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Cow genome map

           
Conread name:
           
rnca33b_d16.y1
        

               
Conread position:
               
1-121
               

               
Cow position:
               
chr25:12092807-12092681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
1-121
               

               
Cow position:
               
chr25:37648970-37648848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
92, 70
               

               
Conread position:
               
1-127
               

               
Cow position:
               
chr25:7864519-7864394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
109, 72
               

               
Conread position:
               
1-134
               

               
Cow position:
               
chr25:22642461-22642318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
1-137
               

               
Cow position:
               
chr25:28939952-28940090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
95, 72
               

               
Conread position:
               
1-145
               

               
Cow position:
               
chr25:13565146-13565280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
68, 75
               

               
Conread position:
               
1-146
               

               
Cow position:
               
chr25:21082218-21082365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
92, 71
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr25:33272826-33272674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
1-152
               

               
Cow position:
               
chr25:8410845-8410998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
75, 54
               

               
Conread position:
               
1-153
               

               
Cow position:
               
chr25:9494897-9494740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
1-154
               

               
Cow position:
               
chr25:447719-447869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
95, 9
               

               
Conread position:
               
1-154
               

               
Cow position:
               
chr25:4157059-4157212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
92, 72
               

               
Conread position:
               
1-154
               

               
Cow position:
               
chr25:15999362-15999518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
59, 72
               

               
Conread position:
               
1-157
               

               
Cow position:
               
chr25:26643000-26642839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
68, 146
               

               
Conread position:
               
1-158
               

               
Cow position:
               
chr25:14210164-14210013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
99, 58
               

               
Conread position:
               
1-159
               

               
Cow position:
               
chr25:27825292-27825130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
1-163
               

               
Cow position:
               
chr25:7185085-7185250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
72, 159
               

               
Conread position:
               
1-164
               

               
Cow position:
               
chr25:32750264-32750099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
72, 18
               

               
Conread position:
               
1-166
               

               
Cow position:
               
chr25:18934448-18934613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
93, 72
               

               
Conread position:
               
1-167
               

               
Cow position:
               
chr25:14212750-14212919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
22, 114
               

               
Conread position:
               
1-169
               

               
Cow position:
               
chr25:14457340-14457168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
1-171
               

               
Cow position:
               
chr25:9640846-9641019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
70, 164
               

               
Conread position:
               
1-173
               

               
Cow position:
               
chr25:5791525-5791702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
1-173
               

               
Cow position:
               
chr25:7005703-7005527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
1-173
               

               
Cow position:
               
chr25:7311206-7311380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
72, 5
               

               
Conread position:
               
1-173
               

               
Cow position:
               
chr25:15447680-15447511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
88, 9
               

               
Conread position:
               
1-173
               

               
Cow position:
               
chr25:37965451-37965272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
71, 88
               

               
Conread position:
               
1-174
               

               
Cow position:
               
chr25:22734194-22734022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
99, 58
               

               
Conread position:
               
1-174
               

               
Cow position:
               
chr25:24115127-24115302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
99, 71
               

               
Conread position:
               
1-175
               

               
Cow position:
               
chr25:11857798-11857974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
91, 67
               

               
Conread position:
               
1-179
               

               
Cow position:
               
chr25:15349721-15349896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
99, 72
               

               
Conread position:
               
1-179
               

               
Cow position:
               
chr25:21287347-21287517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
40, 23
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr25:26100881-26100702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
89, 22
               

               
Conread position:
               
1-181
               

               
Cow position:
               
chr25:17138064-17137879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
61, 25
               

               
Conread position:
               
1-182
               

               
Cow position:
               
chr25:14102857-14102672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
1-183
               

               
Cow position:
               
chr25:26269526-26269713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr25:2662582-2662402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
99, 72
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr25:18551145-18551331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
72, 80
               

               
Conread position:
               
1-187
               

               
Cow position:
               
chr25:26061536-26061730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
1-187
               

               
Cow position:
               
chr25:26989389-26989200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
63, 164
               

               
Conread position:
               
1-187
               

               
Cow position:
               
chr25:36370009-36369820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
72, 128
               

               
Conread position:
               
1-187
               

               
Cow position:
               
chr25:36375700-36375511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
72, 128
               

               
Conread position:
               
1-188
               

               
Cow position:
               
chr25:15423433-15423625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
1-190
               

               
Cow position:
               
chr25:33100760-33100574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
92, 58
               

               
Conread position:
               
1-192
               

               
Cow position:
               
chr25:14164386-14164196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
71, 157
               

               
Conread position:
               
1-192
               

               
Cow position:
               
chr25:31657092-31657281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
99, 71
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr25:13826619-13826426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
109, 72
               

               
Conread position:
               
1-198
               

               
Cow position:
               
chr25:20203096-20202903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
109, 67
               

               
Conread position:
               
1-201
               

               
Cow position:
               
chr25:9573947-9574143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
92, 67
               

               
Conread position:
               
1-202
               

               
Cow position:
               
chr25:12195032-12195241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
68, 119
               

               
Conread position:
               
1-203
               

               
Cow position:
               
chr25:2111224-2111034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
1-203
               

               
Cow position:
               
chr25:8863199-8863407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
1-208
               

               
Cow position:
               
chr25:20085766-20085551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr25:5808136-5807920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr25:14225555-14225339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr25:23519849-23520051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
89, 26
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chr25:20487247-20487469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr25:28423336-28423117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
72, 151
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr25:35339002-35339216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
99, 69
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr25:33776248-33776039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
32, 76
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr25:40682925-40682711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
93, 67
               

               
Conread position:
               
1-216
               

               
Cow position:
               
chr25:13823531-13823747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
85, 67
               

               
Conread position:
               
1-219
               

               
Cow position:
               
chr25:18760523-18760739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
90, 67
               

               
Conread position:
               
1-220
               

               
Cow position:
               
chr25:13223085-13222868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
99, 6
               

               
Conread position:
               
1-220
               

               
Cow position:
               
chr25:19584557-19584332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
74, 103
               

               
Conread position:
               
1-220
               

               
Cow position:
               
chr25:22298820-22298605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
99, 72
               

               
Conread position:
               
1-220
               

               
Cow position:
               
chr25:33311135-33311359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
1-221
               

               
Cow position:
               
chr25:9616026-9615804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
101, 72
               

               
Conread position:
               
1-221
               

               
Cow position:
               
chr25:9939069-9939289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
58, 73
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr25:14111209-14110984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr25:17919165-17918940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 38
               

               
Conread position:
               
