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Cow genome map

           
Conread name:
           
rnca33b_d16.y1
        

               
Conread position:
               
1-131
               

               
Cow position:
               
chr16:23034020-23033887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
57, 72
               

               
Conread position:
               
1-132
               

               
Cow position:
               
chr16:30368634-30368768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
72, 111
               

               
Conread position:
               
1-134
               

               
Cow position:
               
chr16:7727849-7727986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
61, 113
               

               
Conread position:
               
1-138
               

               
Cow position:
               
chr16:9616651-9616795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
67, 137
               

               
Conread position:
               
1-143
               

               
Cow position:
               
chr16:8083736-8083882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
61, 50
               

               
Conread position:
               
1-143
               

               
Cow position:
               
chr16:26842941-26842793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
1-150
               

               
Cow position:
               
chr16:3938821-3938970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
90, 71
               

               
Conread position:
               
1-150
               

               
Cow position:
               
chr16:11467794-11467641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
1-150
               

               
Cow position:
               
chr16:46184352-46184198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
1-151
               

               
Cow position:
               
chr16:56614709-56614560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
92, 25
               

               
Conread position:
               
1-153
               

               
Cow position:
               
chr16:48130205-48130357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
99, 71
               

               
Conread position:
               
1-153
               

               
Cow position:
               
chr16:49174487-49174322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
1-154
               

               
Cow position:
               
chr16:5396625-5396780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
99, 71
               

               
Conread position:
               
1-154
               

               
Cow position:
               
chr16:23515575-23515729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
80, 67
               

               
Conread position:
               
1-154
               

               
Cow position:
               
chr16:49733954-49734109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
100, 68
               

               
Conread position:
               
1-155
               

               
Cow position:
               
chr16:16543043-16542885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
1-155
               

               
Cow position:
               
chr16:30580928-30581083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
72, 25
               

               
Conread position:
               
1-159
               

               
Cow position:
               
chr16:31011519-31011359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
80, 67
               

               
Conread position:
               
1-160
               

               
Cow position:
               
chr16:17617169-17617332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
1-160
               

               
Cow position:
               
chr16:23089032-23088876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
92, 67
               

               
Conread position:
               
1-161
               

               
Cow position:
               
chr16:17746224-17746067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
113, 71
               

               
Conread position:
               
1-163
               

               
Cow position:
               
chr16:12276295-12276460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
72, 129
               

               
Conread position:
               
1-165
               

               
Cow position:
               
chr16:30646700-30646538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
92, 71
               

               
Conread position:
               
1-166
               

               
Cow position:
               
chr16:27759409-27759581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
1-167
               

               
Cow position:
               
chr16:336394-336564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
1-167
               

               
Cow position:
               
chr16:11775806-11775969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
91, 61
               

               
Conread position:
               
1-168
               

               
Cow position:
               
chr16:6026808-6026975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
76, 114
               

               
Conread position:
               
1-169
               

               
Cow position:
               
chr16:33285203-33285381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
1-169
               

               
Cow position:
               
chr16:33717247-33717075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
1-169
               

               
Cow position:
               
chr16:48455863-48455701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
72, 23
               

               
Conread position:
               
1-170
               

               
Cow position:
               
chr16:3048961-3049133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
1-170
               

               
Cow position:
               
chr16:4277361-4277533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
1-171
               

               
Cow position:
               
chr16:9986865-9987048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
1-171
               

               
Cow position:
               
chr16:28233114-28233285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
71, 22
               

               
Conread position:
               
1-171
               

               
Cow position:
               
chr16:29311719-29311543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
1-171
               

               
Cow position:
               
chr16:56580098-56579929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
99, 68
               

               
Conread position:
               
1-172
               

               
Cow position:
               
chr16:4615251-4615076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
1-173
               

               
Cow position:
               
chr16:21442418-21442593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
72, 9
               

               
Conread position:
               
1-173
               

               
Cow position:
               
chr16:38581196-38581020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
1-173
               

               
Cow position:
               
chr16:43712651-43712476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
72, 154
               

               
Conread position:
               
1-174
               

               
Cow position:
               
chr16:9097217-9097040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
1-174
               

               
Cow position:
               
chr16:16025635-16025453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
1-174
               

               
Cow position:
               
chr16:16178216-16178049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
109, 67
               

               
Conread position:
               
1-174
               

               
Cow position:
               
chr16:22972579-22972756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
71, 165
               

               
Conread position:
               
1-174
               

               
Cow position:
               
chr16:33290578-33290401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
1-174
               

               
Cow position:
               
chr16:37154415-37154232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
1-174
               

               
Cow position:
               
chr16:51531219-51531395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
71, 12
               

               
Conread position:
               
1-175
               

               
Cow position:
               
chr16:12091847-12091672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
73, 111
               

               
Conread position:
               
1-175
               

               
Cow position:
               
chr16:13295794-13295616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
1-175
               

               
Cow position:
               
chr16:21044490-21044312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
1-175
               

               
Cow position:
               
chr16:33302376-33302200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
78, 54
               

               
Conread position:
               
1-178
               

               
Cow position:
               
chr16:8973017-8973198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
1-179
               

               
Cow position:
               
chr16:45278729-45278548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
1-179
               

               
Cow position:
               
chr16:50569451-50569276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
92, 58
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr16:8288760-8288936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
92, 71
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr16:24672669-24672852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
72, 113
               

               
Conread position:
               
1-181
               

               
Cow position:
               
chr16:9018067-9017883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
70, 133
               

               
Conread position:
               
1-181
               

               
Cow position:
               
chr16:11364866-11365050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
1-181
               

               
Cow position:
               
chr16:17180350-17180169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
72, 22
               

               
Conread position:
               
1-182
               

               
Cow position:
               
chr16:44144582-44144397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
1-183
               

               
Cow position:
               
chr16:13053739-13053555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
89, 67
               

               
Conread position:
               
1-183
               

               
Cow position:
               
chr16:15949317-15949500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
72, 89
               

               
Conread position:
               
1-184
               

               
Cow position:
               
chr16:17027718-17027531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
1-187
               

               
Cow position:
               
chr16:10011657-10011845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
72, 156
               

               
Conread position:
               
1-187
               

               
Cow position:
               
chr16:27117498-27117308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
72, 150
               

               
Conread position:
               
1-188
               

               
Cow position:
               
chr16:42253215-42253394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
91, 9
               

               
Conread position:
               
1-189
               

               
Cow position:
               
chr16:10033056-10032869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
71, 161
               

               
Conread position:
               
1-189
               

               
Cow position:
               
chr16:21974767-21974962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
59, 25
               

               
Conread position:
               
1-190
               

               
Cow position:
               
chr16:12507068-12507261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
1-192
               

               
Cow position:
               
chr16:7928191-7928386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
1-192
               

               
Cow position:
               
chr16:10249625-10249820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
1-192
               

               
Cow position:
               
chr16:12057243-12057050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
72, 128
               

               
Conread position:
               
1-192
               

               
Cow position:
               
chr16:15415535-15415737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
1-192
               

               
Cow position:
               
chr16:40029694-40029885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
72, 51
               

               
Conread position:
               
1-192
               

               
Cow position:
               
chr16:45193617-45193810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
92, 44
               

               
Conread position:
               
1-192
               

               
Cow position:
               
chr16:51143990-51143796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
83, 71
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr16:14210591-14210778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
92, 67
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr16:18572864-18573060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
78, 69
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr16:24202670-24202871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
54, 165
               

               
Conread position:
               
1-198
               

               
Cow position:
               
chr16:7546645-7546833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
1-198
               

               
Cow position:
               
chr16:12454582-12454795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
64, 172
               

               
Conread position:
               
1-198
               

               
Cow position:
               
chr16:39029902-39030107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
18, 90
               

               
Conread position:
               
1-199
               

               
Cow position:
               
chr16:10122307-10122510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
1-202
               

               
Cow position:
               
chr16:27051239-27051034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
1-203
               

               
Cow position:
               
chr16:56615311-56615518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
1-204
               

               
Cow position:
               
chr16:14376972-14376769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
99, 157
               

               
Conread position:
               
1-204
               

               
Cow position:
               
chr16:24142761-24142972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
61, 22
               

               
Conread position:
               
1-205
               

               
Cow position:
               
chr16:9279913-9280132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
1-206
               

               
Cow position:
               
chr16:5382377-5382163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
1-206
               

               
Cow position:
               
chr16:12220877-12220666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr16:31573437-31573238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
72, 101
               

               
Conread position:
               
1-209
               

               
Cow position:
               
chr16:11003371-11003583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
1-210
               

               
Cow position:
               
chr16:13996005-13996214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
71, 12
               

               
Conread position:
               
1-210
               

               
Cow position:
               
chr16:48448932-48448704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chr16:7812884-7812669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chr16:35297593-35297385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 72
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr16:15905053-15905273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
68, 22
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr16:34728934-34728712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
1-216
               

               
Cow position:
               
chr16:11390083-11390311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
72, 25
               

               
Conread position:
               
1-216
               

               
Cow position:
               
chr16:12939808-12939593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
92, 67
               

               
Conread position:
               
1-216
               

               
Cow position:
               
chr16:16232250-16232028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
1-216
               

               
Cow position:
               
chr16:18243928-18243717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
67, 121
               

               
Conread position:
               
1-216
               

               
Cow position:
               
chr16:55965377-55965158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
72, 133
               

               
Conread position:
               
1-219
               

               
Cow position:
               
chr16:11584216-11584432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
99, 51
               

               
Conread position:
               
1-219
               

               
Cow position:
               
chr16:32142283-32142062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
1-219
               

               
Cow position:
               
chr16:48613287-48613503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
99, 71
               

               
Conread position:
               
1-219
               

               
Cow position:
               
chr16:53408756-53408958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
1-220
               

               
Cow position:
               
chr16:17460368-17460138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
1-220
               

               
Cow position:
               
chr16:20824668-20824448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
80, 72
               

               
Conread position:
               
1-220
               

               
Cow position:
               
chr16:32893810-32893599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
99, 51
               

               
Conread position:
               
1-220
               

               
Cow position:
               
chr16:37401430-37401222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
143, 58
               

               
Conread position:
               
1-221
               

               
Cow position:
               
chr16:1582738-1582956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
88, 23
               

               
Conread position:
               
1-221
               

               
Cow position:
               
chr16:9560294-9560525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
1-221
               

               
Cow position:
               
chr16:15945061-15945286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
1-221
               

               
Cow position:
               
chr16:31149566-31149349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
109, 72
               

               
Conread position:
               
1-221
               

               
Cow position:
               
chr16:50442743-50442517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr16:10160988-10161210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
71, 52
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr16:18255990-18256218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr16:22323619-22323850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 46
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr16:56595196-56595418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
72, 175
               

               
Conread position:
               
1-224
               

               
Cow position:
               
chr16:33236092-33236317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
68, 44
               

               
Conread position:
               
1-226
               

               
Cow position:
               
chr16:14841555-14841322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr16:258092-258314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
72, 113
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr16:11359338-11359113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
100, 72
               

               
Conread position:
               
1-229
               

               
Cow position:
               
chr16:18047961-18048191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 218
               

               
Conread position:
               
1-231
               

               
Cow position:
               
chr16:22738988-22739216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
72, 117
               

               
Conread position:
               
