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Cow genome map

           
Conread name:
           
rnca33b_d16.y1
        

               
Conread position:
               
1-106
               

               
Cow position:
               
chr17:20930534-20930431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
99, 72
               

               
Conread position:
               
1-131
               

               
Cow position:
               
chr17:22772891-22773027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
1-144
               

               
Cow position:
               
chr17:31736271-31736419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
1-145
               

               
Cow position:
               
chr17:14668736-14668588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr17:34188110-34187960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
1-150
               

               
Cow position:
               
chr17:26849537-26849689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
72, 22
               

               
Conread position:
               
1-151
               

               
Cow position:
               
chr17:27258658-27258502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
1-154
               

               
Cow position:
               
chr17:15103511-15103663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
99, 20
               

               
Conread position:
               
1-154
               

               
Cow position:
               
chr17:27565794-27565636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
1-159
               

               
Cow position:
               
chr17:6767026-6767189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
1-159
               

               
Cow position:
               
chr17:24898436-24898272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
85, 71
               

               
Conread position:
               
1-159
               

               
Cow position:
               
chr17:30108661-30108511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
110, 56
               

               
Conread position:
               
1-160
               

               
Cow position:
               
chr17:37973827-37973996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
1-163
               

               
Cow position:
               
chr17:40277728-40277892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
72, 85
               

               
Conread position:
               
1-164
               

               
Cow position:
               
chr17:20836321-20836158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
94, 71
               

               
Conread position:
               
1-166
               

               
Cow position:
               
chr17:11269543-11269709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
72, 158
               

               
Conread position:
               
1-166
               

               
Cow position:
               
chr17:35922124-35921955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
72, 157
               

               
Conread position:
               
1-167
               

               
Cow position:
               
chr17:26554747-26554587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
92, 18
               

               
Conread position:
               
1-168
               

               
Cow position:
               
chr17:5857337-5857511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
78, 25
               

               
Conread position:
               
1-168
               

               
Cow position:
               
chr17:9260380-9260550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
99, 71
               

               
Conread position:
               
1-168
               

               
Cow position:
               
chr17:10454352-10454523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
1-168
               

               
Cow position:
               
chr17:20741792-20741961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
71, 132
               

               
Conread position:
               
1-168
               

               
Cow position:
               
chr17:21236756-21236585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
1-172
               

               
Cow position:
               
chr17:32962432-32962607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
1-173
               

               
Cow position:
               
chr17:1081439-1081262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
1-173
               

               
Cow position:
               
chr17:21181685-21181509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
1-173
               

               
Cow position:
               
chr17:43323311-43323487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
1-174
               

               
Cow position:
               
chr17:2729686-2729855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
72, 77
               

               
Conread position:
               
1-174
               

               
Cow position:
               
chr17:7711667-7711494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
65, 73
               

               
Conread position:
               
1-174
               

               
Cow position:
               
chr17:15334262-15334436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
72, 151
               

               
Conread position:
               
1-175
               

               
Cow position:
               
chr17:6978945-6979121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
72, 12
               

               
Conread position:
               
1-175
               

               
Cow position:
               
chr17:15154653-15154834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
1-178
               

               
Cow position:
               
chr17:36573888-36574070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
1-179
               

               
Cow position:
               
chr17:6761623-6761796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
88, 58
               

               
Conread position:
               
1-179
               

               
Cow position:
               
chr17:9077982-9078169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr17:10221976-10222159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr17:38169512-38169696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
1-182
               

               
Cow position:
               
chr17:10016508-10016328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
117, 71
               

               
Conread position:
               
1-183
               

               
Cow position:
               
chr17:6787171-6786984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
1-184
               

               
Cow position:
               
chr17:7732886-7733071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
72, 22
               

               
Conread position:
               
1-184
               

               
Cow position:
               
chr17:11055936-11056114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
92, 71
               

               
Conread position:
               
1-184
               

               
Cow position:
               
chr17:28795749-28795936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
1-187
               

               
Cow position:
               
chr17:26225259-26225071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
99, 71
               

               
Conread position:
               
1-188
               

               
Cow position:
               
chr17:20306564-20306369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
72, 152
               

               
Conread position:
               
1-188
               

               
Cow position:
               
chr17:38124958-38125149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
1-188
               

               
Cow position:
               
chr17:39964109-39963920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 99
               

               
Conread position:
               
1-189
               

               
Cow position:
               
chr17:13290942-13291131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
72, 157
               

               
Conread position:
               
1-189
               

               
Cow position:
               
chr17:36522813-36523005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
1-190
               

               
Cow position:
               
chr17:30900546-30900353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
72, 176
               

               
Conread position:
               
1-191
               

               
Cow position:
               
chr17:19899131-19898932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
62, 189
               

               
Conread position:
               
1-192
               

               
Cow position:
               
chr17:21718766-21718958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
99, 71
               

               
Conread position:
               
1-195
               

               
Cow position:
               
chr17:25702835-25702635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr17:40412810-40412617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
109, 72
               

               
Conread position:
               
1-201
               

               
Cow position:
               
chr17:14024397-14024601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
1-204
               

               
Cow position:
               
chr17:946587-946384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
93, 72
               

               
Conread position:
               
1-205
               

               
Cow position:
               
chr17:33653462-33653664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-206
               

               
Cow position:
               
chr17:13414134-13414344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr17:21777959-21777743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
71, 129
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr17:28465658-28465447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
1-208
               

               
Cow position:
               
chr17:12249002-12249206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
72, 129
               

               
Conread position:
               
1-209
               

               
Cow position:
               
chr17:20929475-20929263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
1-210
               

               
Cow position:
               
chr17:27292223-27292436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr17:7758057-7758255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
93, 110
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chr17:32143320-32143106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
72, 179
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr17:22076404-22076186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
1-216
               

               
Cow position:
               
chr17:26561907-26562128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
71, 80
               

               
Conread position:
               
1-219
               

               
Cow position:
               
chr17:7959410-7959191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
99, 72
               

               
Conread position:
               
1-219
               

               
Cow position:
               
chr17:22223945-22223711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
99, 58
               

               
Conread position:
               
1-220
               

               
Cow position:
               
chr17:27440408-27440187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
33, 76
               

               
Conread position:
               
1-220
               

               
Cow position:
               
chr17:43315059-43315275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
72, 31
               

               
Conread position:
               
1-221
               

               
Cow position:
               
chr17:15355165-15354941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
1-221
               

               
Cow position:
               
chr17:20904876-20905089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
92, 57
               

               
Conread position:
               
1-223
               

               
Cow position:
               
chr17:24582433-24582210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
71, 203
               

               
Conread position:
               
1-229
               

               
Cow position:
               
chr17:42150619-42150392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
99, 72
               

               
Conread position:
               
1-230
               

               
Cow position:
               
chr17:37857458-37857692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
1-233
               

               
Cow position:
               
chr17:4817761-4817525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
67, 78
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr17:4264457-4264215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
1-239
               

               
Cow position:
               
chr17:24841928-24841691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 24
               

               
Conread position:
               
1-243
               

               
Cow position:
               
chr17:17044104-17044343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
54, 71
               

               
Conread position:
               
1-243
               

               
Cow position:
               
chr17:19783287-19783048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
72, 113
               

               
Conread position:
               
1-243
               

               
Cow position:
               
chr17:37340800-37341051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
82, 72
               

               
Conread position:
               
1-245
               

               
Cow position:
               
chr17:22189662-22189426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
92, 65
               

               
Conread position:
               
1-247
               

               
Cow position:
               
chr17:32332861-32333106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
77, 25
               

               
Conread position:
               
1-248
               

               
Cow position:
               
chr17:25511473-25511227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
99, 71
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr17:21015218-21014963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
72, 45
               

               
Conread position:
               
1-251
               

               
Cow position:
               
chr17:24119860-24120110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
78, 102
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr17:29995204-29995458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
85, 72
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr17:8516350-8516608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
71, 57
               

               
Conread position:
               
1-255
               

               
Cow position:
               
chr17:25584475-25584217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 166
               

               
Conread position:
               
1-255
               

               
Cow position:
               
chr17:40383975-40384226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
57, 139
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr17:4699480-4699749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
71, 225
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr17:9950425-9950694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
72, 227
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr17:35149296-35149558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 176
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr17:25886063-25885790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr17:25473050-25473316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
99, 58
               

               
Conread position:
               
1-272
               

               
Cow position:
               
chr17:28982408-28982140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 96
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr17:9932080-9932344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
87, 70
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr17:31559802-31559533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
72, 86
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr17:25800653-25800925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
91, 72
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr17:35051851-35051563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
67, 236
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr17:35193586-35193871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
71, 212
               

               
Conread position:
               
1-278
               

               
Cow position:
               
chr17:33067336-33067605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
72, 132
               

               
Conread position:
               
1-278
               

               
Cow position:
               
chr17:33154927-33155200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
99, 66
               

               
Conread position:
               
1-281
               

               
Cow position:
               
chr17:18934487-18934209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
92, 18
               

               
Conread position:
               
1-281
               

               
Cow position:
               
chr17:21039787-21039516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
92, 72
               

               
Conread position:
               
1-284
               

               
Cow position:
               
chr17:22051360-22051643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
99, 72
               

               
Conread position:
               
1-284
               

               
Cow position:
               
chr17:39606653-39606379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
99, 23
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr17:17772187-17772480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
72, 233
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr17:26513422-26513134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
72, 12
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr17:3389065-3388768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
61, 166
               

               
Conread position:
               