1-225
               

               
Cow position:
               
chr25:12206728-12206500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr25:21317230-21317468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
1-229
               

               
Cow position:
               
chr25:19069644-19069872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
72, 26
               

               
Conread position:
               
1-230
               

               
Cow position:
               
chr25:9769607-9769374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
1-231
               

               
Cow position:
               
chr25:27622304-27622076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
68, 106
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chr25:22348270-22348508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
1-234
               

               
Cow position:
               
chr25:9025311-9025081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
57, 72
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr25:22848853-22849104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
72, 222
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr25:36717100-36716868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
100, 26
               

               
Conread position:
               
1-242
               

               
Cow position:
               
chr25:17403664-17403432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
99, 67
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr25:7726853-7726611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 221
               

               
Conread position:
               
1-247
               

               
Cow position:
               
chr25:21500854-21501109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
71, 51
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr25:19850053-19849796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
71, 22
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr25:21184074-21183822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
1-252
               

               
Cow position:
               
chr25:11038551-11038282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
1-270
               

               
Cow position:
               
chr25:35762776-35762511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
99, 71
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chr25:35052430-35052705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 223
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr25:13621174-13621445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
100, 60
               

               
Conread position:
               
1-289
               

               
Cow position:
               
chr25:6928328-6928607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
30, 68
               

               
Conread position:
               
1-294
               

               
Cow position:
               
chr25:28987050-28986761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
72, 142
               

               
Conread position:
               
1-294
               

               
Cow position:
               
chr25:36555511-36555793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
100, 41
               

               
Conread position:
               
1-307
               

               
Cow position:
               
chr25:7817173-7816867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
72, 12
               

               
Conread position:
               
1-312
               

               
Cow position:
               
chr25:19363872-19364183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 58
               

               
Conread position:
               
1-318
               

               
Cow position:
               
chr25:7010782-7011099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
71, 242
               

               
Conread position:
               
1-319
               

               
Cow position:
               
chr25:6292757-6292440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
72, 220
               

               
Conread position:
               
1-320
               

               
Cow position:
               
chr25:17119932-17119613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 176
               

               
Conread position:
               
1-321
               

               
Cow position:
               
chr25:4245853-4245561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
99, 71
               

               
Conread position:
               
1-323
               

               
Cow position:
               
chr25:12509833-12510140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
99, 58
               

               
Conread position:
               
1-329
               

               
Cow position:
               
chr25:24202821-24203129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
69, 80
               

               
Conread position:
               
1-332
               

               
Cow position:
               
chr25:20523050-20523370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
109, 25
               

               
Conread position:
               
1-332
               

               
Cow position:
               
chr25:22731013-22730693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 70
               

               
Conread position:
               
1-340
               

               
Cow position:
               
chr25:21668436-21668098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
100, 72
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr25:36020599-36020251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
72, 42
               

               
Conread position:
               
1-354
               

               
Cow position:
               
chr25:9002857-9002513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 41
               

               
Conread position:
               
1-355
               

               
Cow position:
               
chr25:26679415-26679065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 70
               

               
Conread position:
               
1-356
               

               
Cow position:
               
chr25:41150776-41151124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
85, 72
               

               
Conread position:
               
1-357
               

               
Cow position:
               
chr25:447973-448332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 25
               

               
Conread position:
               
1-359
               

               
Cow position:
               
chr25:7380650-7381007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 24
               

               
Conread position:
               
1-362
               

               
Cow position:
               
chr25:8485295-8485667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 10
               

               
Conread position:
               
1-364
               

               
Cow position:
               
chr25:5921134-5920766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 12
               

               
Conread position:
               
1-364
               

               
Cow position:
               
chr25:26136632-26136996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 221
               

               
Conread position:
               
1-369
               

               
Cow position:
               
chr25:11316090-11315733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 72
               

               
Conread position:
               
1-370
               

               
Cow position:
               
chr25:21893522-21893162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 72
               

               
Conread position:
               
1-373
               

               
Cow position:
               
chr25:18894523-18894900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 171
               

               
Conread position:
               
1-380
               

               
Cow position:
               
chr25:11543095-11542725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
72, 25
               

               
Conread position:
               
1-380
               

               
Cow position:
               
chr25:26259323-26259680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 28
               

               
Conread position:
               
1-387
               

               
Cow position:
               
chr25:26134234-26133846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 240
               

               
Conread position:
               
1-390
               

               
Cow position:
               
chr25:12755303-12755686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 72
               

               
Conread position:
               
1-392
               

               
Cow position:
               
chr25:15409734-15410108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 101
               

               
Conread position:
               
1-397
               

               
Cow position:
               
chr25:7750635-7750248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 25
               

               
Conread position:
               
1-397
               

               
Cow position:
               
chr25:13272757-13272367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 72
               

               
Conread position:
               
1-397
               

               
Cow position:
               
chr25:17704927-17704547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 68
               

               
Conread position:
               
1-402
               

               
Cow position:
               
chr25:40904639-40905036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 225
               

               
Conread position:
               
1-405
               

               
Cow position:
               
chr25:26089639-26090025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 22
               

               
Conread position:
               
1-408
               

               
Cow position:
               
chr25:24651269-24651669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 72
               

               
Conread position:
               
1-409
               

               
Cow position:
               
chr25:14720920-14720539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 58
               

               
Conread position:
               
1-409
               

               
Cow position:
               
chr25:34768560-34768934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 59
               

               
Conread position:
               
1-412
               

               
Cow position:
               
chr25:7008108-7007699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 99
               

               
Conread position:
               
1-415
               

               
Cow position:
               
chr25:12899954-12899535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 110
               

               
Conread position:
               
1-427
               

               
Cow position:
               
chr25:1763272-1762875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 67
               

               
Conread position:
               
1-429
               

               
Cow position:
               
chr25:29826607-29826176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 112
               

               
Conread position:
               
1-433
               

               
Cow position:
               
chr25:13380410-13380854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 314
               

               
Conread position:
               
1-447
               

               
Cow position:
               
chr25:24669264-24669682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 71
               

               
Conread position:
               
1-448
               

               
Cow position:
               
chr25:19130042-19129599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 72
               

               
Conread position:
               
1-454
               

               
Cow position:
               
chr25:7306478-7306039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 70
               

               
Conread position:
               
1-454
               

               
Cow position:
               
chr25:33550699-33550247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 68
               

               
Conread position:
               
1-456
               

               
Cow position:
               
chr25:19679540-19679081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 72
               

               
Conread position:
               
1-464
               

               
Cow position:
               
chr25:14833480-14833922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 110
               

               
Conread position:
               
