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Cow genome map

           
Conread name:
           
rnca33b_d16.y1
        

               
Conread position:
               
1-124
               

               
Cow position:
               
chr14:21081683-21081810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
1-127
               

               
Cow position:
               
chr14:5556109-5556237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
72, 24
               

               
Conread position:
               
1-138
               

               
Cow position:
               
chr14:16593232-16593372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
1-139
               

               
Cow position:
               
chr14:5044528-5044662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
92, 20
               

               
Conread position:
               
1-146
               

               
Cow position:
               
chr14:39996461-39996608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
96, 71
               

               
Conread position:
               
1-150
               

               
Cow position:
               
chr14:10940012-10939859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
1-151
               

               
Cow position:
               
chr14:7433460-7433306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
1-151
               

               
Cow position:
               
chr14:12071675-12071521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
1-151
               

               
Cow position:
               
chr14:37504364-37504518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
1-154
               

               
Cow position:
               
chr14:24746308-24746473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
1-154
               

               
Cow position:
               
chr14:29011194-29011037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
1-154
               

               
Cow position:
               
chr14:36151176-36151331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
99, 71
               

               
Conread position:
               
1-158
               

               
Cow position:
               
chr14:19988210-19988049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
72, 113
               

               
Conread position:
               
1-160
               

               
Cow position:
               
chr14:26800148-26800311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
1-160
               

               
Cow position:
               
chr14:32784266-32784103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
1-161
               

               
Cow position:
               
chr14:11981316-11981480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
1-163
               

               
Cow position:
               
chr14:15796071-15795905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
1-167
               

               
Cow position:
               
chr14:27847208-27847369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
92, 20
               

               
Conread position:
               
1-169
               

               
Cow position:
               
chr14:2794261-2794090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
61, 104
               

               
Conread position:
               
1-169
               

               
Cow position:
               
chr14:20010656-20010484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
1-169
               

               
Cow position:
               
chr14:30023348-30023176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
1-169
               

               
Cow position:
               
chr14:39097356-39097530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
1-170
               

               
Cow position:
               
chr14:7280371-7280199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
1-171
               

               
Cow position:
               
chr14:27653013-27653187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
1-172
               

               
Cow position:
               
chr14:4481526-4481695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
91, 67
               

               
Conread position:
               
1-173
               

               
Cow position:
               
chr14:5668269-5668093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
1-173
               

               
Cow position:
               
chr14:23465200-23465024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
37, 25
               

               
Conread position:
               
1-173
               

               
Cow position:
               
chr14:34697327-34697497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
80, 71
               

               
Conread position:
               
1-173
               

               
Cow position:
               
chr14:44153136-44152951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
1-174
               

               
Cow position:
               
chr14:3573623-3573802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
1-174
               

               
Cow position:
               
chr14:41623178-41623344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
95, 67
               

               
Conread position:
               
1-175
               

               
Cow position:
               
chr14:7108354-7108533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
1-175
               

               
Cow position:
               
chr14:7582069-7581890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
72, 39
               

               
Conread position:
               
1-175
               

               
Cow position:
               
chr14:15392059-15392241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
1-175
               

               
Cow position:
               
chr14:23638485-23638307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
1-175
               

               
Cow position:
               
chr14:24428852-24428680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
89, 69
               

               
Conread position:
               
1-179
               

               
Cow position:
               
chr14:40107260-40107082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
111, 69
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr14:11079307-11079483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
95, 71
               

               
Conread position:
               
1-182
               

               
Cow position:
               
chr14:3871880-3871695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
1-182
               

               
Cow position:
               
chr14:11831947-11831754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
1-182
               

               
Cow position:
               
chr14:20915129-20914943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
72, 64
               

               
Conread position:
               
1-182
               

               
Cow position:
               
chr14:45301944-45301760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
71, 18
               

               
Conread position:
               
1-184
               

               
Cow position:
               
chr14:24597927-24597740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr14:35421235-35421045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
22, 82
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr14:35651928-35651748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
92, 67
               

               
Conread position:
               
1-187
               

               
Cow position:
               
chr14:19832541-19832354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
72, 25
               

               
Conread position:
               
1-187
               

               
Cow position:
               
chr14:24754802-24754995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
23, 164
               

               
Conread position:
               
1-188
               

               
Cow position:
               
chr14:22202278-22202090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
107, 71
               

               
Conread position:
               
1-188
               

               
Cow position:
               
chr14:47200282-47200083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
1-189
               

               
Cow position:
               
chr14:23005528-23005710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
72, 118
               

               
Conread position:
               
1-192
               

               
Cow position:
               
chr14:21557173-21556982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
89, 71
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr14:15211786-15211975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
92, 58
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr14:16287336-16287531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
72, 26
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr14:28957739-28957939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
1-198
               

               
Cow position:
               
chr14:7019935-7019735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
89, 71
               

               
Conread position:
               
1-198
               

               
Cow position:
               
chr14:7127712-7127908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
89, 74
               

               
Conread position:
               
1-198
               

               
Cow position:
               
chr14:44615299-44615098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
1-199
               

               
Cow position:
               
chr14:10496808-10497010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
1-199
               

               
Cow position:
               
chr14:24732086-24732289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
1-201
               

               
Cow position:
               
chr14:27364429-27364631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 154
               

               
Conread position:
               
1-203
               

               
Cow position:
               
chr14:20500827-20501032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
1-209
               

               
Cow position:
               
chr14:27330584-27330803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
1-209
               

               
Cow position:
               
chr14:36559374-36559165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
95, 26
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chr14:11576921-11577132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
99, 71
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chr14:35372360-35372145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chr14:18301808-18302026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
61, 23
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr14:5959141-5958921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr14:23441019-23440810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
72, 22
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr14:41082611-41082391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr14:20234340-20234126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
92, 22
               

               
Conread position:
               
1-219
               

               
Cow position:
               
chr14:27733460-27733673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
99, 67
               

               
Conread position:
               
1-220
               

               
Cow position:
               
chr14:6637377-6637155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
72, 112
               

               
Conread position:
               
1-220
               

               
Cow position:
               
chr14:15428330-15428550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
72, 51
               

               
Conread position:
               
1-220
               

               
Cow position:
               
chr14:23078940-23078721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
95, 58
               

               
Conread position:
               
1-220
               

               
Cow position:
               
chr14:25903384-25903603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
99, 67
               

               
Conread position:
               
1-220
               

               
Cow position:
               
chr14:28245016-28244795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
71, 156
               

               
Conread position:
               
1-221
               

               
Cow position:
               
chr14:10387510-10387732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
71, 167
               

               
Conread position:
               
1-221
               

               
Cow position:
               
chr14:10937522-10937752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
1-221
               

               
Cow position:
               
chr14:20984188-20984411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr14:20466788-20467004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
97, 71
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr14:37446822-37446597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
1-225
               

               
Cow position:
               
chr14:18937301-18937073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
1-226
               

               
Cow position:
               
chr14:14812371-14812144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
71, 220
               

               
Conread position:
               
1-227
               

               
Cow position:
               
chr14:11641686-11641470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
92, 23
               

               
Conread position:
               
1-227
               

               
Cow position:
               
chr14:24744786-24745017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
72, 212
               

               
Conread position:
               
1-229
               

               
Cow position:
               
chr14:12033393-12033161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
65, 148
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chr14:27884867-27885101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
69, 216
               

               
Conread position:
               
1-233
               

               
Cow position:
               
chr14:23419645-23419882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
67, 229
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr14:20482000-20481754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
55, 153
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr14:38719051-38719299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
16, 11
               

               
Conread position:
               
1-245
               

               
Cow position:
               
chr14:6360245-6360498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
72, 224
               

               
Conread position:
               
1-246
               

               
Cow position:
               
chr14:28465366-28465122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
71, 178
               

               
Conread position:
               
1-246
               

               
Cow position:
               
chr14:42693855-42693608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
71, 229
               

               
Conread position:
               
1-247
               

               
Cow position:
               
chr14:21371932-21371684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
62, 73
               

               
Conread position:
               
1-248
               

               
Cow position:
               
chr14:24945642-24945391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
70, 22
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr14:44713268-44713515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 205
               

               
Conread position:
               
1-251
               

               
Cow position:
               
chr14:12073104-12072849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
89, 76
               

               
Conread position:
               
1-251
               

               
Cow position:
               
chr14:16524321-16524577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
99, 12
               

               
Conread position:
               
1-251
               

               
Cow position:
               
chr14:17475715-17475454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
1-251
               

               
Cow position:
               
chr14:25227999-25228239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
99, 43
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr14:13928434-13928674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
94, 67
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr14:8923735-8923479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 29
               

               
Conread position:
               
1-255
               

               
Cow position:
               
chr14:7342317-7342558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
71, 23
               

               
Conread position:
               
1-255
               

               
Cow position:
               
chr14:16352210-16352450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
100, 68
               

