Non-Coding RNA Search

Cow genome map


           Conread name:
           rnca33b_d16.y1
        

               Conread position:
               1-110
               

               Cow position:
               chr15:36904201-36904313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               95
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               1-113
               

               Cow position:
               chr15:37237566-37237679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               91
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               1-127
               

               Cow position:
               chr15:43590111-43590241 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               101
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               1-134
               

               Cow position:
               chr15:41348269-41348407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               109
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               1-139
               

               Cow position:
               chr15:20906130-20905994 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               108
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               95, 67
               

               Conread position:
               1-141
               

               Cow position:
               chr15:38228034-38228177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               1-143
               

               Cow position:
               chr15:26380848-26380702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               119
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               1-143
               

               Cow position:
               chr15:52997105-52996957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               1-144
               

               Cow position:
               chr15:27657000-27657148 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               1-147
               

               Cow position:
               chr15:15680945-15680795 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               1-147
               

               Cow position:
               chr15:22242301-22242450 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               118
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               1-150
               

               Cow position:
               chr15:25696400-25696248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               113
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               81, 69
               

               Conread position:
               1-151
               

               Cow position:
               chr15:30956425-30956273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               71, 86
               

               Conread position:
               1-153
               

               Cow position:
               chr15:40494575-40494420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               1-154
               

               Cow position:
               chr15:18704034-18703882 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               122
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               89, 71
               

               Conread position:
               1-154
               

               Cow position:
               chr15:18941933-18942083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               92, 51
               

               Conread position:
               1-155
               

               Cow position:
               chr15:20566027-20566185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               1-155
               

               Cow position:
               chr15:27555755-27555596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               122
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               1-158
               

               Cow position:
               chr15:840248-840091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               99, 69
               

               Conread position:
               1-158
               

               Cow position:
               chr15:26127934-26127769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               125
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               1-162
               

               Cow position:
               chr15:43020741-43020568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               1-163
               

               Cow position:
               chr15:17227030-17226861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               1-163
               

               Cow position:
               chr15:25366166-25366001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               61, 73
               

               Conread position:
               1-165
               

               Cow position:
               chr15:3026906-3026733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               131
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               1-167
               

               Cow position:
               chr15:40562784-40562616 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               72, 78
               

               Conread position:
               1-169
               

               Cow position:
               chr15:12764905-12764731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               1-169
               

               Cow position:
               chr15:40844722-40844552 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               72, 88
               

               Conread position:
               1-172
               

               Cow position:
               chr15:12913600-12913427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               99, 71
               

               Conread position:
               1-175
               

               Cow position:
               chr15:5964214-5964032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               57, 158
               

               Conread position:
               1-175
               

               Cow position:
               chr15:36539843-36540015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               125
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               72, 81
               

               Conread position:
               1-175
               

               Cow position:
               chr15:50163014-50163184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               91, 67
               

               Conread position:
               1-178
               

               Cow position:
               chr15:41321053-41320876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               139
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               93, 58
               

               Conread position:
               1-179
               

               Cow position:
               chr15:20566816-20566990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               99, 62
               

               Conread position:
               1-180
               

               Cow position:
               chr15:21942951-21943134 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               1-181
               

               Cow position:
               chr15:25358132-25358315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               1-182
               

               Cow position:
               chr15:12974233-12974420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               137
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               1-183
               

               Cow position:
               chr15:11564198-11564378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               92, 22
               

               Conread position:
               1-183
               

               Cow position:
               chr15:44809965-44810151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               138
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               1-184
               

               Cow position:
               chr15:16246493-16246679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               71, 78
               

               Conread position:
               1-184
               

               Cow position:
               chr15:25451900-25452093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               1-185
               

               Cow position:
               chr15:41475928-41475746 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               99, 66
               

               Conread position:
               1-185
               

               Cow position:
               chr15:43715229-43715411 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               99, 67
               

               Conread position:
               1-187
               

               Cow position:
               chr15:848546-848733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               94, 22
               

               Conread position:
               1-187
               

               Cow position:
               chr15:4334011-4333837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               149
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               72, 9
               

               Conread position:
               1-187
               

               Cow position:
               chr15:25877339-25877528 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               71, 20
               

               Conread position:
               1-187
               

               Cow position:
               chr15:51315965-51316157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               1-188
               

               Cow position:
               chr15:2522513-2522691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               93, 67
               

               Conread position:
               1-188
               

               Cow position:
               chr15:40082887-40083076 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               108, 67
               

               Conread position:
               1-190
               

               Cow position:
               chr15:17124572-17124379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               158
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               1-190
               

               Cow position:
               chr15:26617834-26618027 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               145
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               72, 181
               

               Conread position:
               1-190
               

               Cow position:
               chr15:37069989-37069797 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               137
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               1-190
               

               Cow position:
               chr15:48373027-48372833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               78, 32
               

               Conread position:
               1-190
               

               Cow position:
               chr15:52791839-52792026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               72, 110
               

               Conread position:
               1-192
               

               Cow position:
               chr15:4500597-4500796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               1-192
               

               Cow position:
               chr15:25595628-25595437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               153
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               81, 35
               

               Conread position:
               1-192
               

               Cow position:
               chr15:34223766-34223957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               9, 30
               

               Conread position:
               1-192
               

               Cow position:
               chr15:35419695-35419503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               30, 129
               

               Conread position:
               1-193
               

               Cow position:
               chr15:44089266-44089071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               72, 191
               

               Conread position:
               1-194
               

               Cow position:
               chr15:6082701-6082505 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               71, 191
               

               Conread position:
               1-194
               

               Cow position:
               chr15:7811632-7811437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               143
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               72, 187
               

               Conread position:
               1-204
               

               Cow position:
               chr15:38820601-38820798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               152
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               99, 59
               

               Conread position:
               1-204
               

               Cow position:
               chr15:40490246-40490040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               71, 132
               

               Conread position:
               1-206
               

               Cow position:
               chr15:31613839-31614047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               20, 7
               

               Conread position:
               1-207
               

               Cow position:
               chr15:19002384-19002170 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               1-207
               

               Cow position:
               chr15:44671441-44671229 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               54, 23
               

               Conread position:
               1-208
               

               Cow position:
               chr15:19976446-19976659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               156
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               72, 183
               

               Conread position:
               1-208
               

               Cow position:
               chr15:39474036-39473828 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               167
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               72, 151
               

               Conread position:
               1-209
               

               Cow position:
               chr15:21363054-21362847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               157
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               108, 67
               

               Conread position:
               1-213
               

               Cow position:
               chr15:26442113-26442327 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               165
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               90, 66
               

               Conread position:
               1-216
               

               Cow position:
               chr15:10880982-10880769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               154
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               58, 48
               

               Conread position:
               1-216
               

               Cow position:
               chr15:26851325-26851111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               99, 67
               

               Conread position:
               1-219
               

               Cow position:
               chr15:24462421-24462645 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               1-220
               

               Cow position:
               chr15:28957241-28957463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               153
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               71, 190
               

               Conread position:
               1-220
               

               Cow position:
               chr15:31495319-31495105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               171
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               100, 50
               

               Conread position:
               1-220
               

               Cow position:
               chr15:49131958-49132176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               99, 67
               

               Conread position:
               1-221
               

               Cow position:
               chr15:49784382-49784165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               159
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               100, 67
               

               Conread position:
               1-222
               

               Cow position:
               chr15:49491551-49491765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               172
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               1-224
               

               Cow position:
               chr15:50332874-50333103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               71, 154
               

               Conread position:
               1-231
               

               Cow position:
               chr15:32984479-32984711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               89, 211
               

               Conread position:
               1-232
               

               Cow position:
               chr15:12546340-12546096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               71, 229
               

               Conread position:
               1-232
               

               Cow position:
               chr15:31637194-31637432 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               179
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               1-233
               

               Cow position:
               chr15:8679860-8679626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               71, 189
               

               Conread position:
               1-234
               

               Cow position:
               chr15:24453175-24452942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               168
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               88, 22
               

               Conread position:
               1-240
               

               Cow position:
               chr15:23719604-23719344 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               189
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               1-242
               

               Cow position:
               chr15:36388198-36388431 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 16
               

               Conread position:
               1-244
               

               Cow position:
               chr15:38861997-38862230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               178
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               72, 23
               

               Conread position:
               1-247
               

               Cow position:
               chr15:31416272-31416021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               171
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               71, 125
               

               Conread position:
               1-248
               

               Cow position:
               chr15:20950151-20950395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               183
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               72, 159
               

               Conread position:
               1-249
               

               Cow position:
               chr15:40015106-40014854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               1-251
               

               Cow position:
               chr15:3695536-3695782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               109, 70
               

               Conread position:
               1-251
               

               Cow position:
               chr15:38860233-38859981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               72, 183
               

               Conread position:
               1-251
               

               Cow position:
               chr15:52316959-52317206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               121, 67
               

               Conread position:
               1-254
               

               Cow position:
               chr15:19554027-19553772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 86
               

               Conread position:
               1-255
               

               Cow position:
               chr15:19942496-19942751 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               92, 67
               

               Conread position:
               1-256
               

               Cow position:
               chr15:38827416-38827172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 65
               

               Conread position:
               1-258
               

               Cow position:
               chr15:50660501-50660785 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               201
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               1-259
               

               Cow position:
               chr15:31042781-31043023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               114, 57
               

               Conread position:
               1-276
               

               Cow position:
               chr15:10442612-10442331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               200
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               64, 190
               

               Conread position:
               1-278
               

               Cow position:
               chr15:23901478-23901190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               201
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               64, 245
               

               Conread position:
               1-279
               

               Cow position:
               chr15:27230662-27230938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               200
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               71, 22
               

               Conread position:
               1-279
               

               Cow position:
               chr15:41528067-41527802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 35
               

               Conread position:
               1-282
               

               Cow position:
               chr15:50552635-50552350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               205
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               72, 129
               

               Conread position:
               1-284
               

               Cow position:
               chr15:39833079-39832795 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               72, 139
               

               Conread position:
               1-285
               

               Cow position:
               chr15:25349873-25350147 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 60
               

               Conread position:
               1-285
               

               Cow position:
               chr15:36846288-36845992 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               210
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               73, 169
               

               Conread position:
               1-291
               

               Cow position:
               chr15:5719906-5719621 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               207
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               28, 50
               

               Conread position:
               1-293
               

               Cow position:
               chr15:52126791-52126504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               207
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               95, 74
               

               Conread position:
               1-295
               

               Cow position:
               chr15:28047862-28047563 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               228
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               76, 26
               

               Conread position:
               1-300
               

               Cow position:
               chr15:40231017-40231315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               205
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               71, 194
               

               Conread position:
               1-301
               

               Cow position:
               chr15:33693473-33693165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               217
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               72, 235
               

               Conread position:
               1-302
               

               Cow position:
               chr15:19950385-19950672 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 38
               

               Conread position:
               1-303
               

               Cow position:
               chr15:37865259-37865565 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               58, 9
               

               Conread position:
               1-307
               

               Cow position:
               chr15:36643947-36643653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               227
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               97, 27
               

               Conread position:
               1-308
               

               Cow position:
               chr15:6233116-6232811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               222
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               94, 63
               

               Conread position:
               1-316
               

               Cow position:
               chr15:5408995-5408700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               231
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               92, 71
               

               Conread position:
               1-321
               

               Cow position:
               chr15:33178527-33178209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               227
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               30, 59
               

               Conread position:
               1-321
               

               Cow position:
               chr15:51307771-51307464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               217
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               88, 56
               