1-464
               

               
Cow position:
               
chr25:20008322-20007871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 71
               

               
Conread position:
               
1-464
               

               
Cow position:
               
chr25:38135941-38135478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 109
               

               
Conread position:
               
1-465
               

               
Cow position:
               
chr25:9989914-9990361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 226
               

               
Conread position:
               
1-465
               

               
Cow position:
               
chr25:26701208-26700770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 68
               

               
Conread position:
               
1-468
               

               
Cow position:
               
chr25:14513294-14512843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 62
               

               
Conread position:
               
1-473
               

               
Cow position:
               
chr25:5834055-5834531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 9
               

               
Conread position:
               
1-488
               

               
Cow position:
               
chr25:6473888-6474396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 320
               

               
Conread position:
               
1-494
               

               
Cow position:
               
chr25:16318962-16319428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 40
               

               
Conread position:
               
1-508
               

               
Cow position:
               
chr25:23053751-23053238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 218
               

               
Conread position:
               
1-531
               

               
Cow position:
               
chr25:21245405-21245948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
414
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 226
               

               
Conread position:
               
1-535
               

               
Cow position:
               
chr25:15273852-15273344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 55
               

               
Conread position:
               
1-539
               

               
Cow position:
               
chr25:26524150-26523627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 171
               

               
Conread position:
               
1-548
               

               
Cow position:
               
chr25:5846617-5847154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 221
               

               
Conread position:
               
1-584
               

               
Cow position:
               
chr25:18720939-18721492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
594
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 72
               

               
Conread position:
               
1-584
               

               
Cow position:
               
chr25:26087706-26087119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
599
               

               
Alignm identity:
               
462
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 66
               

               
Conread position:
               
1-584
               

               
Cow position:
               
chr25:37448615-37448044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
596
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
100, 56
               

               
Conread position:
               
1-587
               

               
Cow position:
               
chr25:6463840-6464427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
600
               

               
Alignm identity:
               
437
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 15
               

               
Conread position:
               
1-592
               

               
Cow position:
               
chr25:26224848-26225441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
617
               

               
Alignm identity:
               
463
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 56
               

               
Conread position:
               
1-603
               

               
Cow position:
               
chr25:20069901-20069312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
620
               

               
Alignm identity:
               
458
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 34
               

               
Conread position:
               
1-603
               

               
Cow position:
               
chr25:30319260-30319863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
622
               

               
Alignm identity:
               
479
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 162
               

               
Conread position:
               
1-606
               

               
Cow position:
               
chr25:6470018-6470632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
625
               

               
Alignm identity:
               
451
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 68
               

               
Conread position:
               
1-617
               

               
Cow position:
               
chr25:7217005-7216393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
638
               

               
Alignm identity:
               
483
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 67
               

               
Conread position:
               
1-617
               

               
Cow position:
               
chr25:14791942-14791329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
627
               

               
Alignm identity:
               
479
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 75
               

               
Conread position:
               
1-623
               

               
Cow position:
               
chr25:10504147-10504774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
644
               

               
Alignm identity:
               
464
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 53
               

               
Conread position:
               
1-624
               

               
Cow position:
               
chr25:33663721-33664332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
638
               

               
Alignm identity:
               
453
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 68
               

               
Conread position:
               
1-625
               

               
Cow position:
               
chr25:1838431-1837796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
648
               

               
Alignm identity:
               
486
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 85
               

               
Conread position:
               
1-625
               

               
Cow position:
               
chr25:10407223-10407855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
642
               

               
Alignm identity:
               
477
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 79
               

               
Conread position:
               
1-627
               

               
Cow position:
               
chr25:11956992-11956388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
637
               

               
Alignm identity:
               
456
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 76
               

               
Conread position:
               
1-627
               

               
Cow position:
               
chr25:24573246-24572632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
642
               

               
Alignm identity:
               
457
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 23
               

               
Conread position:
               
1-627
               

               
Cow position:
               
chr25:35348094-35347466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
642
               

               
Alignm identity:
               
449
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 157
               

               
Conread position:
               
1-627
               

               
Cow position:
               
chr25:36746260-36746885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
642
               

               
Alignm identity:
               
436
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 69
               

               
Conread position:
               
1-628
               

               
Cow position:
               
chr25:3992968-3992350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
641
               

               
Alignm identity:
               
448
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 79
               

               
Conread position:
               
1-629
               

               
Cow position:
               
chr25:8120969-8120336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
644
               

               
Alignm identity:
               
462
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 72
               

               
Conread position:
               
1-629
               

               
Cow position:
               
chr25:8576862-8576252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
647
               

               
Alignm identity:
               
434
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
198, 56
               

               
Conread position:
               
1-629
               

               
Cow position:
               
chr25:17658800-17658174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
641
               

               
Alignm identity:
               
504
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 72
               

               
Conread position:
               
1-629
               

               
Cow position:
               
chr25:22315392-22314760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
645
               

               
Alignm identity:
               
455
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 68
               

               
Conread position:
               
1-629
               

               
Cow position:
               
chr25:27868999-27868369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
646
               

               
Alignm identity:
               
458
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 25
               

               
Conread position:
               
2-165
               

               
Cow position:
               
chr25:13855663-13855497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
35, 108
               

               
Conread position:
               
2-177
               

               
Cow position:
               
chr25:6061548-6061374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
71, 10
               

               
Conread position:
               
2-189
               

               
Cow position:
               
chr25:28945203-28945019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
89, 24
               

               
Conread position:
               
2-201
               

               
Cow position:
               
chr25:8898622-8898419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
2-211
               

               
Cow position:
               
chr25:3744547-3744769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
2-220
               

               
Cow position:
               
chr25:536116-536337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
70, 219
               

               
Conread position:
               
2-222
               

               
Cow position:
               
chr25:12657119-12657343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
2-243
               

               
Cow position:
               
chr25:26306016-26306259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 70
               

               
Conread position:
               
2-268
               

               
Cow position:
               
chr25:8345814-8346080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
71, 163
               

               
Conread position:
               
2-326
               

               
Cow position:
               
chr25:18201742-18202060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 22
               

               
Conread position:
               
2-339
               

               
Cow position:
               
chr25:7673494-7673133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
27, 291
               

               
Conread position:
               
2-365
               

               
Cow position:
               
chr25:14931564-14931936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
71, 130
               

               
Conread position:
               
2-396
               

               
Cow position:
               
chr25:27801466-27801089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 103
               

               
Conread position:
               
2-397
               

               
Cow position:
               
chr25:22179097-22178719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 60
               

               
Conread position:
               