               
Conread position:
               
1-255
               

               
Cow position:
               
chr14:40208760-40209005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
74, 50
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr14:12884116-12884375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
72, 88
               

               
Conread position:
               
1-257
               

               
Cow position:
               
chr14:23104144-23103889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 68
               

               
Conread position:
               
1-261
               

               
Cow position:
               
chr14:20577094-20576841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
85, 67
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr14:12142064-12141781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr14:39452062-39452322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
71, 157
               

               
Conread position:
               
1-267
               

               
Cow position:
               
chr14:27394612-27394346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
89, 67
               

               
Conread position:
               
1-267
               

               
Cow position:
               
chr14:29809144-29809417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
89, 71
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr14:45312648-45312911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
72, 51
               

               
Conread position:
               
1-272
               

               
Cow position:
               
chr14:36443165-36442895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 68
               

               
Conread position:
               
1-273
               

               
Cow position:
               
chr14:8949503-8949764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
110, 71
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr14:50414645-50414921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
111, 139
               

               
Conread position:
               
1-281
               

               
Cow position:
               
chr14:42419427-42419143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 22
               

               
Conread position:
               
1-282
               

               
Cow position:
               
chr14:12635025-12634755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
100, 50
               

               
Conread position:
               
1-284
               

               
Cow position:
               
chr14:41706413-41706145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
72, 136
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr14:4047598-4047886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
71, 80
               

               
Conread position:
               
1-294
               

               
Cow position:
               
chr14:1777995-1777702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
72, 101
               

               
Conread position:
               
1-299
               

               
Cow position:
               
chr14:12509634-12509338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
72, 222
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr14:5025130-5025432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
71, 221
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr14:11470298-11469998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 172
               

               
Conread position:
               
1-302
               

               
Cow position:
               
chr14:7036508-7036203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
1-302
               

               
Cow position:
               
chr14:11056881-11056588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 6
               

               
Conread position:
               
1-302
               

               
Cow position:
               
chr14:12954523-12954231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
114, 56
               

               
Conread position:
               
1-302
               

               
Cow position:
               
chr14:35533188-35532884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
72, 22
               

               
Conread position:
               
1-304
               

               
Cow position:
               
chr14:37422921-37422634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
100, 61
               

               
Conread position:
               
1-305
               

               
Cow position:
               
chr14:1708807-1708500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 230
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr14:30756693-30757000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 152
               

               
Conread position:
               
1-309
               

               
Cow position:
               
chr14:15504305-15504001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 42
               

               
Conread position:
               
1-312
               

               
Cow position:
               
chr14:22941888-22941560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 255
               

               
Conread position:
               
1-312
               

               
Cow position:
               
chr14:41302991-41302668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 230
               

               
Conread position:
               
1-316
               

               
Cow position:
               
chr14:26222588-26222910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
72, 27
               

               
Conread position:
               
1-325
               

               
Cow position:
               
chr14:49817834-49817521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
92, 71
               

               
Conread position:
               
1-328
               

               
Cow position:
               
chr14:33457193-33456864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 86
               

               
Conread position:
               
1-339
               

               
Cow position:
               
chr14:23080902-23080578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
42, 73
               

               
Conread position:
               
1-343
               

               
Cow position:
               
chr14:16550142-16549813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
96, 22
               

               
Conread position:
               
1-346
               

               
Cow position:
               
chr14:19321658-19321312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 203
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr14:4877375-4877034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 13
               

               
Conread position:
               
1-351
               

               
Cow position:
               
chr14:8867709-8867363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 127
               

               
Conread position:
               
1-351
               

               
Cow position:
               
chr14:38747531-38747862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 18
               

               
Conread position:
               
1-352
               

               
Cow position:
               
chr14:26796948-26796574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
72, 327
               

               
Conread position:
               
1-358
               

               
Cow position:
               
chr14:12342990-12342613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 351
               

               
Conread position:
               
1-362
               

               
Cow position:
               
chr14:23962706-23963081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
72, 87
               

               
Conread position:
               
1-362
               

               
Cow position:
               
chr14:36254837-36254496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
99, 58
               

               
Conread position:
               
1-363
               

               
Cow position:
               
chr14:41966077-41966451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 76
               

               
Conread position:
               
1-364
               

               
Cow position:
               
chr14:15997899-15997555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
87, 59
               

               
Conread position:
               
1-366
               

               
Cow position:
               
chr14:7799769-7800125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
90, 26
               

               
Conread position:
               
1-366
               

               
Cow position:
               
chr14:29592864-29592508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 101
               

               
Conread position:
               
1-374
               

               
Cow position:
               
chr14:25986364-25986739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 217
               

               
Conread position:
               
1-377
               

               
Cow position:
               
chr14:7479858-7480239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 242
               

               
Conread position:
               
1-379
               

               
Cow position:
               
chr14:15313410-15313782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 256
               

               
Conread position:
               
1-382
               

               
Cow position:
               
chr14:28803867-28803513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
309, 71
               

               
Conread position:
               
1-383
               

               
Cow position:
               
chr14:25979122-25979496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 181
               

               
Conread position:
               
1-384
               

               
Cow position:
               
chr14:20826343-20826702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
105, 78
               

               
Conread position:
               
1-395
               

               
Cow position:
               
chr14:20110870-20110479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 73
               

               
Conread position:
               
1-396
               

               
Cow position:
               
chr14:47252381-47251980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 225
               

               
Conread position:
               
1-400
               

               
Cow position:
               
chr14:50418268-50418648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
71, 147
               

               
Conread position:
               
1-403
               

               
Cow position:
               
chr14:27919883-27919489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 127
               

               
Conread position:
               
1-413
               

               
Cow position:
               
chr14:28115339-28114924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 108
               

               
Conread position:
               
1-414
               

               
Cow position:
               
chr14:11043642-11043230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 220
               

               
Conread position:
               
1-414
               

               
Cow position:
               
chr14:24981305-24981714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 23
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chr14:12961450-12961836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
92, 60
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chr14:38529831-38530233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
246, 45
               

               
Conread position:
               
1-430
               

               
Cow position:
               
chr14:10609531-10609965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 25
               

               
Conread position:
               
1-430
               

               
Cow position:
               
chr14:10858292-10858708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 59
               

               
Conread position:
               
1-435
               

               
Cow position:
               
chr14:6541875-6541440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 75
               

               
Conread position:
               
1-438
               

               
Cow position:
               
chr14:12036977-12036557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 150
               

               
Conread position:
               
1-439
               

               
Cow position:
               
chr14:35498642-35498215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 36
               

               
Conread position:
               
1-439
               

               
Cow position:
               
chr14:47673027-47672597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 74
               

               
Conread position:
               
1-447
               

               
Cow position:
               
chr14:24921950-24922399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 159
               

               
Conread position:
               
1-452
               

               
Cow position:
               
chr14:49929893-49929437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 12
               

               
Conread position:
               
1-455
               

               
Cow position:
               
chr14:8541355-8540915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 61
               

               
Conread position:
               
1-455
               

               
Cow position:
               
chr14:32452103-32452562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 48
               

               
Conread position:
               
1-457
               

               
Cow position:
               
chr14:15913701-15913251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 12
               

               
Conread position:
               
1-460
               

               
Cow position:
               
chr14:1715580-1716040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 193
               

               
Conread position:
               
1-461
               

               
Cow position:
               
chr14:13809806-13810243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 61
               

               
Conread position:
               
1-461
               

               
Cow position:
               
chr14:14466608-14466172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 161
               

               
Conread position:
               
1-461
               

               
Cow position:
               
chr14:15518551-15518072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 428
               

               
Conread position:
               
1-462
               

               
Cow position:
               
chr14:19594283-19593832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 51
               

               
Conread position:
               
1-462
               

               
Cow position:
               
chr14:33714822-33714380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 77
               

               
Conread position:
               
1-462
               

               
Cow position:
               
chr14:33791045-33791497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 61
               

               
Conread position:
               
1-462
               

               
Cow position:
               
chr14:45677083-45677531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 54
               

               
Conread position:
               
1-464
               

               
Cow position:
               
chr14:33774172-33773743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
200, 36
               

               
Conread position:
               
1-475
               

               
Cow position:
               
chr14:5630020-5630483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 68
               

               
Conread position:
               
1-477
               

               
Cow position:
               
chr14:38378856-38379344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 16
               

               
Conread position:
               
1-496
               

               
Cow position:
               
chr14:19206716-19207209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 222
               

               
Conread position:
               
1-517
               

               
Cow position:
               
chr14:18309448-18308941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 67
               

               
Conread position:
               
1-518
               

               
Cow position:
               
chr14:24236674-24237183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 90
               

               
Conread position:
               
1-533
               

               
Cow position:
               
chr14:42330198-42330737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 217
               

               
Conread position:
               
1-551
               

               
Cow position:
               
chr14:20016858-20016305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 240
               

               
Conread position:
               