1-290
               

               
Cow position:
               
chr17:9770736-9770454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 158
               

               
Conread position:
               
1-292
               

               
Cow position:
               
chr17:5372301-5372588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
99, 67
               

               
Conread position:
               
1-294
               

               
Cow position:
               
chr17:1025603-1025881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
99, 56
               

               
Conread position:
               
1-296
               

               
Cow position:
               
chr17:5288395-5288106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 69
               

               
Conread position:
               
1-297
               

               
Cow position:
               
chr17:10478036-10477718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
1-299
               

               
Cow position:
               
chr17:3153337-3153637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
59, 136
               

               
Conread position:
               
1-299
               

               
Cow position:
               
chr17:24751143-24750851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
58, 23
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr17:40639178-40638883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
66, 28
               

               
Conread position:
               
1-301
               

               
Cow position:
               
chr17:3883511-3883815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
72, 188
               

               
Conread position:
               
1-302
               

               
Cow position:
               
chr17:26448774-26448473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
92, 77
               

               
Conread position:
               
1-303
               

               
Cow position:
               
chr17:21806218-21806519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 220
               

               
Conread position:
               
1-303
               

               
Cow position:
               
chr17:36864854-36864561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 74
               

               
Conread position:
               
1-307
               

               
Cow position:
               
chr17:11994789-11995105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
57, 235
               

               
Conread position:
               
1-307
               

               
Cow position:
               
chr17:27730777-27730466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
72, 241
               

               
Conread position:
               
1-309
               

               
Cow position:
               
chr17:1466185-1466505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 12
               

               
Conread position:
               
1-309
               

               
Cow position:
               
chr17:1469597-1469301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 61
               

               
Conread position:
               
1-311
               

               
Cow position:
               
chr17:36814596-36814282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 222
               

               
Conread position:
               
1-316
               

               
Cow position:
               
chr17:8597878-8598189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
94, 72
               

               
Conread position:
               
1-319
               

               
Cow position:
               
chr17:9824898-9824582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 73
               

               
Conread position:
               
1-319
               

               
Cow position:
               
chr17:25709946-25709618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
70, 227
               

               
Conread position:
               
1-331
               

               
Cow position:
               
chr17:21744167-21743842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 56
               

               
Conread position:
               
1-332
               

               
Cow position:
               
chr17:11912274-11912594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
99, 71
               

               
Conread position:
               
1-341
               

               
Cow position:
               
chr17:20335877-20335557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
100, 50
               

               
Conread position:
               
1-346
               

               
Cow position:
               
chr17:25616476-25616148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
21, 52
               

               
Conread position:
               
1-346
               

               
Cow position:
               
chr17:34860604-34860271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
72, 50
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr17:36178819-36179135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
88, 26
               

               
Conread position:
               
1-350
               

               
Cow position:
               
chr17:24559524-24559178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 221
               

               
Conread position:
               
1-352
               

               
Cow position:
               
chr17:1040959-1040629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
1-353
               

               
Cow position:
               
chr17:31856903-31856545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 85
               

               
Conread position:
               
1-364
               

               
Cow position:
               
chr17:27183711-27184069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 38
               

               
Conread position:
               
1-368
               

               
Cow position:
               
chr17:6318637-6318990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
99, 72
               

               
Conread position:
               
1-369
               

               
Cow position:
               
chr17:40673604-40673252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 221
               

               
Conread position:
               
1-373
               

               
Cow position:
               
chr17:26233596-26233964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 214
               

               
Conread position:
               
1-373
               

               
Cow position:
               
chr17:32280899-32280531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 135
               

               
Conread position:
               
1-375
               

               
Cow position:
               
chr17:5143941-5144308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 68
               

               
Conread position:
               
1-379
               

               
Cow position:
               
chr17:30728738-30728377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 208
               

               
Conread position:
               
1-386
               

               
Cow position:
               
chr17:25118118-25117742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 217
               

               
Conread position:
               
1-390
               

               
Cow position:
               
chr17:31037146-31037532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 12
               

               
Conread position:
               
1-391
               

               
Cow position:
               
chr17:5870508-5870905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 25
               

               
Conread position:
               
1-393
               

               
Cow position:
               
chr17:9965791-9966188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 224
               

               
Conread position:
               
1-395
               

               
Cow position:
               
chr17:18146421-18146025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 72
               

               
Conread position:
               
1-397
               

               
Cow position:
               
chr17:26631576-26631975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 147
               

               
Conread position:
               
1-398
               

               
Cow position:
               
chr17:28468355-28467976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 80
               

               
Conread position:
               
1-400
               

               
Cow position:
               
chr17:1562560-1562936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 59
               

               
Conread position:
               
1-400
               

               
Cow position:
               
chr17:7143088-7142702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 71
               

               
Conread position:
               
1-400
               

               
Cow position:
               
chr17:27058318-27058715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 227
               

               
Conread position:
               
1-405
               

               
Cow position:
               
chr17:29356012-29356386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
99, 67
               

               
Conread position:
               
1-410
               

               
Cow position:
               
chr17:1634262-1634654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 67
               

               
Conread position:
               
1-420
               

               
Cow position:
               
chr17:12946128-12946548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 68
               

               
Conread position:
               
1-425
               

               
Cow position:
               
chr17:8836720-8837136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 17
               

               
Conread position:
               
1-429
               

               
Cow position:
               
chr17:3202180-3202592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
70, 173
               

               
Conread position:
               
1-432
               

               
Cow position:
               
chr17:26000350-25999923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 89
               

               
Conread position:
               
1-433
               

               
Cow position:
               
chr17:1256267-1256699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 213
               

               
Conread position:
               
1-440
               

               
Cow position:
               
chr17:27429787-27429375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 46
               

               
Conread position:
               
1-445
               

               
Cow position:
               
chr17:12447171-12447606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 57
               

               
Conread position:
               
1-447
               

               
Cow position:
               
chr17:32278673-32279116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 135
               

               
Conread position:
               
1-450
               

               
Cow position:
               
chr17:40741885-40741435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 70
               

               
Conread position:
               
1-454
               

               
Cow position:
               
chr17:7437402-7436950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 139
               

               
Conread position:
               
1-455
               

               
Cow position:
               
chr17:33053085-33052646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 25
               

               
Conread position:
               
1-456
               

               
Cow position:
               
chr17:21738634-21739102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 222
               

               
Conread position:
               
1-456
               

               
Cow position:
               
chr17:24004604-24004177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
83, 57
               

               
Conread position:
               
1-456
               

               
Cow position:
               
chr17:25128123-25128567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 72
               

               
Conread position:
               
1-456
               

               
Cow position:
               
chr17:30713577-30713135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 81
               

               
Conread position:
               
1-461
               

               
Cow position:
               
chr17:20157839-20157394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 71
               

               
Conread position:
               
1-461
               

               
Cow position:
               
chr17:41289813-41290240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 74
               

               
Conread position:
               
1-464
               

               
Cow position:
               
chr17:11831887-11832362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 71
               

               
Conread position:
               
1-464
               

               
Cow position:
               
chr17:24587854-24587392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 68
               

               
Conread position:
               
1-464
               

               
Cow position:
               
chr17:34948868-34948414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 160
               

               
Conread position:
               
1-465
               

               
Cow position:
               
chr17:6423985-6423534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 77
               

               
Conread position:
               
1-465
               

               
Cow position:
               
chr17:7132193-7132682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 335
               

               
Conread position:
               
1-465
               

               
Cow position:
               
chr17:15684734-15684278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 25
               

               
Conread position:
               
1-471
               

               
Cow position:
               
chr17:21003600-21004064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 74
               

               
Conread position:
               
1-471
               

               
Cow position:
               
chr17:32418886-32419352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 67
               

               
Conread position:
               
1-473
               

               
Cow position:
               
chr17:44146742-44147207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 49
               

               
Conread position:
               
1-474
               

               
Cow position:
               
chr17:33793383-33792943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
99, 26
               

               
Conread position:
               
1-497
               

               
Cow position:
               
chr17:11277796-11278284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 19
               

               
Conread position:
               
1-516
               

               
Cow position:
               
chr17:22032457-22032967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 228
               

               
Conread position:
               
1-518
               

               
Cow position:
               
chr17:18720221-18720730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 42
               

               
Conread position:
               
1-523
               

               
Cow position:
               
chr17:13243823-13244311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 12
               

               
Conread position:
               
1-531
               

               
Cow position:
               
chr17:15664907-15664370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 67
               

               
Conread position:
               
1-532
               

               
Cow position:
               
chr17:24974174-24973650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 70
               

               
Conread position:
               
1-532
               

               
Cow position:
               
chr17:38615194-38614660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 239
               

               
Conread position:
               
1-539
               

               
Cow position:
               
chr17:40312930-40312425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 54
               

               
Conread position:
               
1-547
               

               
Cow position:
               
chr17:25901439-25900884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 311
               

               
Conread position:
               
1-557
               

               
Cow position:
               
chr17:18490764-18490210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 90
               

               
Conread position:
               
1-561
               

               
Cow position:
               
chr17:25875626-25875082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
577
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 71
               

               
Conread position:
               
1-562
               

               
Cow position:
               
chr17:27795886-27795317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
584
               

               
Alignm identity:
               
458
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 80
               

               
Conread position:
               
1-565
               

               
Cow position:
               
chr17:24883339-24883897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 71
               

               
Conread position:
               
1-566
               

               
Cow position:
               
chr17:17682683-17683229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 54
               

               
Conread position:
               
1-578
               

               
Cow position:
               
chr17:43717109-43717655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
592
               

               
Alignm identity:
               