2-453
               

               
Cow position:
               
chr25:9269527-9269115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 65
               

               
Conread position:
               
2-464
               

               
Cow position:
               
chr25:432861-433345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 21
               

               
Conread position:
               
2-465
               

               
Cow position:
               
chr25:11139828-11139380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 219
               

               
Conread position:
               
2-501
               

               
Cow position:
               
chr25:12260699-12261198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 289
               

               
Conread position:
               
2-508
               

               
Cow position:
               
chr25:12098024-12097524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 129
               

               
Conread position:
               
2-554
               

               
Cow position:
               
chr25:33959063-33959625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 57
               

               
Conread position:
               
2-609
               

               
Cow position:
               
chr25:2414984-2414412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
621
               

               
Alignm identity:
               
437
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 67
               

               
Conread position:
               
2-616
               

               
Cow position:
               
chr25:4521654-4522245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
625
               

               
Alignm identity:
               
451
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 74
               

               
Conread position:
               
3-154
               

               
Cow position:
               
chr25:1509777-1509932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
3-154
               

               
Cow position:
               
chr25:11543414-11543558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
97, 30
               

               
Conread position:
               
3-169
               

               
Cow position:
               
chr25:3141687-3141522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
91, 10
               

               
Conread position:
               
3-169
               

               
Cow position:
               
chr25:22768404-22768237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
3-170
               

               
Cow position:
               
chr25:14944942-14945111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
70, 13
               

               
Conread position:
               
3-171
               

               
Cow position:
               
chr25:28662293-28662127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
90, 66
               

               
Conread position:
               
3-171
               

               
Cow position:
               
chr25:36074596-36074424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
59, 36
               

               
Conread position:
               
3-172
               

               
Cow position:
               
chr25:22565780-22565942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
99, 21
               

               
Conread position:
               
3-173
               

               
Cow position:
               
chr25:9023931-9023766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
90, 56
               

               
Conread position:
               
3-174
               

               
Cow position:
               
chr25:7684713-7684884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
97, 69
               

               
Conread position:
               
3-175
               

               
Cow position:
               
chr25:4192193-4192018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
70, 171
               

               
Conread position:
               
3-175
               

               
Cow position:
               
chr25:11169064-11168885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
70, 24
               

               
Conread position:
               
3-178
               

               
Cow position:
               
chr25:22373300-22373480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
3-178
               

               
Cow position:
               
chr25:26156599-26156767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
97, 65
               

               
Conread position:
               
3-181
               

               
Cow position:
               
chr25:12223750-12223575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
111, 65
               

               
Conread position:
               
3-184
               

               
Cow position:
               
chr25:18646766-18646589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
90, 65
               

               
Conread position:
               
3-187
               

               
Cow position:
               
chr25:13542797-13542985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
3-192
               

               
Cow position:
               
chr25:11760274-11760454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
97, 50
               

               
Conread position:
               
3-198
               

               
Cow position:
               
chr25:31514370-31514171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 71
               

               
Conread position:
               
3-211
               

               
Cow position:
               
chr25:14107023-14106809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
70, 160
               

               
Conread position:
               
3-212
               

               
Cow position:
               
chr25:10656852-10657066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
3-213
               

               
Cow position:
               
chr25:26072377-26072582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
97, 64
               

               
Conread position:
               
3-218
               

               
Cow position:
               
chr25:18491223-18491008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
90, 52
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr25:5797693-5797473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
6, 218
               

               
Conread position:
               
3-222
               

               
Cow position:
               
chr25:11897433-11897661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
3-230
               

               
Cow position:
               
chr25:18288584-18288810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
97, 69
               

               
Conread position:
               
3-232
               

               
Cow position:
               
chr25:15565804-15566049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
50, 41
               

               
Conread position:
               
3-234
               

               
Cow position:
               
chr25:10610933-10611168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
69, 9
               

               
Conread position:
               
3-239
               

               
Cow position:
               
chr25:22154217-22153984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
70, 176
               

               
Conread position:
               
3-246
               

               
Cow position:
               
chr25:24863054-24862820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
89, 54
               

               
Conread position:
               
3-256
               

               
Cow position:
               
chr25:33555794-33555542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
70, 140
               

               
Conread position:
               
3-272
               

               
Cow position:
               
chr25:41130416-41130146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
67, 129
               

               
Conread position:
               
3-275
               

               
Cow position:
               
chr25:5646323-5646598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
69, 104
               

               
Conread position:
               
3-282
               

               
Cow position:
               
chr25:26578414-26578703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
70, 47
               

               
Conread position:
               
3-302
               

               
Cow position:
               
chr25:1823905-1824207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 222
               

               
Conread position:
               
3-310
               

               
Cow position:
               
chr25:11432766-11433073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
98, 49
               

               
Conread position:
               
3-313
               

               
Cow position:
               
chr25:33557452-33557150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
82, 70
               

               
Conread position:
               
3-321
               

               
Cow position:
               
chr25:22346969-22346644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
39, 222
               

               
Conread position:
               
3-325
               

               
Cow position:
               
chr25:22756798-22756476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 224
               

               
Conread position:
               
3-325
               

               
Cow position:
               
chr25:36835246-36835557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
87, 65
               

               
Conread position:
               
3-326
               

               
Cow position:
               
chr25:14152374-14152054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
70, 217
               

               
Conread position:
               
3-328
               

               
Cow position:
               
chr25:33686496-33686815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 199
               

               
Conread position:
               
3-337
               

               
Cow position:
               
chr25:11065953-11066293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
51, 232
               

               
Conread position:
               
3-360
               

               
Cow position:
               
chr25:30462135-30462467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 20
               

               
Conread position:
               
3-368
               

               
Cow position:
               
chr25:27532487-27532849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 22
               

               
Conread position:
               
3-397
               

               
Cow position:
               
chr25:13295049-13294704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
70, 23
               

               
Conread position:
               
3-414
               

               
Cow position:
               
chr25:17914970-17914561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 209
               

               
Conread position:
               
3-433
               

               
Cow position:
               
chr25:21289534-21289102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 130
               

               
Conread position:
               
3-464
               

               
Cow position:
               
chr25:20785401-20785852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 23
               

               
Conread position:
               
3-555
               

               
Cow position:
               
chr25:6682864-6683427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 282
               

               
Conread position:
               
3-561
               

               
Cow position:
               
chr25:8226290-8225711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
585
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 34
               

               
Conread position:
               
3-598
               

               
Cow position:
               
chr25:13325755-13325192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
610
               

               
Alignm identity:
               