               Conread position:
               1-325
               

               Cow position:
               chr15:8604118-8604441 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               230
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               73, 25
               

               Conread position:
               1-325
               

               Cow position:
               chr15:23866170-23865848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 12
               

               Conread position:
               1-329
               

               Cow position:
               chr15:31928999-31928673 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 73
               

               Conread position:
               1-332
               

               Cow position:
               chr15:49273861-49274178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 66
               

               Conread position:
               1-332
               

               Cow position:
               chr15:53716333-53716659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               221
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               109, 71
               

               Conread position:
               1-334
               

               Cow position:
               chr15:10231844-10231513 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               238
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               110, 72
               

               Conread position:
               1-346
               

               Cow position:
               chr15:22930451-22930099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 40
               

               Conread position:
               1-346
               

               Cow position:
               chr15:38037046-38036698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               235
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               94, 19
               

               Conread position:
               1-348
               

               Cow position:
               chr15:28823913-28823579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 25
               

               Conread position:
               1-353
               

               Cow position:
               chr15:18975864-18975518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               244
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               88, 22
               

               Conread position:
               1-358
               

               Cow position:
               chr15:16261229-16261566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               242
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               99, 71
               

               Conread position:
               1-368
               

               Cow position:
               chr15:11560616-11560251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 10
               

               Conread position:
               1-369
               

               Cow position:
               chr15:16657369-16657757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               391
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 243
               

               Conread position:
               1-373
               

               Cow position:
               chr15:18323048-18322662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               261
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               72, 264
               

               Conread position:
               1-373
               

               Cow position:
               chr15:20279499-20279129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               237
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               111, 90
               

               Conread position:
               1-373
               

               Cow position:
               chr15:20286098-20285728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               238
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               76, 111
               

               Conread position:
               1-374
               

               Cow position:
               chr15:275542-275912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               390
               

               Alignm identity:
               270
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               46, 83
               

               Conread position:
               1-381
               

               Cow position:
               chr15:85347-84974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               385
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 76
               

               Conread position:
               1-386
               

               Cow position:
               chr15:32324309-32323927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               392
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 156
               

               Conread position:
               1-389
               

               Cow position:
               chr15:41045301-41045686 (view UCSC Genome Browser custom track)
               

               Alignm length:
               397
               

               Alignm identity:
               271
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               72, 79
               

               Conread position:
               1-391
               

               Cow position:
               chr15:244681-245057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               401
               

               Alignm identity:
               281
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               80, 33
               

               Conread position:
               1-395
               

               Cow position:
               chr15:31137566-31137174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               398
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 71
               

               Conread position:
               1-396
               

               Cow position:
               chr15:7456616-7456985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               396
               

               Alignm identity:
               273
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               1-396
               

               Cow position:
               chr15:16667599-16667211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               403
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 132
               

               Conread position:
               1-397
               

               Cow position:
               chr15:21822028-21821631 (view UCSC Genome Browser custom track)
               

               Alignm length:
               404
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 218
               

               Conread position:
               1-397
               

               Cow position:
               chr15:39373556-39373140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               419
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 236
               

               Conread position:
               1-401
               

               Cow position:
               chr15:2968233-2968626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               405
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 172
               

               Conread position:
               1-407
               

               Cow position:
               chr15:5072199-5071801 (view UCSC Genome Browser custom track)
               

               Alignm length:
               423
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 188
               

               Conread position:
               1-409
               

               Cow position:
               chr15:26919370-26918972 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 35
               

               Conread position:
               1-411
               

               Cow position:
               chr15:1722942-1722548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               416
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 64
               

               Conread position:
               1-412
               

               Cow position:
               chr15:44658265-44658664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               413
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 69
               

               Conread position:
               1-418
               

               Cow position:
               chr15:11996129-11995715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               421
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 72
               

               Conread position:
               1-428
               

               Cow position:
               chr15:27900606-27900184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               437
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 39
               

               Conread position:
               1-431
               

               Cow position:
               chr15:39598144-39598561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               434
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 72
               

               Conread position:
               1-434
               

               Cow position:
               chr15:12304538-12304968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               440
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 72
               

               Conread position:
               1-439
               

               Cow position:
               chr15:22938868-22938445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               446
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 224
               

               Conread position:
               1-440
               

               Cow position:
               chr15:26158700-26158285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 158
               

               Conread position:
               1-447
               

               Cow position:
               chr15:10246096-10245670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               451
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 79
               

               Conread position:
               1-448
               

               Cow position:
               chr15:29810024-29810449 (view UCSC Genome Browser custom track)
               

               Alignm length:
               452
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 52
               

               Conread position:
               1-450
               

               Cow position:
               chr15:8665708-8665240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               474
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 384
               

               Conread position:
               1-450
               

               Cow position:
               chr15:29353656-29353214 (view UCSC Genome Browser custom track)
               

               Alignm length:
               459
               

               Alignm identity:
               287
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               62, 144
               

               Conread position:
               1-452
               

               Cow position:
               chr15:51460135-51460571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               461
               

               Alignm identity:
               308
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               72, 176
               

               Conread position:
               1-454
               

               Cow position:
               chr15:21803766-21803311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               466
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 162
               

               Conread position:
               1-454
               

               Cow position:
               chr15:34478587-34479029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               465
               

               Alignm identity:
               314
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               69, 221
               

               Conread position:
               1-455
               

               Cow position:
               chr15:39405641-39406081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               460
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 88
               

               Conread position:
               1-456
               

               Cow position:
               chr15:6462594-6462154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               460
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 73
               

               Conread position:
               1-456
               

               Cow position:
               chr15:35641911-35642368 (view UCSC Genome Browser custom track)
               

               Alignm length:
               468
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 124
               

               Conread position:
               1-459
               

               Cow position:
               chr15:5729855-5730288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               463
               

               Alignm identity:
               313
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               28, 76
               

               Conread position:
               1-459
               

               Cow position:
               chr15:22531572-22532012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               464
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 71
               

               Conread position:
               1-460
               

               Cow position:
               chr15:21893679-21894134 (view UCSC Genome Browser custom track)
               

               Alignm length:
               466
               

               Alignm identity:
               368
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 71
               

               Conread position:
               1-461
               

               Cow position:
               chr15:21941949-21941496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               467
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 146
               

               Conread position:
               1-462
               

               Cow position:
               chr15:13846666-13846221 (view UCSC Genome Browser custom track)
               

               Alignm length:
               481
               

               Alignm identity:
               333
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               220, 56
               

               Conread position:
               1-463
               

               Cow position:
               chr15:39599348-39599795 (view UCSC Genome Browser custom track)
               

               Alignm length:
               469
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 25
               

               Conread position:
               1-464
               

               Cow position:
               chr15:24994612-24994172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               467
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 16
               

               Conread position:
               1-466
               

               Cow position:
               chr15:21366291-21365842 (view UCSC Genome Browser custom track)
               

               Alignm length:
               472
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 22
               

               Conread position:
               1-470
               

               Cow position:
               chr15:48851594-48851136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               480
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 151
               

               Conread position:
               1-470
               

               Cow position:
               chr15:51427927-51427460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               479
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 68
               

               Conread position:
               1-471
               

               Cow position:
               chr15:22553642-22553158 (view UCSC Genome Browser custom track)
               

               Alignm length:
               495
               

               Alignm identity:
               362
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 75
               

               Conread position:
               1-471
               

               Cow position:
               chr15:50322510-50322959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               473
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               373, 38
               

               Conread position:
               1-473
               

               Cow position:
               chr15:17084105-17084575 (view UCSC Genome Browser custom track)
               

               Alignm length:
               483
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 260
               

               Conread position:
               1-490
               

               Cow position:
               chr15:36259698-36259210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               503
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 49
               

               Conread position:
               1-564
               

               Cow position:
               chr15:20391378-20390827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               577
               

               Alignm identity:
               402
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 27
               

               Conread position:
               1-565
               

               Cow position:
               chr15:43626363-43626920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               576
               

               Alignm identity:
               448
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 222
               

               Conread position:
               1-579
               

               Cow position:
               chr15:20370553-20369994 (view UCSC Genome Browser custom track)
               

               Alignm length:
               587
               

               Alignm identity:
               457
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 67
               

               Conread position:
               1-579
               

               Cow position:
               chr15:46563578-46563000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               603
               

               Alignm identity:
               445
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 71
               

               Conread position:
               1-587
               

               Cow position:
               chr15:5571730-5571147 (view UCSC Genome Browser custom track)
               

               Alignm length:
               604
               

               Alignm identity:
               410
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 25
               

               Conread position:
               1-600
               

               Cow position:
               chr15:45478898-45479507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               615
               

               Alignm identity:
               454
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 267
               

               Conread position:
               1-611
               

               Cow position:
               chr15:10457129-10456490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               647
               

               Alignm identity:
               458
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 156
               

               Conread position:
               1-617
               

               Cow position:
               chr15:11658684-11658067 (view UCSC Genome Browser custom track)
               

               Alignm length:
               636
               

               Alignm identity:
               449
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 140
               

               Conread position:
               1-618
               

               Cow position:
               chr15:795118-794496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               638
               

               Alignm identity:
               485
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 64
               

               Conread position:
               1-623
               

               Cow position:
               chr15:45245642-45245033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               635
               

               Alignm identity:
               451
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 64
               

               Conread position:
               1-626
               

               Cow position:
               chr15:21608824-21608205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               639
               

               Alignm identity:
               464
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 221
               

               Conread position:
               1-626
               

               Cow position:
               chr15:31201901-31202530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               650
               

               Alignm identity:
               460
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 197
               

               Conread position:
               1-627
               

               Cow position:
               chr15:4919171-4918534 (view UCSC Genome Browser custom track)
               

               Alignm length:
               650
               

               Alignm identity:
               479
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 176
               

               Conread position:
               1-627
               

               Cow position:
               chr15:37381528-37382149 (view UCSC Genome Browser custom track)
               

               Alignm length:
               642
               

               Alignm identity:
               497
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 74
               

               Conread position:
               1-627
               

               Cow position:
               chr15:47821732-47822311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               633
               

               Alignm identity:
               449
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               496, 66
               

               Conread position:
               1-628
               

               Cow position:
               chr15:35839198-35838544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               666
               

               Alignm identity:
               462
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 232
               

               Conread position:
               1-629
               

               Cow position:
               chr15:1083471-1082859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               638
               

               Alignm identity:
               457
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 22
               

               Conread position:
               1-629
               

               Cow position:
               chr15:1301045-1301668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               641
               

               Alignm identity:
               461
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 115
               

               Conread position:
               1-629
               

               Cow position:
               chr15:1330210-1329578 (view UCSC Genome Browser custom track)
               

               Alignm length:
               641
               

               Alignm identity:
               484
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 219
               

               Conread position:
               1-629
               

               Cow position:
               chr15:6905438-6906080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               653
               

               Alignm identity:
               493
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 62
               

               Conread position:
               1-629
               

               Cow position:
               chr15:20390811-20390174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               648
               

               Alignm identity:
               464
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 22
               

               Conread position:
               1-629
               

               Cow position:
               chr15:20459412-20458774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               646
               

               Alignm identity:
               516
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 222
               

               Conread position:
               1-629
               

               Cow position:
               chr15:25208860-25208239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               643
               

               Alignm identity:
               471
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 68
               

               Conread position:
               1-629
               

               Cow position:
               chr15:25667326-25666687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               650
               

               Alignm identity:
               477
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 216
               

               Conread position:
               1-629
               

               Cow position:
               chr15:36391570-36392191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               641
               

               Alignm identity:
               476
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 220
               