1-231
               

               
Cow position:
               
chr16:40675875-40675638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
72, 225
               

               
Conread position:
               
1-231
               

               
Cow position:
               
chr16:56665757-56665536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
92, 25
               

               
Conread position:
               
1-233
               

               
Cow position:
               
chr16:30936054-30935817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
1-234
               

               
Cow position:
               
chr16:46743218-46742993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
92, 71
               

               
Conread position:
               
1-248
               

               
Cow position:
               
chr16:11094632-11094884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr16:35741070-35740813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
1-250
               

               
Cow position:
               
chr16:8530707-8530942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
228, 52
               

               
Conread position:
               
1-251
               

               
Cow position:
               
chr16:12687926-12688167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
99, 58
               

               
Conread position:
               
1-251
               

               
Cow position:
               
chr16:23718783-23719038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
72, 88
               

               
Conread position:
               
1-251
               

               
Cow position:
               
chr16:31561945-31561693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
99, 72
               

               
Conread position:
               
1-251
               

               
Cow position:
               
chr16:38244427-38244683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
72, 97
               

               
Conread position:
               
1-251
               

               
Cow position:
               
chr16:42977665-42977404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
1-251
               

               
Cow position:
               
chr16:46548071-46548335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr16:31880561-31880823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
56, 169
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr16:8673419-8673683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
72, 11
               

               
Conread position:
               
1-255
               

               
Cow position:
               
chr16:34291109-34291356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
95, 56
               

               
Conread position:
               
1-255
               

               
Cow position:
               
chr16:42432926-42433178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
101, 61
               

               
Conread position:
               
1-260
               

               
Cow position:
               
chr16:45294736-45294476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
81, 12
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr16:47274533-47274810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
72, 232
               

               
Conread position:
               
1-290
               

               
Cow position:
               
chr16:10020733-10020445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
71, 25
               

               
Conread position:
               
1-290
               

               
Cow position:
               
chr16:35067490-35067195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
40, 11
               

               
Conread position:
               
1-294
               

               
Cow position:
               
chr16:11660279-11660548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
109, 62
               

               
Conread position:
               
1-294
               

               
Cow position:
               
chr16:39516405-39516706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
70, 153
               

               
Conread position:
               
1-294
               

               
Cow position:
               
chr16:45700289-45700584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
72, 221
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr16:45122233-45121931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
64, 244
               

               
Conread position:
               
1-306
               

               
Cow position:
               
chr16:13696488-13696791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
72, 192
               

               
Conread position:
               
1-309
               

               
Cow position:
               
chr16:21761757-21762088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
58, 226
               

               
Conread position:
               
1-309
               

               
Cow position:
               
chr16:43125757-43126063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
72, 167
               

               
Conread position:
               
1-309
               

               
Cow position:
               
chr16:44654092-44654390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
72, 143
               

               
Conread position:
               
1-310
               

               
Cow position:
               
chr16:5907550-5907232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
72, 25
               

               
Conread position:
               
1-312
               

               
Cow position:
               
chr16:30662080-30662381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 22
               

               
Conread position:
               
1-312
               

               
Cow position:
               
chr16:50409439-50409110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
1-319
               

               
Cow position:
               
chr16:50943578-50943259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
55, 72
               

               
Conread position:
               
1-320
               

               
Cow position:
               
chr16:11083187-11082883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 68
               

               
Conread position:
               
1-328
               

               
Cow position:
               
chr16:33595757-33596069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
1-328
               

               
Cow position:
               
chr16:40446459-40446118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 160
               

               
Conread position:
               
1-330
               

               
Cow position:
               
chr16:889185-889491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
111, 22
               

               
Conread position:
               
1-331
               

               
Cow position:
               
chr16:19047242-19047575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 27
               

               
Conread position:
               
1-332
               

               
Cow position:
               
chr16:50933703-50934008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
99, 25
               

               
Conread position:
               
1-334
               

               
Cow position:
               
chr16:9905287-9904953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
68, 116
               

               
Conread position:
               
1-340
               

               
Cow position:
               
chr16:7583589-7583251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 78
               

               
Conread position:
               
1-347
               

               
Cow position:
               
chr16:42398698-42399052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 226
               

               
Conread position:
               
1-351
               

               
Cow position:
               
chr16:33198242-33198591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 22
               

               
Conread position:
               
1-352
               

               
Cow position:
               
chr16:8239673-8240023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
44, 22
               

               
Conread position:
               
1-354
               

               
Cow position:
               
chr16:17945732-17945362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
52, 314
               

               
Conread position:
               
1-357
               

               
Cow position:
               
chr16:27723402-27723053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
99, 65
               

               
Conread position:
               
1-360
               

               
Cow position:
               
chr16:42733830-42734179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 22
               

               
Conread position:
               
1-364
               

               
Cow position:
               
chr16:13461287-13461639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
69, 128
               

               
Conread position:
               
1-365
               

               
Cow position:
               
chr16:22984941-22984574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 68
               

               
Conread position:
               
1-366
               

               
Cow position:
               
chr16:3304227-3303862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
40, 48
               

               
Conread position:
               
1-366
               

               
Cow position:
               
chr16:7418564-7418212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 23
               

               
Conread position:
               
1-369
               

               
Cow position:
               
chr16:5975281-5974903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
86, 11
               

               
Conread position:
               
1-370
               

               
Cow position:
               
chr16:31348571-31348943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 23
               

               
Conread position:
               
1-373
               

               
Cow position:
               
chr16:7441909-7442281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 122
               

               
Conread position:
               
1-380
               

               
Cow position:
               
chr16:44147238-44147612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 241
               

               
Conread position:
               
1-381
               

               
Cow position:
               
chr16:46433133-46433510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 73
               

               
Conread position:
               
1-388
               

               
Cow position:
               
chr16:591613-592007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 225
               

               
Conread position:
               
1-389
               

               
Cow position:
               
chr16:3821721-3821341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 36
               

               
Conread position:
               
1-396
               

               
Cow position:
               
chr16:3047151-3047545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
30, 73
               

               
Conread position:
               
1-396
               

               
Cow position:
               
chr16:4275551-4275945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
30, 73
               

               
Conread position:
               
1-397
               

               
Cow position:
               
chr16:8203612-8204012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
110, 69
               

               
Conread position:
               
1-397
               

               
Cow position:
               
chr16:55784555-55784962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 206
               

               
Conread position:
               
1-402
               

               
Cow position:
               
chr16:16552757-16552358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 216
               

               
Conread position:
               
1-403
               

               
Cow position:
               
chr16:52274944-52275336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 72
               

               
Conread position:
               
1-405
               

               
Cow position:
               
chr16:6016193-6016601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
110, 67
               

               
Conread position:
               
1-406
               

               
Cow position:
               
chr16:9615024-9615444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 154
               

               
Conread position:
               
1-406
               

               
Cow position:
               
chr16:41530117-41530500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 23
               

               
Conread position:
               
1-408
               

               
Cow position:
               
chr16:56874041-56874430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
62, 72
               

               
Conread position:
               
1-409
               

               
Cow position:
               
chr16:8068625-8069030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 159
               

               
Conread position:
               
1-410
               

               
Cow position:
               
chr16:42444351-42443940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 90
               

               
Conread position:
               
1-413
               

               
Cow position:
               
chr16:10032830-10032412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 14
               

               
Conread position:
               
1-413
               

               
Cow position:
               
chr16:22773164-22772752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 66
               

               
Conread position:
               
1-413
               

               
Cow position:
               
chr16:37024836-37025269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
72, 224
               

               
Conread position:
               
1-413
               

               
Cow position:
               
chr16:56126587-56126996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 260
               

               
Conread position:
               
1-414
               

               
Cow position:
               
chr16:48581118-48580709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
72, 177
               

               
Conread position:
               
1-417
               

               
Cow position:
               
chr16:32301811-32302207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 222
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chr16:49336411-49336002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 74
               

               
Conread position:
               
1-425
               

               
Cow position:
               
chr16:8322805-8323214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 10
               

               
Conread position:
               
1-430
               

               
Cow position:
               
chr16:29038108-29037680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 153
               

               
Conread position:
               
1-433
               

               
Cow position:
               
chr16:10148458-10148045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 61
               

               
Conread position:
               
1-434
               

               
Cow position:
               
chr16:25839802-25839380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 52
               

               
Conread position:
               
1-434
               

               
Cow position:
               
chr16:56082171-56082596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 220
               

               
Conread position:
               
1-435
               

               
Cow position:
               
chr16:45047464-45047862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
1-436
               

               
Cow position:
               
chr16:7582907-7582473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 12
               

               
Conread position:
               
1-448
               

               
Cow position:
               
chr16:11008519-11008093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 44
               

               
Conread position:
               
1-448
               

               
Cow position:
               
chr16:38905033-38905477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 71
               

               
Conread position:
               
1-455
               

               
Cow position:
               
chr16:35195420-35195868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 221
               

               
Conread position:
               
1-455
               

               
Cow position:
               
chr16:47245778-47245330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 132
               

               
Conread position:
               
1-456
               

               
Cow position:
               
chr16:8493798-8494251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 72
               

               
Conread position:
               
1-456
               

               
Cow position:
               
chr16:14242559-14242116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 79
               

               
Conread position:
               
1-457
               

               
Cow position:
               
chr16:7429573-7429118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 78
               

               
Conread position:
               
1-461
               

               
Cow position:
               
chr16:43308374-43308825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 24
               

               
Conread position:
               
1-461
               

               
Cow position:
               
chr16:50282244-50282695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 22
               

               
Conread position:
               
1-462
               

               
Cow position:
               
chr16:8522200-8522653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 26
               

               
Conread position:
               
1-462
               

               
Cow position:
               
chr16:19670167-19670596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 71
               

               
Conread position:
               
1-464
               

               
Cow position:
               
chr16:22841856-22842320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 25
               

               
Conread position:
               
1-464
               

               
Cow position:
               
chr16:23681552-23681105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 70
               

               
Conread position:
               
1-464
               

               
Cow position:
               
chr16:37117267-37116807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 60
               

               
Conread position:
               
1-465
               

               
Cow position:
               
chr16:8958867-8959331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 22
               

               
Conread position:
               
1-465
               

               
Cow position:
               
chr16:28880123-28879644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
34, 60
               

               
Conread position:
               
1-465
               

               
Cow position:
               
chr16:29096108-29095686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 57
               

               
Conread position:
               
1-465
               

               
Cow position:
               
chr16:44743939-44744400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 236
               

               
Conread position:
               
1-465
               

               
Cow position:
               
chr16:46655473-46655014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 132
               

               
Conread position:
               
1-465
               

               
Cow position:
               
chr16:47662917-47662445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 23
               

               
Conread position:
               
1-466
               

               
Cow position:
               
chr16:13611247-13611714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 227
               

               
Conread position:
               
1-467
               

               
Cow position:
               
chr16:2751165-2750725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 25
               

               
Conread position:
               
1-470
               

               
Cow position:
               
chr16:20476724-20476259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 60
               

               
Conread position:
               
1-473
               

               
Cow position:
               
chr16:14106835-14106370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 128
               

               
Conread position:
               
1-477
               

               
Cow position:
               
chr16:17746035-17745554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 20
               

               
Conread position:
               