441
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 54
               

               
Conread position:
               
3-611
               

               
Cow position:
               
chr25:30852951-30852351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
632
               

               
Alignm identity:
               
431
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 70
               

               
Conread position:
               
3-618
               

               
Cow position:
               
chr25:7641269-7641877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
628
               

               
Alignm identity:
               
446
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 64
               

               
Conread position:
               
3-629
               

               
Cow position:
               
chr25:16921607-16922234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
643
               

               
Alignm identity:
               
500
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 228
               

               
Conread position:
               
4-109
               

               
Cow position:
               
chr25:13384671-13384563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
4-197
               

               
Cow position:
               
chr25:20638216-20638022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
4-212
               

               
Cow position:
               
chr25:6259069-6258859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
89, 68
               

               
Conread position:
               
4-212
               

               
Cow position:
               
chr25:36873152-36873357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
91, 68
               

               
Conread position:
               
4-280
               

               
Cow position:
               
chr25:17725220-17724966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
69, 76
               

               
Conread position:
               
4-354
               

               
Cow position:
               
chr25:13443222-13443566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 202
               

               
Conread position:
               
4-456
               

               
Cow position:
               
chr25:35612115-35612562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 210
               

               
Conread position:
               
4-458
               

               
Cow position:
               
chr25:17566776-17566324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 38
               

               
Conread position:
               
4-473
               

               
Cow position:
               
chr25:20023209-20023677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 45
               

               
Conread position:
               
4-478
               

               
Cow position:
               
chr25:36535233-36535716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 23
               

               
Conread position:
               
4-530
               

               
Cow position:
               
chr25:6947866-6948396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 170
               

               
Conread position:
               
4-598
               

               
Cow position:
               
chr25:36082052-36081488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
600
               

               
Alignm identity:
               
449
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 59
               

               
Conread position:
               
4-610
               

               
Cow position:
               
chr25:40321111-40321714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
627
               

               
Alignm identity:
               
438
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 25
               

               
Conread position:
               
4-629
               

               
Cow position:
               
chr25:21191662-21191048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
638
               

               
Alignm identity:
               
460
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 41
               

               
Conread position:
               
5-136
               

               
Cow position:
               
chr25:22119472-22119605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
68, 21
               

               
Conread position:
               
5-163
               

               
Cow position:
               
chr25:21547341-21547182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
88, 67
               

               
Conread position:
               
5-173
               

               
Cow position:
               
chr25:36155995-36155833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
87, 63
               

               
Conread position:
               
5-277
               

               
Cow position:
               
chr25:12305463-12305189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 207
               

               
Conread position:
               
5-286
               

               
Cow position:
               
chr25:25716829-25716557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
112, 68
               

               
Conread position:
               
5-303
               

               
Cow position:
               
chr25:30817076-30816773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 217
               

               
Conread position:
               
5-305
               

               
Cow position:
               
chr25:22317868-22317567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
67, 216
               

               
Conread position:
               
5-617
               

               
Cow position:
               
chr25:11585713-11585084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
639
               

               
Alignm identity:
               
482
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 225
               

               
Conread position:
               
5-618
               

               
Cow position:
               
chr25:23828946-23829545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
625
               

               
Alignm identity:
               
438
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 67
               

               
Conread position:
               
6-146
               

               
Cow position:
               
chr25:22571142-22571000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
94, 65
               

               
Conread position:
               
6-153
               

               
Cow position:
               
chr25:7623005-7622854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
6-187
               

               
Cow position:
               
chr25:23323680-23323491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
6-278
               

               
Cow position:
               
chr25:16100769-16100497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
57, 144
               

               
Conread position:
               
6-317
               

               
Cow position:
               
chr25:36872546-36872235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
67, 215
               

               
Conread position:
               
6-365
               

               
Cow position:
               
chr25:23244821-23245182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 53
               

               
Conread position:
               
6-387
               

               
Cow position:
               
chr25:17342644-17342257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 214
               

               
Conread position:
               
6-455
               

               
Cow position:
               
chr25:18487853-18487414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 207
               

               
Conread position:
               
7-201
               

               
Cow position:
               
chr25:36872873-36873069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
93, 65
               

               
Conread position:
               
7-208
               

               
Cow position:
               
chr25:33101430-33101625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
87, 61
               

               
Conread position:
               
7-228
               

               
Cow position:
               
chr25:35109096-35109309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
85, 59
               

               
Conread position:
               
7-233
               

               
Cow position:
               
chr25:36073817-36074039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
66, 113
               

               
Conread position:
               
7-354
               

               
Cow position:
               
chr25:23779151-23779486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
94, 66
               

               
Conread position:
               
7-628
               

               
Cow position:
               
chr25:11661648-11662253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
628
               

               
Alignm identity:
               
445
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
369, 16
               

               
Conread position:
               
8-430
               

               
Cow position:
               
chr25:41132186-41132590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 9
               

               
Conread position:
               
8-441
               

               
Cow position:
               
chr25:26338644-26338199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 216
               

               
Conread position:
               
10-160
               

               
Cow position:
               
chr25:11855368-11855521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
63, 135
               

               
Conread position:
               
10-166
               

               
Cow position:
               
chr25:14849471-14849631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
10-219
               

               
Cow position:
               
chr25:9107354-9107555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
91, 13
               

               
Conread position:
               
10-294
               

               
Cow position:
               
chr25:17474333-17474615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 16
               

               
Conread position:
               
10-378
               

               
Cow position:
               
chr25:17190575-17190927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
245, 49
               

               
Conread position:
               
10-411
               

               
Cow position:
               
chr25:2624973-2624588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 49
               

               
Conread position:
               
13-191
               

               
Cow position:
               
chr25:8347829-8347649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
87, 59
               

               
Conread position:
               
13-276
               

               
Cow position:
               
chr25:12807219-12806958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
60, 139
               

               
Conread position:
               
13-325
               

               
Cow position:
               
chr25:24207236-24207551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
60, 219
               

               
Conread position:
               
13-380
               

               
Cow position:
               
chr25:30620058-30620441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
7, 104
               

               
Conread position:
               
13-615
               

               
Cow position:
               
chr25:16867421-16866810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
627
               

               
Alignm identity:
               
472
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 219
               

               
Conread position:
               
14-152
               

               
Cow position:
               
chr25:8596293-8596434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
8, 59
               

               
Conread position:
               
14-321
               

               
Cow position:
               
chr25:3373212-3373501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
104, 55
               

               
Conread position:
               
14-482
               

               
Cow position:
               
chr25:22203522-22203977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 75
               

               
Conread position:
               