               Conread position:
               1-629
               

               Cow position:
               chr15:36435101-36435732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               641
               

               Alignm identity:
               487
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 227
               

               Conread position:
               1-629
               

               Cow position:
               chr15:42142772-42143377 (view UCSC Genome Browser custom track)
               

               Alignm length:
               642
               

               Alignm identity:
               488
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 100
               

               Conread position:
               1-629
               

               Cow position:
               chr15:52778625-52778007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               638
               

               Alignm identity:
               432
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 132
               

               Conread position:
               2-110
               

               Cow position:
               chr15:20649465-20649575 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               91
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               2-124
               

               Cow position:
               chr15:11635317-11635435 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               91, 55
               

               Conread position:
               2-153
               

               Cow position:
               chr15:33729785-33729945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               2-160
               

               Cow position:
               chr15:36457717-36457564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               90, 66
               

               Conread position:
               2-171
               

               Cow position:
               chr15:46059256-46059432 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               2-174
               

               Cow position:
               chr15:16415196-16415370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               71, 24
               

               Conread position:
               2-178
               

               Cow position:
               chr15:9314626-9314803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               133
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               90, 75
               

               Conread position:
               2-186
               

               Cow position:
               chr15:28067806-28067627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               143
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               71, 21
               

               Conread position:
               2-187
               

               Cow position:
               chr15:21710209-21710021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               71, 9
               

               Conread position:
               2-188
               

               Cow position:
               chr15:5627137-5626947 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               2-189
               

               Cow position:
               chr15:34552991-34552801 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               70, 167
               

               Conread position:
               2-190
               

               Cow position:
               chr15:28099012-28099201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               98, 21
               

               Conread position:
               2-190
               

               Cow position:
               chr15:51793985-51794181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               146
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               55, 181
               

               Conread position:
               2-202
               

               Cow position:
               chr15:35577093-35577304 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               2-208
               

               Cow position:
               chr15:48095256-48095467 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               173
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               60, 164
               

               Conread position:
               2-209
               

               Cow position:
               chr15:16271350-16271562 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               56, 72
               

               Conread position:
               2-212
               

               Cow position:
               chr15:4248048-4248259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               96, 71
               

               Conread position:
               2-212
               

               Cow position:
               chr15:11909047-11908840 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               98, 70
               

               Conread position:
               2-215
               

               Cow position:
               chr15:18718562-18718344 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               70, 212
               

               Conread position:
               2-216
               

               Cow position:
               chr15:42380828-42381043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               74, 21
               

               Conread position:
               2-220
               

               Cow position:
               chr15:37970703-37970931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               2-231
               

               Cow position:
               chr15:8464233-8464002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               160
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               70, 217
               

               Conread position:
               2-246
               

               Cow position:
               chr15:28187334-28187574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               167
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               70, 131
               

               Conread position:
               2-249
               

               Cow position:
               chr15:15986993-15986737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               181
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               57, 225
               

               Conread position:
               2-249
               

               Cow position:
               chr15:31028760-31028510 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               69, 238
               

               Conread position:
               2-249
               

               Cow position:
               chr15:36635929-36636185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               55, 217
               

               Conread position:
               2-249
               

               Cow position:
               chr15:41053871-41053621 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               178
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               2-250
               

               Cow position:
               chr15:8127809-8128067 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               187
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               80, 232
               

               Conread position:
               2-273
               

               Cow position:
               chr15:41624997-41624717 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               208
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               71, 212
               

               Conread position:
               2-283
               

               Cow position:
               chr15:14281435-14281730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               205
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               38, 240
               

               Conread position:
               2-294
               

               Cow position:
               chr15:14474240-14474528 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               70, 213
               

               Conread position:
               2-328
               

               Cow position:
               chr15:24804900-24804566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               226
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               71, 211
               

               Conread position:
               2-365
               

               Cow position:
               chr15:23572789-23572419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 199
               

               Conread position:
               2-425
               

               Cow position:
               chr15:12722984-12723403 (view UCSC Genome Browser custom track)
               

               Alignm length:
               433
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 198
               

               Conread position:
               2-440
               

               Cow position:
               chr15:30001596-30002022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               445
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 67
               

               Conread position:
               2-465
               

               Cow position:
               chr15:16822850-16823293 (view UCSC Genome Browser custom track)
               

               Alignm length:
               468
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 16
               

               Conread position:
               2-473
               

               Cow position:
               chr15:36621300-36621783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               493
               

               Alignm identity:
               385
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 62
               

               Conread position:
               2-493
               

               Cow position:
               chr15:24128563-24129035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               502
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 25
               

               Conread position:
               2-507
               

               Cow position:
               chr15:8427912-8428410 (view UCSC Genome Browser custom track)
               

               Alignm length:
               525
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 21
               

               Conread position:
               2-537
               

               Cow position:
               chr15:16543538-16543029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               545
               

               Alignm identity:
               388
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 22
               

               Conread position:
               2-538
               

               Cow position:
               chr15:47990866-47990326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               549
               

               Alignm identity:
               399
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 114
               

               Conread position:
               2-560
               

               Cow position:
               chr15:20472644-20472087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               573
               

               Alignm identity:
               426
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 67
               

               Conread position:
               2-564
               

               Cow position:
               chr15:4789067-4788498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               588
               

               Alignm identity:
               414
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 84
               

               Conread position:
               2-574
               

               Cow position:
               chr15:30981852-30982386 (view UCSC Genome Browser custom track)
               

               Alignm length:
               582
               

               Alignm identity:
               410
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 32
               

               Conread position:
               2-584
               

               Cow position:
               chr15:32980134-32979548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               600
               

               Alignm identity:
               442
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 31
               

               Conread position:
               2-601
               

               Cow position:
               chr15:22532153-22532733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               607
               

               Alignm identity:
               453
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 71
               

               Conread position:
               2-601
               

               Cow position:
               chr15:51822050-51822640 (view UCSC Genome Browser custom track)
               

               Alignm length:
               613
               

               Alignm identity:
               421
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 218
               

               Conread position:
               2-618
               

               Cow position:
               chr15:4138034-4138647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               627
               

               Alignm identity:
               469
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 71
               

               Conread position:
               2-618
               

               Cow position:
               chr15:33284776-33285384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               629
               

               Alignm identity:
               457
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 35
               

               Conread position:
               2-627
               

               Cow position:
               chr15:4677098-4676478 (view UCSC Genome Browser custom track)
               

               Alignm length:
               643
               

               Alignm identity:
               457
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 72
               

               Conread position:
               2-627
               

               Cow position:
               chr15:24967701-24968313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               641
               

               Alignm identity:
               466
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 56
               

               Conread position:
               2-627
               

               Cow position:
               chr15:30985873-30985271 (view UCSC Genome Browser custom track)
               

               Alignm length:
               642
               

               Alignm identity:
               452
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 24
               

               Conread position:
               2-629
               

               Cow position:
               chr15:5235091-5234478 (view UCSC Genome Browser custom track)
               

               Alignm length:
               639
               

               Alignm identity:
               489
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 10
               

               Conread position:
               2-629
               

               Cow position:
               chr15:19402905-19403514 (view UCSC Genome Browser custom track)
               

               Alignm length:
               648
               

               Alignm identity:
               485
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 72
               

               Conread position:
               3-133
               

               Cow position:
               chr15:51831891-51831756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               3-138
               

               Cow position:
               chr15:27280538-27280676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               110
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               3-150
               

               Cow position:
               chr15:4284272-4284423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               3-154
               

               Cow position:
               chr15:15147307-15147161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               70, 103
               

               Conread position:
               3-157
               

               Cow position:
               chr15:32022416-32022261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               70, 111
               

               Conread position:
               3-164
               

               Cow position:
               chr15:38386487-38386652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               3-166
               

               Cow position:
               chr15:41049556-41049397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               90, 13
               

               Conread position:
               3-168
               

               Cow position:
               chr15:8715281-8715115 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               133
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               69, 20
               

               Conread position:
               3-171
               

               Cow position:
               chr15:21520043-21520221 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               3-172
               

               Cow position:
               chr15:52747427-52747594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               69, 49
               

               Conread position:
               3-175
               

               Cow position:
               chr15:48052697-48052530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               90, 20
               

               Conread position:
               3-179
               

               Cow position:
               chr15:7916664-7916484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               3-187
               

               Cow position:
               chr15:29927865-29928054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               150
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               70, 124
               

               Conread position:
               3-187
               

               Cow position:
               chr15:37719687-37719506 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               90, 69
               

               Conread position:
               3-188
               

               Cow position:
               chr15:17621420-17621235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               70, 155
               

               Conread position:
               3-190
               

               Cow position:
               chr15:9921863-9921679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               144
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               91, 14
               

               Conread position:
               3-192
               

               Cow position:
               chr15:12045640-12045446 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               152
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               3-192
               

               Cow position:
               chr15:16780842-16781020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               109, 27
               

               Conread position:
               3-192
               

               Cow position:
               chr15:44977714-44977907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               3-211
               

               Cow position:
               chr15:22444086-22443878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               170
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               70, 155
               

               Conread position:
               3-212
               

               Cow position:
               chr15:42353298-42353497 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               70, 84
               

               Conread position:
               3-213
               

               Cow position:
               chr15:17687406-17687628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               60, 97
               

               Conread position:
               3-216
               

               Cow position:
               chr15:1284162-1284387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               170
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               98, 70
               

               Conread position:
               3-216
               

               Cow position:
               chr15:2931670-2931451 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               60, 67
               

               Conread position:
               3-221
               

               Cow position:
               chr15:6037545-6037335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               90, 52
               

               Conread position:
               3-221
               

               Cow position:
               chr15:9979004-9979220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               171
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               93, 26
               

               Conread position:
               3-224
               

               Cow position:
               chr15:49483527-49483753 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               160
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               3-225
               

               Cow position:
               chr15:53028263-53028487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               92, 64
               

               Conread position:
               3-231
               

               Cow position:
               chr15:36949605-36949839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               70, 224
               

               Conread position:
               3-233
               

               Cow position:
               chr15:13432383-13432615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               76, 206
               

               Conread position:
               3-233
               

               Cow position:
               chr15:13701871-13701635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               3-247
               

               Cow position:
               chr15:34273699-34273946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               69, 228
               

               Conread position:
               3-247
               

               Cow position:
               chr15:40835016-40835258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               168
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               91, 65
               

               Conread position:
               3-248
               

               Cow position:
               chr15:14987896-14988136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               97, 55
               

               Conread position:
               3-251
               

               Cow position:
               chr15:11614194-11613942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               183
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               3-251
               

               Cow position:
               chr15:13783067-13782820 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               183
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               55, 127
               

               Conread position:
               3-255
               

               Cow position:
               chr15:15177218-15177466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               190
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               102, 38
               

               Conread position:
               3-255
               

               Cow position:
               chr15:19742358-19742591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               185
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               64, 20
               

               Conread position:
               3-263
               

               Cow position:
               chr15:42888934-42888678 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               195
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               70, 166
               

               Conread position:
               3-274
               

               Cow position:
               chr15:26522924-26522662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               70, 86
               

               Conread position:
               3-278
               

               Cow position:
               chr15:36952298-36952020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               97, 20
               

               Conread position:
               3-282
               

               Cow position:
               chr15:29541766-29542059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               213
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               52, 258
               

               Conread position:
               3-282
               

               Cow position:
               chr15:43114817-43114544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 69
               

               Conread position:
               3-299
               

               Cow position:
               chr15:36793591-36793297 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 17
               