1-560
               

               
Cow position:
               
chr14:2937493-2938055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 222
               

               
Conread position:
               
1-560
               

               
Cow position:
               
chr14:31130525-31129976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 65
               

               
Conread position:
               
1-564
               

               
Cow position:
               
chr14:27355246-27355803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 224
               

               
Conread position:
               
1-571
               

               
Cow position:
               
chr14:6736016-6735447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 42
               

               
Conread position:
               
1-591
               

               
Cow position:
               
chr14:28304935-28304339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
611
               

               
Alignm identity:
               
464
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 112
               

               
Conread position:
               
1-596
               

               
Cow position:
               
chr14:20321217-20320662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
606
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 26
               

               
Conread position:
               
1-601
               

               
Cow position:
               
chr14:22988887-22989488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
614
               

               
Alignm identity:
               
459
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 13
               

               
Conread position:
               
1-611
               

               
Cow position:
               
chr14:50362644-50363260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
630
               

               
Alignm identity:
               
478
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 37
               

               
Conread position:
               
1-614
               

               
Cow position:
               
chr14:16237658-16237040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
632
               

               
Alignm identity:
               
476
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 36
               

               
Conread position:
               
1-615
               

               
Cow position:
               
chr14:50589538-50588933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
644
               

               
Alignm identity:
               
455
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 23
               

               
Conread position:
               
1-616
               

               
Cow position:
               
chr14:23090529-23089892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
650
               

               
Alignm identity:
               
444
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 62
               

               
Conread position:
               
1-621
               

               
Cow position:
               
chr14:21357409-21358035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
649
               

               
Alignm identity:
               
495
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 71
               

               
Conread position:
               
1-623
               

               
Cow position:
               
chr14:17899331-17899948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
645
               

               
Alignm identity:
               
454
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 46
               

               
Conread position:
               
1-627
               

               
Cow position:
               
chr14:12244530-12243908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
638
               

               
Alignm identity:
               
469
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 66
               

               
Conread position:
               
1-627
               

               
Cow position:
               
chr14:20640777-20640141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
644
               

               
Alignm identity:
               
480
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 72
               

               
Conread position:
               
1-627
               

               
Cow position:
               
chr14:43046028-43046627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
640
               

               
Alignm identity:
               
450
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 18
               

               
Conread position:
               
1-628
               

               
Cow position:
               
chr14:6490851-6490225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
648
               

               
Alignm identity:
               
466
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 212
               

               
Conread position:
               
1-628
               

               
Cow position:
               
chr14:48492947-48492313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
648
               

               
Alignm identity:
               
462
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 212
               

               
Conread position:
               
1-629
               

               
Cow position:
               
chr14:14622316-14621698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
652
               

               
Alignm identity:
               
481
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 67
               

               
Conread position:
               
1-629
               

               
Cow position:
               
chr14:26115910-26116544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
643
               

               
Alignm identity:
               
479
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 161
               

               
Conread position:
               
1-629
               

               
Cow position:
               
chr14:28987541-28988172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
652
               

               
Alignm identity:
               
498
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 171
               

               
Conread position:
               
1-629
               

               
Cow position:
               
chr14:30760068-30760690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
648
               

               
Alignm identity:
               
456
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 126
               

               
Conread position:
               
1-629
               

               
Cow position:
               
chr14:38144258-38143652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
637
               

               
Alignm identity:
               
480
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 215
               

               
Conread position:
               
1-629
               

               
Cow position:
               
chr14:40230783-40230156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
643
               

               
Alignm identity:
               
487
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 25
               

               
Conread position:
               
1-629
               

               
Cow position:
               
chr14:41749904-41749291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
642
               

               
Alignm identity:
               
454
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 72
               

               
Conread position:
               
2-152
               

               
Cow position:
               
chr14:41756009-41756153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
71, 104
               

               
Conread position:
               
2-154
               

               
Cow position:
               
chr14:23926368-23926209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
84, 21
               

               
Conread position:
               
2-158
               

               
Cow position:
               
chr14:31342062-31342222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
2-174
               

               
Cow position:
               
chr14:39518600-39518771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
99, 66
               

               
Conread position:
               
2-182
               

               
Cow position:
               
chr14:47224519-47224332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
58, 162
               

               
Conread position:
               
2-188
               

               
Cow position:
               
chr14:18412741-18412551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
2-189
               

               
Cow position:
               
chr14:8083049-8083240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
70, 87
               

               
Conread position:
               
2-189
               

               
Cow position:
               
chr14:11472378-11472189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
64, 178
               

               
Conread position:
               
2-203
               

               
Cow position:
               
chr14:15470133-15469927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
57, 92
               

               
Conread position:
               
2-203
               

               
Cow position:
               
chr14:35065539-35065744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
15, 9
               

               
Conread position:
               
2-203
               

               
Cow position:
               
chr14:36775516-36775705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
104, 59
               

               
Conread position:
               
2-220
               

               
Cow position:
               
chr14:13731244-13731026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
91, 57
               

               
Conread position:
               
2-220
               

               
Cow position:
               
chr14:33578225-33578006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
70, 171
               

               
Conread position:
               
2-223
               

               
Cow position:
               
chr14:38286132-38285894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
71, 217
               

               
Conread position:
               
2-234
               

               
Cow position:
               
chr14:22997743-22997490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
2-235
               

               
Cow position:
               
chr14:6898925-6899159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
70, 179
               

               
Conread position:
               
2-249
               

               
Cow position:
               
chr14:33546506-33546255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
70, 226
               

               
Conread position:
               
2-250
               

               
Cow position:
               
chr14:4469731-4469472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
71, 144
               

               
Conread position:
               
2-261
               

               
Cow position:
               
chr14:12146628-12146368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
70, 92
               

               
Conread position:
               
2-263
               

               
Cow position:
               
chr14:6655736-6655468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
57, 116
               

               
Conread position:
               
2-263
               

               
Cow position:
               
chr14:49713833-49714092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
110, 68
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr14:39415011-39415279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
70, 215
               

               
Conread position:
               
2-272
               

               
Cow position:
               
chr14:1796050-1796312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 25
               

               
Conread position:
               
2-282
               

               
Cow position:
               
chr14:15944814-15944536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
60, 129
               

               
Conread position:
               
2-290
               

               
Cow position:
               
chr14:7621279-7620994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
70, 130
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr14:20954535-20954839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
71, 84
               

               
Conread position:
               
2-312
               

               
Cow position:
               
chr14:40486790-40486488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
71, 192
               

               
Conread position:
               
2-312
               

               
Cow position:
               
chr14:40754391-40754082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 68
               

               
Conread position:
               
2-317
               

               
Cow position:
               
chr14:20556487-20556798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
80, 193
               

               
Conread position:
               
2-317
               

               
Cow position:
               
chr14:24748369-24748069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
70, 157
               

               
Conread position:
               
2-365
               

               
Cow position:
               
chr14:27338191-27338557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 177
               

               
Conread position:
               
2-378
               

               
Cow position:
               
chr14:21498758-21498391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
70, 193
               

               
Conread position:
               
2-404
               

               
Cow position:
               
chr14:12667582-12667982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 27
               

               
Conread position:
               
2-439
               

               
Cow position:
               
chr14:11810707-11810284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 162
               

               
Conread position:
               
2-496
               

               
Cow position:
               
chr14:7290652-7291136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 208
               

               
Conread position:
               
2-514
               

               
Cow position:
               
chr14:48426925-48427442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 76
               

               
Conread position:
               
2-531
               

               
Cow position:
               
chr14:36437636-36437101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 232
               

               
Conread position:
               
2-532
               

               
Cow position:
               
chr14:37103060-37103583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 214
               

               
Conread position:
               
2-561
               

               
Cow position:
               
chr14:38168557-38169090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
215, 58
               

               
Conread position:
               
2-596
               

               
Cow position:
               
chr14:49824760-49824191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
606
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 21
               

               
Conread position:
               
2-618
               

               
Cow position:
               
chr14:34200006-34199362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
658
               

               
Alignm identity:
               
481
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 233
               

               
Conread position:
               
2-629
               

               
Cow position:
               
chr14:21201967-21201346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
645
               

               
Alignm identity:
               
465
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 112
               

               
Conread position:
               
3-145
               

               
Cow position:
               
chr14:12137871-12138014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
74, 20
               

               
Conread position:
               
3-146
               

               
Cow position:
               
chr14:41871735-41871589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
69, 125
               

               
Conread position:
               
3-150
               

               
Cow position:
               
chr14:19772420-19772273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
109, 69
               

               
Conread position:
               
3-154
               

               
Cow position:
               
chr14:25912508-25912657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
90, 54
               

               
Conread position:
               
3-159
               

               
Cow position:
               
chr14:47893967-47894127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
3-160
               

               
Cow position:
               
chr14:33618162-33618315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
107, 67
               