444
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 22
               

               
Conread position:
               
1-579
               

               
Cow position:
               
chr17:9854213-9853638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
596
               

               
Alignm identity:
               
440
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 162
               

               
Conread position:
               
1-584
               

               
Cow position:
               
chr17:11296870-11296302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
598
               

               
Alignm identity:
               
429
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 63
               

               
Conread position:
               
1-587
               

               
Cow position:
               
chr17:15102658-15103235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
598
               

               
Alignm identity:
               
431
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 222
               

               
Conread position:
               
1-598
               

               
Cow position:
               
chr17:20032677-20033279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
611
               

               
Alignm identity:
               
456
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 222
               

               
Conread position:
               
1-601
               

               
Cow position:
               
chr17:25608286-25608876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
615
               

               
Alignm identity:
               
449
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 132
               

               
Conread position:
               
1-606
               

               
Cow position:
               
chr17:21959452-21960053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
618
               

               
Alignm identity:
               
466
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 218
               

               
Conread position:
               
1-608
               

               
Cow position:
               
chr17:6936447-6937034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
624
               

               
Alignm identity:
               
467
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 72
               

               
Conread position:
               
1-608
               

               
Cow position:
               
chr17:22564409-22563812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
625
               

               
Alignm identity:
               
465
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 38
               

               
Conread position:
               
1-609
               

               
Cow position:
               
chr17:26818241-26818810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
614
               

               
Alignm identity:
               
441
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
375, 67
               

               
Conread position:
               
1-615
               

               
Cow position:
               
chr17:5731149-5730543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
631
               

               
Alignm identity:
               
440
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 81
               

               
Conread position:
               
1-618
               

               
Cow position:
               
chr17:17180276-17179656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
642
               

               
Alignm identity:
               
455
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 36
               

               
Conread position:
               
1-619
               

               
Cow position:
               
chr17:11839954-11839313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
649
               

               
Alignm identity:
               
492
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 72
               

               
Conread position:
               
1-627
               

               
Cow position:
               
chr17:18201992-18201381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
638
               

               
Alignm identity:
               
475
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 73
               

               
Conread position:
               
1-627
               

               
Cow position:
               
chr17:32027216-32027855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
644
               

               
Alignm identity:
               
476
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 450
               

               
Conread position:
               
1-627
               

               
Cow position:
               
chr17:33271439-33272058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
656
               

               
Alignm identity:
               
477
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 69
               

               
Conread position:
               
1-627
               

               
Cow position:
               
chr17:36265015-36265629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
643
               

               
Alignm identity:
               
435
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 28
               

               
Conread position:
               
1-628
               

               
Cow position:
               
chr17:5898293-5898923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
648
               

               
Alignm identity:
               
475
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 231
               

               
Conread position:
               
1-628
               

               
Cow position:
               
chr17:20992807-20993439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
645
               

               
Alignm identity:
               
507
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 90
               

               
Conread position:
               
1-629
               

               
Cow position:
               
chr17:11101587-11102187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
638
               

               
Alignm identity:
               
471
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
375, 72
               

               
Conread position:
               
1-629
               

               
Cow position:
               
chr17:14033410-14034045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
646
               

               
Alignm identity:
               
497
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 54
               

               
Conread position:
               
1-629
               

               
Cow position:
               
chr17:16446195-16446829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
651
               

               
Alignm identity:
               
477
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 228
               

               
Conread position:
               
1-629
               

               
Cow position:
               
chr17:17222575-17221947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
641
               

               
Alignm identity:
               
486
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 221
               

               
Conread position:
               
1-629
               

               
Cow position:
               
chr17:20092898-20093521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
648
               

               
Alignm identity:
               
472
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 68
               

               
Conread position:
               
1-629
               

               
Cow position:
               
chr17:20801045-20800418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
642
               

               
Alignm identity:
               
483
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 25
               

               
Conread position:
               
1-629
               

               
Cow position:
               
chr17:21972896-21973529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
641
               

               
Alignm identity:
               
473
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 314
               

               
Conread position:
               
1-629
               

               
Cow position:
               
chr17:22775601-22774992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
644
               

               
Alignm identity:
               
467
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 25
               

               
Conread position:
               
1-629
               

               
Cow position:
               
chr17:23063953-23063317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
646
               

               
Alignm identity:
               
478
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 155
               

               
Conread position:
               
1-629
               

               
Cow position:
               
chr17:24824477-24823867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
643
               

               
Alignm identity:
               
449
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 22
               

               
Conread position:
               
1-629
               

               
Cow position:
               
chr17:32138185-32138794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
645
               

               
Alignm identity:
               
472
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 87
               

               
Conread position:
               
1-629
               

               
Cow position:
               
chr17:40772061-40771427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
645
               

               
Alignm identity:
               
487
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 72
               

               
Conread position:
               
2-110
               

               
Cow position:
               
chr17:24826853-24826963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
2-139
               

               
Cow position:
               
chr17:34371855-34371998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
2-145
               

               
Cow position:
               
chr17:7865055-7864910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
91, 65
               

               
Conread position:
               
2-154
               

               
Cow position:
               
chr17:36943593-36943446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
108, 66
               

               
Conread position:
               
2-158
               

               
Cow position:
               
chr17:10630751-10630910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
66, 71
               

               
Conread position:
               
2-167
               

               
Cow position:
               
chr17:19544002-19544169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
98, 70
               

               
Conread position:
               
2-169
               

               
Cow position:
               
chr17:9900133-9899965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
71, 61
               

               
Conread position:
               
2-170
               

               
Cow position:
               
chr17:20359346-20359173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
2-173
               

               
Cow position:
               
chr17:14882782-14882952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
69, 22
               

               
Conread position:
               
2-175
               

               
Cow position:
               
chr17:17418707-17418527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
2-175
               

               
Cow position:
               
chr17:33140615-33140438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
2-178
               

               
Cow position:
               
chr17:5761919-5762102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
68, 165
               

               
Conread position:
               
2-186
               

               
Cow position:
               
chr17:24947565-24947378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
2-188
               

               
Cow position:
               
chr17:15883905-15883714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
2-192
               

               
Cow position:
               
chr17:3364819-3364629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
91, 64
               

               
Conread position:
               
2-197
               

               
Cow position:
               
chr17:10414723-10414532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
94, 66
               

               
Conread position:
               
2-218
               

               
Cow position:
               
chr17:36712485-36712701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
69, 178
               

               
Conread position:
               
2-220
               

               
Cow position:
               
chr17:7810517-7810744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
2-256
               

               
Cow position:
               
chr17:38869742-38869998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
70, 159
               

               
Conread position:
               
2-298
               

               
Cow position:
               
chr17:40694203-40694504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
70, 228
               

               
Conread position:
               
2-298
               

               
Cow position:
               
chr17:44107939-44108217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
99, 25
               

               
Conread position:
               
2-323
               

               
Cow position:
               
chr17:25342510-25342828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 84
               

               
Conread position:
               
2-332
               

               
Cow position:
               
chr17:3354099-3353784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
29, 56
               

               
Conread position:
               
2-337
               

               
Cow position:
               
chr17:21325574-21325231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 230
               

               
Conread position:
               
2-346
               

               
Cow position:
               
chr17:15303743-15304098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 291
               

               
Conread position:
               
2-373
               

               
Cow position:
               
chr17:11962304-11962687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 85
               

               
Conread position:
               
2-397
               

               
Cow position:
               
chr17:25917116-25916733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 25
               

               
Conread position:
               
2-403
               

               
Cow position:
               
chr17:34650693-34650278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 406
               

               
Conread position:
               
2-422
               

               
Cow position:
               
chr17:10458704-10459119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 40
               

               
Conread position:
               
2-433
               

               
Cow position:
               
chr17:12109038-12108608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 221
               

               
Conread position:
               
2-447
               

               
Cow position:
               
chr17:10447143-10446707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 203
               

               
Conread position:
               
2-464
               

               
Cow position:
               
chr17:36791354-36790922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 21
               

               
Conread position:
               
2-473
               

               
Cow position:
               
chr17:11664347-11664823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 289
               

               
Conread position:
               
2-489
               

               
Cow position:
               
chr17:37163315-37163783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 89
               

               
Conread position:
               
2-497
               

               
Cow position:
               
chr17:21114725-21115207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 71
               

               
Conread position:
               
2-558
               

               
Cow position:
               
chr17:5280420-5280969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 169
               

               
Conread position:
               
2-561
               

               
Cow position:
               
chr17:11397897-11397340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
444
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 70
               

               
Conread position:
               
2-627
               

               
Cow position:
               
chr17:11381495-11382111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
640
               

               
Alignm identity:
               
469
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 194
               

               
Conread position:
               
2-627
               

               
Cow position:
               
chr17:29472687-29472086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
632
               

               
Alignm identity:
               
458
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 27
               

               
Conread position:
               
2-629
               

               
Cow position:
               
chr17:10528500-10529142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
647
               

               
Alignm identity:
               
461
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 99
               

               
Conread position:
               
2-629
               

               
Cow position:
               
chr17:11618817-11618183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
642
               

               
Alignm identity:
               
497
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 166
               

               
Conread position:
               
3-110
               

               
Cow position:
               
chr17:4271130-4271240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
3-131
               

               
Cow position:
               
chr17:30156191-30156321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
70, 41
               

               
Conread position:
               
3-140
               

               
Cow position:
               
chr17:10037639-10037498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
3-144
               

               
Cow position:
               
chr17:17822316-17822177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
97, 68
               