1-488
               

               
Cow position:
               
chr16:23483472-23482994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 22
               

               
Conread position:
               
1-512
               

               
Cow position:
               
chr16:6343715-6344231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 124
               

               
Conread position:
               
1-518
               

               
Cow position:
               
chr16:48956990-48956479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 73
               

               
Conread position:
               
1-523
               

               
Cow position:
               
chr16:15761960-15762495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 232
               

               
Conread position:
               
1-534
               

               
Cow position:
               
chr16:53428445-53427914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 74
               

               
Conread position:
               
1-535
               

               
Cow position:
               
chr16:21451041-21450510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 242
               

               
Conread position:
               
1-535
               

               
Cow position:
               
chr16:38663517-38664052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
436
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 146
               

               
Conread position:
               
1-544
               

               
Cow position:
               
chr16:48095578-48096115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 60
               

               
Conread position:
               
1-550
               

               
Cow position:
               
chr16:52834710-52835232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
366, 67
               

               
Conread position:
               
1-554
               

               
Cow position:
               
chr16:35758392-35757854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
429
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 35
               

               
Conread position:
               
1-555
               

               
Cow position:
               
chr16:52790222-52789701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
224, 61
               

               
Conread position:
               
1-560
               

               
Cow position:
               
chr16:33299588-33299024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 213
               

               
Conread position:
               
1-569
               

               
Cow position:
               
chr16:38708645-38709198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
581
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 67
               

               
Conread position:
               
1-577
               

               
Cow position:
               
chr16:23822838-23823398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
584
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 36
               

               
Conread position:
               
1-592
               

               
Cow position:
               
chr16:7665831-7665225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
610
               

               
Alignm identity:
               
486
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 218
               

               
Conread position:
               
1-600
               

               
Cow position:
               
chr16:9497069-9497679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
626
               

               
Alignm identity:
               
456
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 226
               

               
Conread position:
               
1-617
               

               
Cow position:
               
chr16:52170244-52169652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
624
               

               
Alignm identity:
               
438
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 59
               

               
Conread position:
               
1-618
               

               
Cow position:
               
chr16:7011263-7010642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
632
               

               
Alignm identity:
               
456
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 208
               

               
Conread position:
               
1-618
               

               
Cow position:
               
chr16:7136155-7136775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
633
               

               
Alignm identity:
               
438
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 72
               

               
Conread position:
               
1-618
               

               
Cow position:
               
chr16:40333144-40333749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
629
               

               
Alignm identity:
               
451
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 64
               

               
Conread position:
               
1-618
               

               
Cow position:
               
chr16:47519023-47518421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
638
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
99, 51
               

               
Conread position:
               
1-618
               

               
Cow position:
               
chr16:53813458-53814084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
636
               

               
Alignm identity:
               
450
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 48
               

               
Conread position:
               
1-618
               

               
Cow position:
               
chr16:54579356-54578746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
628
               

               
Alignm identity:
               
462
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 72
               

               
Conread position:
               
1-622
               

               
Cow position:
               
chr16:23564329-23563710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
636
               

               
Alignm identity:
               
485
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 193
               

               
Conread position:
               
1-623
               

               
Cow position:
               
chr16:49229583-49230202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
638
               

               
Alignm identity:
               
477
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 25
               

               
Conread position:
               
1-626
               

               
Cow position:
               
chr16:23058242-23058850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
636
               

               
Alignm identity:
               
454
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 51
               

               
Conread position:
               
1-627
               

               
Cow position:
               
chr16:34998431-34999041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
643
               

               
Alignm identity:
               
473
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 152
               

               
Conread position:
               
1-627
               

               
Cow position:
               
chr16:39165424-39164826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
634
               

               
Alignm identity:
               
474
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 57
               

               
Conread position:
               
1-627
               

               
Cow position:
               
chr16:42078657-42079275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
640
               

               
Alignm identity:
               
469
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 59
               

               
Conread position:
               
1-627
               

               
Cow position:
               
chr16:50906669-50906029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
650
               

               
Alignm identity:
               
481
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 71
               

               
Conread position:
               
1-627
               

               
Cow position:
               
chr16:55683489-55682858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
643
               

               
Alignm identity:
               
487
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 25
               

               
Conread position:
               
1-629
               

               
Cow position:
               
chr16:5415554-5416197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
664
               

               
Alignm identity:
               
475
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 168
               

               
Conread position:
               
1-629
               

               
Cow position:
               
chr16:15370874-15370246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
641
               

               
Alignm identity:
               
485
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 68
               

               
Conread position:
               
1-629
               

               
Cow position:
               
chr16:16402128-16402773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
659
               

               
Alignm identity:
               
470
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 165
               

               
Conread position:
               
1-629
               

               
Cow position:
               
chr16:18757644-18758277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
651
               

               
Alignm identity:
               
482
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 12
               

               
Conread position:
               
1-629
               

               
Cow position:
               
chr16:23472933-23472314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
653
               

               
Alignm identity:
               
472
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 68
               

               
Conread position:
               
1-629
               

               
Cow position:
               
chr16:29159304-29158693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
640
               

               
Alignm identity:
               
493
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 26
               

               
Conread position:
               
1-629
               

               
Cow position:
               
chr16:29655505-29654883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
647
               

               
Alignm identity:
               
485
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 65
               

               
Conread position:
               
1-629
               

               
Cow position:
               
chr16:31559095-31558455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
652
               

               
Alignm identity:
               
476
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 144
               

               
Conread position:
               
1-629
               

               
Cow position:
               
chr16:32969891-32970509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
645
               

               
Alignm identity:
               
441
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 67
               

               
Conread position:
               
1-629
               

               
Cow position:
               
chr16:47243153-47242516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
649
               

               
Alignm identity:
               
474
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 10
               

               
Conread position:
               
1-629
               

               
Cow position:
               
chr16:49125999-49126622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
643
               

               
Alignm identity:
               
479
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 63
               

               
Conread position:
               
2-146
               

               
Cow position:
               
chr16:24138561-24138707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
77, 70
               

               
Conread position:
               
2-161
               

               
Cow position:
               
chr16:41696196-41696038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
98, 17
               

               
Conread position:
               
2-176
               

               
Cow position:
               
chr16:42107819-42107643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
2-189
               

               
Cow position:
               
chr16:19076965-19077155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
2-189
               

               
Cow position:
               
chr16:25369579-25369388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
2-197
               

               
Cow position:
               
chr16:15927428-15927230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
70, 188
               

               
Conread position:
               
2-199
               

               
Cow position:
               
chr16:8090339-8090541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
2-201
               

               
Cow position:
               
chr16:10171731-10171528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
2-202
               

               
Cow position:
               
chr16:31484476-31484673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
109, 66
               

               
Conread position:
               
2-203
               

               
Cow position:
               
chr16:32536830-32536627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
2-207
               

               
Cow position:
               
chr16:32426535-32426746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
71, 21
               

               
Conread position:
               
2-215
               

               
Cow position:
               
chr16:11629158-11628940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
2-215
               

               
Cow position:
               
chr16:14386781-14386567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
99, 129
               

               
Conread position:
               
2-215
               

               
Cow position:
               
chr16:43909646-43909866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
2-216
               

               
Cow position:
               
chr16:7626343-7626134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
98, 21
               

               
Conread position:
               
2-220
               

               
Cow position:
               
chr16:21370000-21370216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
71, 22
               

               
Conread position:
               
2-222
               

               
Cow position:
               
chr16:22318761-22318982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
69, 126
               

               
Conread position:
               
2-231
               

               
Cow position:
               
chr16:6609319-6609543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
110, 46
               

               
Conread position:
               
2-233
               

               
Cow position:
               
chr16:13886266-13886501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
71, 229
               

               
Conread position:
               
2-249
               

               
Cow position:
               
chr16:8953484-8953750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
60, 138
               

               
Conread position:
               
2-249
               

               
Cow position:
               
chr16:16842339-16842585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
92, 66
               

               
Conread position:
               
2-256
               

               
Cow position:
               
chr16:52213864-52214115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
71, 181
               

               
Conread position:
               
2-278
               

               
Cow position:
               
chr16:50931343-50931602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
2-281
               

               
Cow position:
               
chr16:20664302-20664034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
26, 72
               

               
Conread position:
               
2-293
               

               
Cow position:
               
chr16:20872201-20871926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
97, 17
               

               
Conread position:
               
2-309
               

               
Cow position:
               
chr16:4851925-4852233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
71, 88
               

               
Conread position:
               
2-312
               

               
Cow position:
               
chr16:12108181-12108506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
71, 231
               

               
Conread position:
               
2-312
               

               
Cow position:
               
chr16:56796464-56796785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 229
               

               
Conread position:
               
2-322
               

               
Cow position:
               
chr16:27020259-27019946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
71, 114
               

               
Conread position:
               
2-330
               

               
Cow position:
               
chr16:54709863-54710169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
224, 63
               

               
Conread position:
               
2-363
               

               
Cow position:
               
chr16:38191667-38191303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 115
               

               
Conread position:
               
2-364
               

               
Cow position:
               
chr16:56510022-56510380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
92, 155
               

               
Conread position:
               
2-380
               

               
Cow position:
               
chr16:6887258-6887633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 227
               

               
Conread position:
               
2-390
               

               
Cow position:
               
chr16:7977174-7976796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
70, 155
               

               
Conread position:
               
2-396
               

               
Cow position:
               
chr16:14685201-14685588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 71
               

               
Conread position:
               
2-407
               

               
Cow position:
               
chr16:8065695-8066091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 220
               

               
Conread position:
               
2-424
               

               
Cow position:
               
chr16:26702728-26703142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 138
               

               
Conread position:
               
2-439
               

               
Cow position:
               
chr16:11815400-11815849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 337
               

               
Conread position:
               
2-448
               

               
Cow position:
               
chr16:9729388-9728953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 219
               

               
Conread position:
               
2-453
               

               
Cow position:
               
chr16:26649445-26649889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 15
               

               
Conread position:
               
2-471
               

               
Cow position:
               
chr16:47820764-47820297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 162
               

               
Conread position:
               
2-487
               

               
Cow position:
               
chr16:14361286-14360814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 99
               

               
Conread position:
               
2-581
               

               
Cow position:
               
chr16:5096123-5095591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
585
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 71
               

               
Conread position:
               
2-618
               

               
Cow position:
               
chr16:820441-819834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
633
               

               
Alignm identity:
               
485
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 71
               

               
Conread position:
               
2-627
               

               
Cow position:
               
chr16:5654691-5654079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
636
               

               
Alignm identity:
               
463
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 87
               

               
Conread position:
               
2-628
               

               
Cow position:
               
chr16:24128897-24128264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
641
               

               
Alignm identity:
               
462
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 182
               

               
Conread position:
               
2-629
               

               
Cow position:
               
chr16:19756589-19757226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
657
               

               
Alignm identity:
               
475
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 191
               

               
Conread position:
               
2-629
               

               
Cow position:
               
chr16:42969731-42970370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
645
               

               
Alignm identity:
               
476
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 241
               

               
Conread position:
               
2-629
               

               
Cow position:
               
chr16:45731215-45731809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
636
               

               
Alignm identity:
               
461
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
374, 17
               

               
Conread position:
               
2-629
               

               
Cow position:
               
chr16:49125331-49125958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
646
               

               
Alignm identity:
               