               
Conread position:
               
3-163
               

               
Cow position:
               
chr14:29282606-29282770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
3-165
               

               
Cow position:
               
chr14:21968654-21968493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
97, 69
               

               
Conread position:
               
3-169
               

               
Cow position:
               
chr14:8027713-8027539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
3-170
               

               
Cow position:
               
chr14:7271404-7271228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
3-170
               

               
Cow position:
               
chr14:18112737-18112571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
89, 65
               

               
Conread position:
               
3-171
               

               
Cow position:
               
chr14:10920714-10920540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
3-173
               

               
Cow position:
               
chr14:25284850-25285023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
69, 17
               

               
Conread position:
               
3-173
               

               
Cow position:
               
chr14:37152081-37151915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
97, 69
               

               
Conread position:
               
3-175
               

               
Cow position:
               
chr14:28097498-28097674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
3-181
               

               
Cow position:
               
chr14:23237813-23237637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
87, 55
               

               
Conread position:
               
3-184
               

               
Cow position:
               
chr14:4867933-4868118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
3-190
               

               
Cow position:
               
chr14:40012127-40011939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
87, 69
               

               
Conread position:
               
3-190
               

               
Cow position:
               
chr14:40347788-40347604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
90, 59
               

               
Conread position:
               
3-192
               

               
Cow position:
               
chr14:7094210-7094013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
3-198
               

               
Cow position:
               
chr14:20245314-20245119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
87, 65
               

               
Conread position:
               
3-213
               

               
Cow position:
               
chr14:18559203-18558996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
102, 67
               

               
Conread position:
               
3-214
               

               
Cow position:
               
chr14:1814807-1814591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
78, 24
               

               
Conread position:
               
3-217
               

               
Cow position:
               
chr14:26918847-26919066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
70, 162
               

               
Conread position:
               
3-218
               

               
Cow position:
               
chr14:45955141-45955352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
13, 150
               

               
Conread position:
               
3-221
               

               
Cow position:
               
chr14:49940867-49941080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
90, 72
               

               
Conread position:
               
3-222
               

               
Cow position:
               
chr14:36425550-36425337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
97, 66
               

               
Conread position:
               
3-228
               

               
Cow position:
               
chr14:10706732-10706952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
107, 70
               

               
Conread position:
               
3-231
               

               
Cow position:
               
chr14:26172543-26172312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
69, 218
               

               
Conread position:
               
3-237
               

               
Cow position:
               
chr14:10851881-10852119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
70, 168
               

               
Conread position:
               
3-250
               

               
Cow position:
               
chr14:48900024-48900276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
68, 19
               

               
Conread position:
               
3-255
               

               
Cow position:
               
chr14:7198349-7198607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
3-255
               

               
Cow position:
               
chr14:29964871-29965122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 127
               

               
Conread position:
               
3-264
               

               
Cow position:
               
chr14:6864852-6865118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
3-268
               

               
Cow position:
               
chr14:27999185-27998923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
85, 191
               

               
Conread position:
               
3-271
               

               
Cow position:
               
chr14:10693403-10693138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
69, 156
               

               
Conread position:
               
3-275
               

               
Cow position:
               
chr14:4282656-4282383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 24
               

               
Conread position:
               
3-275
               

               
Cow position:
               
chr14:44557966-44557686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
59, 70
               

               
Conread position:
               
3-278
               

               
Cow position:
               
chr14:19193316-19193601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
56, 231
               

               
Conread position:
               
3-281
               

               
Cow position:
               
chr14:50499463-50499197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
96, 26
               

               
Conread position:
               
3-288
               

               
Cow position:
               
chr14:34775895-34775608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 225
               

               
Conread position:
               
3-294
               

               
Cow position:
               
chr14:28153891-28153602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
103, 231
               

               
Conread position:
               
3-296
               

               
Cow position:
               
chr14:12855938-12855647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
69, 138
               

               
Conread position:
               
3-296
               

               
Cow position:
               
chr14:33229546-33229249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
87, 74
               

               
Conread position:
               
3-307
               

               
Cow position:
               
chr14:23424119-23424414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 52
               

               
Conread position:
               
3-307
               

               
Cow position:
               
chr14:23442880-23443175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 52
               

               
Conread position:
               
3-325
               

               
Cow position:
               
chr14:12512037-12511728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 65
               

               
Conread position:
               
3-330
               

               
Cow position:
               
chr14:44084622-44084301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
99, 54
               

               
Conread position:
               
3-339
               

               
Cow position:
               
chr14:40329295-40329631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 218
               

               
Conread position:
               
3-340
               

               
Cow position:
               
chr14:21933491-21933153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 259
               

               
Conread position:
               
3-347
               

               
Cow position:
               
chr14:15492445-15492791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
70, 20
               

               
Conread position:
               
3-352
               

               
Cow position:
               
chr14:36289937-36289600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 70
               

               
Conread position:
               
3-365
               

               
Cow position:
               
chr14:2975232-2974882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 77
               

               
Conread position:
               
3-393
               

               
Cow position:
               
chr14:5995659-5996051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
71, 216
               

               
Conread position:
               
3-420
               

               
Cow position:
               
chr14:11846351-11846766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 138
               

               
Conread position:
               
3-422
               

               
Cow position:
               
chr14:8786683-8786281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 55
               

               
Conread position:
               
3-432
               

               
Cow position:
               
chr14:48447311-48446882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 78
               

               
Conread position:
               
3-433
               

               
Cow position:
               
chr14:3868577-3868151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 219
               

               
Conread position:
               
3-445
               

               
Cow position:
               
chr14:4227369-4226904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 44
               

               
Conread position:
               
3-462
               

               
Cow position:
               
chr14:23682121-23682571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 69
               

               
Conread position:
               
3-465
               

               
Cow position:
               
chr14:19852082-19851609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 150
               

               
Conread position:
               
3-474
               

               
Cow position:
               
chr14:45052292-45052758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 219
               

               
Conread position:
               
3-531
               

               
Cow position:
               
chr14:33247566-33247043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 65
               

               
Conread position:
               
3-580
               

               
Cow position:
               
chr14:40253072-40253647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
591
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 103
               

               
Conread position:
               
3-601
               

               
Cow position:
               
chr14:20010460-20009865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
608
               

               
Alignm identity:
               
436
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 295
               

               
Conread position:
               
3-617
               

               
Cow position:
               
chr14:9019895-9020498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
627
               

               
Alignm identity:
               
457
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
322, 52
               

               
Conread position:
               
3-618
               

               
Cow position:
               
chr14:13006378-13006975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
630
               

               
Alignm identity:
               
482
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 98
               

               
Conread position:
               
3-618
               

               
Cow position:
               
chr14:36166794-36167406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
632
               

               
Alignm identity:
               
442
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 144
               

               
Conread position:
               
3-619
               

               
Cow position:
               
chr14:18941434-18940839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
624
               

               
Alignm identity:
               
477
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 130
               

               
Conread position:
               
3-623
               

               
Cow position:
               
chr14:6600098-6599476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
636
               

               
Alignm identity:
               
468
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 74
               

               
Conread position:
               
3-627
               

               
Cow position:
               
chr14:35381443-35382064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
635
               

               
Alignm identity:
               
485
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 150
               

               
Conread position:
               
3-627
               

               
Cow position:
               
chr14:47609730-47609126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
638
               

               
Alignm identity:
               
450
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 217
               

               
Conread position:
               
3-627
               

               
Cow position:
               
chr14:50027084-50027690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
640
               

               
Alignm identity:
               
438
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 69
               

               
Conread position:
               
3-629
               

               
Cow position:
               
chr14:13385220-13385855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
641
               

               
Alignm identity:
               
471
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 235
               

               
Conread position:
               
3-629
               

               
Cow position:
               
chr14:28378211-28378843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
644
               

               
Alignm identity:
               
506
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 36
               

               
Conread position:
               
3-629
               

               
Cow position:
               
chr14:35420908-35420278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
638
               

               
Alignm identity:
               
485
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 42
               

               
Conread position:
               
3-629
               

               
Cow position:
               
chr14:39434400-39433799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
630
               

               
Alignm identity:
               
457
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 66
               

               
Conread position:
               
3-629
               

               
Cow position:
               
chr14:44237873-44237218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
657
               

               
Alignm identity:
               
470
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 461
               

               
Conread position:
               
3-629
               

               
Cow position:
               
chr14:48496293-48495667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
643
               

               
Alignm identity:
               
469
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 130
               

               
Conread position:
               
4-153
               

               
Cow position:
               
chr14:37236225-37236375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
69, 19
               

               
Conread position:
               
4-160
               

               
Cow position:
               
chr14:20513082-20513242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
4-162
               

               
Cow position:
               
chr14:21593146-21592990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
89, 6
               

               
Conread position:
               
4-163
               

               
Cow position:
               
chr14:20035573-20035737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
4-165
               