               
Conread position:
               
3-151
               

               
Cow position:
               
chr17:43970929-43971073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
84, 20
               

               
Conread position:
               
3-169
               

               
Cow position:
               
chr17:26183576-26183406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
3-173
               

               
Cow position:
               
chr17:7037391-7037566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
3-174
               

               
Cow position:
               
chr17:22081294-22081459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
3-174
               

               
Cow position:
               
chr17:42780090-42780268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
3-178
               

               
Cow position:
               
chr17:11920933-11921112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
3-178
               

               
Cow position:
               
chr17:12963385-12963554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
3-178
               

               
Cow position:
               
chr17:19471544-19471718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
90, 56
               

               
Conread position:
               
3-182
               

               
Cow position:
               
chr17:3387948-3387759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
3-182
               

               
Cow position:
               
chr17:5027235-5027411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
90, 70
               

               
Conread position:
               
3-188
               

               
Cow position:
               
chr17:21677120-21676933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
3-188
               

               
Cow position:
               
chr17:32220653-32220843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
3-189
               

               
Cow position:
               
chr17:32978708-32978892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
90, 56
               

               
Conread position:
               
3-189
               

               
Cow position:
               
chr17:35457589-35457774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
111, 69
               

               
Conread position:
               
3-191
               

               
Cow position:
               
chr17:27646896-27647085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
70, 23
               

               
Conread position:
               
3-191
               

               
Cow position:
               
chr17:37552795-37552987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
3-210
               

               
Cow position:
               
chr17:18673808-18674008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
70, 138
               

               
Conread position:
               
3-213
               

               
Cow position:
               
chr17:24877335-24877122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
70, 20
               

               
Conread position:
               
3-214
               

               
Cow position:
               
chr17:37096159-37095936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
3-216
               

               
Cow position:
               
chr17:21788415-21788644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
3-216
               

               
Cow position:
               
chr17:25587235-25587441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
109, 26
               

               
Conread position:
               
3-216
               

               
Cow position:
               
chr17:26072529-26072746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
3-239
               

               
Cow position:
               
chr17:9509765-9510003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
70, 24
               

               
Conread position:
               
3-243
               

               
Cow position:
               
chr17:16868046-16868279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
109, 66
               

               
Conread position:
               
3-251
               

               
Cow position:
               
chr17:33164591-33164835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
97, 68
               

               
Conread position:
               
3-263
               

               
Cow position:
               
chr17:18267489-18267225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
70, 34
               

               
Conread position:
               
3-266
               

               
Cow position:
               
chr17:7571335-7571066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
3-270
               

               
Cow position:
               
chr17:36432128-36431857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
3-274
               

               
Cow position:
               
chr17:26574993-26575274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
70, 75
               

               
Conread position:
               
3-279
               

               
Cow position:
               
chr17:37815961-37816236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
37, 21
               

               
Conread position:
               
3-281
               

               
Cow position:
               
chr17:23280628-23280905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 38
               

               
Conread position:
               
3-282
               

               
Cow position:
               
chr17:26757215-26757511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
3-309
               

               
Cow position:
               
chr17:17193719-17193418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
54, 147
               

               
Conread position:
               
3-345
               

               
Cow position:
               
chr17:25513889-25514232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
70, 203
               

               
Conread position:
               
3-350
               

               
Cow position:
               
chr17:23563583-23563904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
143, 70
               

               
Conread position:
               
3-352
               

               
Cow position:
               
chr17:9056470-9056820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 72
               

               
Conread position:
               
3-359
               

               
Cow position:
               
chr17:7802943-7803295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 227
               

               
Conread position:
               
3-360
               

               
Cow position:
               
chr17:32349292-32348949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 70
               

               
Conread position:
               
3-362
               

               
Cow position:
               
chr17:4299713-4300045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
98, 57
               

               
Conread position:
               
3-373
               

               
Cow position:
               
chr17:31581699-31581346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
69, 174
               

               
Conread position:
               
3-374
               

               
Cow position:
               
chr17:29026304-29025925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 220
               

               
Conread position:
               
3-392
               

               
Cow position:
               
chr17:3467980-3467615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
90, 68
               

               
Conread position:
               
3-392
               

               
Cow position:
               
chr17:4786252-4786650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 229
               

               
Conread position:
               
3-405
               

               
Cow position:
               
chr17:12306171-12306563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 72
               

               
Conread position:
               
3-422
               

               
Cow position:
               
chr17:908968-908562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 65
               

               
Conread position:
               
3-422
               

               
Cow position:
               
chr17:36454549-36454948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 162
               

               
Conread position:
               
3-430
               

               
Cow position:
               
chr17:33275530-33275938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 67
               

               
Conread position:
               
3-434
               

               
Cow position:
               
chr17:5514986-5514562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 110
               

               
Conread position:
               
3-435
               

               
Cow position:
               
chr17:21599451-21599880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 206
               

               
Conread position:
               
3-439
               

               
Cow position:
               
chr17:25612316-25611892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 65
               

               
Conread position:
               
3-464
               

               
Cow position:
               
chr17:36275565-36275131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 23
               

               
Conread position:
               
3-465
               

               
Cow position:
               
chr17:17410529-17410071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 322
               

               
Conread position:
               
3-493
               

               
Cow position:
               
chr17:31480801-31481297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 94
               

               
Conread position:
               
3-530
               

               
Cow position:
               
chr17:28284807-28285317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 21
               

               
Conread position:
               
3-537
               

               
Cow position:
               
chr17:40332008-40331464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 169
               

               
Conread position:
               
3-538
               

               
Cow position:
               
chr17:20090400-20090924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 221
               

               
Conread position:
               
3-585
               

               
Cow position:
               
chr17:25815824-25815254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
597
               

               
Alignm identity:
               
451
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 114
               

               
Conread position:
               
3-611
               

               
Cow position:
               
chr17:13922711-13922099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
621
               

               
Alignm identity:
               
451
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 99
               

               
Conread position:
               
3-611
               

               
Cow position:
               
chr17:13940089-13940700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
621
               

               
Alignm identity:
               
451
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 228
               

               
Conread position:
               
3-618
               

               
Cow position:
               
chr17:11215664-11216266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
625
               

               
Alignm identity:
               
455
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 74
               

               
Conread position:
               
3-627
               

               
Cow position:
               
chr17:30529318-30529924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
637
               

               
Alignm identity:
               
478
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 69
               

               
Conread position:
               
3-629
               

               
Cow position:
               
chr17:12289181-12289817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
653
               

               
Alignm identity:
               
499
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 16
               

               
Conread position:
               
3-629
               

               
Cow position:
               
chr17:14004053-14003432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
650
               

               
Alignm identity:
               
493
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 72
               

               
Conread position:
               
3-629
               

               
Cow position:
               
chr17:18860515-18861116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
635
               

               
Alignm identity:
               
506
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
417, 7
               

               
Conread position:
               
3-629
               

               
Cow position:
               
chr17:20022285-20022908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
641
               

               
Alignm identity:
               
450
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 72
               

               
Conread position:
               
3-629
               

               
Cow position:
               
chr17:26231194-26230541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
655
               

               
Alignm identity:
               
504
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 458
               

               
Conread position:
               
3-629
               

               
Cow position:
               
chr17:33933519-33934144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
649
               

               
Alignm identity:
               
462
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 71
               

               
Conread position:
               
4-154
               

               
Cow position:
               
chr17:17782280-17782132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
85, 19
               

               
Conread position:
               
4-156
               

               
Cow position:
               
chr17:38736659-38736513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
96, 68
               

               
Conread position:
               
4-164
               

               
Cow position:
               
chr17:21910303-21910467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
68, 82
               

               
Conread position:
               
4-182
               

               
Cow position:
               
chr17:16438489-16438672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
53, 6
               

               
Conread position:
               
4-203
               

               
Cow position:
               
chr17:21466030-21466235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
4-203
               

               
Cow position:
               
chr17:42361737-42361533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
4-207
               

               
Cow position:
               
chr17:10873680-10873475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
86, 141
               

               
Conread position:
               
4-216
               

               
Cow position:
               
chr17:8986373-8986591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
4-217
               

               
Cow position:
               
chr17:6005028-6004817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
69, 63
               

               
Conread position:
               
4-219
               

               
Cow position:
               
chr17:17035174-17034961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
88, 42
               

               
Conread position:
               
4-220
               

               
Cow position:
               
chr17:11224338-11224115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
55, 151
               

               
Conread position:
               
4-228
               

               
Cow position:
               
chr17:9935576-9935806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 110
               

               
Conread position:
               
4-256
               

               
Cow position:
               
chr17:20199125-20199361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
89, 64
               

               
Conread position:
               
4-275
               

               
Cow position:
               
chr17:26789643-26789378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 33
               

               
Conread position:
               
4-310
               

               
Cow position:
               
chr17:22128151-22127850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 53
               

               
Conread position:
               
4-351
               

               
Cow position:
               
chr17:37699113-37699472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 19
               

               
Conread position:
               
4-360
               

               
Cow position:
               
chr17:20884753-20884398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 19
               

               
Conread position:
               
4-364
               

               
Cow position:
               
chr17:10431736-10432102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 225
               

               
Conread position:
               
4-394
               

               
Cow position:
               
chr17:31701663-31701281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 209
               

               
Conread position:
               
4-422
               

               
Cow position:
               
chr17:1063396-1063005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
96, 25
               

               
Conread position:
               
4-426
               

               
Cow position:
               
chr17:1035366-1035789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 217
               

               
Conread position:
               