               Conread position:
               3-306
               

               Cow position:
               chr15:40379113-40379414 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 150
               

               Conread position:
               3-310
               

               Cow position:
               chr15:35425891-35425606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               214
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               298, 62
               

               Conread position:
               3-325
               

               Cow position:
               chr15:30471078-30470750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 315
               

               Conread position:
               3-328
               

               Cow position:
               chr15:5158272-5158604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 72
               

               Conread position:
               3-328
               

               Cow position:
               chr15:20314383-20314711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               232
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               70, 143
               

               Conread position:
               3-331
               

               Cow position:
               chr15:1857627-1857953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 39
               

               Conread position:
               3-331
               

               Cow position:
               chr15:11987508-11987183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               231
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               70, 60
               

               Conread position:
               3-332
               

               Cow position:
               chr15:1502814-1503131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               224
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               97, 70
               

               Conread position:
               3-344
               

               Cow position:
               chr15:4418501-4418165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 224
               

               Conread position:
               3-346
               

               Cow position:
               chr15:286373-286719 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 263
               

               Conread position:
               3-346
               

               Cow position:
               chr15:4179038-4178698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 66
               

               Conread position:
               3-350
               

               Cow position:
               chr15:16017934-16018279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 236
               

               Conread position:
               3-361
               

               Cow position:
               chr15:18671548-18671192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 24
               

               Conread position:
               3-365
               

               Cow position:
               chr15:44377172-44377535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 9
               

               Conread position:
               3-366
               

               Cow position:
               chr15:36887740-36888084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               3-390
               

               Cow position:
               chr15:4862006-4861628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               393
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 218
               

               Conread position:
               3-396
               

               Cow position:
               chr15:2141421-2141007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               424
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 276
               

               Conread position:
               3-410
               

               Cow position:
               chr15:24031097-24031481 (view UCSC Genome Browser custom track)
               

               Alignm length:
               413
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 218
               

               Conread position:
               3-413
               

               Cow position:
               chr15:225902-225498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               417
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 70
               

               Conread position:
               3-414
               

               Cow position:
               chr15:8006879-8007287 (view UCSC Genome Browser custom track)
               

               Alignm length:
               419
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 140
               

               Conread position:
               3-418
               

               Cow position:
               chr15:47844187-47843797 (view UCSC Genome Browser custom track)
               

               Alignm length:
               420
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 15
               

               Conread position:
               3-423
               

               Cow position:
               chr15:49922036-49922455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               428
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 21
               

               Conread position:
               3-426
               

               Cow position:
               chr15:43674045-43673590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               463
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 46
               

               Conread position:
               3-432
               

               Cow position:
               chr15:14740786-14740344 (view UCSC Genome Browser custom track)
               

               Alignm length:
               448
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 130
               

               Conread position:
               3-434
               

               Cow position:
               chr15:17762808-17763226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               440
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 71
               

               Conread position:
               3-438
               

               Cow position:
               chr15:10088220-10088644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 63
               

               Conread position:
               3-439
               

               Cow position:
               chr15:41225671-41225231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               448
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 260
               

               Conread position:
               3-456
               

               Cow position:
               chr15:19771038-19771475 (view UCSC Genome Browser custom track)
               

               Alignm length:
               460
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 69
               

               Conread position:
               3-457
               

               Cow position:
               chr15:5683038-5683483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               469
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 128
               

               Conread position:
               3-464
               

               Cow position:
               chr15:17100803-17100360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               466
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 47
               

               Conread position:
               3-484
               

               Cow position:
               chr15:43914197-43913709 (view UCSC Genome Browser custom track)
               

               Alignm length:
               495
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 185
               

               Conread position:
               3-494
               

               Cow position:
               chr15:21420848-21421328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               497
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 23
               

               Conread position:
               3-537
               

               Cow position:
               chr15:22939423-22938910 (view UCSC Genome Browser custom track)
               

               Alignm length:
               541
               

               Alignm identity:
               395
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 70
               

               Conread position:
               3-537
               

               Cow position:
               chr15:26896798-26896286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               545
               

               Alignm identity:
               402
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 203
               

               Conread position:
               3-560
               

               Cow position:
               chr15:23798621-23798063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               576
               

               Alignm identity:
               439
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 65
               

               Conread position:
               3-617
               

               Cow position:
               chr15:16112295-16112924 (view UCSC Genome Browser custom track)
               

               Alignm length:
               634
               

               Alignm identity:
               483
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 222
               

               Conread position:
               3-627
               

               Cow position:
               chr15:38161901-38162533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               644
               

               Alignm identity:
               459
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 23
               

               Conread position:
               3-627
               

               Cow position:
               chr15:40798517-40797904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               639
               

               Alignm identity:
               469
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 24
               

               Conread position:
               3-628
               

               Cow position:
               chr15:24797902-24797270 (view UCSC Genome Browser custom track)
               

               Alignm length:
               654
               

               Alignm identity:
               486
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 66
               

               Conread position:
               3-629
               

               Cow position:
               chr15:608044-608683 (view UCSC Genome Browser custom track)
               

               Alignm length:
               651
               

               Alignm identity:
               493
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 224
               

               Conread position:
               3-629
               

               Cow position:
               chr15:7429867-7430510 (view UCSC Genome Browser custom track)
               

               Alignm length:
               650
               

               Alignm identity:
               476
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 232
               

               Conread position:
               3-629
               

               Cow position:
               chr15:16603731-16604358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               647
               

               Alignm identity:
               449
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 7
               

               Conread position:
               3-629
               

               Cow position:
               chr15:17233087-17233711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               639
               

               Alignm identity:
               471
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 223
               

               Conread position:
               3-629
               

               Cow position:
               chr15:20534552-20533922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               650
               

               Alignm identity:
               504
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 258
               

               Conread position:
               3-629
               

               Cow position:
               chr15:50957910-50957265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               653
               

               Alignm identity:
               493
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 219
               

               Conread position:
               4-173
               

               Cow position:
               chr15:8997192-8997370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               55, 157
               

               Conread position:
               4-198
               

               Cow position:
               chr15:14811115-14811313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               4-198
               

               Cow position:
               chr15:18763138-18762942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               66, 130
               

               Conread position:
               4-201
               

               Cow position:
               chr15:38420653-38420453 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               69, 161
               

               Conread position:
               4-220
               

               Cow position:
               chr15:38652701-38652482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               180
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               4-249
               

               Cow position:
               chr15:36776171-36776418 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               172
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               70, 133
               

               Conread position:
               4-255
               

               Cow position:
               chr15:16664183-16664442 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               69, 222
               

               Conread position:
               4-308
               

               Cow position:
               chr15:11424875-11425173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               214
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               13, 6
               

               Conread position:
               4-310
               

               Cow position:
               chr15:9465576-9465884 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 243
               

               Conread position:
               4-332
               

               Cow position:
               chr15:17337274-17337585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               227
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               95, 20
               

               Conread position:
               4-390
               

               Cow position:
               chr15:25906820-25907195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               398
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 68
               

               Conread position:
               4-393
               

               Cow position:
               chr15:16439932-16439540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               396
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 217
               

               Conread position:
               4-407
               

               Cow position:
               chr15:44436659-44437033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 26
               

               Conread position:
               4-440
               

               Cow position:
               chr15:31857491-31857925 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 44
               

               Conread position:
               4-464
               

               Cow position:
               chr15:40957480-40957935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               466
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 103
               

               Conread position:
               4-476
               

               Cow position:
               chr15:44051579-44051131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               476
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 69
               

               Conread position:
               4-492
               

               Cow position:
               chr15:5420980-5420517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               495
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 55
               

               Conread position:
               4-496
               

               Cow position:
               chr15:53101486-53101979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               505
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 220
               

               Conread position:
               4-520
               

               Cow position:
               chr15:4485050-4485562 (view UCSC Genome Browser custom track)
               

               Alignm length:
               534
               

               Alignm identity:
               401
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 194
               

               Conread position:
               4-532
               

               Cow position:
               chr15:3700381-3699854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               540
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 69
               

               Conread position:
               4-546
               

               Cow position:
               chr15:1055752-1056298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               558
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 222
               

               Conread position:
               4-550
               

               Cow position:
               chr15:49739114-49738599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               555
               

               Alignm identity:
               391
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               372, 54
               

               Conread position:
               4-590
               

               Cow position:
               chr15:27123633-27123061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               600
               

               Alignm identity:
               430
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 78
               

               Conread position:
               4-596
               

               Cow position:
               chr15:8579235-8578633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               618
               

               Alignm identity:
               436
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 131
               

               Conread position:
               5-145
               

               Cow position:
               chr15:12034792-12034641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               5-154
               

               Cow position:
               chr15:27975971-27975818 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               5-155
               

               Cow position:
               chr15:49230410-49230263 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               57, 78
               

               Conread position:
               5-169
               

               Cow position:
               chr15:43607061-43606893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               5-185
               

               Cow position:
               chr15:5691005-5691182 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               133
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               106, 67
               

               Conread position:
               5-188
               

               Cow position:
               chr15:41534557-41534737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               134
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               16, 64
               

               Conread position:
               5-216
               

               Cow position:
               chr15:27063614-27063406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               95, 14
               

               Conread position:
               5-233
               

               Cow position:
               chr15:41056306-41056072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               57, 18
               

               Conread position:
               5-282
               

               Cow position:
               chr15:29686465-29686731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               205
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               87, 18
               

               Conread position:
               5-291
               

               Cow position:
               chr15:10400372-10400083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               68, 224
               

               Conread position:
               5-316
               

               Cow position:
               chr15:5717622-5717921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 59
               

               Conread position:
               5-335
               

               Cow position:
               chr15:14576233-14576564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               237
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               95, 19
               

               Conread position:
               5-352
               

               Cow position:
               chr15:53037059-53036722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               244
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               104, 64
               

               Conread position:
               5-370
               

               Cow position:
               chr15:23275436-23275799 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 214
               

               Conread position:
               5-397
               

               Cow position:
               chr15:33642993-33643375 (view UCSC Genome Browser custom track)
               

               Alignm length:
               398
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 69
               

               Conread position:
               5-414
               

               Cow position:
               chr15:26903096-26903500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               419
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 69
               

               Conread position:
               5-435
               

               Cow position:
               chr15:35112970-35112560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               437
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 21
               

               Conread position:
               5-462
               

               Cow position:
               chr15:27973303-27972861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               461
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               310, 61
               

               Conread position:
               5-627
               

               Cow position:
               chr15:24616470-24617089 (view UCSC Genome Browser custom track)
               

               Alignm length:
               637
               

               Alignm identity:
               477
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 213
               

               Conread position:
               5-628
               

               Cow position:
               chr15:6969890-6970504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               631
               

               Alignm identity:
               469
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 18
               

               Conread position:
               5-629
               

               Cow position:
               chr15:43827869-43827249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               634
               

               Alignm identity:
               471
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 134
               

               Conread position:
               6-134
               

               Cow position:
               chr15:52166648-52166519 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               100
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               6-167
               

               Cow position:
               chr15:10332905-10333075 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               6-188
               

               Cow position:
               chr15:28603711-28603517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               6-207
               

               Cow position:
               chr15:921656-921851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               70, 30
               

               Conread position:
               6-211
               

               Cow position:
               chr15:26529799-26530000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               95, 67
               

               Conread position:
               6-301
               

               Cow position:
               chr15:14888733-14888443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               104, 66
               

               Conread position:
               6-324
               

               Cow position:
               chr15:662560-662250 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 56
               

               Conread position:
               6-351
               

               Cow position:
               chr15:8353945-8354289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 70
               