               
Cow position:
               
chr14:11280258-11280096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
81, 69
               

               
Conread position:
               
4-171
               

               
Cow position:
               
chr14:41267868-41267709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
96, 65
               

               
Conread position:
               
4-187
               

               
Cow position:
               
chr14:24399449-24399263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
4-207
               

               
Cow position:
               
chr14:18351012-18350798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
4-214
               

               
Cow position:
               
chr14:20047854-20047639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
86, 54
               

               
Conread position:
               
4-219
               

               
Cow position:
               
chr14:7872667-7872891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
4-231
               

               
Cow position:
               
chr14:28924020-28924249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 213
               

               
Conread position:
               
4-243
               

               
Cow position:
               
chr14:21224498-21224733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
150, 69
               

               
Conread position:
               
4-245
               

               
Cow position:
               
chr14:5553172-5553415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
66, 233
               

               
Conread position:
               
4-249
               

               
Cow position:
               
chr14:37901855-37902098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
88, 55
               

               
Conread position:
               
4-282
               

               
Cow position:
               
chr14:22866017-22865734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
69, 141
               

               
Conread position:
               
4-317
               

               
Cow position:
               
chr14:3949249-3948936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
68, 218
               

               
Conread position:
               
4-317
               

               
Cow position:
               
chr14:35503218-35503533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 67
               

               
Conread position:
               
4-351
               

               
Cow position:
               
chr14:42246859-42247187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 19
               

               
Conread position:
               
4-354
               

               
Cow position:
               
chr14:29590763-29590418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
46, 223
               

               
Conread position:
               
4-357
               

               
Cow position:
               
chr14:27823287-27823640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
69, 19
               

               
Conread position:
               
4-397
               

               
Cow position:
               
chr14:16760254-16760642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
96, 75
               

               
Conread position:
               
4-465
               

               
Cow position:
               
chr14:23712550-23712997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 66
               

               
Conread position:
               
4-466
               

               
Cow position:
               
chr14:5222430-5221975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 22
               

               
Conread position:
               
4-552
               

               
Cow position:
               
chr14:42155112-42154557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
414
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 55
               

               
Conread position:
               
4-577
               

               
Cow position:
               
chr14:26433394-26432820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
590
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 96
               

               
Conread position:
               
4-619
               

               
Cow position:
               
chr14:44742517-44741914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
629
               

               
Alignm identity:
               
451
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 89
               

               
Conread position:
               
5-174
               

               
Cow position:
               
chr14:18306049-18306230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
53, 117
               

               
Conread position:
               
5-220
               

               
Cow position:
               
chr14:21535447-21535234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
96, 64
               

               
Conread position:
               
5-278
               

               
Cow position:
               
chr14:12081270-12081010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 62
               

               
Conread position:
               
5-315
               

               
Cow position:
               
chr14:26655281-26654966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 214
               

               
Conread position:
               
5-328
               

               
Cow position:
               
chr14:33341607-33341934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 138
               

               
Conread position:
               
5-391
               

               
Cow position:
               
chr14:14949358-14948973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 68
               

               
Conread position:
               
5-618
               

               
Cow position:
               
chr14:27848035-27848670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
645
               

               
Alignm identity:
               
479
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 22
               

               
Conread position:
               
5-627
               

               
Cow position:
               
chr14:13582899-13582294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
632
               

               
Alignm identity:
               
442
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 228
               

               
Conread position:
               
5-629
               

               
Cow position:
               
chr14:7959654-7960248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
643
               

               
Alignm identity:
               
457
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 61
               

               
Conread position:
               
6-154
               

               
Cow position:
               
chr14:22231051-22230902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
67, 73
               

               
Conread position:
               
6-371
               

               
Cow position:
               
chr14:4025137-4024784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
103, 60
               

               
Conread position:
               
6-412
               

               
Cow position:
               
chr14:24387308-24387709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 17
               

               
Conread position:
               
6-418
               

               
Cow position:
               
chr14:13845846-13846250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 47
               

               
Conread position:
               
6-423
               

               
Cow position:
               
chr14:40165286-40165690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 15
               

               
Conread position:
               
6-449
               

               
Cow position:
               
chr14:26941364-26940928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 79
               

               
Conread position:
               
6-585
               

               
Cow position:
               
chr14:8101654-8102215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
590
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 47
               

               
Conread position:
               
7-278
               

               
Cow position:
               
chr14:12127539-12127284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
7-352
               

               
Cow position:
               
chr14:46685156-46685500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
59, 119
               

               
Conread position:
               
8-219
               

               
Cow position:
               
chr14:40191453-40191656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
85, 65
               

               
Conread position:
               
10-189
               

               
Cow position:
               
chr14:13516131-13515951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
62, 136
               

               
Conread position:
               
10-192
               

               
Cow position:
               
chr14:46431928-46432112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
62, 164
               

               
Conread position:
               
10-221
               

               
Cow position:
               
chr14:28131434-28131216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
10-261
               

               
Cow position:
               
chr14:24527302-24527050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
80, 62
               

               
Conread position:
               
10-513
               

               
Cow position:
               
chr14:17013381-17013873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 122
               

               
Conread position:
               
11-629
               

               
Cow position:
               
chr14:41472114-41471486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
644
               

               
Alignm identity:
               
447
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 223
               

               
Conread position:
               
13-160
               

               
Cow position:
               
chr14:37966805-37966955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
59, 112
               

               
Conread position:
               
13-174
               

               
Cow position:
               
chr14:14280103-14280258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
82, 36
               

               
Conread position:
               
13-190
               

               
Cow position:
               
chr14:38674067-38673879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
45, 161
               

               
Conread position:
               
13-198
               

               
Cow position:
               
chr14:28401671-28401857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
60, 166
               

               
Conread position:
               
13-216
               

               
Cow position:
               
chr14:16749832-16749617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
13-216
               

               
Cow position:
               
chr14:24712768-24712556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
13-288
               

               
Cow position:
               
chr14:40474426-40474699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
60, 141
               

               
Conread position:
               
13-356
               

               
Cow position:
               
chr14:26628662-26628318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 204
               

               
Conread position:
               
13-430
               

               
Cow position:
               
chr14:7695127-7695526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 150
               

               
Conread position:
               
13-466
               

               
Cow position:
               
chr14:20932486-20932930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 55
               

               
Conread position:
               
13-627
               

               
Cow position:
               
chr14:12520440-12519852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
627
               

               
Alignm identity:
               
461
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 64
               

               
Conread position:
               
13-627
               

               
Cow position:
               
chr14:17755440-17756039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
629
               

               
Alignm identity:
               
473
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 23
               

               
Conread position:
               
14-206
               

               
Cow position:
               
chr14:14224430-14224626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
14-461
               

               
Cow position:
               
chr14:1646319-1645882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 13
               

               
Conread position:
               
15-179
               

               
Cow position:
               
chr14:21530210-21530045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
58, 144
               

               
Conread position:
               
15-189
               

               
Cow position:
               
chr14:9403327-9403505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
15-224
               

               
Cow position:
               
chr14:26825054-26825266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
57, 207
               

               
Conread position:
               
15-247
               

               
Cow position:
               
chr14:17335486-17335249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
57, 87
               

               
Conread position:
               
15-249
               

               
Cow position:
               
chr14:41191232-41190985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
61, 219
               

               
Conread position:
               
15-268
               

               
Cow position:
               
chr14:7067868-7067610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
56, 14
               

               
Conread position:
               
15-283
               

               
Cow position:
               
chr14:22236617-22236353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
58, 71
               

               
Conread position:
               
15-360
               

               
Cow position:
               
chr14:14417631-14417288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
75, 58
               

               
Conread position:
               
15-374
               

               
Cow position:
               
chr14:8946217-8945862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 54
               

               
Conread position:
               
15-392
               

               
Cow position:
               
chr14:20302138-20301769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 197
               

               
Conread position:
               
15-397
               

               
Cow position:
               
chr14:13042625-13043004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 45
               

               
Conread position:
               
15-511
               

               
Cow position:
               
chr14:41809789-41809289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 171
               

               
Conread position:
               
15-629
               

               
Cow position:
               
chr14:18485389-18484781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
629
               

               
Alignm identity:
               
452
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 71
               

               
Conread position:
               
16-188
               

               
Cow position:
               
chr14:12763840-12763668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
91, 76
               

               
Conread position:
               
16-216
               

               
Cow position:
               
chr14:22916427-22916223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
43, 25
               

               
Conread position:
               
16-263
               

               
Cow position:
               
chr14:15306260-15306010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
61, 218
               

               
Conread position:
               
17-271
               

               
Cow position:
               
chr14:50337647-50337898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
17-280
               

               
Cow position:
               
chr14:11285447-11285705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 29
               

               
Conread position:
               
17-629
               

               
Cow position:
               
chr14:47584795-47584167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
635
               

               
Alignm identity:
               
