24-187
Cow position: chr6:21350787-21350951 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 130
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 50, 87

Conread position: 25-187
Cow position: chr6:38853412-38853577 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 127
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 12, 86

Conread position: 28-187
Cow position: chr6:8726917-8726759 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 126
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 46, 88

Conread position: 28-187
Cow position: chr6:21083301-21083459 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 120
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 46, 74

Conread position: 31-183
Cow position: chr6:2585177-2585028 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 41, 11

Conread position: 31-183
Cow position: chr6:36939111-36938953 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 43, 0

Conread position: 31-183
Cow position: chr6:47520291-47520139 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 115
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 43, 87

Conread position: 31-184
Cow position: chr6:22215225-22215386 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 121
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 39, 0

Conread position: 32-183
Cow position: chr6:15243075-15242922 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 123
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 42, 78

Conread position: 32-183
Cow position: chr6:48278659-48278803 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 62, 0

Conread position: 32-185
Cow position: chr6:25614854-25615007 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 126
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 42, 84

Conread position: 32-186
Cow position: chr6:36570702-36570542 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 42, 0

Conread position: 32-187
Cow position: chr6:39358107-39358259 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 123
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 41, 77

Conread position: 32-187
Cow position: chr6:46282756-46282922 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 126
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 41, 0

Conread position: 32-187
Cow position: chr6:53546265-53546117 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 118
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 42, 47

Conread position: 35-171
Cow position: chr6:57320365-57320500 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 109
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 34, 67

Conread position: 35-177
Cow position: chr6:11262974-11262838 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 114
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 39, 60

Conread position: 35-178
Cow position: chr6:21346920-21347060 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 118
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 36, 67

Conread position: 35-182
Cow position: chr6:10225417-10225569 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 114
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 37, 94

Conread position: 35-183
Cow position: chr6:143145-143289 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 39, 68

Conread position: 35-183
Cow position: chr6:15937619-15937769 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 39, 82

Conread position: 35-183
Cow position: chr6:16091130-16090989 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 119
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 38, 62

Conread position: 35-183
Cow position: chr6:21535273-21535125 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 39, 68

Conread position: 35-183
Cow position: chr6:32006223-32006369 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 120
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 39, 68

Conread position: 35-183
Cow position: chr6:32866988-32867132 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 119
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 39, 50

Conread position: 35-183
Cow position: chr6:42035003-42034858 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 118
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 36, 76

Conread position: 35-183
Cow position: chr6:51529957-51530102 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 108
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 35-183
Cow position: chr6:58725600-58725455 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 34, 67

Conread position: 35-185
Cow position: chr6:34569649-34569491 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 119
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 37, 108

Conread position: 35-185
Cow position: chr6:47356059-47355907 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 112
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 39, 137

Conread position: 35-186
Cow position: chr6:3937020-3936865 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 130
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 40, 0

Conread position: 35-186
Cow position: chr6:44194323-44194466 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 57, 0

Conread position: 35-186
Cow position: chr6:67451139-67451288 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 111
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 19, 0

Conread position: 35-187
Cow position: chr6:7128171-7128321 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 116
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 38, 65

Conread position: 35-187
Cow position: chr6:7291544-7291397 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 121
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 39, 62

Conread position: 35-187
Cow position: chr6:24468166-24468314 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 124
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 39, 68

Conread position: 35-187
Cow position: chr6:25772986-25773137 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 116
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 38, 57

Conread position: 35-187
Cow position: chr6:34423227-34423377 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 127
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 39, 68

Conread position: 35-187
Cow position: chr6:35341954-35342098 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 35-187
Cow position: chr6:35743213-35743060 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 114
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 72, 54

Conread position: 35-187
Cow position: chr6:50504689-50504538 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 39, 62

Conread position: 35-187
Cow position: chr6:50577748-50577602 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 113
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 65, 0

Conread position: 35-187
Cow position: chr6:52478178-52478329 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 34, 76

Conread position: 35-187
Cow position: chr6:59602982-59603126 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 121
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 39, 59

Conread position: 35-187
Cow position: chr6:60143966-60144116 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 39, 75

Conread position: 35-187
Cow position: chr6:60186418-60186581 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 127
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 14, 0

Conread position: 36-183
Cow position: chr6:53811818-53811668 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 109
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 36-183
Cow position: chr6:57545997-57546143 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 74, 0

Conread position: 37-178
Cow position: chr6:29485314-29485174 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 38, 75

Conread position: 37-187
Cow position: chr6:1941603-1941751 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 125
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 35, 72

Conread position: 37-187
Cow position: chr6:5609211-5609365 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 37, 0

Conread position: 37-187
Cow position: chr6:10105752-10105897 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 57, 0

Conread position: 37-187
Cow position: chr6:38640462-38640315 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 113
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 70, 0

Conread position: 37-187
Cow position: chr6:67951188-67951031 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 36, 21

Conread position: 40-184
Cow position: chr6:31228971-31228818 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 121
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 26, 141

Conread position: 41-184
Cow position: chr6:5113820-5113968 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 113
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 33, 93

Conread position: 41-186
Cow position: chr6:26155374-26155231 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 33, 73

Conread position: 41-187
Cow position: chr6:68816397-68816248 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 120
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 33, 12

Conread position: 42-166
Cow position: chr6:30688283-30688409 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 98
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 30, 67

Conread position: 42-185
Cow position: chr6:27219392-27219251 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 111
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 28, 65

Conread position: 42-187
Cow position: chr6:2758008-2757866 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 115
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 31, 59

Conread position: 43-187
Cow position: chr6:45690393-45690528 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 112
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 54, 0

Conread position: 46-187
Cow position: chr6:1870975-1871116 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 109
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 27, 67

Conread position: 53-183
Cow position: chr6:47676227-47676098 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 102
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 54, 10

Conread position: 58-187
Cow position: chr6:61168975-61168837 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 107
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 15, 0

Show alignments to all cow chromosomes.