               Conread position:
               6-410
               

               Cow position:
               chr15:9622084-9622494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               416
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 217
               

               Conread position:
               6-459
               

               Cow position:
               chr15:34139895-34140331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               461
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 17
               

               Conread position:
               6-605
               

               Cow position:
               chr15:17196049-17196648 (view UCSC Genome Browser custom track)
               

               Alignm length:
               613
               

               Alignm identity:
               455
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 215
               

               Conread position:
               6-629
               

               Cow position:
               chr15:26912169-26911553 (view UCSC Genome Browser custom track)
               

               Alignm length:
               636
               

               Alignm identity:
               486
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 59
               

               Conread position:
               7-145
               

               Cow position:
               chr15:14760735-14760593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               116
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               7-221
               

               Cow position:
               chr15:50953760-50953548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               66, 122
               

               Conread position:
               7-380
               

               Cow position:
               chr15:38837649-38838022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 175
               

               Conread position:
               7-403
               

               Cow position:
               chr15:23696997-23696622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               400
               

               Alignm identity:
               273
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               93, 63
               

               Conread position:
               8-218
               

               Cow position:
               chr15:24982273-24982061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               47, 61
               

               Conread position:
               8-332
               

               Cow position:
               chr15:36353575-36353895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               232
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               92, 65
               

               Conread position:
               9-307
               

               Cow position:
               chr15:34284503-34284208 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 64
               

               Conread position:
               10-188
               

               Cow position:
               chr15:15511914-15512096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               10-358
               

               Cow position:
               chr15:10608401-10608053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 78
               

               Conread position:
               10-587
               

               Cow position:
               chr15:2953225-2952663 (view UCSC Genome Browser custom track)
               

               Alignm length:
               589
               

               Alignm identity:
               431
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 60
               

               Conread position:
               13-181
               

               Cow position:
               chr15:33382489-33382662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               13-188
               

               Cow position:
               chr15:13863824-13863645 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               134
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               60, 120
               

               Conread position:
               13-189
               

               Cow position:
               chr15:22321051-22321230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               60, 134
               

               Conread position:
               13-214
               

               Cow position:
               chr15:16489588-16489377 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               153
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               13-215
               

               Cow position:
               chr15:31542150-31542355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               7, 112
               

               Conread position:
               13-219
               

               Cow position:
               chr15:22984479-22984692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               56, 184
               

               Conread position:
               13-221
               

               Cow position:
               chr15:6102250-6102043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               60, 115
               

               Conread position:
               13-305
               

               Cow position:
               chr15:38935315-38935609 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 119
               

               Conread position:
               13-369
               

               Cow position:
               chr15:21583016-21582654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 244
               

               Conread position:
               13-405
               

               Cow position:
               chr15:1804422-1804031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               403
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 48
               

               Conread position:
               13-464
               

               Cow position:
               chr15:38883053-38883513 (view UCSC Genome Browser custom track)
               

               Alignm length:
               467
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 152
               

               Conread position:
               13-467
               

               Cow position:
               chr15:17418055-17417593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               473
               

               Alignm identity:
               305
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               60, 200
               

               Conread position:
               13-516
               

               Cow position:
               chr15:52482918-52482415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               515
               

               Alignm identity:
               388
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 73
               

               Conread position:
               13-516
               

               Cow position:
               chr15:53163931-53164433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               514
               

               Alignm identity:
               386
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 69
               

               Conread position:
               13-540
               

               Cow position:
               chr15:39490750-39490213 (view UCSC Genome Browser custom track)
               

               Alignm length:
               543
               

               Alignm identity:
               377
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 81
               

               Conread position:
               13-618
               

               Cow position:
               chr15:23530634-23531240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               623
               

               Alignm identity:
               424
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 16
               

               Conread position:
               14-169
               

               Cow position:
               chr15:11320888-11320729 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               14-189
               

               Cow position:
               chr15:32205248-32205071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               134
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               59, 12
               

               Conread position:
               14-251
               

               Cow position:
               chr15:13395460-13395698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               59, 144
               

               Conread position:
               14-627
               

               Cow position:
               chr15:27863420-27862807 (view UCSC Genome Browser custom track)
               

               Alignm length:
               634
               

               Alignm identity:
               439
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 20
               

               Conread position:
               15-181
               

               Cow position:
               chr15:25333468-25333299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               57, 110
               

               Conread position:
               15-187
               

               Cow position:
               chr15:8978229-8978397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               57, 94
               

               Conread position:
               15-207
               

               Cow position:
               chr15:7956165-7955966 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               57, 45
               

               Conread position:
               15-228
               

               Cow position:
               chr15:52432251-52432473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               173
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               15-248
               

               Cow position:
               chr15:40947464-40947227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               57, 215
               

               Conread position:
               15-249
               

               Cow position:
               chr15:49392411-49392643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               167
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               58, 18
               

               Conread position:
               15-283
               

               Cow position:
               chr15:20723069-20722809 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               78, 53
               

               Conread position:
               15-299
               

               Cow position:
               chr15:19807810-19807522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               213
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               44, 202
               

               Conread position:
               15-433
               

               Cow position:
               chr15:38394340-38394745 (view UCSC Genome Browser custom track)
               

               Alignm length:
               424
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 71
               

               Conread position:
               15-473
               

               Cow position:
               chr15:31283295-31283733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               466
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 210
               

               Conread position:
               15-488
               

               Cow position:
               chr15:38806592-38806116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               485
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 208
               

               Conread position:
               15-494
               

               Cow position:
               chr15:8961936-8962386 (view UCSC Genome Browser custom track)
               

               Alignm length:
               483
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               176, 65
               

               Conread position:
               15-507
               

               Cow position:
               chr15:23180358-23180824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               498
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               294, 64
               

               Conread position:
               15-629
               

               Cow position:
               chr15:21832527-21831896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               637
               

               Alignm identity:
               476
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 35
               

               Conread position:
               16-278
               

               Cow position:
               chr15:43851673-43851410 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               186
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               58, 161
               

               Conread position:
               17-207
               

               Cow position:
               chr15:7479084-7478890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               17-213
               

               Cow position:
               chr15:864095-864289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               77, 51
               

               Conread position:
               17-222
               

               Cow position:
               chr15:867594-867386 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               55, 203
               

               Conread position:
               17-357
               

               Cow position:
               chr15:11559440-11559105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 57
               

               Conread position:
               17-549
               

               Cow position:
               chr15:25585177-25584633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               552
               

               Alignm identity:
               396
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 225
               

               Conread position:
               17-629
               

               Cow position:
               chr15:43031111-43030494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               628
               

               Alignm identity:
               454
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 130
               

               Conread position:
               18-140
               

               Cow position:
               chr15:32300290-32300416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               100
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               18-344
               

               Cow position:
               chr15:7308242-7307914 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 55
               

               Conread position:
               18-354
               

               Cow position:
               chr15:5726228-5726573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 219
               

               Conread position:
               18-361
               

               Cow position:
               chr15:4295675-4296020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 200
               

               Conread position:
               19-496
               

               Cow position:
               chr15:19186701-19186227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               487
               

               Alignm identity:
               366
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 128
               

               Conread position:
               20-462
               

               Cow position:
               chr15:12785345-12785790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               461
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 140
               

               Conread position:
               20-628
               

               Cow position:
               chr15:28924840-28924240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               625
               

               Alignm identity:
               478
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 208
               

               Conread position:
               21-317
               

               Cow position:
               chr15:50664551-50664274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               207
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               90, 54
               

               Conread position:
               21-465
               

               Cow position:
               chr15:21907862-21908295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               448
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 34
               

               Conread position:
               22-181
               

               Cow position:
               chr15:33784907-33784739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               131
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               22-257
               

               Cow position:
               chr15:28038708-28038931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               204, 51
               

               Conread position:
               22-627
               

               Cow position:
               chr15:6227259-6226669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               621
               

               Alignm identity:
               464
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 48
               

               Conread position:
               22-629
               

               Cow position:
               chr15:31948923-31949527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               620
               

               Alignm identity:
               446
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 157
               

               Conread position:
               23-198
               

               Cow position:
               chr15:46364690-46364869 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               46, 66
               

               Conread position:
               24-629
               

               Cow position:
               chr15:16583775-16583178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               628
               

               Alignm identity:
               474
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 82
               

               Conread position:
               24-629
               

               Cow position:
               chr15:32226944-32226360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               617
               

               Alignm identity:
               437
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 49
               

               Conread position:
               26-308
               

               Cow position:
               chr15:12358958-12359240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               84, 191
               

               Conread position:
               26-349
               

               Cow position:
               chr15:50265564-50265246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 204
               

               Conread position:
               30-243
               

               Cow position:
               chr15:12203474-12203690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               42, 190
               

               Conread position:
               30-342
               

               Cow position:
               chr15:10512341-10512034 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 87
               

               Conread position:
               31-343
               

               Cow position:
               chr15:12870938-12870626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 8
               

               Conread position:
               36-453
               

               Cow position:
               chr15:3572766-3572359 (view UCSC Genome Browser custom track)
               

               Alignm length:
               423
               

               Alignm identity:
               269
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               52, 17
               

               Conread position:
               37-426
               

               Cow position:
               chr15:50341048-50341433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               404
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 127
               

               Conread position:
               37-449
               

               Cow position:
               chr15:39621266-39621679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               424
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 307
               

               Conread position:
               38-465
               

               Cow position:
               chr15:16928159-16927727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               446
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 38
               

               Conread position:
               39-339
               

               Cow position:
               chr15:915905-915612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 33
               

               Conread position:
               39-396
               

               Cow position:
               chr15:36773751-36773406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 33
               

               Conread position:
               44-323
               

               Cow position:
               chr15:9781415-9781684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 14
               

               Conread position:
               44-578
               

               Cow position:
               chr15:26421658-26421125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               545
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 10
               

               Conread position:
               46-470
               

               Cow position:
               chr15:51898169-51898586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               430
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 184
               

               Conread position:
               48-213
               

               Cow position:
               chr15:6129020-6128854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               25, 66
               

               Conread position:
               53-230
               

               Cow position:
               chr15:38845848-38846029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               134
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               19, 170
               

               Conread position:
               53-373
               

               Cow position:
               chr15:53045929-53045611 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               224
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               13, 18
               

               Conread position:
               53-426
               

               Cow position:
               chr15:26573328-26573706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 174
               

               Conread position:
               53-462
               

               Cow position:
               chr15:37931810-37931415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               417
               

               Alignm identity:
               282
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               13, 33
               

               Conread position:
               53-465
               

               Cow position:
               chr15:2799929-2800323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               425
               

               Alignm identity:
               291
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               25, 101
               

               Conread position:
               53-477
               

               Cow position:
               chr15:20482899-20482467 (view UCSC Genome Browser custom track)
               

               Alignm length:
               437
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 12
               

               Conread position:
               53-486
               

               Cow position:
               chr15:24941414-24941007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               437
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 45
               

               Conread position:
               53-507
               

               Cow position:
               chr15:27247454-27247913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               474
               

               Alignm identity:
               314
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               12, 86
               

               Conread position:
               53-578
               

               Cow position:
               chr15:50177057-50177573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               540
               

               Alignm identity:
               370
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 17
               

               Conread position:
               54-550
               

               Cow position:
               chr15:16616144-16616641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               520
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 19
               

               Conread position:
               54-619
               

               Cow position:
               chr15:20422828-20422245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               596
               

               Alignm identity:
               448
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 27
               

               Conread position:
               55-336
               

               Cow position:
               chr15:9106986-9107267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 165
               