435
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 202
               

               
Conread position:
               
18-175
               

               
Cow position:
               
chr14:1771089-1770934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
55, 70
               

               
Conread position:
               
18-192
               

               
Cow position:
               
chr14:33328831-33329004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
75, 50
               

               
Conread position:
               
21-144
               

               
Cow position:
               
chr14:25277645-25277766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
72, 47
               

               
Conread position:
               
21-181
               

               
Cow position:
               
chr14:12617622-12617466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
72, 47
               

               
Conread position:
               
22-203
               

               
Cow position:
               
chr14:9307936-9308120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
51, 65
               

               
Conread position:
               
22-332
               

               
Cow position:
               
chr14:27076839-27077165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 268
               

               
Conread position:
               
22-380
               

               
Cow position:
               
chr14:30606047-30605690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 197
               

               
Conread position:
               
22-452
               

               
Cow position:
               
chr14:48740997-48740588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 71
               

               
Conread position:
               
22-464
               

               
Cow position:
               
chr14:41127779-41128200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 77
               

               
Conread position:
               
23-203
               

               
Cow position:
               
chr14:1431950-1431777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
77, 45
               

               
Conread position:
               
24-233
               

               
Cow position:
               
chr14:45291496-45291292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
194, 45
               

               
Conread position:
               
24-349
               

               
Cow position:
               
chr14:24607836-24608163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
49, 139
               

               
Conread position:
               
24-629
               

               
Cow position:
               
chr14:41479788-41479177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
619
               

               
Alignm identity:
               
451
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 49
               

               
Conread position:
               
27-350
               

               
Cow position:
               
chr14:46973316-46973634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 61
               

               
Conread position:
               
27-465
               

               
Cow position:
               
chr14:27305027-27305467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 97
               

               
Conread position:
               
27-622
               

               
Cow position:
               
chr14:38548678-38549269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
621
               

               
Alignm identity:
               
447
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 121
               

               
Conread position:
               
29-579
               

               
Cow position:
               
chr14:19618872-19618327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
425
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 37
               

               
Conread position:
               
29-618
               

               
Cow position:
               
chr14:19188930-19189509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
605
               

               
Alignm identity:
               
437
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 39
               

               
Conread position:
               
30-183
               

               
Cow position:
               
chr14:11576076-11576233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
30-323
               

               
Cow position:
               
chr14:7421177-7420881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
43, 207
               

               
Conread position:
               
30-341
               

               
Cow position:
               
chr14:4203216-4202904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 45
               

               
Conread position:
               
30-366
               

               
Cow position:
               
chr14:23761762-23762094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
88, 43
               

               
Conread position:
               
30-392
               

               
Cow position:
               
chr14:37447587-37447240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 130
               

               
Conread position:
               
37-173
               

               
Cow position:
               
chr14:33468663-33468795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
36, 86
               

               
Conread position:
               
38-530
               

               
Cow position:
               
chr14:20712801-20712300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 99
               

               
Conread position:
               
39-254
               

               
Cow position:
               
chr14:39095299-39095077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
31, 130
               

               
Conread position:
               
41-629
               

               
Cow position:
               
chr14:38920840-38921399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
601
               

               
Alignm identity:
               
431
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 120
               

               
Conread position:
               
44-409
               

               
Cow position:
               
chr14:6175497-6175838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 29
               

               
Conread position:
               
46-332
               

               
Cow position:
               
chr14:1859713-1859434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 9
               

               
Conread position:
               
46-627
               

               
Cow position:
               
chr14:28795566-28796148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
595
               

               
Alignm identity:
               
438
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 175
               

               
Conread position:
               
47-460
               

               
Cow position:
               
chr14:30661892-30662293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 74
               

               
Conread position:
               
49-253
               

               
Cow position:
               
chr14:2344969-2345172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
24, 37
               

               
Conread position:
               
49-629
               

               
Cow position:
               
chr14:13426752-13427286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
589
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 21
               

               
Conread position:
               
49-629
               

               
Cow position:
               
chr14:28091064-28090493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
594
               

               
Alignm identity:
               
437
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 89
               

               
Conread position:
               
51-370
               

               
Cow position:
               
chr14:12035312-12035625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 22
               

               
Conread position:
               
52-434
               

               
Cow position:
               
chr14:37884505-37884130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 19
               

               
Conread position:
               
53-404
               

               
Cow position:
               
chr14:16032916-16033257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 6
               

               
Conread position:
               
54-627
               

               
Cow position:
               
chr14:15055087-15054515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 19
               

               
Conread position:
               
55-471
               

               
Cow position:
               
chr14:49021990-49021587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 18
               

               
Conread position:
               
56-254
               

               
Cow position:
               
chr14:803590-803791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
17, 89
               

               
Conread position:
               
57-462
               

               
Cow position:
               
chr14:18657700-18657292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 29
               

               
Conread position:
               
58-186
               

               
Cow position:
               
chr14:25073033-25073163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
52, 12
               

               
Conread position:
               
58-307
               

               
Cow position:
               
chr14:18763528-18763288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
15, 63
               

               
Conread position:
               
58-309
               

               
Cow position:
               
chr14:42436931-42437184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 121
               

               
Conread position:
               
58-358
               

               
Cow position:
               
chr14:5572850-5573148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 169
               

               
Conread position:
               
58-365
               

               
Cow position:
               
chr14:33830208-33830510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 105
               

               
Conread position:
               
58-460
               

               
Cow position:
               
chr14:26097789-26097382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 178
               

               
Conread position:
               
58-461
               

               
Cow position:
               
chr14:44257830-44258221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 245
               

               
Conread position:
               
58-517
               

               
Cow position:
               
chr14:17238268-17238729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 57
               

               
Conread position:
               
58-569
               

               
Cow position:
               
chr14:43453284-43452755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 42
               

               
Conread position:
               
58-578
               

               
Cow position:
               
chr14:9539279-9538767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 101
               

               
Conread position:
               
58-618
               

               
Cow position:
               
chr14:22583063-22583611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
425
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 15
               

               
Conread position:
               
59-251
               

               
Cow position:
               
chr14:3943641-3943452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
37, 14
               

               
Conread position:
               
59-412
               

               
Cow position:
               
chr14:34983774-34984122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 164
               

               
Conread position:
               
59-419
               

               
Cow position:
               
chr14:28003874-28004246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 133
               

               
Conread position:
               
59-428
               

               
Cow position:
               
chr14:8749986-8750350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
47, 14
               

               
Conread position:
               
59-456
               

               
Cow position:
               
chr14:4990909-4991293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 199
               

               
Conread position:
               
59-622
               

               
Cow position:
               
chr14:45605005-45605572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
584
               

               
Alignm identity:
               
431
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 75
               

               
Conread position:
               
59-629
               

               
Cow position:
               
chr14:39618469-39617904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
577
               

               
Alignm identity:
               
434
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 197
               

               
Conread position:
               
60-285
               

               
Cow position:
               
chr14:25824607-25824822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
49, 13
               

               
Conread position:
               
60-312
               

               
Cow position:
               
chr14:36453710-36453469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
13, 60
               

               
Conread position:
               
60-361
               

               
Cow position:
               
chr14:1868473-1868174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 5
               

               
Conread position:
               
60-440
               

               
Cow position:
               
chr14:19129416-19129796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 13
               

               
Conread position:
               
60-627
               

               
Cow position:
               
chr14:37884008-37883436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
585
               

               
Alignm identity:
               
453
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 196
               

               
Conread position:
               
61-307
               

               
Cow position:
               
chr14:32553397-32553153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
12, 128
               

               
Conread position:
               
61-405
               

               
Cow position:
               
chr14:1978162-1977828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 14
               

               
Conread position:
               
61-453
               

               
Cow position:
               
chr14:37131573-37131957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 12
               

               
Conread position:
               
61-465
               

               
Cow position:
               
chr14:7582538-7582130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
45, 6
               

               
Conread position:
               
62-473
               

               
Cow position:
               
chr14:45069152-45068769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
39, 11
               

               
Conread position:
               
63-220
               

               
Cow position:
               
chr14:34399885-34399726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
33, 10
               

               
Conread position:
               
63-254
               

               
Cow position:
               
chr14:34449058-34448864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
33, 10
               

               
Conread position:
               
63-310
               

               
Cow position:
               
chr14:19951477-19951729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
10, 169
               

               
Conread position:
               
63-409
               

               
Cow position:
               
chr14:40283531-40283875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
37, 10
               

               
Conread position:
               
63-629
               

               
Cow position:
               
chr14:14316800-14317369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
599
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 10
               

               
Conread position:
               
63-629
               

               
Cow position:
               
chr14:20600298-20600868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
587
               

               
Alignm identity:
               
446
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 10
               

               
Conread position:
               
64-370
               

               
Cow position:
               
chr14:15825193-15825503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
9, 123
               

               
Conread position:
               