4-434
               

               
Cow position:
               
chr17:24773904-24773488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 67
               

               
Conread position:
               
4-448
               

               
Cow position:
               
chr17:11362404-11361973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 83
               

               
Conread position:
               
4-452
               

               
Cow position:
               
chr17:32471560-32472005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 63
               

               
Conread position:
               
4-508
               

               
Cow position:
               
chr17:5349895-5350392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 51
               

               
Conread position:
               
4-629
               

               
Cow position:
               
chr17:20780753-20780121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
647
               

               
Alignm identity:
               
467
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 230
               

               
Conread position:
               
5-162
               

               
Cow position:
               
chr17:28529082-28528922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
65, 8
               

               
Conread position:
               
5-186
               

               
Cow position:
               
chr17:44798714-44798894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
68, 95
               

               
Conread position:
               
5-193
               

               
Cow position:
               
chr17:21076000-21075809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
68, 86
               

               
Conread position:
               
5-281
               

               
Cow position:
               
chr17:5012068-5011801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 188
               

               
Conread position:
               
5-282
               

               
Cow position:
               
chr17:26802700-26802987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
59, 169
               

               
Conread position:
               
5-365
               

               
Cow position:
               
chr17:24928705-24928349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 217
               

               
Conread position:
               
5-426
               

               
Cow position:
               
chr17:12536247-12536656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 64
               

               
Conread position:
               
5-454
               

               
Cow position:
               
chr17:12325543-12325962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
88, 52
               

               
Conread position:
               
5-465
               

               
Cow position:
               
chr17:5422851-5423298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 61
               

               
Conread position:
               
5-478
               

               
Cow position:
               
chr17:29080764-29080326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 24
               

               
Conread position:
               
5-606
               

               
Cow position:
               
chr17:23100995-23101582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
612
               

               
Alignm identity:
               
448
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 48
               

               
Conread position:
               
5-616
               

               
Cow position:
               
chr17:21292811-21293435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
641
               

               
Alignm identity:
               
480
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 19
               

               
Conread position:
               
5-629
               

               
Cow position:
               
chr17:29292163-29292772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
646
               

               
Alignm identity:
               
472
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 63
               

               
Conread position:
               
6-165
               

               
Cow position:
               
chr17:18708391-18708545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
86, 52
               

               
Conread position:
               
6-171
               

               
Cow position:
               
chr17:20881589-20881749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
94, 17
               

               
Conread position:
               
6-174
               

               
Cow position:
               
chr17:8137628-8137462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
86, 62
               

               
Conread position:
               
6-216
               

               
Cow position:
               
chr17:24862681-24862473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
87, 67
               

               
Conread position:
               
6-219
               

               
Cow position:
               
chr17:29245660-29245455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
84, 52
               

               
Conread position:
               
6-276
               

               
Cow position:
               
chr17:950201-949932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
61, 21
               

               
Conread position:
               
6-289
               

               
Cow position:
               
chr17:30750274-30749976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
25, 20
               

               
Conread position:
               
6-410
               

               
Cow position:
               
chr17:18419911-18419501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 217
               

               
Conread position:
               
6-477
               

               
Cow position:
               
chr17:39771628-39771156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 214
               

               
Conread position:
               
7-251
               

               
Cow position:
               
chr17:45296631-45296397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
94, 19
               

               
Conread position:
               
7-264
               

               
Cow position:
               
chr17:12959327-12959073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
22, 62
               

               
Conread position:
               
7-581
               

               
Cow position:
               
chr17:41393466-41394059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
605
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 233
               

               
Conread position:
               
7-618
               

               
Cow position:
               
chr17:41399721-41400356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
648
               

               
Alignm identity:
               
438
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 234
               

               
Conread position:
               
7-629
               

               
Cow position:
               
chr17:20848749-20848138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
629
               

               
Alignm identity:
               
479
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 161
               

               
Conread position:
               
10-160
               

               
Cow position:
               
chr17:25095708-25095552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
10-180
               

               
Cow position:
               
chr17:7554045-7554209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
90, 62
               

               
Conread position:
               
10-222
               

               
Cow position:
               
chr17:40355483-40355267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
10-252
               

               
Cow position:
               
chr17:5012846-5013096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 157
               

               
Conread position:
               
10-348
               

               
Cow position:
               
chr17:11215011-11215342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 17
               

               
Conread position:
               
10-354
               

               
Cow position:
               
chr17:25594466-25594822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 65
               

               
Conread position:
               
10-381
               

               
Cow position:
               
chr17:1114120-1113738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 218
               

               
Conread position:
               
10-457
               

               
Cow position:
               
chr17:11280867-11281326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 180
               

               
Conread position:
               
11-179
               

               
Cow position:
               
chr17:25348588-25348420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
18, 5
               

               
Conread position:
               
13-154
               

               
Cow position:
               
chr17:17265911-17266058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
13-161
               

               
Cow position:
               
chr17:20847289-20847135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
13-177
               

               
Cow position:
               
chr17:17163871-17163703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
35, 79
               

               
Conread position:
               
13-187
               

               
Cow position:
               
chr17:30493938-30494118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
13-189
               

               
Cow position:
               
chr17:18775970-18776141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
77, 59
               

               
Conread position:
               
13-220
               

               
Cow position:
               
chr17:45135695-45135893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
80, 36
               

               
Conread position:
               
13-249
               

               
Cow position:
               
chr17:24168827-24168590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
59, 206
               

               
Conread position:
               
13-282
               

               
Cow position:
               
chr17:25126563-25126303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 39
               

               
Conread position:
               
13-343
               

               
Cow position:
               
chr17:18920150-18920458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
87, 132
               

               
Conread position:
               
13-343
               

               
Cow position:
               
chr17:40852187-40851875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
16, 56
               

               
Conread position:
               
13-473
               

               
Cow position:
               
chr17:16371477-16371015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 34
               

               
Conread position:
               
13-611
               

               
Cow position:
               
chr17:24752102-24752656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
607
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 93
               

               
Conread position:
               
13-627
               

               
Cow position:
               
chr17:15187850-15188468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
632
               

               
Alignm identity:
               
447
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 13
               

               
Conread position:
               
13-629
               

               
Cow position:
               
chr17:6566703-6566081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
637
               

               
Alignm identity:
               
477
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 94
               

               
Conread position:
               
13-629
               

               
Cow position:
               
chr17:14025688-14026299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
631
               

               
Alignm identity:
               
478
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 215
               

               
Conread position:
               
14-146
               

               
Cow position:
               
chr17:38483578-38483712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
86, 58
               

               
Conread position:
               
14-247
               

               
Cow position:
               
chr17:8823541-8823295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
14-263
               

               
Cow position:
               
chr17:24613443-24613191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
54, 219
               

               
Conread position:
               
15-147
               

               
Cow position:
               
chr17:20130061-20129935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
79, 44
               

               
Conread position:
               
15-213
               

               
Cow position:
               
chr17:43299067-43299269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
57, 118
               

               
Conread position:
               
15-222
               

               
Cow position:
               
chr17:41778677-41778468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
57, 205
               

               
Conread position:
               
15-271
               

               
Cow position:
               
chr17:29961871-29961616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
77, 53
               

               
Conread position:
               
15-275
               

               
Cow position:
               
chr17:16078190-16078444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
57, 94
               

               
Conread position:
               
15-281
               

               
Cow position:
               
chr17:37523163-37522896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
57, 206
               

               
Conread position:
               
15-385
               

               
Cow position:
               
chr17:6329329-6328961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 50
               

               
Conread position:
               
15-406
               

               
Cow position:
               
chr17:30359673-30359310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 58
               

               
Conread position:
               
15-507
               

               
Cow position:
               
chr17:18473380-18472912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 60
               

               
Conread position:
               
15-627
               

               
Cow position:
               
chr17:11036130-11035526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
627
               

               
Alignm identity:
               
445
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 67
               

               
Conread position:
               
15-629
               

               
Cow position:
               
chr17:19999334-19998738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
627
               

               
Alignm identity:
               
458
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 10
               

               
Conread position:
               
17-164
               

               
Cow position:
               
chr17:5048148-5047998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
55, 147
               

               
Conread position:
               
17-264
               

               
Cow position:
               
chr17:10023273-10023024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
54, 222
               

               
Conread position:
               
17-569
               

               
Cow position:
               
chr17:2810849-2810283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
425
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 32
               

               
Conread position:
               
17-593
               

               
Cow position:
               
chr17:25189505-25188921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
593
               

               
Alignm identity:
               
441
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 142
               

               
Conread position:
               
18-290
               

               
Cow position:
               
chr17:7590243-7590514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
41, 207
               

               
Conread position:
               
20-546
               

               
Cow position:
               
chr17:34078896-34079412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 201
               

               
Conread position:
               
21-221
               

               
Cow position:
               
chr17:25467196-25466996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
52, 151
               

               
Conread position:
               
21-414
               

               
Cow position:
               
chr17:24149398-24149001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 198
               

               
Conread position:
               
22-213
               

               
Cow position:
               
chr17:26459522-26459320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
22-435
               

               
Cow position:
               
chr17:24490754-24490323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
23-220
               

               
Cow position:
               
chr17:40276950-40276751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
78, 50
               

               
Conread position:
               
23-402
               

               
Cow position:
               
chr17:4105778-4106150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
42, 188
               

               
Conread position:
               
23-402
               

               
Cow position:
               
chr17:4121513-4121886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
38, 64
               

               
Conread position:
               