15-212
               

               
Cow position:
               
chr25:6718080-6718270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
81, 53
               

               
Conread position:
               
15-214
               

               
Cow position:
               
chr25:21910029-21909831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
58, 149
               

               
Conread position:
               
15-274
               

               
Cow position:
               
chr25:7806142-7805880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
57, 179
               

               
Conread position:
               
15-312
               

               
Cow position:
               
chr25:20157119-20157419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
48, 201
               

               
Conread position:
               
15-331
               

               
Cow position:
               
chr25:20664105-20664436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
15-355
               

               
Cow position:
               
chr25:6996959-6996619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 54
               

               
Conread position:
               
15-459
               

               
Cow position:
               
chr25:18075840-18075405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 206
               

               
Conread position:
               
15-522
               

               
Cow position:
               
chr25:6803722-6803231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 205
               

               
Conread position:
               
17-169
               

               
Cow position:
               
chr25:32745507-32745357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
76, 55
               

               
Conread position:
               
17-309
               

               
Cow position:
               
chr25:9316196-9315902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
56, 266
               

               
Conread position:
               
17-325
               

               
Cow position:
               
chr25:15634294-15634609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
56, 228
               

               
Conread position:
               
17-396
               

               
Cow position:
               
chr25:8157337-8157711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 56
               

               
Conread position:
               
17-475
               

               
Cow position:
               
chr25:33457901-33457427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 46
               

               
Conread position:
               
17-629
               

               
Cow position:
               
chr25:18294139-18294756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
629
               

               
Alignm identity:
               
450
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 211
               

               
Conread position:
               
18-465
               

               
Cow position:
               
chr25:6238296-6237853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
90, 59
               

               
Conread position:
               
19-623
               

               
Cow position:
               
chr25:788427-787838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
612
               

               
Alignm identity:
               
445
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 52
               

               
Conread position:
               
21-173
               

               
Cow position:
               
chr25:7298725-7298889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
21-571
               

               
Cow position:
               
chr25:16065050-16064517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
433
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 16
               

               
Conread position:
               
21-629
               

               
Cow position:
               
chr25:33256533-33255932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
629
               

               
Alignm identity:
               
470
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 168
               

               
Conread position:
               
22-146
               

               
Cow position:
               
chr25:18568047-18568175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
22-214
               

               
Cow position:
               
chr25:35384166-35384363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
50, 172
               

               
Conread position:
               
22-277
               

               
Cow position:
               
chr25:7799721-7799466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
51, 115
               

               
Conread position:
               
23-188
               

               
Cow position:
               
chr25:13049134-13049302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
50, 109
               

               
Conread position:
               
23-483
               

               
Cow position:
               
chr25:12778392-12778821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
353, 45
               

               
Conread position:
               
24-173
               

               
Cow position:
               
chr25:30551678-30551827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
7, 89
               

               
Conread position:
               
26-185
               

               
Cow position:
               
chr25:15573552-15573391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
74, 46
               

               
Conread position:
               
26-251
               

               
Cow position:
               
chr25:7468263-7468041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
47, 155
               

               
Conread position:
               
29-513
               

               
Cow position:
               
chr25:6424419-6424905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 102
               

               
Conread position:
               
30-148
               

               
Cow position:
               
chr25:23769729-23769847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
70, 28
               

               
Conread position:
               
36-178
               

               
Cow position:
               
chr25:6999080-6999226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
37-391
               

               
Cow position:
               
chr25:25861192-25861556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 81
               

               
Conread position:
               
37-438
               

               
Cow position:
               
chr25:18988532-18988132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 36
               

               
Conread position:
               
39-290
               

               
Cow position:
               
chr25:30450185-30449942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
34, 102
               

               
Conread position:
               
42-167
               

               
Cow position:
               
chr25:12773430-12773302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
35, 123
               

               
Conread position:
               
44-382
               

               
Cow position:
               
chr25:18906034-18905694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 176
               

               
Conread position:
               
47-465
               

               
Cow position:
               
chr25:21267130-21266736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
49, 13
               

               
Conread position:
               
48-453
               

               
Cow position:
               
chr25:16400143-16400507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
50, 32
               

               
Conread position:
               
49-461
               

               
Cow position:
               
chr25:28187802-28188216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 157
               

               
Conread position:
               
49-621
               

               
Cow position:
               
chr25:41363011-41363571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
581
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 28
               

               
Conread position:
               
52-190
               

               
Cow position:
               
chr25:27854416-27854556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
52-466
               

               
Cow position:
               
chr25:22296893-22297288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 47
               

               
Conread position:
               
53-281
               

               
Cow position:
               
chr25:33204944-33205171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
13, 17
               

               
Conread position:
               
53-464
               

               
Cow position:
               
chr25:33978083-33978470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 36
               

               
Conread position:
               
53-614
               

               
Cow position:
               
chr25:41354164-41354726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
577
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 183
               

               
Conread position:
               
54-339
               

               
Cow position:
               
chr25:34378968-34379250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
11, 17
               

               
Conread position:
               
56-626
               

               
Cow position:
               
chr25:13569043-13569611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
590
               

               
Alignm identity:
               
439
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 9
               

               
Conread position:
               
57-453
               

               
Cow position:
               
chr25:7581295-7581685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 16
               

               
Conread position:
               
58-216
               

               
Cow position:
               
chr25:4009229-4009065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
58-216
               

               
Cow position:
               
chr25:20862587-20862430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
15, 59
               

               
Conread position:
               
58-224
               

               
Cow position:
               
chr25:31762475-31762643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
36, 163
               

               
Conread position:
               
58-240
               

               
Cow position:
               
chr25:28666584-28666393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
18, 86
               

               
Conread position:
               
58-276
               

               
Cow position:
               
chr25:20447705-20447485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
19, 136
               

               
Conread position:
               
58-277
               

               
Cow position:
               
chr25:26052037-26051814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
15, 35
               

               
Conread position:
               
58-301
               

               
Cow position:
               
chr25:12252675-12252923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
15, 115
               

               
Conread position:
               
58-344
               

               
Cow position:
               
chr25:30619199-30618914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 105
               

               
Conread position:
               
58-374
               

               
Cow position:
               
chr25:22750874-22751190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 23
               

               
Conread position:
               
58-424
               

               
Cow position:
               
chr25:36017667-36017311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 102
               

               
Conread position:
               
58-465
               

               
Cow position:
               
chr25:23917974-23917572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 15
               

               
Conread position:
               
59-432
               

               
Cow position:
               
chr25:61783-61419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 163
               

               
Conread position:
               