477
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 24
               

               
Conread position:
               
2-629
               

               
Cow position:
               
chr16:51598423-51599041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
640
               

               
Alignm identity:
               
468
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 72
               

               
Conread position:
               
3-131
               

               
Cow position:
               
chr16:41095919-41095789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
70, 76
               

               
Conread position:
               
3-138
               

               
Cow position:
               
chr16:41653161-41653026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
97, 70
               

               
Conread position:
               
3-144
               

               
Cow position:
               
chr16:30054911-30055055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
70, 84
               

               
Conread position:
               
3-145
               

               
Cow position:
               
chr16:51393198-51393345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
70, 97
               

               
Conread position:
               
3-154
               

               
Cow position:
               
chr16:33073696-33073844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
70, 49
               

               
Conread position:
               
3-160
               

               
Cow position:
               
chr16:34506534-34506382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
97, 23
               

               
Conread position:
               
3-165
               

               
Cow position:
               
chr16:18669150-18668986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
93, 70
               

               
Conread position:
               
3-167
               

               
Cow position:
               
chr16:27326933-27327102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
3-168
               

               
Cow position:
               
chr16:52325407-52325576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
3-169
               

               
Cow position:
               
chr16:12111779-12111944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
97, 65
               

               
Conread position:
               
3-172
               

               
Cow position:
               
chr16:18429777-18429606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
97, 75
               

               
Conread position:
               
3-174
               

               
Cow position:
               
chr16:13796456-13796285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
70, 23
               

               
Conread position:
               
3-174
               

               
Cow position:
               
chr16:14343772-14343596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
3-174
               

               
Cow position:
               
chr16:25419062-25419237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
3-175
               

               
Cow position:
               
chr16:55961136-55961312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
3-182
               

               
Cow position:
               
chr16:8809908-8810085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
90, 65
               

               
Conread position:
               
3-182
               

               
Cow position:
               
chr16:24674483-24674669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
3-182
               

               
Cow position:
               
chr16:28980021-28979841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
93, 65
               

               
Conread position:
               
3-187
               

               
Cow position:
               
chr16:12091463-12091659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
3-188
               

               
Cow position:
               
chr16:17474945-17474768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
97, 58
               

               
Conread position:
               
3-188
               

               
Cow position:
               
chr16:28199217-28199032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
90, 59
               

               
Conread position:
               
3-189
               

               
Cow position:
               
chr16:53451894-53451707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
10, 70
               

               
Conread position:
               
3-192
               

               
Cow position:
               
chr16:15714301-15714108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
3-203
               

               
Cow position:
               
chr16:55613312-55613516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
3-204
               

               
Cow position:
               
chr16:33632489-33632688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
70, 99
               

               
Conread position:
               
3-206
               

               
Cow position:
               
chr16:48567717-48567518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
69, 99
               

               
Conread position:
               
3-218
               

               
Cow position:
               
chr16:45047037-45046808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
59, 159
               

               
Conread position:
               
3-219
               

               
Cow position:
               
chr16:47180976-47181193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
70, 140
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr16:17283629-17283417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
98, 65
               

               
Conread position:
               
3-221
               

               
Cow position:
               
chr16:45943577-45943804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
72, 24
               

               
Conread position:
               
3-222
               

               
Cow position:
               
chr16:8205893-8206106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
65, 20
               

               
Conread position:
               
3-224
               

               
Cow position:
               
chr16:15407367-15407592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 158
               

               
Conread position:
               
3-226
               

               
Cow position:
               
chr16:30174332-30174563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
66, 176
               

               
Conread position:
               
3-238
               

               
Cow position:
               
chr16:9578304-9578542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
93, 70
               

               
Conread position:
               
3-240
               

               
Cow position:
               
chr16:14733234-14733480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
70, 224
               

               
Conread position:
               
3-245
               

               
Cow position:
               
chr16:12543180-12542929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
70, 39
               

               
Conread position:
               
3-248
               

               
Cow position:
               
chr16:9830637-9830391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
70, 17
               

               
Conread position:
               
3-251
               

               
Cow position:
               
chr16:11177943-11177690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
69, 39
               

               
Conread position:
               
3-251
               

               
Cow position:
               
chr16:56893426-56893672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
70, 84
               

               
Conread position:
               
3-255
               

               
Cow position:
               
chr16:47303923-47304187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
70, 221
               

               
Conread position:
               
3-262
               

               
Cow position:
               
chr16:42539393-42539659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 15
               

               
Conread position:
               
3-275
               

               
Cow position:
               
chr16:12324643-12324371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
97, 70
               

               
Conread position:
               
3-275
               

               
Cow position:
               
chr16:44429066-44428797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 21
               

               
Conread position:
               
3-282
               

               
Cow position:
               
chr16:44394476-44394172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
3-283
               

               
Cow position:
               
chr16:21002183-21002478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
3-285
               

               
Cow position:
               
chr16:44138301-44138594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 154
               

               
Conread position:
               
3-294
               

               
Cow position:
               
chr16:30186833-30186542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 41
               

               
Conread position:
               
3-299
               

               
Cow position:
               
chr16:40514304-40514587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
3-325
               

               
Cow position:
               
chr16:36120807-36121111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
3-328
               

               
Cow position:
               
chr16:45348579-45348252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 213
               

               
Conread position:
               
3-334
               

               
Cow position:
               
chr16:23955642-23955966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 20
               

               
Conread position:
               
3-349
               

               
Cow position:
               
chr16:20614685-20614327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 103
               

               
Conread position:
               
3-353
               

               
Cow position:
               
chr16:38243471-38243821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 176
               

               
Conread position:
               
3-364
               

               
Cow position:
               
chr16:39682910-39683278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 84
               

               
Conread position:
               
3-369
               

               
Cow position:
               
chr16:31078914-31079272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
97, 20
               

               
Conread position:
               
3-374
               

               
Cow position:
               
chr16:34153380-34153755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 36
               

               
Conread position:
               
3-390
               

               
Cow position:
               
chr16:24855723-24855347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
111, 67
               

               
Conread position:
               
3-397
               

               
Cow position:
               
chr16:33753624-33753229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 272
               

               
Conread position:
               
3-397
               

               
Cow position:
               
chr16:45554623-45554238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
168, 72
               

               
Conread position:
               
3-397
               

               
Cow position:
               
chr16:45678166-45677775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 20
               

               
Conread position:
               
3-397
               

               
Cow position:
               
chr16:56850537-56850139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 86
               

               
Conread position:
               
3-403
               

               
Cow position:
               
chr16:11957389-11957790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 70
               

               
Conread position:
               
3-412
               

               
Cow position:
               
chr16:51697264-51696880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 57
               

               
Conread position:
               
3-418
               

               
Cow position:
               
chr16:28395902-28396316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 20
               

               
Conread position:
               
3-434
               

               
Cow position:
               
chr16:51247134-51246725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 125
               

               
Conread position:
               
3-452
               

               
Cow position:
               
chr16:238455-238006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 52
               

               
Conread position:
               
3-456
               

               
Cow position:
               
chr16:16597748-16597303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 71
               

               
Conread position:
               
3-456
               

               
Cow position:
               
chr16:54664610-54665070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 69
               

               
Conread position:
               
3-464
               

               
Cow position:
               
chr16:44210371-44210813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 8
               

               
Conread position:
               
3-466
               

               
Cow position:
               
chr16:10039655-10040106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 137
               

               
Conread position:
               
3-473
               

               
Cow position:
               
chr16:13689852-13689387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 73
               

               
Conread position:
               
3-473
               

               
Cow position:
               
chr16:29766509-29766068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 55
               

               
Conread position:
               
3-507
               

               
Cow position:
               
chr16:1548692-1549190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 72
               

               
Conread position:
               
3-529
               

               
Cow position:
               
chr16:11774861-11775385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 22
               

               
Conread position:
               
3-575
               

               
Cow position:
               
chr16:14754139-14754708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
598
               

               
Alignm identity:
               
433
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 70
               

               
Conread position:
               
3-593
               

               
Cow position:
               
chr16:13712753-13713296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
597
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 20
               

               
Conread position:
               
3-616
               

               
Cow position:
               
chr16:15824252-15824860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
627
               

               
Alignm identity:
               
446
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 143
               

               
Conread position:
               
3-617
               

               
Cow position:
               
chr16:15726163-15726788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
646
               

               
Alignm identity:
               
482
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 27
               

               
Conread position:
               
3-617
               

               
Cow position:
               
chr16:17143127-17142504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
637
               

               
Alignm identity:
               
466
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 224
               

               
Conread position:
               
3-618
               

               
Cow position:
               
chr16:8025680-8026270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
627
               

               
Alignm identity:
               
475
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 56
               

               
Conread position:
               
3-618
               

               
Cow position:
               
chr16:8621433-8620824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
639
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 86
               

               
Conread position:
               
3-618
               

               
Cow position:
               
chr16:41752392-41753009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
637
               

               
Alignm identity:
               
448
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 77
               

               
Conread position:
               
3-619
               

               
Cow position:
               
chr16:6262660-6263283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
642
               

               
Alignm identity:
               
436
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 341
               

               
Conread position:
               
3-627
               

               
Cow position:
               
chr16:47852409-47853036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
655
               

               
Alignm identity:
               
459
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 56
               

               
Conread position:
               
3-628
               

               
Cow position:
               
chr16:54288056-54287437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
641
               

               
Alignm identity:
               
445
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 108
               

               
Conread position:
               
3-629
               

               
Cow position:
               
chr16:4971832-4972464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
644
               

               
Alignm identity:
               
484
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 219
               

               
Conread position:
               
3-629
               

               
Cow position:
               
chr16:7151984-7152594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
635
               

               
Alignm identity:
               
473
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 20
               

               
Conread position:
               
3-629
               

               
Cow position:
               
chr16:7542475-7541859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
649
               

               
Alignm identity:
               
486
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 65
               

               
Conread position:
               
3-629
               

               
Cow position:
               
chr16:9933349-9932725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
648
               

               
Alignm identity:
               
471
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 78
               

               
Conread position:
               
3-629
               

               
Cow position:
               
chr16:17665844-17665202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
651
               

               
Alignm identity:
               
476
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 43
               

               
Conread position:
               
3-629
               

               
Cow position:
               
chr16:18206144-18205522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
649
               

               
Alignm identity:
               
495
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 70
               

               
Conread position:
               
3-629
               

               
Cow position:
               
chr16:33704991-33704367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
645
               

               
Alignm identity:
               
473
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 56
               

               
Conread position:
               
3-629
               

               
Cow position:
               
chr16:39473969-39474576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
640
               

               
Alignm identity:
               
453
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 15
               

               
Conread position:
               
3-629
               

               
Cow position:
               
chr16:46552982-46552368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
649
               

               
Alignm identity:
               
478
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 54
               

               
Conread position:
               
3-629
               

               
Cow position:
               
chr16:48398068-48398682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
636
               

               
Alignm identity:
               
452
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 70
               

               
Conread position:
               
3-629
               

               
Cow position:
               
chr16:51043835-51043194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
662
               

               
Alignm identity:
               
457
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 43
               

               
Conread position:
               
3-629
               

               
Cow position:
               
chr16:51501117-51500495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
640
               

               
Alignm identity:
               