65-303
               

               
Cow position:
               
chr14:6226698-6226474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
33, 9
               

               
Conread position:
               
65-367
               

               
Cow position:
               
chr14:19394274-19394574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 73
               

               
Conread position:
               
65-388
               

               
Cow position:
               
chr14:26490833-26490510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 161
               

               
Conread position:
               
65-629
               

               
Cow position:
               
chr14:27312328-27312920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
601
               

               
Alignm identity:
               
435
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 8
               

               
Conread position:
               
68-578
               

               
Cow position:
               
chr14:39807540-39807031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 19
               

               
Conread position:
               
69-462
               

               
Cow position:
               
chr14:11615301-11614909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 26
               

               
Conread position:
               
72-464
               

               
Cow position:
               
chr14:23107243-23107636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
15, 135
               

               
Conread position:
               
72-530
               

               
Cow position:
               
chr14:35700349-35700806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 86
               

               
Conread position:
               
72-629
               

               
Cow position:
               
chr14:21964058-21964598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
433
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 85
               

               
Conread position:
               
75-578
               

               
Cow position:
               
chr14:27592032-27591518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 64
               

               
Conread position:
               
76-171
               

               
Cow position:
               
chr14:13176257-13176160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
98
               

               
Alignm identity:
               
82
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
76-254
               

               
Cow position:
               
chr14:50146805-50146982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
18, 64
               

               
Conread position:
               
76-281
               

               
Cow position:
               
chr14:23478752-23478951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
25, 80
               

               
Conread position:
               
76-327
               

               
Cow position:
               
chr14:46997964-46998221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
25, 150
               

               
Conread position:
               
76-344
               

               
Cow position:
               
chr14:46654616-46654351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
42, 86
               

               
Conread position:
               
76-363
               

               
Cow position:
               
chr14:16256684-16256977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
25, 191
               

               
Conread position:
               
76-368
               

               
Cow position:
               
chr14:27275088-27275384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 77
               

               
Conread position:
               
76-404
               

               
Cow position:
               
chr14:39037151-39037479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 56
               

               
Conread position:
               
76-421
               

               
Cow position:
               
chr14:19372264-19372610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 228
               

               
Conread position:
               
76-606
               

               
Cow position:
               
chr14:19863509-19862982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 143
               

               
Conread position:
               
77-464
               

               
Cow position:
               
chr14:14187257-14187643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 87
               

               
Conread position:
               
77-629
               

               
Cow position:
               
chr14:22381647-22381072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
587
               

               
Alignm identity:
               
441
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 164
               

               
Conread position:
               
78-469
               

               
Cow position:
               
chr14:4109563-4109159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 82
               

               
Conread position:
               
80-251
               

               
Cow position:
               
chr14:15039684-15039510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
14, 107
               

               
Conread position:
               
80-289
               

               
Cow position:
               
chr14:20045480-20045690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
26, 52
               

               
Conread position:
               
80-302
               

               
Cow position:
               
chr14:41253063-41252837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
20, 77
               

               
Conread position:
               
80-445
               

               
Cow position:
               
chr14:17841362-17840997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 227
               

               
Conread position:
               
80-456
               

               
Cow position:
               
chr14:38355117-38355485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 104
               

               
Conread position:
               
80-465
               

               
Cow position:
               
chr14:16834251-16834641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 285
               

               
Conread position:
               
80-465
               

               
Cow position:
               
chr14:37679074-37678685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 52
               

               
Conread position:
               
80-626
               

               
Cow position:
               
chr14:21018043-21018596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 51
               

               
Conread position:
               
80-629
               

               
Cow position:
               
chr14:25385957-25385404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 73
               

               
Conread position:
               
81-362
               

               
Cow position:
               
chr14:48961512-48961789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
13, 81
               

               
Conread position:
               
81-411
               

               
Cow position:
               
chr14:33309573-33309252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 134
               

               
Conread position:
               
81-465
               

               
Cow position:
               
chr14:44878841-44878475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
18, 72
               

               
Conread position:
               
81-619
               

               
Cow position:
               
chr14:36555216-36554686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
432
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 38
               

               
Conread position:
               
82-279
               

               
Cow position:
               
chr14:8470525-8470318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
82-461
               

               
Cow position:
               
chr14:35018822-35018449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 173
               

               
Conread position:
               
82-629
               

               
Cow position:
               
chr14:25779033-25779584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
435
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 104
               

               
Conread position:
               
83-255
               

               
Cow position:
               
chr14:25399001-25399178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
20, 149
               

               
Conread position:
               
83-464
               

               
Cow position:
               
chr14:48412950-48412565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 138
               

               
Conread position:
               
84-426
               

               
Cow position:
               
chr14:50055332-50055673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 127
               

               
Conread position:
               
85-434
               

               
Cow position:
               
chr14:34355776-34355421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
16, 159
               

               
Conread position:
               
86-221
               

               
Cow position:
               
chr14:21019207-21019343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
13, 45
               

               
Conread position:
               
86-461
               

               
Cow position:
               
chr14:5835847-5836211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 65
               

               
Conread position:
               
88-412
               

               
Cow position:
               
chr14:20385048-20384723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 132
               

               
Conread position:
               
88-460
               

               
Cow position:
               
chr14:36709061-36709428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 92
               

               
Conread position:
               
88-618
               

               
Cow position:
               
chr14:8784138-8784646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 31
               

               
Conread position:
               
88-629
               

               
Cow position:
               
chr14:41180776-41180239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 222
               

               
Conread position:
               
89-220
               

               
Cow position:
               
chr14:33643898-33644029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
19, 95
               

               
Conread position:
               
89-225
               

               
Cow position:
               
chr14:24839719-24839858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
89-417
               

               
Cow position:
               
chr14:40432864-40433184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 45
               

               
Conread position:
               
89-629
               

               
Cow position:
               
chr14:39778690-39779228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 195
               

               
Conread position:
               
92-275
               

               
Cow position:
               
chr14:49767405-49767588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
23, 169
               

               
Conread position:
               
92-629
               

               
Cow position:
               
chr14:25403993-25403465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 128
               

               
Conread position:
               
96-232
               

               
Cow position:
               
chr14:3665751-3665894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
16, 128
               

               
Conread position:
               
96-484
               

               
Cow position:
               
chr14:25362289-25362681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
10, 37
               

               
Conread position:
               
99-452
               

               
Cow position:
               
chr14:25378545-25378187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 6
               

               
Conread position:
               
100-473
               

               
Cow position:
               
chr14:22966706-22967070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 119
               

               
Conread position:
               
105-290
               

               
Cow position:
               
chr14:32018064-32018257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
13, 148
               

               
Conread position:
               
105-411
               

               
Cow position:
               
chr14:33338518-33338223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
131, 59
               

               
Conread position:
               
105-578
               

               
Cow position:
               
chr14:34221016-34221485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
271, 40
               

               
Conread position:
               
106-438
               

               
Cow position:
               
chr14:3436948-3437275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
50, 23
               

               
Conread position:
               
109-614
               

               
Cow position:
               
chr14:106606-106119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
200, 99
               

               
Conread position:
               
110-406
               

               
Cow position:
               
chr14:29029791-29030080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 40
               

               
Conread position:
               
112-251
               

               
Cow position:
               
chr14:46061906-46062048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
112-374
               

               
Cow position:
               
chr14:32732716-32732977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
106, 45
               

               
Conread position:
               
112-390
               

               
Cow position:
               
chr14:26191140-26190860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 174
               

               
Conread position:
               
112-496
               

               
Cow position:
               
chr14:40269877-40269496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
322, 65
               

               
Conread position:
               
112-528
               

               
Cow position:
               
chr14:20468131-20467733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 105
               

               
Conread position:
               
113-462
               

               
Cow position:
               
chr14:3564249-3564581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
259, 100
               

               
Conread position:
               
117-219
               

               
Cow position:
               
chr14:26499574-26499676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
103
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
123-219
               

               
Cow position:
               
chr14:18717248-18717344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
97
               

               
Alignm identity:
               
81
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
126-464
               

               
Cow position:
               
chr14:47591936-47591611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
130-456
               

               
Cow position:
               
chr14:25231668-25231347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 177
               

               
Conread position:
               
135-267
               

               
Cow position:
               
chr14:33568972-33569100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
137-464
               

               
Cow position:
               
chr14:15032745-15033066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 15
               

               
Conread position:
               
138-347
               

               
Cow position:
               
chr14:11275595-11275376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
45, 91
               

               
Conread position:
               
139-247
               

               
Cow position:
               
chr14:11073871-11073978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
139-629
               

               
Cow position:
               
chr14:33538945-33538446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 205
               

               
Conread position:
               
140-629
               

               
Cow position:
               
chr14:24893760-24894239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 80
               

               
Conread position:
               
147-414
               

               
Cow position:
               
chr14:15514012-15514279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
83, 38
               