               Conread position:
               55-452
               

               Cow position:
               chr15:2145189-2144788 (view UCSC Genome Browser custom track)
               

               Alignm length:
               410
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 125
               

               Conread position:
               57-322
               

               Cow position:
               chr15:39782918-39783174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               43, 16
               

               Conread position:
               57-564
               

               Cow position:
               chr15:13554306-13554803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               521
               

               Alignm identity:
               395
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 29
               
UCSC Genome Browser
               Conread position:
               58-210
               

               Cow position:
               chr15:18776799-18776642 (view  custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               10, 0
               
UCSC Genome Browser
               
               
               
Conread position: 58-243

               
               
               
Cow position: chr15:44280055-44280242 (view  custom track)

               
               
               
Alignm length: 190

               
               
               
Alignm identity: 149

               
               
               
Alignm E-value: 6e-37

               
               
               
Alignm gaps (pig, cow): 15, 159
UCSC Genome Browser
               
               
               
Conread position: 58-281

               
               
               
Cow position: chr15:31175744-31175978 (view  custom track)

               
               
               
Alignm length: 239

               
               
               
Alignm identity: 171

               
               
               
Alignm E-value: 2e-25

               
               
               
Alignm gaps (pig, cow): 15, 83

               
               
               Conread position:58-294
               
               
               Cow position:chr15:12601-12841 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:242
               
               
               Alignm identity:182
               
               
               Alignm E-value:9.94922e-44
               
               
               Alignm gaps (pig, cow):11, 227

               
               
               Conread position:58-312
               
               
               Cow position:chr15:35205198-35204940 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:264
               
               
               Alignm identity:205
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):53, 167

               
               
               Conread position:58-357
               
               
               Cow position:chr15:10737779-10737497 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:304
               
               
               Alignm identity:234
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):15, 41

               
               
               Conread position:58-360
               
               
               Cow position:chr15:12655962-12655657 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:310
               
               
               Alignm identity:228
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):51, 149

               
               
               Conread position:58-365
               
               
               Cow position:chr15:43750443-43750774 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:334
               
               
               Alignm identity:231
               
               
               Alignm E-value:3e-31
               
               
               Alignm gaps (pig, cow):15, 55

               
               
               Conread position:58-366
               
               
               Cow position:chr15:39316889-39316574 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:320
               
               
               Alignm identity:248
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):15, 205

               
               
               Conread position:58-374
               
               
               Cow position:chr15:22871567-22871875 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:321
               
               
               Alignm identity:243
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):15, 70

               
               
               Conread position:58-391
               
               
               Cow position:chr15:23598363-23598025 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:343
               
               
               Alignm identity:240
               
               
               Alignm E-value:1.4013e-45
               
               
               Alignm gaps (pig, cow):15, 164

               
               
               Conread position:58-440
               
               
               Cow position:chr15:35945484-35945875 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:401
               
               
               Alignm identity:289
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):42, 48

               
               
               Conread position:58-625
               
               
               Cow position:chr15:10335711-10336271 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:579
               
               
               Alignm identity:415
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):15, 23

               
               
               Conread position:58-627
               
               
               Cow position:chr15:33976742-33976166 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:594
               
               
               Alignm identity:452
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):15, 208

               
               
               Conread position:59-239
               
               
               Cow position:chr15:14261303-14261124 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:185
               
               
               Alignm identity:145
               
               
               Alignm E-value:4e-34
               
               
               Alignm gaps (pig, cow):14, 119

               
               
               Conread position:59-303
               
               
               Cow position:chr15:21166468-21166217 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:256
               
               
               Alignm identity:181
               
               
               Alignm E-value:7e-29
               
               
               Alignm gaps (pig, cow):35, 10

               
               
               Conread position:59-306
               
               
               Cow position:chr15:23780113-23779869 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:250
               
               
               Alignm identity:185
               
               
               Alignm E-value:3.00018e-42
               
               
               Alignm gaps (pig, cow):14, 60

               
               
               Conread position:59-347
               
               
               Cow position:chr15:5566887-5567184 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:304
               
               
               Alignm identity:228
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):42, 16

               
               
               Conread position:59-390
               
               
               Cow position:chr15:7535701-7535386 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:337
               
               
               Alignm identity:243
               
               
               Alignm E-value:3.00018e-42
               
               
               Alignm gaps (pig, cow):15, 155

               
               
               Conread position:59-392
               
               
               Cow position:chr15:5044519-5044171 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:357
               
               
               Alignm identity:262
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):62, 14

               
               
               Conread position:59-562
               
               
               Cow position:chr15:20487245-20486748 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:524
               
               
               Alignm identity:388
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):41, 13

               
               
               Conread position:62-309
               
               
               Cow position:chr15:31560428-31560197 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:251
               
               
               Alignm identity:185
               
               
               Alignm E-value:3e-31
               
               
               Alignm gaps (pig, cow):34, 11

               
               
               Conread position:64-451
               
               
               Cow position:chr15:29604739-29604374 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:392
               
               
               Alignm identity:278
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):44, 9

               
               
               Conread position:65-255
               
               
               Cow position:chr15:14176537-14176348 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:194
               
               
               Alignm identity:161
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):36, 8

               
               
               Conread position:65-397
               
               
               Cow position:chr15:17664290-17663974 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:345
               
               
               Alignm identity:257
               
               
               Alignm E-value:3.00018e-42
               
               
               Alignm gaps (pig, cow):8, 22

               
               
               Conread position:65-472
               
               
               Cow position:chr15:52454391-52454809 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:425
               
               
               Alignm identity:304
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):11, 156

               
               
               Conread position:67-294
               
               
               Cow position:chr15:35441116-35440885 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:236
               
               
               Alignm identity:188
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):6, 91

               
               
               Conread position:67-629
               
               
               Cow position:chr15:144285-143705 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:585
               
               
               Alignm identity:431
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):32, 198

               
               
               Conread position:68-224
               
               
               Cow position:chr15:12001578-12001424 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:160
               
               
               Alignm identity:118
               
               
               Alignm E-value:9e-21
               
               
               Alignm gaps (pig, cow):34, 88

               
               
               Conread position:69-622
               
               
               Cow position:chr15:18017893-18018449 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:584
               
               
               Alignm identity:403
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):20, 112

               
               
               Conread position:69-628
               
               
               Cow position:chr15:7962046-7962618 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:591
               
               
               Alignm identity:396
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):18, 33

               
               
               Conread position:72-320
               
               
               Cow position:chr15:5929865-5930107 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:253
               
               
               Alignm identity:186
               
               
               Alignm E-value:6e-37
               
               
               Alignm gaps (pig, cow):25, 105

               
               
               Conread position:73-628
               
               
               Cow position:chr15:21389194-21388645 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:564
               
               
               Alignm identity:442
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):42, 85

               
               
               Conread position:74-497
               
               
               Cow position:chr15:41418859-41418419 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:450
               
               
               Alignm identity:328
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):21, 69

               
               
               Conread position:75-222
               
               
               Cow position:chr15:5535389-5535239 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:151
               
               
               Alignm identity:119
               
               
               Alignm E-value:8e-30
               
               
               Alignm gaps (pig, cow):21, 0

               
               
               Conread position:75-309
               
               
               Cow position:chr15:28258486-28258250 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:238
               
               
               Alignm identity:176
               
               
               Alignm E-value:9.00054e-42
               
               
               Alignm gaps (pig, cow):21, 78

               
               
               Conread position:76-250
               
               
               Cow position:chr15:31024965-31025138 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:178
               
               
               Alignm identity:138
               
               
               Alignm E-value:1e-31
               
               
               Alignm gaps (pig, cow):25, 110

               
               
               Conread position:76-251
               
               
               Cow position:chr15:6272915-6272740 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:179
               
               
               Alignm identity:138
               
               
               Alignm E-value:1e-31
               
               
               Alignm gaps (pig, cow):36, 23

               
               
               Conread position:76-255
               
               
               Cow position:chr15:9497528-9497348 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:183
               
               
               Alignm identity:149
               
               
               Alignm E-value:8.00001e-41
               
               
               Alignm gaps (pig, cow):25, 143

               
               
               Conread position:76-491
               
               
               Cow position:chr15:16307393-16307802 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:426
               
               
               Alignm identity:314
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):9, 51

               
               
               Conread position:76-529
               
               
               Cow position:chr15:41000097-40999625 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:481
               
               
               Alignm identity:361
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):25, 9

               
               
               Conread position:77-455
               
               
               Cow position:chr15:22136663-22137030 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:384
               
               
               Alignm identity:297
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):30, 82

               
               
               Conread position:78-581
               
               
               Cow position:chr15:42415228-42415746 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:527
               
               
               Alignm identity:377
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):14, 147

               
               
               Conread position:79-627
               
               
               Cow position:chr15:22168047-22168589 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:566
               
               
               Alignm identity:412
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):17, 59

               
               
               Conread position:80-265
               
               
               Cow position:chr15:17162171-17162352 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:189
               
               
               Alignm identity:140
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):16, 126

               
               
               Conread position:80-332
               
               
               Cow position:chr15:9971002-9970749 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:257
               
               
               Alignm identity:183
               
               
               Alignm E-value:6e-37
               
               
               Alignm gaps (pig, cow):20, 96

               
               
               Conread position:81-348
               
               
               Cow position:chr15:37205025-37205287 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:271
               
               
               Alignm identity:203
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):15, 135

               
               
               Conread position:81-464
               
               
               Cow position:chr15:45322763-45323139 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:390
               
               
               Alignm identity:294
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):44, 17

               
               
               Conread position:82-318
               
               
               Cow position:chr15:39326539-39326299 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:243
               
               
               Alignm identity:188
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):19, 113

               
               
               Conread position:83-293
               
               
               Cow position:chr15:10660576-10660362 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:215
               
               
               Alignm identity:161
               
               
               Alignm E-value:2e-38
               
               
               Alignm gaps (pig, cow):25, 0

               
               
               Conread position:83-339
               
               
               Cow position:chr15:43599168-43599418 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:260
               
               
               Alignm identity:199
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):18, 134

               
               
               Conread position:85-441
               
               
               Cow position:chr15:45216820-45217155 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:361
               
               
               Alignm identity:258
               
               
               Alignm E-value:4.2039e-45
               
               
               Alignm gaps (pig, cow):16, 28

               
               
               Conread position:86-464
               
               
               Cow position:chr15:23768275-23767909 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:383
               
               
               Alignm identity:298
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):17, 131

               
               
               Conread position:86-464
               
               
               Cow position:chr15:43248795-43248415 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:389
               
               
               Alignm identity:260
               
               
               Alignm E-value:7e-39
               
               
               Alignm gaps (pig, cow):20, 121

               
               
               Conread position:88-619
               
               
               Cow position:chr15:20351816-20352360 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:553
               
               
               Alignm identity:429
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):13, 128

               
               
               Conread position:88-629
               
               
               Cow position:chr15:44640880-44641423 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:554
               
               
               Alignm identity:406
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):14, 134

               
               
               Conread position:90-486
               
               
               Cow position:chr15:26404269-26404650 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:404
               
               
               Alignm identity:292
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):11, 70

               
               
               Conread position:90-613
               
               
               Cow position:chr15:22713843-22713326 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:537
               
               
               Alignm identity:363
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):7, 31

               
               
               Conread position:92-477
               
               
               Cow position:chr15:41620201-41619818 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:394
               
               
               Alignm identity:294
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):19, 60

               
               
               Conread position:92-629
               
               
               Cow position:chr15:47843262-47842740 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:548
               
               
               Alignm identity:423
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):20, 169