443
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 64
               

               
Conread position:
               
4-136
               

               
Cow position:
               
chr16:7270347-7270482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
69, 129
               

               
Conread position:
               
4-146
               

               
Cow position:
               
chr16:42992407-42992261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
4-150
               

               
Cow position:
               
chr16:53004005-53004154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
69, 83
               

               
Conread position:
               
4-178
               

               
Cow position:
               
chr16:9242396-9242214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
4-187
               

               
Cow position:
               
chr16:32512115-32512302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
4-188
               

               
Cow position:
               
chr16:9602995-9602809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
4-189
               

               
Cow position:
               
chr16:4507879-4507698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
106, 56
               

               
Conread position:
               
4-195
               

               
Cow position:
               
chr16:30908761-30908951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
96, 66
               

               
Conread position:
               
4-197
               

               
Cow position:
               
chr16:34204877-34205070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
97, 55
               

               
Conread position:
               
4-212
               

               
Cow position:
               
chr16:9959017-9958808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
77, 64
               

               
Conread position:
               
4-219
               

               
Cow position:
               
chr16:31241104-31241319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
69, 83
               

               
Conread position:
               
4-219
               

               
Cow position:
               
chr16:34223640-34223423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
16, 130
               

               
Conread position:
               
4-221
               

               
Cow position:
               
chr16:52357348-52357570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
4-223
               

               
Cow position:
               
chr16:40454733-40454509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
4-231
               

               
Cow position:
               
chr16:50395561-50395324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
4-273
               

               
Cow position:
               
chr16:31565553-31565823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
67, 209
               

               
Conread position:
               
4-278
               

               
Cow position:
               
chr16:21381384-21381647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
88, 54
               

               
Conread position:
               
4-288
               

               
Cow position:
               
chr16:47835107-47834834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
69, 80
               

               
Conread position:
               
4-291
               

               
Cow position:
               
chr16:4971074-4970785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
69, 46
               

               
Conread position:
               
4-325
               

               
Cow position:
               
chr16:48146466-48146788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
68, 229
               

               
Conread position:
               
4-398
               

               
Cow position:
               
chr16:14762122-14762510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
69, 182
               

               
Conread position:
               
4-411
               

               
Cow position:
               
chr16:42201093-42200676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 83
               

               
Conread position:
               
4-434
               

               
Cow position:
               
chr16:8193644-8193211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 19
               

               
Conread position:
               
4-435
               

               
Cow position:
               
chr16:4135047-4134627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
69, 36
               

               
Conread position:
               
4-453
               

               
Cow position:
               
chr16:22850516-22850073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 172
               

               
Conread position:
               
4-473
               

               
Cow position:
               
chr16:29380445-29379978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 240
               

               
Conread position:
               
4-495
               

               
Cow position:
               
chr16:34687410-34687905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
68, 489
               

               
Conread position:
               
4-523
               

               
Cow position:
               
chr16:33646203-33645688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 71
               

               
Conread position:
               
4-528
               

               
Cow position:
               
chr16:53553528-53554048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 217
               

               
Conread position:
               
4-532
               

               
Cow position:
               
chr16:23729730-23730277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 64
               

               
Conread position:
               
4-571
               

               
Cow position:
               
chr16:8841085-8840511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
588
               

               
Alignm identity:
               
440
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 75
               

               
Conread position:
               
4-613
               

               
Cow position:
               
chr16:13306683-13307288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
623
               

               
Alignm identity:
               
476
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 68
               

               
Conread position:
               
4-613
               

               
Cow position:
               
chr16:49217378-49217986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
625
               

               
Alignm identity:
               
430
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 20
               

               
Conread position:
               
4-624
               

               
Cow position:
               
chr16:2223206-2223838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
635
               

               
Alignm identity:
               
494
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 420
               

               
Conread position:
               
4-627
               

               
Cow position:
               
chr16:4910334-4910969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
641
               

               
Alignm identity:
               
489
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 354
               

               
Conread position:
               
4-627
               

               
Cow position:
               
chr16:26676501-26677128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
647
               

               
Alignm identity:
               
468
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 71
               

               
Conread position:
               
4-629
               

               
Cow position:
               
chr16:13698706-13698065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
644
               

               
Alignm identity:
               
494
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 303
               

               
Conread position:
               
5-127
               

               
Cow position:
               
chr16:51216858-51216982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
88, 67
               

               
Conread position:
               
5-160
               

               
Cow position:
               
chr16:49388575-49388424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
91, 64
               

               
Conread position:
               
5-163
               

               
Cow position:
               
chr16:43323047-43322877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
5-192
               

               
Cow position:
               
chr16:30211636-30211453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
95, 63
               

               
Conread position:
               
5-202
               

               
Cow position:
               
chr16:35074752-35074551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
68, 124
               

               
Conread position:
               
5-216
               

               
Cow position:
               
chr16:51795417-51795628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
67, 98
               

               
Conread position:
               
5-220
               

               
Cow position:
               
chr16:12379155-12379381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
5-220
               

               
Cow position:
               
chr16:18953769-18953555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
109, 68
               

               
Conread position:
               
5-263
               

               
Cow position:
               
chr16:30305630-30305885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
99, 21
               

               
Conread position:
               
5-267
               

               
Cow position:
               
chr16:11916020-11916286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
88, 217
               

               
Conread position:
               
5-309
               

               
Cow position:
               
chr16:34753766-34754077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
68, 222
               

               
Conread position:
               
5-332
               

               
Cow position:
               
chr16:54225330-54225644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
76, 86
               

               
Conread position:
               
5-338
               

               
Cow position:
               
chr16:10505001-10504689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
95, 18
               

               
Conread position:
               
5-351
               

               
Cow position:
               
chr16:12320410-12320065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 68
               

               
Conread position:
               
5-441
               

               
Cow position:
               
chr16:14568304-14568729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 64
               

               
Conread position:
               
5-464
               

               
Cow position:
               
chr16:48145219-48145666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 64
               

               
Conread position:
               
5-574
               

               
Cow position:
               
chr16:9973295-9973877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
596
               

               
Alignm identity:
               
431
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 225
               

               
Conread position:
               
5-623
               

               
Cow position:
               
chr16:16368547-16369161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
641
               

               
Alignm identity:
               
448
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 22
               

               
Conread position:
               
5-628
               

               
Cow position:
               
chr16:7076107-7075471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
653
               

               
Alignm identity:
               
448
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 160
               

               
Conread position:
               
6-163
               

               
Cow position:
               
chr16:29060570-29060405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
6-164
               

               
Cow position:
               
chr16:33629606-33629450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
94, 31
               

               
Conread position:
               
6-192
               

               
Cow position:
               
chr16:9079517-9079338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
6-210
               

               
Cow position:
               
chr16:9596553-9596351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
87, 64
               

               
Conread position:
               
6-247
               

               
Cow position:
               
chr16:11134799-11135037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
104, 67
               

               
Conread position:
               
6-249
               

               
Cow position:
               
chr16:51610639-51610892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
6-389
               

               
Cow position:
               
chr16:20205650-20205260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 235
               

               
Conread position:
               
6-428
               

               
Cow position:
               
chr16:31117432-31117851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 41
               

               
Conread position:
               
6-629
               

               
Cow position:
               
chr16:32781558-32780944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
637
               

               
Alignm identity:
               
444
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 159
               

               
Conread position:
               
7-222
               

               
Cow position:
               
chr16:49860419-49860201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
108, 66
               

               
Conread position:
               
7-235
               

               
Cow position:
               
chr16:9730019-9730247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 99
               

               
Conread position:
               
7-282
               

               
Cow position:
               
chr16:26030691-26030973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
105, 79
               

               
Conread position:
               
7-337
               

               
Cow position:
               
chr16:9600601-9600290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
88, 61
               

               
Conread position:
               
7-370
               

               
Cow position:
               
chr16:54734434-54734061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 122
               

               
Conread position:
               
7-617
               

               
Cow position:
               
chr16:19644071-19643468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
623
               

               
Alignm identity:
               
460
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 44
               

               
Conread position:
               
8-187
               

               
Cow position:
               
chr16:19496833-19497015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
81, 68
               

               
Conread position:
               
8-247
               

               
Cow position:
               
chr16:56243704-56243940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
92, 64
               

               
Conread position:
               
8-382
               

               
Cow position:
               
chr16:8231179-8231544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 107
               

               
Conread position:
               
9-461
               

               
Cow position:
               
chr16:3614920-3614484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 33
               

               
Conread position:
               
10-143
               

               
Cow position:
               
chr16:33458761-33458628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
100, 62
               

               
Conread position:
               
10-174
               

               
Cow position:
               
chr16:12976652-12976485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
63, 16
               

               
Conread position:
               
10-301
               

               
Cow position:
               
chr16:16571082-16570806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
10-324
               

               
Cow position:
               
chr16:8738249-8737935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
63, 77
               

               
Conread position:
               
11-361
               

               
Cow position:
               
chr16:31269324-31268974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 210
               

               
Conread position:
               
11-470
               

               
Cow position:
               
chr16:56845720-56846171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 205
               

               
Conread position:
               
12-447
               

               
Cow position:
               
chr16:56522293-56522722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 70
               

               
Conread position:
               
13-158
               

               
Cow position:
               
chr16:23187732-23187577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
13-169
               

               
Cow position:
               
chr16:30594958-30594799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
13-173
               

               
Cow position:
               
chr16:12251203-12251038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
60, 139
               

               
Conread position:
               
13-175
               

               
Cow position:
               
chr16:37299973-37299808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
13-184
               

               
Cow position:
               
chr16:48093939-48094110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
60, 13
               

               
Conread position:
               
13-189
               

               
Cow position:
               
chr16:10598066-10597881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
13-190
               

               
Cow position:
               
chr16:39385668-39385492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
87, 60
               

               
Conread position:
               
13-207
               

               
Cow position:
               
chr16:56821787-56821584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
13-208
               

               
Cow position:
               
chr16:50286692-50286496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
60, 37
               

               
Conread position:
               
13-210
               

               
Cow position:
               
chr16:13252140-13252325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
88, 53
               

               
Conread position:
               
13-235
               

               
Cow position:
               
chr16:31575326-31575101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
60, 209
               

               
Conread position:
               
13-249
               

               
Cow position:
               
chr16:28444308-28444545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 224
               

               
Conread position:
               
13-274
               

               
Cow position:
               
chr16:56670731-56671002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
53, 217
               

               
Conread position:
               
13-305
               

               
Cow position:
               
chr16:48917654-48917354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
13-318
               

               
Cow position:
               
chr16:6224627-6224321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
60, 152
               

               
Conread position:
               
13-352
               

               
Cow position:
               
chr16:29712595-29712262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 63
               

               
Conread position:
               
13-353
               

               
Cow position:
               
chr16:12274250-12273909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 129
               

               
Conread position:
               
13-440
               

               
Cow position:
               
chr16:29557445-29557875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 58
               

               
Conread position:
               
13-615
               

               
Cow position:
               
chr16:45139843-45139243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
615
               

               
Alignm identity:
               
443
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 60
               

               
Conread position:
               
13-629
               

               
Cow position:
               
chr16:42241944-42242568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
642
               

               
Alignm identity:
               
472
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 52
               

               
Conread position:
               