60-216
               

               
Cow position:
               
chr25:26161102-26160937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
60-299
               

               
Cow position:
               
chr25:26059620-26059396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
51, 13
               

               
Conread position:
               
60-465
               

               
Cow position:
               
chr25:14196991-14196585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 13
               

               
Conread position:
               
61-461
               

               
Cow position:
               
chr25:24452035-24452434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 49
               

               
Conread position:
               
62-270
               

               
Cow position:
               
chr25:11679265-11679064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
65, 14
               

               
Conread position:
               
62-548
               

               
Cow position:
               
chr25:9056307-9055846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 77
               

               
Conread position:
               
63-284
               

               
Cow position:
               
chr25:36120627-36120408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
10, 157
               

               
Conread position:
               
63-455
               

               
Cow position:
               
chr25:31230119-31230483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
10, 23
               

               
Conread position:
               
64-462
               

               
Cow position:
               
chr25:21894758-21895150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 80
               

               
Conread position:
               
64-628
               

               
Cow position:
               
chr25:2499394-2498829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
581
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 9
               

               
Conread position:
               
65-349
               

               
Cow position:
               
chr25:5474103-5474383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 153
               

               
Conread position:
               
65-423
               

               
Cow position:
               
chr25:10217922-10218279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 157
               

               
Conread position:
               
67-209
               

               
Cow position:
               
chr25:15218255-15218115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
36, 6
               

               
Conread position:
               
69-342
               

               
Cow position:
               
chr25:6688066-6687800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
49, 107
               

               
Conread position:
               
70-399
               

               
Cow position:
               
chr25:13387929-13387608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
31, 161
               

               
Conread position:
               
72-220
               

               
Cow position:
               
chr25:34782584-34782432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
28, 109
               

               
Conread position:
               
72-222
               

               
Cow position:
               
chr25:30656530-30656682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
24, 87
               

               
Conread position:
               
72-255
               

               
Cow position:
               
chr25:5920200-5920019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
7, 146
               

               
Conread position:
               
72-282
               

               
Cow position:
               
chr25:26240658-26240446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
15, 61
               

               
Conread position:
               
72-440
               

               
Cow position:
               
chr25:18266284-18265918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
14, 238
               

               
Conread position:
               
72-628
               

               
Cow position:
               
chr25:26655026-26654468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
439
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 87
               

               
Conread position:
               
73-335
               

               
Cow position:
               
chr25:12997723-12997449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
28, 173
               

               
Conread position:
               
73-388
               

               
Cow position:
               
chr25:13672521-13672195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 164
               

               
Conread position:
               
74-457
               

               
Cow position:
               
chr25:5407860-5407488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
16, 211
               

               
Conread position:
               
75-537
               

               
Cow position:
               
chr25:38982209-38981759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 80
               

               
Conread position:
               
76-332
               

               
Cow position:
               
chr25:22242078-22241839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
27, 75
               

               
Conread position:
               
76-346
               

               
Cow position:
               
chr25:36501126-36501392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
30, 128
               

               
Conread position:
               
76-369
               

               
Cow position:
               
chr25:15440667-15440957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 24
               

               
Conread position:
               
76-395
               

               
Cow position:
               
chr25:20133200-20133515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 147
               

               
Conread position:
               
76-422
               

               
Cow position:
               
chr25:6961038-6961377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 165
               

               
Conread position:
               
76-436
               

               
Cow position:
               
chr25:12840603-12840959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 156
               

               
Conread position:
               
76-629
               

               
Cow position:
               
chr25:21951245-21950686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 179
               

               
Conread position:
               
77-215
               

               
Cow position:
               
chr25:13503548-13503406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
77-350
               

               
Cow position:
               
chr25:31732207-31732492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
15, 165
               

               
Conread position:
               
77-486
               

               
Cow position:
               
chr25:14118200-14117815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
13, 28
               

               
Conread position:
               
77-504
               

               
Cow position:
               
chr25:25051263-25051699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 164
               

               
Conread position:
               
78-225
               

               
Cow position:
               
chr25:35090456-35090611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
78-610
               

               
Cow position:
               
chr25:18564599-18564070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 84
               

               
Conread position:
               
80-214
               

               
Cow position:
               
chr25:36840507-36840370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
16, 57
               

               
Conread position:
               
80-464
               

               
Cow position:
               
chr25:24405623-24406009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 227
               

               
Conread position:
               
80-550
               

               
Cow position:
               
chr25:40956877-40957347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 40
               

               
Conread position:
               
81-346
               

               
Cow position:
               
chr25:8961880-8961620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 86
               

               
Conread position:
               
82-255
               

               
Cow position:
               
chr25:23817731-23817908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
88-577
               

               
Cow position:
               
chr25:4547615-4548111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 134
               

               
Conread position:
               
90-629
               

               
Cow position:
               
chr25:9349184-9349705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 85
               

               
Conread position:
               
94-581
               

               
Cow position:
               
chr25:31732640-31733125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
281, 130
               

               
Conread position:
               
95-435
               

               
Cow position:
               
chr25:15377421-15377092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 59
               

               
Conread position:
               
96-401
               

               
Cow position:
               
chr25:16714175-16714480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 107
               

               
Conread position:
               
99-422
               

               
Cow position:
               
chr25:38425448-38425138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
101-277
               

               
Cow position:
               
chr25:13384540-13384367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
13, 42
               

               
Conread position:
               
104-496
               

               
Cow position:
               
chr25:12817448-12817069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
271, 7
               

               
Conread position:
               
106-366
               

               
Cow position:
               
chr25:17144509-17144253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
104, 5
               

               
Conread position:
               
110-276
               

               
Cow position:
               
chr25:7023246-7023080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
110-464
               

               
Cow position:
               
chr25:11131662-11131316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 135
               

               
Conread position:
               
110-626
               

               
Cow position:
               
chr25:20076575-20076054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 196
               

               
Conread position:
               
111-463
               

               
Cow position:
               
chr25:37594483-37594146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
309, 166
               

               
Conread position:
               
112-360
               

               
Cow position:
               
chr25:19317341-19317094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
109, 38
               

               
Conread position:
               
112-515
               

               
Cow position:
               
chr25:6885895-6886294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 127
               

               
Conread position:
               
116-627
               

               
Cow position:
               
chr25:2046488-2046990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 88
               

               
Conread position:
               
119-464
               

               
Cow position:
               
chr25:12081253-12081584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
301, 55
               

               
Conread position:
               
123-628
               

               
Cow position:
               
chr25:34659040-34659544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 85
               

               
Conread position:
               