               
               
               Conread position:93-454
               
               
               Cow position:chr15:21836674-21837035 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:373
               
               
               Alignm identity:252
               
               
               Alignm E-value:2e-36
               
               
               Alignm gaps (pig, cow):25, 12

               
               
               Conread position:97-465
               
               
               Cow position:chr15:6657093-6657462 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:377
               
               
               Alignm identity:272
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):18, 27

               
               
               Conread position:98-465
               
               
               Cow position:chr15:40343243-40343607 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:373
               
               
               Alignm identity:248
               
               
               Alignm E-value:6e-38
               
               
               Alignm gaps (pig, cow):122, 20

               
               
               Conread position:99-477
               
               
               Cow position:chr15:35417629-35417254 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:386
               
               
               Alignm identity:283
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):10, 126

               
               
               Conread position:99-536
               
               
               Cow position:chr15:13387073-13387514 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:448
               
               
               Alignm identity:331
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):19, 71

               
               
               Conread position:99-580
               
               
               Cow position:chr15:27732412-27732877 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:491
               
               
               Alignm identity:344
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):130, 6

               
               
               Conread position:99-629
               
               
               Cow position:chr15:5727651-5728158 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:543
               
               
               Alignm identity:397
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):13, 36

               
               
               Conread position:100-397
               
               
               Cow position:chr15:39436215-39436501 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:306
               
               
               Alignm identity:215
               
               
               Alignm E-value:3e-31
               
               
               Alignm gaps (pig, cow):18, 5

               
               
               Conread position:104-430
               
               
               Cow position:chr15:17213462-17213774 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:328
               
               
               Alignm identity:222
               
               
               Alignm E-value:3e-32
               
               
               Alignm gaps (pig, cow):271, 8

               
               
               Conread position:104-464
               
               
               Cow position:chr15:4534915-4535263 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:366
               
               
               Alignm identity:280
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):119, 11

               
               
               Conread position:104-465
               
               
               Cow position:chr15:9928363-9928713 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:363
               
               
               Alignm identity:256
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):271, 11

               
               
               Conread position:109-425
               
               
               Cow position:chr15:31599342-31599650 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:321
               
               
               Alignm identity:217
               
               
               Alignm E-value:3e-31
               
               
               Alignm gaps (pig, cow):85, 25

               
               
               Conread position:109-426
               
               
               Cow position:chr15:31907658-31907968 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:321
               
               
               Alignm identity:216
               
               
               Alignm E-value:3e-32
               
               
               Alignm gaps (pig, cow):85, 15

               
               
               Conread position:110-274
               
               
               Cow position:chr15:4461038-4460876 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:165
               
               
               Alignm identity:127
               
               
               Alignm E-value:3e-31
               
               
               Alignm gaps (pig, cow):40, 0

               
               
               Conread position:110-513
               
               
               Cow position:chr15:13515375-13515780 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:411
               
               
               Alignm identity:305
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):266, 200

               
               
               Conread position:110-584
               
               
               Cow position:chr15:47280130-47279672 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:485
               
               
               Alignm identity:346
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):358, 113

               
               
               Conread position:112-629
               
               
               Cow position:chr15:15880937-15881448 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:523
               
               
               Alignm identity:392
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):82, 99

               
               
               Conread position:113-272
               
               
               Cow position:chr15:46585549-46585389 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:161
               
               
               Alignm identity:123
               
               
               Alignm E-value:3e-30
               
               
               Alignm gaps (pig, cow):142, 0

               
               
               Conread position:114-617
               
               
               Cow position:chr15:5535772-5536269 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:519
               
               
               Alignm identity:375
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):121, 43

               
               
               Conread position:117-404
               
               
               Cow position:chr15:9526462-9526172 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:292
               
               
               Alignm identity:210
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):140, 99

               
               
               Conread position:123-599
               
               
               Cow position:chr15:32611774-32611294 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:490
               
               
               Alignm identity:339
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):60, 74

               
               
               Conread position:126-374
               
               
               Cow position:chr15:17859201-17858969 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:249
               
               
               Alignm identity:185
               
               
               Alignm E-value:7e-39
               
               
               Alignm gaps (pig, cow):31, 0

               
               
               Conread position:129-384
               
               
               Cow position:chr15:44054979-44054720 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:262
               
               
               Alignm identity:175
               
               
               Alignm E-value:5e-26
               
               
               Alignm gaps (pig, cow):42, 101

               
               
               Conread position:129-519
               
               
               Cow position:chr15:27280899-27281279 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:398
               
               
               Alignm identity:300
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):291, 78

               
               
               Conread position:129-529
               
               
               Cow position:chr15:16492703-16493107 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:409
               
               
               Alignm identity:267
               
               
               Alignm E-value:3e-40
               
               
               Alignm gaps (pig, cow):246, 89

               
               
               Conread position:130-439
               
               
               Cow position:chr15:5632710-5633004 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:316
               
               
               Alignm identity:240
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):32, 93

               
               
               Conread position:133-464
               
               
               Cow position:chr15:2210607-2210922 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:333
               
               
               Alignm identity:223
               
               
               Alignm E-value:3e-31
               
               
               Alignm gaps (pig, cow):155, 22

               
               
               Conread position:135-360
               
               
               Cow position:chr15:33770651-33770872 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:227
               
               
               Alignm identity:152
               
               
               Alignm E-value:4e-23
               
               
               Alignm gaps (pig, cow):94, 40

               
               
               Conread position:138-361
               
               
               Cow position:chr15:16904667-16904883 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:225
               
               
               Alignm identity:171
               
               
               Alignm E-value:3e-40
               
               
               Alignm gaps (pig, cow):171, 80

               
               
               Conread position:138-473
               
               
               Cow position:chr15:16448720-16449069 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:352
               
               
               Alignm identity:266
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):167, 279

               
               
               Conread position:139-464
               
               
               Cow position:chr15:30820799-30820479 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:329
               
               
               Alignm identity:241
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):97, 84

               
               
               Conread position:139-619
               
               
               Cow position:chr15:9871376-9870897 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:487
               
               
               Alignm identity:377
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):88, 17

               
               
               Conread position:141-354
               
               
               Cow position:chr15:11268746-11268957 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:215
               
               
               Alignm identity:152
               
               
               Alignm E-value:8e-30
               
               
               Alignm gaps (pig, cow):191, 162

               
               
               Conread position:141-628
               
               
               Cow position:chr15:19119572-19119090 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:500
               
               
               Alignm identity:374
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):9, 175

               
               
               Conread position:143-406
               
               
               Cow position:chr15:25306587-25306843 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:266
               
               
               Alignm identity:201
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):232, 81

               
               
               Conread position:143-462
               
               
               Cow position:chr15:36782283-36781982 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:320
               
               
               Alignm identity:242
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):75, 0

               
               
               Conread position:147-408
               
               
               Cow position:chr15:11646446-11646189 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:265
               
               
               Alignm identity:197
               
               
               Alignm E-value:9.80909e-45
               
               
               Alignm gaps (pig, cow):74, 159

               
               
               Conread position:149-466
               
               
               Cow position:chr15:14856419-14856126 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:319
               
               
               Alignm identity:239
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):156, 75

               
               
               Conread position:152-411
               
               
               Cow position:chr15:37777403-37777654 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:265
               
               
               Alignm identity:191
               
               
               Alignm E-value:1e-34
               
               
               Alignm gaps (pig, cow):72, 17

               
               
               Conread position:157-521
               
               
               Cow position:chr15:52380344-52380709 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:375
               
               
               Alignm identity:264
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):60, 184

               
               
               Conread position:157-625
               
               
               Cow position:chr15:37716877-37716415 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:475
               
               
               Alignm identity:373
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):151, 277

               
               
               Conread position:157-627
               
               
               Cow position:chr15:33604991-33605443 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:478
               
               
               Alignm identity:356
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):64, 38

               
               
               Conread position:159-613
               
               
               Cow position:chr15:6331981-6331550 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:459
               
               
               Alignm identity:327
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):275, 77

               
               
               Conread position:160-370
               
               
               Cow position:chr15:12441766-12441560 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:211
               
               
               Alignm identity:163
               
               
               Alignm E-value:9.00054e-42
               
               
               Alignm gaps (pig, cow):58, 0

               
               
               Conread position:160-502
               
               
               Cow position:chr15:52740067-52739725 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:352
               
               
               Alignm identity:262
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):56, 87

               
               
               Conread position:162-313
               
               
               Cow position:chr15:6083107-6082951 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:159
               
               
               Alignm identity:118
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):67, 55

               
               
               Conread position:163-332
               
               
               Cow position:chr15:36725116-36724953 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:170
               
               
               Alignm identity:132
               
               
               Alignm E-value:3e-30
               
               
               Alignm gaps (pig, cow):55, 0

               
               
               Conread position:163-521
               
               
               Cow position:chr15:46610994-46611337 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:365
               
               
               Alignm identity:269
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):309, 60

               
               
               Conread position:163-629
               
               
               Cow position:chr15:22751514-22751987 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:484
               
               
               Alignm identity:366
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):212, 54

               
               
               Conread position:164-435
               
               
               Cow position:chr15:47105104-47105364 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:273
               
               
               Alignm identity:205
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):212, 120

               
               
               Conread position:165-465
               
               
               Cow position:chr15:40009590-40009293 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:304
               
               
               Alignm identity:227
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):53, 146

               
               
               Conread position:165-555
               
               
               Cow position:chr15:25111108-25110713 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:402
               
               
               Alignm identity:289
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):64, 83

               
               
               Conread position:166-629
               
               
               Cow position:chr15:39851-40306 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:469
               
               
               Alignm identity:341
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):224, 60

               
               
               Conread position:166-629
               
               
               Cow position:chr15:5498969-5498504 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:475
               
               
               Alignm identity:364
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):58, 71

               
               
               Conread position:167-473
               
               
               Cow position:chr15:20725550-20725252 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:309
               
               
               Alignm identity:243
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):208, 24

               
               
               Conread position:167-564
               
               
               Cow position:chr15:16936782-16936404 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:403
               
               
               Alignm identity:297
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):50, 115

               
               
               Conread position:167-629
               
               
               Cow position:chr15:15708048-15707591 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:473
               
               
               Alignm identity:342
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):58, 138

               
               
               Conread position:169-397
               
               
               Cow position:chr15:4350535-4350311 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:236
               
               
               Alignm identity:183
               
               
               Alignm E-value:8.00001e-41
               
               
               Alignm gaps (pig, cow):48, 90

               
               
               Conread position:171-422
               
               
               Cow position:chr15:10845789-10846036 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:253
               
               
               Alignm identity:195
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):136, 51

               
               
               Conread position:172-339
               
               
               Cow position:chr15:13684197-13684033 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:168
               
               
               Alignm identity:139
               
               
               Alignm E-value:3e-40
               
               
               Alignm gaps (pig, cow):51, 0

               
               
               Conread position:172-478
               
               
               Cow position:chr15:51831516-51831222 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:310
               
               
               Alignm identity:224
               
               
               Alignm E-value:9.94922e-44
               
               
               Alignm gaps (pig, cow):204, 35

               
               
               Conread position:173-629
               
               
               Cow position:chr15:7750064-7749612 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:473
               
               
               Alignm identity:338
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):44, 9

               
               
               Conread position:174-309
               
               
               Cow position:chr15:31467134-31467263 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:136
               
               
               Alignm identity:108
               
               
               Alignm E-value:1e-24
               
               
               Alignm gaps (pig, cow):41, 0

               
               