14-197
               

               
Cow position:
               
chr16:23811301-23811118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
63, 145
               

               
Conread position:
               
14-270
               

               
Cow position:
               
chr16:1220000-1220260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 66
               

               
Conread position:
               
14-433
               

               
Cow position:
               
chr16:50289329-50288921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 59
               

               
Conread position:
               
14-629
               

               
Cow position:
               
chr16:45610166-45609547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
631
               

               
Alignm identity:
               
477
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 173
               

               
Conread position:
               
15-188
               

               
Cow position:
               
chr16:42038242-42038064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
15-192
               

               
Cow position:
               
chr16:43866669-43866855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
57, 67
               

               
Conread position:
               
15-203
               

               
Cow position:
               
chr16:26843903-26843714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
57, 75
               

               
Conread position:
               
15-214
               

               
Cow position:
               
chr16:10523812-10523609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
15-215
               

               
Cow position:
               
chr16:9447692-9447495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
58, 116
               

               
Conread position:
               
15-215
               

               
Cow position:
               
chr16:42864558-42864761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
57, 200
               

               
Conread position:
               
15-247
               

               
Cow position:
               
chr16:40377635-40377870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
57, 198
               

               
Conread position:
               
15-312
               

               
Cow position:
               
chr16:2417409-2417710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 206
               

               
Conread position:
               
15-355
               

               
Cow position:
               
chr16:38020288-38019961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
58, 225
               

               
Conread position:
               
15-383
               

               
Cow position:
               
chr16:47302056-47301693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
57, 132
               

               
Conread position:
               
15-473
               

               
Cow position:
               
chr16:34168765-34168319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 205
               

               
Conread position:
               
15-486
               

               
Cow position:
               
chr16:13578678-13579135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 211
               

               
Conread position:
               
15-491
               

               
Cow position:
               
chr16:3246029-3246486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 54
               

               
Conread position:
               
15-496
               

               
Cow position:
               
chr16:27701086-27701547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 57
               

               
Conread position:
               
17-323
               

               
Cow position:
               
chr16:33267896-33267587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 179
               

               
Conread position:
               
18-360
               

               
Cow position:
               
chr16:23366401-23366076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
278, 55
               

               
Conread position:
               
18-623
               

               
Cow position:
               
chr16:7505253-7504674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
615
               

               
Alignm identity:
               
430
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 29
               

               
Conread position:
               
18-629
               

               
Cow position:
               
chr16:7456282-7456895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
627
               

               
Alignm identity:
               
474
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 109
               

               
Conread position:
               
19-278
               

               
Cow position:
               
chr16:51241364-51241625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
53, 194
               

               
Conread position:
               
19-473
               

               
Cow position:
               
chr16:15960106-15960570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 303
               

               
Conread position:
               
21-332
               

               
Cow position:
               
chr16:41578397-41578088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 48
               

               
Conread position:
               
21-465
               

               
Cow position:
               
chr16:7619003-7619464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 146
               

               
Conread position:
               
22-224
               

               
Cow position:
               
chr16:27534268-27534064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
50, 147
               

               
Conread position:
               
22-229
               

               
Cow position:
               
chr16:25484492-25484301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
22-411
               

               
Cow position:
               
chr16:10592613-10592226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 144
               

               
Conread position:
               
22-618
               

               
Cow position:
               
chr16:31978013-31978616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
611
               

               
Alignm identity:
               
458
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 199
               

               
Conread position:
               
22-627
               

               
Cow position:
               
chr16:51112711-51113308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
617
               

               
Alignm identity:
               
457
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 45
               

               
Conread position:
               
24-618
               

               
Cow position:
               
chr16:4059534-4058938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
614
               

               
Alignm identity:
               
437
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 189
               

               
Conread position:
               
24-627
               

               
Cow position:
               
chr16:53508820-53509425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
617
               

               
Alignm identity:
               
460
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 29
               

               
Conread position:
               
26-188
               

               
Cow position:
               
chr16:38743189-38743031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
86, 43
               

               
Conread position:
               
27-211
               

               
Cow position:
               
chr16:43185464-43185277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
46, 130
               

               
Conread position:
               
27-452
               

               
Cow position:
               
chr16:11615078-11615483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 194
               

               
Conread position:
               
27-618
               

               
Cow position:
               
chr16:33226373-33226959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
602
               

               
Alignm identity:
               
433
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 45
               

               
Conread position:
               
29-374
               

               
Cow position:
               
chr16:5836753-5836406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
50, 15
               

               
Conread position:
               
29-425
               

               
Cow position:
               
chr16:21905310-21904934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 47
               

               
Conread position:
               
29-464
               

               
Cow position:
               
chr16:48006331-48006757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 31
               

               
Conread position:
               
30-192
               

               
Cow position:
               
chr16:19053720-19053884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
63, 42
               

               
Conread position:
               
30-411
               

               
Cow position:
               
chr16:4192269-4192633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 131
               

               
Conread position:
               
30-430
               

               
Cow position:
               
chr16:5896582-5896186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 102
               

               
Conread position:
               
31-172
               

               
Cow position:
               
chr16:22927683-22927541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
62, 47
               

               
Conread position:
               
31-242
               

               
Cow position:
               
chr16:15953652-15953872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
27, 22
               

               
Conread position:
               
36-492
               

               
Cow position:
               
chr16:33482605-33482141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 260
               

               
Conread position:
               
37-337
               

               
Cow position:
               
chr16:56565752-56565453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 36
               

               
Conread position:
               
37-449
               

               
Cow position:
               
chr16:37452462-37452868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 32
               

               
Conread position:
               
37-629
               

               
Cow position:
               
chr16:42753000-42752435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
606
               

               
Alignm identity:
               
431
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 32
               

               
Conread position:
               
37-629
               

               
Cow position:
               
chr16:48086718-48087308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
605
               

               
Alignm identity:
               
465
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 32
               

               
Conread position:
               
39-182
               

               
Cow position:
               
chr16:12836073-12836219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
34, 138
               

               
Conread position:
               
39-266
               

               
Cow position:
               
chr16:22327672-22327426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
21, 208
               

               
Conread position:
               
39-354
               

               
Cow position:
               
chr16:22380202-22380515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 33
               

               
Conread position:
               
39-447
               

               
Cow position:
               
chr16:13969207-13969629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 199
               

               
Conread position:
               
40-620
               

               
Cow position:
               
chr16:8448500-8449088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
607
               

               
Alignm identity:
               
463
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 119
               

               
Conread position:
               
40-629
               

               
Cow position:
               
chr16:601100-600504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
606
               

               
Alignm identity:
               
428
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 46
               

               
Conread position:
               
41-366
               

               
Cow position:
               
chr16:33130615-33130291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
32, 276
               

               
Conread position:
               
41-610
               

               
Cow position:
               
chr16:52854873-52855442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
596
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 32
               

               
Conread position:
               
45-234
               

               
Cow position:
               
chr16:20648062-20647879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
28, 88
               

               
Conread position:
               
47-173
               

               
Cow position:
               
chr16:9950792-9950919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
26, 12
               

               
Conread position:
               
48-465
               

               
Cow position:
               
chr16:14758879-14758471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 45
               

               
Conread position:
               
49-377
               

               
Cow position:
               
chr16:56900762-56901075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
24, 64
               

               
Conread position:
               
53-317
               

               
Cow position:
               
chr16:53089216-53089463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
20, 49
               

               
Conread position:
               
53-448
               

               
Cow position:
               
chr16:48493322-48492935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 255
               

               
Conread position:
               
53-489
               

               
Cow position:
               
chr16:39278928-39279373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 162
               

               
Conread position:
               
53-496
               

               
Cow position:
               
chr16:15809119-15808674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 139
               

               
Conread position:
               
53-579
               

               
Cow position:
               
chr16:23025480-23024947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 18
               

               
Conread position:
               
53-627
               

               
Cow position:
               
chr16:23066796-23066231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
595
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 12
               

               
Conread position:
               
54-220
               

               
Cow position:
               
chr16:56563975-56564141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
19, 77
               

               
Conread position:
               
54-602
               

               
Cow position:
               
chr16:49169240-49169791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
446
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 263
               

               
Conread position:
               
54-627
               

               
Cow position:
               
chr16:18427322-18426738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
598
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 9
               

               
Conread position:
               
54-627
               

               
Cow position:
               
chr16:53267863-53267282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
594
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 16
               

               
Conread position:
               
54-629
               

               
Cow position:
               
chr16:16264967-16265537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
442
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 47
               

               
Conread position:
               
55-221
               

               
Cow position:
               
chr16:24403290-24403459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
18, 119
               

               
Conread position:
               
55-360
               

               
Cow position:
               
chr16:6319343-6319032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
55-396
               

               
Cow position:
               
chr16:17627069-17626731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 167
               

               
Conread position:
               
55-460
               

               
Cow position:
               
chr16:42257584-42257191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
51, 6
               

               
Conread position:
               
55-553
               

               
Cow position:
               
chr16:13195196-13195691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 87
               

               
Conread position:
               
55-629
               

               
Cow position:
               
chr16:18353817-18354384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
589
               

               
Alignm identity:
               
448
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 117
               

               
Conread position:
               
56-629
               

               
Cow position:
               
chr16:28922912-28922352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
445
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 150
               

               
Conread position:
               
57-240
               

               
Cow position:
               
chr16:25154605-25154795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
16, 169
               

               
Conread position:
               
57-283
               

               
Cow position:
               
chr16:18072307-18072083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
44, 9
               

               
Conread position:
               
57-464
               

               
Cow position:
               
chr16:20633739-20634137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 74
               

               
Conread position:
               
57-586
               

               
Cow position:
               
chr16:12634020-12633515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 9
               

               
Conread position:
               
58-209
               

               
Cow position:
               
chr16:8065511-8065668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
42, 59
               

               
Conread position:
               
58-255
               

               
Cow position:
               
chr16:55968572-55968371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
39, 15
               

               
Conread position:
               
58-256
               

               
Cow position:
               
chr16:9500655-9500454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
15, 30
               

               
Conread position:
               
58-279
               

               
Cow position:
               
chr16:3114676-3114451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
15, 163
               

               
Conread position:
               
58-325
               

               
Cow position:
               
chr16:10945304-10945570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
15, 121
               

               
Conread position:
               
58-329
               

               
Cow position:
               
chr16:30135772-30136029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
43, 28
               

               
Conread position:
               
58-339
               

               
Cow position:
               
chr16:54342121-54341843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
38, 15
               

               
Conread position:
               
58-357
               

               
Cow position:
               
chr16:35297213-35296910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 206
               

               
Conread position:
               
58-366
               

               
Cow position:
               
chr16:52133383-52133687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 15
               

               
Conread position:
               
58-410
               

               
Cow position:
               
chr16:39172011-39172378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
15, 80
               

               
Conread position:
               
58-448
               

               
Cow position:
               
chr16:42633607-42633999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 133
               

               
Conread position:
               
58-457
               

               
Cow position:
               
chr16:20025577-20025184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 23
               

               
Conread position:
               
58-464
               

               
Cow position:
               
chr16:22009278-22008878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
21, 44
               

               
Conread position:
               
58-464
               

               
Cow position:
               
chr16:53086205-53086591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 120
               

               
Conread position:
               