24-187
               

               
Cow position:
               
chr17:3320350-3320192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
48, 76
               

               
Conread position:
               
24-222
               

               
Cow position:
               
chr17:4607451-4607238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
39, 176
               

               
Conread position:
               
24-523
               

               
Cow position:
               
chr17:4611852-4612362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 260
               

               
Conread position:
               
24-580
               

               
Cow position:
               
chr17:42419918-42419389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 48
               

               
Conread position:
               
24-629
               

               
Cow position:
               
chr17:5768107-5767503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
633
               

               
Alignm identity:
               
446
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 35
               

               
Conread position:
               
24-629
               

               
Cow position:
               
chr17:21870514-21871134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
630
               

               
Alignm identity:
               
440
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 199
               

               
Conread position:
               
28-159
               

               
Cow position:
               
chr17:1282052-1282186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
13, 45
               

               
Conread position:
               
29-220
               

               
Cow position:
               
chr17:18766781-18766986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
30-165
               

               
Cow position:
               
chr17:31985738-31985877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
70, 42
               

               
Conread position:
               
30-217
               

               
Cow position:
               
chr17:31991141-31990947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
30-454
               

               
Cow position:
               
chr17:25097655-25097247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 31
               

               
Conread position:
               
30-464
               

               
Cow position:
               
chr17:12219744-12220164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 39
               

               
Conread position:
               
30-564
               

               
Cow position:
               
chr17:24077598-24077073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 25
               

               
Conread position:
               
30-629
               

               
Cow position:
               
chr17:30665474-30664877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
611
               

               
Alignm identity:
               
479
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 73
               

               
Conread position:
               
31-246
               

               
Cow position:
               
chr17:3067654-3067869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
14, 190
               

               
Conread position:
               
32-336
               

               
Cow position:
               
chr17:14652576-14652881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 189
               

               
Conread position:
               
32-489
               

               
Cow position:
               
chr17:18108886-18109340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 39
               

               
Conread position:
               
36-186
               

               
Cow position:
               
chr17:8723234-8723389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
36-215
               

               
Cow position:
               
chr17:26120046-26119858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
37, 94
               

               
Conread position:
               
36-578
               

               
Cow position:
               
chr17:32457369-32457927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 57
               

               
Conread position:
               
37-221
               

               
Cow position:
               
chr17:37129408-37129209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
37-224
               

               
Cow position:
               
chr17:30169036-30169229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
47, 36
               

               
Conread position:
               
37-465
               

               
Cow position:
               
chr17:7698249-7697829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 112
               

               
Conread position:
               
37-482
               

               
Cow position:
               
chr17:18495324-18495754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 36
               

               
Conread position:
               
37-623
               

               
Cow position:
               
chr17:1492951-1493548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
605
               

               
Alignm identity:
               
477
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 184
               

               
Conread position:
               
39-325
               

               
Cow position:
               
chr17:21489432-21489714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 36
               

               
Conread position:
               
39-627
               

               
Cow position:
               
chr17:45882097-45881510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
599
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 129
               

               
Conread position:
               
43-185
               

               
Cow position:
               
chr17:4685752-4685605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
43-448
               

               
Cow position:
               
chr17:20932522-20932126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 186
               

               
Conread position:
               
46-192
               

               
Cow position:
               
chr17:10803064-10802920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
27, 13
               

               
Conread position:
               
47-235
               

               
Cow position:
               
chr17:25930352-25930542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
26, 175
               

               
Conread position:
               
48-465
               

               
Cow position:
               
chr17:9746697-9746294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 9
               

               
Conread position:
               
48-629
               

               
Cow position:
               
chr17:20083336-20083910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
596
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 6
               

               
Conread position:
               
49-359
               

               
Cow position:
               
chr17:6848981-6848681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 112
               

               
Conread position:
               
49-629
               

               
Cow position:
               
chr17:1410053-1410642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
598
               

               
Alignm identity:
               
433
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 26
               

               
Conread position:
               
50-369
               

               
Cow position:
               
chr17:33410825-33411156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 170
               

               
Conread position:
               
53-218
               

               
Cow position:
               
chr17:12342302-12342468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
48, 23
               

               
Conread position:
               
53-323
               

               
Cow position:
               
chr17:15376772-15376521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 72
               

               
Conread position:
               
53-517
               

               
Cow position:
               
chr17:19891805-19891332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 18
               

               
Conread position:
               
53-559
               

               
Cow position:
               
chr17:1060867-1061384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 20
               

               
Conread position:
               
53-613
               

               
Cow position:
               
chr17:17060503-17061052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 20
               

               
Conread position:
               
53-628
               

               
Cow position:
               
chr17:8690271-8690855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
608
               

               
Alignm identity:
               
438
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 20
               

               
Conread position:
               
54-330
               

               
Cow position:
               
chr17:23516762-23517037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
19, 177
               

               
Conread position:
               
54-466
               

               
Cow position:
               
chr17:39012898-39012490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 17
               

               
Conread position:
               
55-580
               

               
Cow position:
               
chr17:5255187-5255722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 172
               

               
Conread position:
               
57-456
               

               
Cow position:
               
chr17:2662601-2662191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 170
               

               
Conread position:
               
58-197
               

               
Cow position:
               
chr17:1875871-1876009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
35, 14
               

               
Conread position:
               
58-312
               

               
Cow position:
               
chr17:22056853-22057101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
43, 15
               

               
Conread position:
               
58-324
               

               
Cow position:
               
chr17:13638798-13638545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
42, 15
               

               
Conread position:
               
58-325
               

               
Cow position:
               
chr17:21922456-21922712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 169
               

               
Conread position:
               
58-325
               

               
Cow position:
               
chr17:37430330-37430602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
44, 18
               

               
Conread position:
               
58-330
               

               
Cow position:
               
chr17:27202871-27203139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 35
               

               
Conread position:
               
58-352
               

               
Cow position:
               
chr17:20874572-20874273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 28
               

               
Conread position:
               
58-355
               

               
Cow position:
               
chr17:39715332-39715037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
7, 65
               

               
Conread position:
               
58-359
               

               
Cow position:
               
chr17:7137164-7136858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
14, 196
               

               
Conread position:
               
58-378
               

               
Cow position:
               
chr17:15340579-15340895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
42, 14
               

               
Conread position:
               
58-466
               

               
Cow position:
               
chr17:23246375-23245983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 15
               

               
Conread position:
               
58-496
               

               
Cow position:
               
chr17:8079489-8079056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 162
               

               
Conread position:
               
58-545
               

               
Cow position:
               
chr17:9117821-9117335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 32
               

               
Conread position:
               
59-211
               

               
Cow position:
               
chr17:5720045-5719891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
42, 14
               

               
Conread position:
               
59-281
               

               
Cow position:
               
chr17:9487468-9487254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
41, 144
               

               
Conread position:
               
59-397
               

               
Cow position:
               
chr17:31585591-31585267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
56, 14
               

               
Conread position:
               
59-518
               

               
Cow position:
               
chr17:25796161-25796623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 163
               

               
Conread position:
               
59-629
               

               
Cow position:
               
chr17:38833217-38832656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
584
               

               
Alignm identity:
               
435
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 14
               

               
Conread position:
               
60-292
               

               
Cow position:
               
chr17:22016916-22017147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
48, 15
               

               
Conread position:
               
60-309
               

               
Cow position:
               
chr17:23883097-23883332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
13, 9
               

               
Conread position:
               
60-434
               

               
Cow position:
               
chr17:9911928-9911566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 13
               

               
Conread position:
               
60-629
               

               
Cow position:
               
chr17:3042645-3042091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
584
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 10
               

               
Conread position:
               
61-618
               

               
Cow position:
               
chr17:21335519-21336084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
441
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 25
               

               
Conread position:
               
63-282
               

               
Cow position:
               
chr17:13715864-13716087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
24, 7
               

               
Conread position:
               
63-347
               

               
Cow position:
               
chr17:38990276-38989993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
49, 10
               

               
Conread position:
               
64-209
               

               
Cow position:
               
chr17:8108188-8108332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
37, 96
               

               
Conread position:
               
64-299
               

               
Cow position:
               
chr17:4683516-4683281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
48, 9
               

               
Conread position:
               
64-323
               

               
Cow position:
               
chr17:2275639-2275386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 9
               

               
Conread position:
               
64-507
               

               
Cow position:
               
chr17:8544476-8544033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 38
               

               
Conread position:
               
65-497
               

               
Cow position:
               
chr17:20126765-20126359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 16
               

               
Conread position:
               
65-629
               

               
Cow position:
               
chr17:20234379-20233829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 8
               

               
Conread position:
               
67-464
               

               
Cow position:
               
chr17:38200595-38200992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 154
               

               
Conread position:
               
67-465
               

               
Cow position:
               
chr17:35126873-35126487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
6, 66
               

               
Conread position:
               
67-585
               

               
Cow position:
               
chr17:40288835-40289354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 6
               

               
Conread position:
               
67-629
               

               
Cow position:
               
chr17:979002-979532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 34
               

               
Conread position:
               
71-577
               

               
Cow position:
               
chr17:23803619-23803120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 46
               

               
Conread position:
               
72-470
               

               
Cow position:
               
chr17:27048317-27047931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 75
               

               
Conread position:
               
72-537
               

               
Cow position:
               
chr17:30718256-30718721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 177
               

               
Conread position:
               
72-628
               

               
Cow position:
               
chr17:5900531-5899983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 188
               

               
Conread position:
               
73-352
               

               
Cow position:
               
chr17:39857546-39857276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
73-559
               