               Conread position:174-359
               
               
               Cow position:chr15:23927401-23927216 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:190
               
               
               Alignm identity:155
               
               
               Alignm E-value:9.00054e-42
               
               
               Alignm gaps (pig, cow):53, 80

               
               
               Conread position:174-373
               
               
               Cow position:chr15:2522906-2523104 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:201
               
               
               Alignm identity:148
               
               
               Alignm E-value:1e-33
               
               
               Alignm gaps (pig, cow):52, 96

               
               
               Conread position:174-401
               
               
               Cow position:chr15:34145081-34144862 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:229
               
               
               Alignm identity:186
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):202, 38

               
               
               Conread position:174-414
               
               
               Cow position:chr15:22886620-22886855 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:244
               
               
               Alignm identity:166
               
               
               Alignm E-value:4e-23
               
               
               Alignm gaps (pig, cow):20, 29

               
               
               Conread position:174-489
               
               
               Cow position:chr15:6046243-6045931 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:322
               
               
               Alignm identity:248
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):47, 73

               
               
               Conread position:174-593
               
               
               Cow position:chr15:32204826-32204422 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:426
               
               
               Alignm identity:310
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):245, 49

               
               
               Conread position:174-620
               
               
               Cow position:chr15:29792832-29792401 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:455
               
               
               Alignm identity:332
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):246, 22

               
               
               Conread position:174-627
               
               
               Cow position:chr15:38898496-38898947 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:459
               
               
               Alignm identity:348
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):201, 43

               
               
               Conread position:177-312
               
               
               Cow position:chr15:29861398-29861533 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:136
               
               
               Alignm identity:103
               
               
               Alignm E-value:4e-24
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:177-495
               
               
               Cow position:chr15:28126969-28126659 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:324
               
               
               Alignm identity:242
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):198, 28

               
               
               Conread position:177-496
               
               
               Cow position:chr15:53680684-53680379 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:323
               
               
               Alignm identity:240
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):198, 44

               
               
               Conread position:183-435
               
               
               Cow position:chr15:11629804-11629554 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:262
               
               
               Alignm identity:189
               
               
               Alignm E-value:9e-31
               
               
               Alignm gaps (pig, cow):40, 28

               
               
               Conread position:183-473
               
               
               Cow position:chr15:11363094-11362813 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:296
               
               
               Alignm identity:226
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):251, 32

               
               
               Conread position:183-617
               
               
               Cow position:chr15:51632955-51632531 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:446
               
               
               Alignm identity:336
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):237, 18

               
               
               Conread position:184-393
               
               
               Cow position:chr15:49230257-49230056 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:212
               
               
               Alignm identity:149
               
               
               Alignm E-value:4e-23
               
               
               Alignm gaps (pig, cow):173, 16

               
               
               Conread position:184-445
               
               
               Cow position:chr15:21522869-21523127 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:263
               
               
               Alignm identity:210
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):236, 38

               
               
               Conread position:186-491
               
               
               Cow position:chr15:53402906-53402616 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:309
               
               
               Alignm identity:225
               
               
               Alignm E-value:3.00018e-42
               
               
               Alignm gaps (pig, cow):285, 29

               
               
               Conread position:191-462
               
               
               Cow position:chr15:12316016-12316278 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:273
               
               
               Alignm identity:209
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):224, 27

               
               
               Conread position:201-550
               
               
               Cow position:chr15:27281899-27282237 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:359
               
               
               Alignm identity:253
               
               
               Alignm E-value:3.00004e-41
               
               
               Alignm gaps (pig, cow):175, 85

               
               
               Conread position:214-629
               
               
               Cow position:chr15:3051460-3051874 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:430
               
               
               Alignm identity:313
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):13, 34

               
               
               Conread position:221-422
               
               
               Cow position:chr15:15025525-15025718 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:203
               
               
               Alignm identity:144
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):65, 84

               
               
               Conread position:221-623
               
               
               Cow position:chr15:9072312-9071899 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:423
               
               
               Alignm identity:298
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):67, 84

               
               
               Conread position:223-472
               
               
               Cow position:chr15:7827918-7827674 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:255
               
               
               Alignm identity:195
               
               
               Alignm E-value:9.94922e-44
               
               
               Alignm gaps (pig, cow):153, 88

               
               
               Conread position:225-405
               
               
               Cow position:chr15:36346881-36347066 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:186
               
               
               Alignm identity:149
               
               
               Alignm E-value:3e-40
               
               
               Alignm gaps (pig, cow):84, 0

               
               
               Conread position:226-623
               
               
               Cow position:chr15:33314325-33313924 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:409
               
               
               Alignm identity:310
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):83, 10

               
               
               Conread position:226-629
               
               
               Cow position:chr15:38846226-38846615 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:409
               
               
               Alignm identity:309
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):79, 27

               
               
               Conread position:229-384
               
               
               Cow position:chr15:33510814-33510972 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:159
               
               
               Alignm identity:118
               
               
               Alignm E-value:5e-25
               
               
               Alignm gaps (pig, cow):80, 0

               
               
               Conread position:234-418
               
               
               Cow position:chr15:43765658-43765844 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:189
               
               
               Alignm identity:138
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):75, 106

               
               
               Conread position:239-463
               
               
               Cow position:chr15:33525553-33525783 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:233
               
               
               Alignm identity:171
               
               
               Alignm E-value:4e-34
               
               
               Alignm gaps (pig, cow):70, 8

               
               
               Conread position:239-465
               
               
               Cow position:chr15:14259791-14259579 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:227
               
               
               Alignm identity:158
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):28, 0

               
               
               Conread position:261-616
               
               
               Cow position:chr15:50568315-50568686 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:376
               
               
               Alignm identity:265
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):114, 43

               
               
               Conread position:264-566
               
               
               Cow position:chr15:18605550-18605846 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:309
               
               
               Alignm identity:237
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):45, 77

               
               
               Conread position:269-430
               
               
               Cow position:chr15:33243311-33243480 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:170
               
               
               Alignm identity:135
               
               
               Alignm E-value:4e-33
               
               
               Alignm gaps (pig, cow):37, 0

               
               
               Conread position:269-466
               
               
               Cow position:chr15:241007-241206 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:201
               
               
               Alignm identity:159
               
               
               Alignm E-value:1.00053e-42
               
               
               Alignm gaps (pig, cow):106, 175

               
               
               Conread position:270-556
               
               
               Cow position:chr15:18284403-18284696 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:295
               
               
               Alignm identity:225
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):105, 172

               
               
               Conread position:270-629
               
               
               Cow position:chr15:31085702-31086084 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:391
               
               
               Alignm identity:294
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):106, 41

               
               
               Conread position:270-629
               
               
               Cow position:chr15:38683376-38683717 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:366
               
               
               Alignm identity:270
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):39, 32
Show alignments to all cow chromosomes.
Conread position:	1-110
Cow position:	chr15:36904201-36904313 (view UCSC Genome Browser custom track)
Alignm length:	113
Alignm identity:	95
Alignm E-value:	1e-24
Alignm gaps (pig, cow):	15, 0
Conread position:	1-113
Cow position:	chr15:37237566-37237679 (view UCSC Genome Browser custom track)
Alignm length:	114
Alignm identity:	91
Alignm E-value:	3e-22
Alignm gaps (pig, cow):	71, 0
Conread position:	1-127
Cow position:	chr15:43590111-43590241 (view UCSC Genome Browser custom track)
Alignm length:	131
Alignm identity:	101
Alignm E-value:	3e-21
Alignm gaps (pig, cow):	72, 0
Conread position:	1-134
Cow position:	chr15:41348269-41348407 (view UCSC Genome Browser custom track)
Alignm length:	139
Alignm identity:	109
Alignm E-value:	4e-24
Alignm gaps (pig, cow):	74, 0
Conread position:	1-139
Cow position:	chr15:20906130-20905994 (view UCSC Genome Browser custom track)
Alignm length:	142
Alignm identity:	108
Alignm E-value:	9e-21
Alignm gaps (pig, cow):	95, 67
Conread position:	1-141
Cow position:	chr15:38228034-38228177 (view UCSC Genome Browser custom track)
Alignm length:	144
Alignm identity:	109
Alignm E-value:	1e-23
Alignm gaps (pig, cow):	71, 0
Conread position:	1-143
Cow position:	chr15:26380848-26380702 (view UCSC Genome Browser custom track)
Alignm length:	147
Alignm identity:	119
Alignm E-value:	9e-31
Alignm gaps (pig, cow):	72, 0
Conread position:	1-144
Cow position:	chr15:27657000-27657148 (view UCSC Genome Browser custom track)
Alignm length:	149
Alignm identity:	112
Alignm E-value:	3e-22
Alignm gaps (pig, cow):	57, 0
Conread position:	1-147
Cow position:	chr15:15680945-15680795 (view UCSC Genome Browser custom track)
Alignm length:	151
Alignm identity:	113
Alignm E-value:	4e-23
Alignm gaps (pig, cow):	72, 0
Conread position:	1-150
Cow position:	chr15:25696400-25696248 (view UCSC Genome Browser custom track)
Alignm length:	154
Alignm identity:	113
Alignm E-value:	9e-21
Alignm gaps (pig, cow):	81, 69
Conread position:	1-151
Cow position:	chr15:30956425-30956273 (view UCSC Genome Browser custom track)
Alignm length:	154
Alignm identity:	119
Alignm E-value:	2e-27
Alignm gaps (pig, cow):	71, 86
Conread position:	1-153
Cow position:	chr15:40494575-40494420 (view UCSC Genome Browser custom track)
Alignm length:	156
Alignm identity:	114
Alignm E-value:	3e-22
Alignm gaps (pig, cow):	71, 0
Conread position:	1-154
Cow position:	chr15:18704034-18703882 (view UCSC Genome Browser custom track)
Alignm length:	158
Alignm identity:	122
Alignm E-value:	5e-25
Alignm gaps (pig, cow):	89, 71
Conread position:	1-155
Cow position:	chr15:20566027-20566185 (view UCSC Genome Browser custom track)
Alignm length:	159
Alignm identity:	128
Alignm E-value:	1e-33
Alignm gaps (pig, cow):	72, 0
Conread position:	1-158
Cow position:	chr15:840248-840091 (view UCSC Genome Browser custom track)
Alignm length:	161
Alignm identity:	128
Alignm E-value:	3e-31
Alignm gaps (pig, cow):	99, 69
Conread position:	1-162
Cow position:	chr15:43020741-43020568 (view UCSC Genome Browser custom track)
Alignm length:	174
Alignm identity:	130
Alignm E-value:	1e-23
Alignm gaps (pig, cow):	71, 0
Conread position:	1-163
Cow position:	chr15:17227030-17226861 (view UCSC Genome Browser custom track)
Alignm length:	170
Alignm identity:	125
Alignm E-value:	4e-23
Alignm gaps (pig, cow):	61, 0
Conread position:	1-165
Cow position:	chr15:3026906-3026733 (view UCSC Genome Browser custom track)
Alignm length:	174
Alignm identity:	131
Alignm E-value:	5e-26
Alignm gaps (pig, cow):	61, 0
Conread position:	1-167
Cow position:	chr15:40562784-40562616 (view UCSC Genome Browser custom track)
Alignm length:	172
Alignm identity:	139
Alignm E-value:	4e-35
Alignm gaps (pig, cow):	72, 78
Conread position:	1-169
Cow position:	chr15:12764905-12764731 (view UCSC Genome Browser custom track)
Alignm length:	175
Alignm identity:	127
Alignm E-value:	4e-24
Alignm gaps (pig, cow):	70, 0