58-465
               

               
Cow position:
               
chr16:5364038-5363621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 260
               

               
Conread position:
               
58-466
               

               
Cow position:
               
chr16:50688656-50688257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 18
               

               
Conread position:
               
58-505
               

               
Cow position:
               
chr16:28833980-28833528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 231
               

               
Conread position:
               
58-532
               

               
Cow position:
               
chr16:16548744-16548267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 15
               

               
Conread position:
               
58-587
               

               
Cow position:
               
chr16:25965632-25965112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 17
               

               
Conread position:
               
58-606
               

               
Cow position:
               
chr16:56875527-56876071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 124
               

               
Conread position:
               
58-614
               

               
Cow position:
               
chr16:22804463-22804997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 15
               

               
Conread position:
               
58-615
               

               
Cow position:
               
chr16:16096867-16096315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 16
               

               
Conread position:
               
58-618
               

               
Cow position:
               
chr16:5727067-5726501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
430
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 93
               

               
Conread position:
               
58-629
               

               
Cow position:
               
chr16:18141194-18141763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
435
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 15
               

               
Conread position:
               
58-629
               

               
Cow position:
               
chr16:40562366-40561787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
585
               

               
Alignm identity:
               
435
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 15
               

               
Conread position:
               
58-629
               

               
Cow position:
               
chr16:43800780-43801336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
589
               

               
Alignm identity:
               
435
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 146
               

               
Conread position:
               
59-255
               

               
Cow position:
               
chr16:8273704-8273900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
37, 14
               

               
Conread position:
               
59-315
               

               
Cow position:
               
chr16:18052468-18052208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 76
               

               
Conread position:
               
59-340
               

               
Cow position:
               
chr16:10773256-10772987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
42, 101
               

               
Conread position:
               
59-618
               

               
Cow position:
               
chr16:6378988-6379535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 103
               

               
Conread position:
               
60-222
               

               
Cow position:
               
chr16:6310568-6310732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
37, 15
               

               
Conread position:
               
60-310
               

               
Cow position:
               
chr16:17903512-17903767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
42, 15
               

               
Conread position:
               
60-370
               

               
Cow position:
               
chr16:7550101-7549792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 26
               

               
Conread position:
               
60-617
               

               
Cow position:
               
chr16:7499181-7498643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 13
               

               
Conread position:
               
60-629
               

               
Cow position:
               
chr16:43276152-43275578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
588
               

               
Alignm identity:
               
435
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 119
               

               
Conread position:
               
61-287
               

               
Cow position:
               
chr16:48545953-48545726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 12
               

               
Conread position:
               
61-306
               

               
Cow position:
               
chr16:12501027-12501275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
12, 82
               

               
Conread position:
               
61-306
               

               
Cow position:
               
chr16:33869628-33869874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
10, 156
               

               
Conread position:
               
61-332
               

               
Cow position:
               
chr16:50453898-50453624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
40, 15
               

               
Conread position:
               
61-458
               

               
Cow position:
               
chr16:35623119-35623511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 7
               

               
Conread position:
               
62-425
               

               
Cow position:
               
chr16:43105384-43105741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 19
               

               
Conread position:
               
63-228
               

               
Cow position:
               
chr16:22329293-22329124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
63-262
               

               
Cow position:
               
chr16:33530539-33530343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
35, 10
               

               
Conread position:
               
63-301
               

               
Cow position:
               
chr16:43675002-43674766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 10
               

               
Conread position:
               
63-425
               

               
Cow position:
               
chr16:12360844-12361200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 25
               

               
Conread position:
               
64-208
               

               
Cow position:
               
chr16:22824704-22824851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
64-433
               

               
Cow position:
               
chr16:30036863-30037230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 9
               

               
Conread position:
               
64-629
               

               
Cow position:
               
chr16:48369823-48370388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
582
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 23
               

               
Conread position:
               
65-452
               

               
Cow position:
               
chr16:19408400-19408768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
36, 8
               

               
Conread position:
               
65-570
               

               
Cow position:
               
chr16:24826203-24825687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 154
               

               
Conread position:
               
66-216
               

               
Cow position:
               
chr16:15254628-15254778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
7, 51
               

               
Conread position:
               
67-457
               

               
Cow position:
               
chr16:51069785-51070189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 142
               

               
Conread position:
               
69-456
               

               
Cow position:
               
chr16:48385277-48385660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 89
               

               
Conread position:
               
70-628
               

               
Cow position:
               
chr16:4698867-4699391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 6
               

               
Conread position:
               
72-284
               

               
Cow position:
               
chr16:44683536-44683753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
29, 13
               

               
Conread position:
               
72-303
               

               
Cow position:
               
chr16:11940159-11939931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
28, 132
               

               
Conread position:
               
72-309
               

               
Cow position:
               
chr16:21317471-21317712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 165
               

               
Conread position:
               
72-401
               

               
Cow position:
               
chr16:17982021-17982348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 60
               

               
Conread position:
               
73-369
               

               
Cow position:
               
chr16:8076381-8076684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 245
               

               
Conread position:
               
74-462
               

               
Cow position:
               
chr16:18402806-18402431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 192
               

               
Conread position:
               
75-215
               

               
Cow position:
               
chr16:44713361-44713504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
26, 58
               

               
Conread position:
               
75-629
               

               
Cow position:
               
chr16:8438533-8439058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 143
               

               
Conread position:
               
76-251
               

               
Cow position:
               
chr16:589598-589768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
20, 74
               

               
Conread position:
               
76-279
               

               
Cow position:
               
chr16:30358945-30359147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
20, 145
               

               
Conread position:
               
76-280
               

               
Cow position:
               
chr16:13496154-13495951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
17, 38
               

               
Conread position:
               
76-309
               

               
Cow position:
               
chr16:54226482-54226715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 83
               

               
Conread position:
               
76-365
               

               
Cow position:
               
chr16:17282776-17282496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
25, 83
               

               
Conread position:
               
76-407
               

               
Cow position:
               
chr16:53830474-53830799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 84
               

               
Conread position:
               
76-460
               

               
Cow position:
               
chr16:8933310-8933682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 83
               

               
Conread position:
               
76-483
               

               
Cow position:
               
chr16:51869757-51869349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 145
               

               
Conread position:
               
76-567
               

               
Cow position:
               
chr16:32132625-32132157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 70
               

               
Conread position:
               
76-616
               

               
Cow position:
               
chr16:42340314-42339776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 145
               

               
Conread position:
               
76-629
               

               
Cow position:
               
chr16:35188367-35187810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
430
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 50
               

               
Conread position:
               
77-366
               

               
Cow position:
               
chr16:4902702-4902417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 11
               

               
Conread position:
               
77-569
               

               
Cow position:
               
chr16:46452626-46453138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 166
               

               
Conread position:
               
77-627
               

               
Cow position:
               
chr16:4399852-4399288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
431
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 24
               

               
Conread position:
               
77-629
               

               
Cow position:
               
chr16:29677517-29678078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 149
               

               
Conread position:
               
78-298
               

               
Cow position:
               
chr16:18745847-18745629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
33, 155
               

               
Conread position:
               
78-358
               

               
Cow position:
               
chr16:25380379-25380660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 144
               

               
Conread position:
               
80-365
               

               
Cow position:
               
chr16:14974430-14974703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
21, 80
               

               
Conread position:
               
80-365
               

               
Cow position:
               
chr16:22808444-22808722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
22, 144
               

               
Conread position:
               
80-382
               

               
Cow position:
               
chr16:17289061-17288756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
21, 140
               

               
Conread position:
               
80-391
               

               
Cow position:
               
chr16:6344328-6344633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
12, 73
               

               
Conread position:
               
80-451
               

               
Cow position:
               
chr16:26372837-26373205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 52
               

               
Conread position:
               
80-464
               

               
Cow position:
               
chr16:4499542-4499174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
26, 68
               

               
Conread position:
               
80-473
               

               
Cow position:
               
chr16:43505697-43506076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 83
               

               
Conread position:
               
80-579
               

               
Cow position:
               
chr16:23738294-23737796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 171
               

               
Conread position:
               
81-213
               

               
Cow position:
               
chr16:4736474-4736606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
15, 47
               

               
Conread position:
               
82-303
               

               
Cow position:
               
chr16:50667403-50667175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
82-629
               

               
Cow position:
               
chr16:23871538-23872089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 133
               

               
Conread position:
               
83-288
               

               
Cow position:
               
chr16:27160753-27160961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
83-445
               

               
Cow position:
               
chr16:45702861-45703224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 125
               

               
Conread position:
               
86-244
               

               
Cow position:
               
chr16:11477971-11478132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
130, 29
               

               
Conread position:
               
88-255
               

               
Cow position:
               
chr16:38091117-38091287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
13, 44
               

               
Conread position:
               
88-294
               

               
Cow position:
               
chr16:42176751-42176542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
30, 155
               

               
Conread position:
               
88-365
               

               
Cow position:
               
chr16:8236222-8236489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
5, 63
               

               
Conread position:
               
88-496
               

               
Cow position:
               
chr16:53627322-53627722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 132
               

               
Conread position:
               
89-294
               

               
Cow position:
               
chr16:10162921-10162716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
23, 129
               

               
Conread position:
               
92-409
               

               
Cow position:
               
chr16:12060517-12060201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
22, 121
               

               
Conread position:
               
92-465
               

               
Cow position:
               
chr16:570818-571185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 66
               

               
Conread position:
               
92-465
               

               
Cow position:
               
chr16:52889310-52889678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 48
               

               
Conread position:
               
92-629
               

               
Cow position:
               
chr16:11102720-11103283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 285
               

               
Conread position:
               
93-302
               

               
Cow position:
               
chr16:31163027-31163236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
19, 66
               

               
Conread position:
               
97-465
               

               
Cow position:
               
chr16:53891691-53892048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 91
               

               
Conread position:
               
97-466
               

               
Cow position:
               
chr16:24672264-24672628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 56
               

               
Conread position:
               
98-578
               

               
Cow position:
               
chr16:15189279-15188812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 163
               

               
Conread position:
               
99-364
               

               
Cow position:
               
chr16:50521570-50521308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 119
               

               
Conread position:
               
99-451
               

               
Cow position:
               
chr16:43661545-43661198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 163
               

               
Conread position:
               
100-628
               

               
Cow position:
               
chr16:32327751-32327222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 156
               

               
Conread position:
               
103-281
               

               
Cow position:
               
chr16:37719246-37719069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
63, 9
               

               
Conread position:
               
104-374
               

               
Cow position:
               
chr16:45693231-45692965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
90, 8
               

               
Conread position:
               
104-629
               

               
Cow position:
               
chr16:39646630-39646121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
368, 7
               

               
Conread position:
               
110-618
               

               
Cow position:
               
chr16:11105635-11105127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
263, 200
               

               
Conread position:
               
110-627
               

               
Cow position:
               
chr16:42217609-42218130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
265, 112
               

               
Conread position:
               
111-422
               

               
Cow position:
               
chr16:33790758-33791069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 39
               

               
Conread position:
               
111-456
               

               
Cow position:
               
chr16:46253606-46253948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
34, 18
               

               
Conread position:
               
112-433
               

               
Cow position:
               
chr16:53048631-53048315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 104
               

               
Conread position:
               
112-496
               

               
Cow position:
               
chr16:37380349-37379968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 206
               

               
Conread position:
               