               
Cow position:
               
chr17:21680940-21680440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 86
               

               
Conread position:
               
74-422
               

               
Cow position:
               
chr17:37479842-37480177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 100
               

               
Conread position:
               
75-210
               

               
Cow position:
               
chr17:41666300-41666162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
75-462
               

               
Cow position:
               
chr17:37481912-37482312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 42
               

               
Conread position:
               
75-581
               

               
Cow position:
               
chr17:24580136-24580632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 57
               

               
Conread position:
               
76-251
               

               
Cow position:
               
chr17:34836329-34836152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
20, 145
               

               
Conread position:
               
76-290
               

               
Cow position:
               
chr17:16158647-16158434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
18, 10
               

               
Conread position:
               
76-618
               

               
Cow position:
               
chr17:21495529-21494990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 100
               

               
Conread position:
               
77-350
               

               
Cow position:
               
chr17:25502267-25501995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
24, 79
               

               
Conread position:
               
77-629
               

               
Cow position:
               
chr17:41030094-41029548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 82
               

               
Conread position:
               
78-268
               

               
Cow position:
               
chr17:28814337-28814534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
78-340
               

               
Cow position:
               
chr17:21757985-21758251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
23, 143
               

               
Conread position:
               
78-474
               

               
Cow position:
               
chr17:14848392-14848758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 14
               

               
Conread position:
               
78-623
               

               
Cow position:
               
chr17:34596094-34595546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 136
               

               
Conread position:
               
80-277
               

               
Cow position:
               
chr17:20810336-20810533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
21, 26
               

               
Conread position:
               
80-278
               

               
Cow position:
               
chr17:10886257-10886451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
26, 102
               

               
Conread position:
               
80-338
               

               
Cow position:
               
chr17:10561788-10561527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
17, 128
               

               
Conread position:
               
80-413
               

               
Cow position:
               
chr17:12591328-12590988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 238
               

               
Conread position:
               
80-455
               

               
Cow position:
               
chr17:11156340-11156710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 75
               

               
Conread position:
               
80-462
               

               
Cow position:
               
chr17:21755280-21755665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 80
               

               
Conread position:
               
80-481
               

               
Cow position:
               
chr17:8279557-8279950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 27
               

               
Conread position:
               
80-627
               

               
Cow position:
               
chr17:35387847-35388416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 130
               

               
Conread position:
               
80-629
               

               
Cow position:
               
chr17:4213896-4213359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 141
               

               
Conread position:
               
81-219
               

               
Cow position:
               
chr17:4833376-4833516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
81-220
               

               
Cow position:
               
chr17:34835955-34836097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
81-223
               

               
Cow position:
               
chr17:44086803-44086667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
81-452
               

               
Cow position:
               
chr17:41891909-41892287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 227
               

               
Conread position:
               
82-310
               

               
Cow position:
               
chr17:38263338-38263564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
19, 174
               

               
Conread position:
               
82-349
               

               
Cow position:
               
chr17:23798430-23798168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 10
               

               
Conread position:
               
82-483
               

               
Cow position:
               
chr17:29363208-29363609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
17, 209
               

               
Conread position:
               
83-280
               

               
Cow position:
               
chr17:26730460-26730656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
13, 137
               

               
Conread position:
               
83-506
               

               
Cow position:
               
chr17:7760322-7760744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 77
               

               
Conread position:
               
83-602
               

               
Cow position:
               
chr17:9565451-9564941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 76
               

               
Conread position:
               
83-629
               

               
Cow position:
               
chr17:30539119-30539647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 36
               

               
Conread position:
               
84-221
               

               
Cow position:
               
chr17:12288944-12288804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
84-355
               

               
Cow position:
               
chr17:33657919-33658190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
17, 219
               

               
Conread position:
               
89-218
               

               
Cow position:
               
chr17:1350594-1350463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
89-446
               

               
Cow position:
               
chr17:5006343-5006700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 73
               

               
Conread position:
               
92-532
               

               
Cow position:
               
chr17:5224541-5224103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 88
               

               
Conread position:
               
95-440
               

               
Cow position:
               
chr17:21628615-21628279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 84
               

               
Conread position:
               
97-465
               

               
Cow position:
               
chr17:27819428-27819075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
30, 15
               

               
Conread position:
               
98-235
               

               
Cow position:
               
chr17:25169212-25169075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
16, 121
               

               
Conread position:
               
99-256
               

               
Cow position:
               
chr17:7577731-7577568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
16, 160
               

               
Conread position:
               
100-254
               

               
Cow position:
               
chr17:7851220-7851066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
15, 125
               

               
Conread position:
               
100-293
               

               
Cow position:
               
chr17:36094136-36093943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
12, 79
               

               
Conread position:
               
100-456
               

               
Cow position:
               
chr17:20869970-20870311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
11, 25
               

               
Conread position:
               
101-396
               

               
Cow position:
               
chr17:10020660-10020957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 148
               

               
Conread position:
               
101-418
               

               
Cow position:
               
chr17:31230991-31231294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 47
               

               
Conread position:
               
102-577
               

               
Cow position:
               
chr17:20081668-20082128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 29
               

               
Conread position:
               
104-365
               

               
Cow position:
               
chr17:14060647-14060906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
104-464
               

               
Cow position:
               
chr17:20216292-20215946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
90, 10
               

               
Conread position:
               
105-627
               

               
Cow position:
               
chr17:3782171-3781639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 52
               

               
Conread position:
               
108-477
               

               
Cow position:
               
chr17:33998927-33999283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
62, 13
               

               
Conread position:
               
109-296
               

               
Cow position:
               
chr17:4891241-4891424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
182, 102
               

               
Conread position:
               
109-538
               

               
Cow position:
               
chr17:17121793-17121370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
321, 109
               

               
Conread position:
               
110-263
               

               
Cow position:
               
chr17:32265369-32265516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
110-286
               

               
Cow position:
               
chr17:11368729-11368904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
110-525
               

               
Cow position:
               
chr17:552849-553252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
222, 81
               

               
Conread position:
               
111-412
               

               
Cow position:
               
chr17:18824906-18824616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
83, 25
               

               
Conread position:
               
113-289
               

               
Cow position:
               
chr17:22246107-22245936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
113-399
               

               
Cow position:
               
chr17:14762004-14762280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
254, 105
               

               
Conread position:
               
113-447
               

               
Cow position:
               
chr17:38647179-38646859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 141
               

               
Conread position:
               
113-629
               

               
Cow position:
               
chr17:32651733-32651219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 35
               

               
Conread position:
               
114-629
               

               
Cow position:
               
chr17:28540145-28539642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 43
               

               
Conread position:
               
116-255
               

               
Cow position:
               
chr17:7567279-7567416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
116-450
               

               
Cow position:
               
chr17:1275638-1275307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
260, 40
               

               
Conread position:
               
117-291
               

               
Cow position:
               
chr17:3872652-3872481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
108, 25
               

               
Conread position:
               
117-406
               

               
Cow position:
               
chr17:21917759-21918042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
190, 69
               

               
Conread position:
               
117-627
               

               
Cow position:
               
chr17:14265460-14265949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
258, 40
               

               
Conread position:
               
123-629
               

               
Cow position:
               
chr17:139770-139268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 26
               

               
Conread position:
               
126-629
               

               
Cow position:
               
chr17:28359947-28359429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 86
               

               
Conread position:
               
130-351
               

               
Cow position:
               
chr17:7654351-7654568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
91, 176
               

               
Conread position:
               
131-397
               

               
Cow position:
               
chr17:27549729-27549987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
74, 7
               

               
Conread position:
               
133-627
               

               
Cow position:
               
chr17:34316619-34317113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 23
               

               
Conread position:
               
137-435
               

               
Cow position:
               
chr17:7648306-7648024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
130, 69
               

               
Conread position:
               
137-625
               

               
Cow position:
               
chr17:2034623-2034151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
281, 85
               

               
Conread position:
               
138-330
               

               
Cow position:
               
chr17:41411736-41411922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
138-530
               

               
Cow position:
               
chr17:5688268-5688645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
300, 78
               

               
Conread position:
               
140-251
               

               
Cow position:
               
chr17:25485615-25485725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
140-336
               

               
Cow position:
               
chr17:7600508-7600700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
84, 77
               

               
Conread position:
               
143-615
               

               
Cow position:
               
chr17:5733379-5733816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 71
               

               
Conread position:
               
144-360
               

               
Cow position:
               
chr17:27565208-27564997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
145-456
               

               
Cow position:
               
chr17:6624339-6624034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
229, 11
               

               
Conread position:
               
145-627
               

               
Cow position:
               
chr17:12059007-12059488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
297, 27
               

               
Conread position:
               
146-414
               

               
Cow position:
               
chr17:38362898-38363147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 73
               

               
Conread position:
               
149-629
               

               
Cow position:
               
chr17:15333628-15334119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
227, 161
               

               
Conread position:
               
152-473
               

               
Cow position:
               
chr17:20839487-20839793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
223, 61
               

               
Conread position:
               
154-487
               

               
Cow position:
               
chr17:5381035-5380717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
134, 42
               

               
Conread position:
               
157-308
               

               
Cow position:
               
chr17:27770355-27770208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
157-317
               

               
Cow position:
               
chr17:21152430-21152272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
148, 58
               

               
Conread position:
               
157-339
               

               
Cow position:
               
chr17:17266817-17266998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
154, 0
               

               
Conread position:
               
157-425
               

               
Cow position:
               
chr17:267511-267778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
157, 65
               

               
Conread position:
               