               
Conread position:
               
149-540
               

               
Cow position:
               
chr14:33828163-33828537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
281, 69
               

               
Conread position:
               
150-627
               

               
Cow position:
               
chr14:31734853-31734376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 66
               

               
Conread position:
               
150-629
               

               
Cow position:
               
chr14:7558439-7557958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 169
               

               
Conread position:
               
150-629
               

               
Cow position:
               
chr14:23055616-23056086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
280, 20
               

               
Conread position:
               
153-628
               

               
Cow position:
               
chr14:9875404-9875866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 36
               

               
Conread position:
               
153-628
               

               
Cow position:
               
chr14:10912960-10912502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 44
               

               
Conread position:
               
155-526
               

               
Cow position:
               
chr14:8964556-8964926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 13
               

               
Conread position:
               
157-397
               

               
Cow position:
               
chr14:33643771-33643548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
219, 65
               

               
Conread position:
               
157-564
               

               
Cow position:
               
chr14:21284631-21285039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 81
               

               
Conread position:
               
157-623
               

               
Cow position:
               
chr14:35047584-35048052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 14
               

               
Conread position:
               
157-627
               

               
Cow position:
               
chr14:41756273-41756737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 54
               

               
Conread position:
               
158-446
               

               
Cow position:
               
chr14:41716126-41716399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
12, 122
               

               
Conread position:
               
158-624
               

               
Cow position:
               
chr14:46751682-46752131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
39, 132
               

               
Conread position:
               
159-629
               

               
Cow position:
               
chr14:38296271-38295810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 47
               

               
Conread position:
               
160-423
               

               
Cow position:
               
chr14:34697642-34697899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
73, 55
               

               
Conread position:
               
161-298
               

               
Cow position:
               
chr14:16932093-16932224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
135, 57
               

               
Conread position:
               
161-456
               

               
Cow position:
               
chr14:7482069-7482357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 57
               

               
Conread position:
               
162-378
               

               
Cow position:
               
chr14:14580883-14581092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
162-627
               

               
Cow position:
               
chr14:445420-445860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 108
               

               
Conread position:
               
163-293
               

               
Cow position:
               
chr14:20361741-20361613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
117, 63
               

               
Conread position:
               
163-419
               

               
Cow position:
               
chr14:35021908-35022166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
58, 38
               

               
Conread position:
               
163-523
               

               
Cow position:
               
chr14:37151645-37151265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 50
               

               
Conread position:
               
164-356
               

               
Cow position:
               
chr14:5667869-5667678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
104, 33
               

               
Conread position:
               
167-452
               

               
Cow position:
               
chr14:11820101-11819826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
209, 51
               

               
Conread position:
               
168-301
               

               
Cow position:
               
chr14:4044698-4044826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
168-416
               

               
Cow position:
               
chr14:20483437-20483205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
171-618
               

               
Cow position:
               
chr14:8754342-8754798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 134
               

               
Conread position:
               
174-345
               

               
Cow position:
               
chr14:38673605-38673438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
40, 8
               

               
Conread position:
               
174-362
               

               
Cow position:
               
chr14:50518941-50518763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
178, 16
               

               
Conread position:
               
174-435
               

               
Cow position:
               
chr14:24785971-24786214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
202, 40
               

               
Conread position:
               
174-465
               

               
Cow position:
               
chr14:11748882-11748611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 13
               

               
Conread position:
               
174-565
               

               
Cow position:
               
chr14:37624462-37624070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 31
               

               
Conread position:
               
174-578
               

               
Cow position:
               
chr14:19221904-19222312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 138
               

               
Conread position:
               
174-623
               

               
Cow position:
               
chr14:24991848-24992288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
246, 49
               

               
Conread position:
               
174-628
               

               
Cow position:
               
chr14:24580954-24581419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 67
               

               
Conread position:
               
176-427
               

               
Cow position:
               
chr14:39422565-39422315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 42
               

               
Conread position:
               
176-464
               

               
Cow position:
               
chr14:14280439-14280727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
40, 48
               

               
Conread position:
               
176-558
               

               
Cow position:
               
chr14:3878489-3878861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
244, 41
               

               
Conread position:
               
176-627
               

               
Cow position:
               
chr14:46490231-46489777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 50
               

               
Conread position:
               
176-629
               

               
Cow position:
               
chr14:40347133-40346696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
244, 47
               

               
Conread position:
               
177-325
               

               
Cow position:
               
chr14:26456538-26456683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
177-434
               

               
Cow position:
               
chr14:37435274-37435012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 99
               

               
Conread position:
               
177-564
               

               
Cow position:
               
chr14:29771803-29772186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 20
               

               
Conread position:
               
178-627
               

               
Cow position:
               
chr14:16305869-16306316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
238, 51
               

               
Conread position:
               
179-590
               

               
Cow position:
               
chr14:12250165-12249758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 45
               

               
Conread position:
               
180-618
               

               
Cow position:
               
chr14:11981669-11982124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 186
               

               
Conread position:
               
181-325
               

               
Cow position:
               
chr14:37467729-37467588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
181-373
               

               
Cow position:
               
chr14:26627864-26628055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
55, 21
               

               
Conread position:
               
182-483
               

               
Cow position:
               
chr14:37934578-37934278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 28
               

               
Conread position:
               
183-335
               

               
Cow position:
               
chr14:19513378-19513236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
187-629
               

               
Cow position:
               
chr14:6419263-6418828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 37
               

               
Conread position:
               
189-457
               

               
Cow position:
               
chr14:35712139-35711877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
36, 10
               

               
Conread position:
               
190-406
               

               
Cow position:
               
chr14:10721686-10721483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
186, 27
               

               
Conread position:
               
202-379
               

               
Cow position:
               
chr14:41654348-41654171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
16, 76
               

               
Conread position:
               
205-394
               

               
Cow position:
               
chr14:22952936-22952758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
210-473
               

               
Cow position:
               
chr14:26880746-26880487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
220, 16
               

               
Conread position:
               
210-619
               

               
Cow position:
               
chr14:194003-193595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 30
               

               
Conread position:
               
211-450
               

               
Cow position:
               
chr14:36151468-36151688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
212-350
               

               
Cow position:
               
chr14:42277006-42277147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
21, 129
               

               
Conread position:
               
215-352
               

               
Cow position:
               
chr14:17563972-17564110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
94, 18
               

               
Conread position:
               
223-627
               

               
Cow position:
               
chr14:44252983-44253376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
153, 63
               

               
Conread position:
               
223-629
               

               
Cow position:
               
chr14:12614021-12613653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
226-454
               

               
Cow position:
               
chr14:19624161-19624390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 85
               

               
Conread position:
               
227-386
               

               
Cow position:
               
chr14:28924462-28924617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
149, 84
               

               
Conread position:
               
227-577
               

               
Cow position:
               
chr14:34395596-34395241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 59
               

               
Conread position:
               
229-629
               

               
Cow position:
               
chr14:12484221-12483831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 81
               

               
Conread position:
               
234-507
               

               
Cow position:
               
chr14:7316911-7317195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 33
               

               
Conread position:
               
234-627
               

               
Cow position:
               
chr14:46735388-46735796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 212
               

               
Conread position:
               
235-629
               

               
Cow position:
               
chr14:5502077-5501670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 212
               

               
Conread position:
               
236-465
               

               
Cow position:
               
chr14:19996402-19996629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
73, 132
               

               
Conread position:
               
237-629
               

               
Cow position:
               
chr14:39518782-39519188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 10
               

               
Conread position:
               
238-407
               

               
Cow position:
               
chr14:6636808-6636639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
137, 73
               

               
Conread position:
               
239-352
               

               
Cow position:
               
chr14:8936562-8936448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
239-440
               

               
Cow position:
               
chr14:8006238-8006051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
181, 86
               

               
Conread position:
               
242-407
               

               
Cow position:
               
chr14:26470719-26470882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
67, 106
               

               
Conread position:
               
248-473
               

               
Cow position:
               
chr14:11641472-11641257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
127, 55
               

               
Conread position:
               
258-456
               

               
Cow position:
               
chr14:34330652-34330841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
139, 46
               

               
Conread position:
               
261-418
               

               
Cow position:
               
chr14:24840065-24839914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
261-599
               

               
Cow position:
               
chr14:9029566-9029233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 43
               

               
Conread position:
               
269-533
               

               
Cow position:
               
chr14:1796409-1796676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
107, 76
               

               
Conread position:
               
269-611
               

               
Cow position:
               
chr14:25695499-25695832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 82
               

               
Conread position:
               
270-396
               

               
Cow position:
               
chr14:49037462-49037333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
35, 69
               

               
Conread position:
               
271-629
               

               
Cow position:
               
chr14:27866017-27865656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 175
               

               
Conread position:
               
272-629
               

               
Cow position:
               
chr14:21534913-21534565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 38
               
Show alignments to all cow chromosomes.