112-614
               

               
Cow position:
               
chr16:30143121-30143637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 113
               

               
Conread position:
               
114-373
               

               
Cow position:
               
chr16:54084113-54083859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
114-629
               

               
Cow position:
               
chr16:43850754-43851268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 17
               

               
Conread position:
               
116-414
               

               
Cow position:
               
chr16:56787702-56787994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
105, 8
               

               
Conread position:
               
126-422
               

               
Cow position:
               
chr16:24747351-24747084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
126-629
               

               
Cow position:
               
chr16:4981312-4981808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 181
               

               
Conread position:
               
128-374
               

               
Cow position:
               
chr16:24637281-24637515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
34, 63
               

               
Conread position:
               
129-361
               

               
Cow position:
               
chr16:10650826-10651057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 176
               

               
Conread position:
               
129-409
               

               
Cow position:
               
chr16:22860706-22860971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 85
               

               
Conread position:
               
130-294
               

               
Cow position:
               
chr16:26841144-26840987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
130-380
               

               
Cow position:
               
chr16:21369545-21369297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
84, 43
               

               
Conread position:
               
130-434
               

               
Cow position:
               
chr16:13232888-13233182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
131-427
               

               
Cow position:
               
chr16:53595465-53595752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
244, 33
               

               
Conread position:
               
133-336
               

               
Cow position:
               
chr16:14699976-14699777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
133-398
               

               
Cow position:
               
chr16:39238004-39237742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 94
               

               
Conread position:
               
133-629
               

               
Cow position:
               
chr16:11568065-11568548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 24
               

               
Conread position:
               
135-435
               

               
Cow position:
               
chr16:45535231-45534946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
135-568
               

               
Cow position:
               
chr16:30515533-30515983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 107
               

               
Conread position:
               
138-392
               

               
Cow position:
               
chr16:10207321-10207585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
98, 24
               

               
Conread position:
               
138-477
               

               
Cow position:
               
chr16:11619802-11619475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 79
               

               
Conread position:
               
139-319
               

               
Cow position:
               
chr16:24249778-24249958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
40, 25
               

               
Conread position:
               
140-395
               

               
Cow position:
               
chr16:49404108-49404353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
236, 96
               

               
Conread position:
               
140-561
               

               
Cow position:
               
chr16:4145114-4144689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
236, 39
               

               
Conread position:
               
144-410
               

               
Cow position:
               
chr16:29400034-29399781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
165, 62
               

               
Conread position:
               
144-426
               

               
Cow position:
               
chr16:26342313-26342048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
145-396
               

               
Cow position:
               
chr16:9787633-9787361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
64, 227
               

               
Conread position:
               
145-464
               

               
Cow position:
               
chr16:46434070-46434383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 82
               

               
Conread position:
               
149-584
               

               
Cow position:
               
chr16:40305972-40305538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 10
               

               
Conread position:
               
150-618
               

               
Cow position:
               
chr16:44676914-44676463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 7
               

               
Conread position:
               
153-317
               

               
Cow position:
               
chr16:16015282-16015442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
153-513
               

               
Cow position:
               
chr16:55782430-55782781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
289, 62
               

               
Conread position:
               
154-611
               

               
Cow position:
               
chr16:7082689-7083154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 205
               

               
Conread position:
               
154-629
               

               
Cow position:
               
chr16:6692564-6693050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 69
               

               
Conread position:
               
157-279
               

               
Cow position:
               
chr16:30371625-30371507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
157-422
               

               
Cow position:
               
chr16:27249438-27249184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
244, 61
               

               
Conread position:
               
157-462
               

               
Cow position:
               
chr16:4372459-4372761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 123
               

               
Conread position:
               
157-618
               

               
Cow position:
               
chr16:24228318-24228778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
218, 56
               

               
Conread position:
               
158-431
               

               
Cow position:
               
chr16:13973253-13973515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
56, 96
               

               
Conread position:
               
158-626
               

               
Cow position:
               
chr16:23990446-23990926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 130
               

               
Conread position:
               
158-629
               

               
Cow position:
               
chr16:4712934-4712464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 58
               

               
Conread position:
               
160-481
               

               
Cow position:
               
chr16:27005234-27004914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
61, 46
               

               
Conread position:
               
161-308
               

               
Cow position:
               
chr16:30614950-30615095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
161-629
               

               
Cow position:
               
chr16:50189561-50190027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
214, 56
               

               
Conread position:
               
162-420
               

               
Cow position:
               
chr16:30706136-30705884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
214, 55
               

               
Conread position:
               
162-629
               

               
Cow position:
               
chr16:56912684-56913151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 151
               

               
Conread position:
               
164-532
               

               
Cow position:
               
chr16:13791544-13791164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
212, 100
               

               
Conread position:
               
167-387
               

               
Cow position:
               
chr16:33230100-33229883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
208, 59
               

               
Conread position:
               
167-458
               

               
Cow position:
               
chr16:22868154-22868438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 55
               

               
Conread position:
               
168-520
               

               
Cow position:
               
chr16:12249846-12249474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 50
               

               
Conread position:
               
170-439
               

               
Cow position:
               
chr16:47336756-47336487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 187
               

               
Conread position:
               
170-465
               

               
Cow position:
               
chr16:34483953-34483693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
170-480
               

               
Cow position:
               
chr16:39417099-39417390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 52
               

               
Conread position:
               
170-627
               

               
Cow position:
               
chr16:16280427-16280853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
302, 49
               

               
Conread position:
               
171-462
               

               
Cow position:
               
chr16:499118-498851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
120, 5
               

               
Conread position:
               
171-629
               

               
Cow position:
               
chr16:56150316-56149871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
249, 55
               

               
Conread position:
               
174-362
               

               
Cow position:
               
chr16:33357655-33357844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
43, 79
               

               
Conread position:
               
174-525
               

               
Cow position:
               
chr16:42253541-42253902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 265
               

               
Conread position:
               
174-529
               

               
Cow position:
               
chr16:29067178-29066830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
246, 49
               

               
Conread position:
               
174-571
               

               
Cow position:
               
chr16:22717618-22717229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 44
               

               
Conread position:
               
174-587
               

               
Cow position:
               
chr16:41037707-41037290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 44
               

               
Conread position:
               
174-628
               

               
Cow position:
               
chr16:26501175-26500726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 136
               

               
Conread position:
               
174-629
               

               
Cow position:
               
chr16:8807076-8807529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 39
               

               
Conread position:
               
174-629
               

               
Cow position:
               
chr16:30311089-30311544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 53
               

               
Conread position:
               
176-325
               

               
Cow position:
               
chr16:26068947-26068801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
61, 41
               

               
Conread position:
               
176-356
               

               
Cow position:
               
chr16:814904-814731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
170, 40
               

               
Conread position:
               
176-432
               

               
Cow position:
               
chr16:33411484-33411225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
99, 42
               

               
Conread position:
               
176-550
               

               
Cow position:
               
chr16:9790616-9790984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
232, 42
               

               
Conread position:
               
176-629
               

               
Cow position:
               
chr16:51399736-51400185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 40
               

               
Conread position:
               
177-461
               

               
Cow position:
               
chr16:7544561-7544291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
39, 60
               

               
Conread position:
               
177-556
               

               
Cow position:
               
chr16:44973508-44973123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
198, 41
               

               
Conread position:
               
177-592
               

               
Cow position:
               
chr16:4503296-4502876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 46
               

               
Conread position:
               
178-309
               

               
Cow position:
               
chr16:15888050-15888177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
178-418
               

               
Cow position:
               
chr16:47116681-47116449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
13, 46
               

               
Conread position:
               
178-434
               

               
Cow position:
               
chr16:47620392-47620142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
198, 38
               

               
Conread position:
               
178-464
               

               
Cow position:
               
chr16:53613323-53613032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 119
               

               
Conread position:
               
178-536
               

               
Cow position:
               
chr16:47509964-47510319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
198, 40
               

               
Conread position:
               
179-363
               

               
Cow position:
               
chr16:9136193-9136007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
38, 135
               

               
Conread position:
               
179-401
               

               
Cow position:
               
chr16:7928600-7928388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
53, 39
               

               
Conread position:
               
180-415
               

               
Cow position:
               
chr16:28692710-28692928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
180-590
               

               
Cow position:
               
chr16:31159561-31159970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 37
               

               
Conread position:
               
181-403
               

               
Cow position:
               
chr16:10462513-10462723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
5, 42
               

               
Conread position:
               
181-615
               

               
Cow position:
               
chr16:30209760-30209355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
370, 34
               

               
Conread position:
               
182-629
               

               
Cow position:
               
chr16:14028620-14029062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
225, 33
               

               
Conread position:
               
183-568
               

               
Cow position:
               
chr16:15867722-15868124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
200, 15
               

               
Conread position:
               
184-435
               

               
Cow position:
               
chr16:23810918-23810683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
235, 24
               

               
Conread position:
               
185-620
               

               
Cow position:
               
chr16:43804499-43804071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 32
               

               
Conread position:
               
190-471
               

               
Cow position:
               
chr16:25287690-25287964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
185, 27
               

               
Conread position:
               
191-627
               

               
Cow position:
               
chr16:39385410-39384964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 115
               

               
Conread position:
               
193-352
               

               
Cow position:
               
chr16:30078669-30078513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
200-422
               

               
Cow position:
               
chr16:51530976-51531198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
86, 23
               

               
Conread position:
               
208-455
               

               
Cow position:
               
chr16:52182251-52182026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
100, 25
               

               
Conread position:
               
213-507
               

               
Cow position:
               
chr16:18496181-18496481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 232
               

               
Conread position:
               
226-386
               

               
Cow position:
               
chr16:7600219-7600055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
88, 122
               

               
Conread position:
               
226-473
               

               
Cow position:
               
chr16:33752163-33751921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
192, 85
               

               
Conread position:
               
226-617
               

               
Cow position:
               
chr16:30939701-30939315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 86
               

               
Conread position:
               
227-360
               

               
Cow position:
               
chr16:30045885-30045750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
227-433
               

               
Cow position:
               
chr16:24616750-24616546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
148, 71
               

               
Conread position:
               
228-618
               

               
Cow position:
               
chr16:47017284-47017664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 25
               

               
Conread position:
               
230-365
               

               
Cow position:
               
chr16:22319477-22319613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
231-523
               

               
Cow position:
               
chr16:56198484-56198192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
142, 80
               

               
Conread position:
               
236-402
               

               
Cow position:
               
chr16:32869502-32869334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
73, 141
               

               
Conread position:
               
240-515
               

               
Cow position:
               
chr16:589964-590227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 70
               

               
Conread position:
               
243-619
               

               
Cow position:
               
chr16:53224864-53225232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 89
               

               
Conread position:
               
246-370
               

               
Cow position:
               
chr16:7930706-7930583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
248-464
               

               
Cow position:
               
chr16:25484309-25484099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
208, 62
               

               
Conread position:
               
248-465
               

               
Cow position:
               
chr16:24403684-24403462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 199
               

               
Conread position:
               
250-462
               

               
Cow position:
               
chr16:901940-902152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
84, 53
               

               
Conread position:
               
252-629
               

               
Cow position:
               
chr16:15363685-15363315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 51
               
Show alignments to all cow chromosomes.