158-346
               

               
Cow position:
               
chr17:1311423-1311237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
104, 59
               

               
Conread position:
               
158-433
               

               
Cow position:
               
chr17:44232639-44232915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
218, 153
               

               
Conread position:
               
158-561
               

               
Cow position:
               
chr17:26183301-26182892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 186
               

               
Conread position:
               
161-360
               

               
Cow position:
               
chr17:21910851-21911045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
161-454
               

               
Cow position:
               
chr17:18246151-18245859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
56, 126
               

               
Conread position:
               
161-506
               

               
Cow position:
               
chr17:42435572-42435910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
210, 91
               

               
Conread position:
               
162-386
               

               
Cow position:
               
chr17:34834144-34834368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
12, 65
               

               
Conread position:
               
162-430
               

               
Cow position:
               
chr17:32950344-32950081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
214, 39
               

               
Conread position:
               
162-440
               

               
Cow position:
               
chr17:20912957-20912695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
65, 55
               

               
Conread position:
               
162-464
               

               
Cow position:
               
chr17:24761159-24761449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 56
               

               
Conread position:
               
162-629
               

               
Cow position:
               
chr17:24550246-24549771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 55
               

               
Conread position:
               
163-400
               

               
Cow position:
               
chr17:21298300-21298062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
99, 38
               

               
Conread position:
               
163-404
               

               
Cow position:
               
chr17:10510589-10510828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
213, 59
               

               
Conread position:
               
163-532
               

               
Cow position:
               
chr17:1081061-1080703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 55
               

               
Conread position:
               
163-627
               

               
Cow position:
               
chr17:10649897-10649453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
274, 42
               

               
Conread position:
               
163-629
               

               
Cow position:
               
chr17:3471487-3471033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
257, 60
               

               
Conread position:
               
164-393
               

               
Cow position:
               
chr17:1353464-1353241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
212, 54
               

               
Conread position:
               
164-406
               

               
Cow position:
               
chr17:10491593-10491357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
211, 60
               

               
Conread position:
               
165-456
               

               
Cow position:
               
chr17:21323342-21323082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
140, 46
               

               
Conread position:
               
165-462
               

               
Cow position:
               
chr17:15133211-15132942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
165-629
               

               
Cow position:
               
chr17:27306226-27305767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
211, 58
               

               
Conread position:
               
166-418
               

               
Cow position:
               
chr17:34207750-34208000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
63, 145
               

               
Conread position:
               
167-448
               

               
Cow position:
               
chr17:27765336-27765071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
58, 7
               

               
Conread position:
               
168-263
               

               
Cow position:
               
chr17:21272439-21272535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
97
               

               
Alignm identity:
               
83
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
169-627
               

               
Cow position:
               
chr17:13143626-13144078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 136
               

               
Conread position:
               
170-359
               

               
Cow position:
               
chr17:27647285-27647474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
100, 77
               

               
Conread position:
               
171-426
               

               
Cow position:
               
chr17:26881271-26881525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 132
               

               
Conread position:
               
172-447
               

               
Cow position:
               
chr17:2839968-2839681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
161, 61
               

               
Conread position:
               
172-455
               

               
Cow position:
               
chr17:33926064-33926338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
52, 93
               

               
Conread position:
               
174-342
               

               
Cow position:
               
chr17:20306107-20305941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
174-350
               

               
Cow position:
               
chr17:25122351-25122523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
107, 41
               

               
Conread position:
               
174-375
               

               
Cow position:
               
chr17:11921217-11921418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
53, 142
               

               
Conread position:
               
174-389
               

               
Cow position:
               
chr17:5381937-5382137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
202, 44
               

               
Conread position:
               
174-413
               

               
Cow position:
               
chr17:36268438-36268221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
201, 44
               

               
Conread position:
               
174-434
               

               
Cow position:
               
chr17:21697788-21697536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
200, 11
               

               
Conread position:
               
174-483
               

               
Cow position:
               
chr17:21031844-21031540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 126
               

               
Conread position:
               
174-543
               

               
Cow position:
               
chr17:1295514-1295883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
242, 43
               

               
Conread position:
               
174-550
               

               
Cow position:
               
chr17:242695-242321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 41
               

               
Conread position:
               
176-496
               

               
Cow position:
               
chr17:42347169-42347482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
200, 70
               

               
Conread position:
               
176-629
               

               
Cow position:
               
chr17:11056314-11056774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 21
               

               
Conread position:
               
177-326
               

               
Cow position:
               
chr17:26884686-26884535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
45, 83
               

               
Conread position:
               
177-464
               

               
Cow position:
               
chr17:33402882-33403166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
196, 46
               

               
Conread position:
               
177-618
               

               
Cow position:
               
chr17:5246948-5246492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 76
               

               
Conread position:
               
179-414
               

               
Cow position:
               
chr17:32221115-32221338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
124, 36
               

               
Conread position:
               
179-629
               

               
Cow position:
               
chr17:5895857-5896310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 39
               

               
Conread position:
               
181-530
               

               
Cow position:
               
chr17:21312759-21313113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 45
               

               
Conread position:
               
183-422
               

               
Cow position:
               
chr17:35311475-35311237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 33
               

               
Conread position:
               
183-448
               

               
Cow position:
               
chr17:966698-966949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
193, 35
               

               
Conread position:
               
183-557
               

               
Cow position:
               
chr17:10473882-10473510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 119
               

               
Conread position:
               
183-627
               

               
Cow position:
               
chr17:3387321-3386901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 35
               

               
Conread position:
               
185-343
               

               
Cow position:
               
chr17:1505359-1505202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
152, 77
               

               
Conread position:
               
186-618
               

               
Cow position:
               
chr17:3138549-3138966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 31
               

               
Conread position:
               
187-473
               

               
Cow position:
               
chr17:4721538-4721252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 101
               

               
Conread position:
               
188-378
               

               
Cow position:
               
chr17:14883039-14883228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
164, 36
               

               
Conread position:
               
189-389
               

               
Cow position:
               
chr17:10222340-10222534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
9, 30
               

               
Conread position:
               
189-445
               

               
Cow position:
               
chr17:15067583-15067830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
85, 74
               

               
Conread position:
               
194-390
               

               
Cow position:
               
chr17:484635-484451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
34, 19
               

               
Conread position:
               
194-455
               

               
Cow position:
               
chr17:4472778-4473020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
24, 16
               

               
Conread position:
               
197-396
               

               
Cow position:
               
chr17:20928946-20928752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
176, 17
               

               
Conread position:
               
200-396
               

               
Cow position:
               
chr17:40792251-40792065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
176, 26
               

               
Conread position:
               
203-399
               

               
Cow position:
               
chr17:38613283-38613085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
14, 114
               

               
Conread position:
               
204-346
               

               
Cow position:
               
chr17:24910006-24909867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
19, 55
               

               
Conread position:
               
212-627
               

               
Cow position:
               
chr17:21874283-21874713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 237
               

               
Conread position:
               
213-464
               

               
Cow position:
               
chr17:5745232-5745469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
14, 41
               

               
Conread position:
               
216-629
               

               
Cow position:
               
chr17:25740972-25740546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 72
               

               
Conread position:
               
218-627
               

               
Cow position:
               
chr17:18494500-18494922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 68
               

               
Conread position:
               
219-462
               

               
Cow position:
               
chr17:22781705-22781468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 7
               

               
Conread position:
               
223-344
               

               
Cow position:
               
chr17:9936029-9936146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
226-578
               

               
Cow position:
               
chr17:3843487-3843147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 70
               

               
Conread position:
               
226-626
               

               
Cow position:
               
chr17:5041674-5042082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 72
               

               
Conread position:
               
226-629
               

               
Cow position:
               
chr17:23337009-23337412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
198, 84
               

               
Conread position:
               
227-548
               

               
Cow position:
               
chr17:4606963-4606656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
244, 19
               

               
Conread position:
               
228-465
               

               
Cow position:
               
chr17:4824501-4824274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
228-466
               

               
Cow position:
               
chr17:21017802-21017566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
148, 70
               

               
Conread position:
               
228-552
               

               
Cow position:
               
chr17:3306872-3306549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 40
               

               
Conread position:
               
228-569
               

               
Cow position:
               
chr17:19455306-19455632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
131, 58
               

               
Conread position:
               
229-628
               

               
Cow position:
               
chr17:20592235-20591817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
54, 48
               

               
Conread position:
               
239-426
               

               
Cow position:
               
chr17:37857729-37857922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
70, 109
               

               
Conread position:
               
241-490
               

               
Cow position:
               
chr17:20835589-20835340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
135, 63
               

               
Conread position:
               
241-513
               

               
Cow position:
               
chr17:14244167-14243889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
134, 62
               

               
Conread position:
               
241-587
               

               
Cow position:
               
chr17:3518260-3518595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 87
               

               
Conread position:
               
250-450
               

               
Cow position:
               
chr17:21710489-21710293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
170, 54
               

               
Conread position:
               
253-627
               

               
Cow position:
               
chr17:3498682-3499066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 83
               

               
Conread position:
               
261-455
               

               
Cow position:
               
chr17:3182612-3182801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
115, 49
               

               
Conread position:
               
268-628
               

               
Cow position:
               
chr17:43527943-43527584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 35
               

               
Conread position:
               
269-472
               

               
Cow position:
               
chr17:26627674-26627877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
106, 42
               

               
Conread position:
               
271-629
               

               
Cow position:
               
chr17:16117460-16117829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 40
               
Show alignments to all cow chromosomes.