126-440
               

               
Cow position:
               
chr25:22575462-22575764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
249, 76
               

               
Conread position:
               
126-629
               

               
Cow position:
               
chr25:25753934-25754436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 94
               

               
Conread position:
               
129-334
               

               
Cow position:
               
chr25:7449859-7449666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
130-255
               

               
Cow position:
               
chr25:16361614-16361741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
135-309
               

               
Cow position:
               
chr25:24504448-24504616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
138-462
               

               
Cow position:
               
chr25:9754046-9754342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
237, 80
               

               
Conread position:
               
138-629
               

               
Cow position:
               
chr25:20395241-20394758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
332, 59
               

               
Conread position:
               
140-523
               

               
Cow position:
               
chr25:9956990-9957368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
280, 67
               

               
Conread position:
               
147-561
               

               
Cow position:
               
chr25:12239106-12239508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 64
               

               
Conread position:
               
149-625
               

               
Cow position:
               
chr25:1735281-1735753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
227, 64
               

               
Conread position:
               
152-618
               

               
Cow position:
               
chr25:25827507-25827031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 150
               

               
Conread position:
               
154-425
               

               
Cow position:
               
chr25:35333192-35332935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
238, 21
               

               
Conread position:
               
155-302
               

               
Cow position:
               
chr25:7299179-7299330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
156-365
               

               
Cow position:
               
chr25:11319034-11318837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
137, 58
               

               
Conread position:
               
158-345
               

               
Cow position:
               
chr25:9047091-9047281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
8, 18
               

               
Conread position:
               
158-509
               

               
Cow position:
               
chr25:9023663-9023325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 60
               

               
Conread position:
               
159-629
               

               
Cow position:
               
chr25:9396475-9396008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 54
               

               
Conread position:
               
160-440
               

               
Cow position:
               
chr25:24008159-24008423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
149, 58
               

               
Conread position:
               
160-629
               

               
Cow position:
               
chr25:12204503-12204028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 15
               

               
Conread position:
               
161-618
               

               
Cow position:
               
chr25:11054929-11054501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
311, 11
               

               
Conread position:
               
163-403
               

               
Cow position:
               
chr25:26269912-26270142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
212, 106
               

               
Conread position:
               
163-629
               

               
Cow position:
               
chr25:36779526-36779055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 150
               

               
Conread position:
               
164-309
               

               
Cow position:
               
chr25:13640405-13640265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
165-488
               

               
Cow position:
               
chr25:448319-448641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
210, 138
               

               
Conread position:
               
166-365
               

               
Cow position:
               
chr25:31705025-31704820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
166-366
               

               
Cow position:
               
chr25:21042408-21042208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
48, 141
               

               
Conread position:
               
167-342
               

               
Cow position:
               
chr25:22332784-22332612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
138, 51
               

               
Conread position:
               
169-360
               

               
Cow position:
               
chr25:36124704-36124510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
70, 54
               

               
Conread position:
               
169-422
               

               
Cow position:
               
chr25:36033457-36033209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
206, 35
               

               
Conread position:
               
170-365
               

               
Cow position:
               
chr25:6943092-6943291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
134, 48
               

               
Conread position:
               
170-621
               

               
Cow position:
               
chr25:7801159-7800703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 110
               

               
Conread position:
               
171-356
               

               
Cow position:
               
chr25:6121752-6121931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
174-296
               

               
Cow position:
               
chr25:21926542-21926663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
174-349
               

               
Cow position:
               
chr25:32587864-32588036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
174-386
               

               
Cow position:
               
chr25:23323214-23323011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
202, 42
               

               
Conread position:
               
174-404
               

               
Cow position:
               
chr25:13736299-13736520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
201, 41
               

               
Conread position:
               
174-462
               

               
Cow position:
               
chr25:35625170-35625438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 44
               

               
Conread position:
               
174-516
               

               
Cow position:
               
chr25:9961159-9961493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 44
               

               
Conread position:
               
174-611
               

               
Cow position:
               
chr25:5515028-5514587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 130
               

               
Conread position:
               
174-629
               

               
Cow position:
               
chr25:4002816-4002361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 52
               

               
Conread position:
               
174-629
               

               
Cow position:
               
chr25:12824003-12824469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
200, 160
               

               
Conread position:
               
176-361
               

               
Cow position:
               
chr25:36138637-36138811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
178, 25
               

               
Conread position:
               
176-403
               

               
Cow position:
               
chr25:14945438-14945650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
72, 42
               

               
Conread position:
               
176-453
               

               
Cow position:
               
chr25:16001513-16001779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
200, 48
               

               
Conread position:
               
176-454
               

               
Cow position:
               
chr25:13642300-13642575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 42
               

               
Conread position:
               
177-465
               

               
Cow position:
               
chr25:3983051-3982777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
199, 20
               

               
Conread position:
               
178-544
               

               
Cow position:
               
chr25:10138104-10137751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 87
               

               
Conread position:
               
179-465
               

               
Cow position:
               
chr25:35345040-35344766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
34, 22
               

               
Conread position:
               
180-608
               

               
Cow position:
               
chr25:41363974-41364389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
42, 127
               

               
Conread position:
               
181-454
               

               
Cow position:
               
chr25:8918269-8918537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 45
               

               
Conread position:
               
184-350
               

               
Cow position:
               
chr25:20789501-20789655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
184-426
               

               
Cow position:
               
chr25:7329553-7329313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 51
               

               
Conread position:
               
187-388
               

               
Cow position:
               
chr25:12520963-12521154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
167, 27
               

               
Conread position:
               
200-495
               

               
Cow position:
               
chr25:8347499-8347206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
105, 137
               

               
Conread position:
               
212-448
               

               
Cow position:
               
chr25:14467101-14467335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
76, 88
               

               
Conread position:
               
216-449
               

               
Cow position:
               
chr25:36026984-36026753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 96
               

               
Conread position:
               
218-473
               

               
Cow position:
               
chr25:10365780-10366030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 35
               

               
Conread position:
               
221-629
               

               
Cow position:
               
chr25:2111037-2110643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
199, 32
               

               
Conread position:
               
228-388
               

               
Cow position:
               
chr25:35110163-35110323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
148, 75
               

               
Conread position:
               
228-440
               

               
Cow position:
               
chr25:6255974-6256182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
34, 19
               

               
Conread position:
               
228-628
               

               
Cow position:
               
chr25:27504215-27504613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
105, 51
               

               
Conread position:
               
229-629
               

               
Cow position:
               
chr25:26112229-26111843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 74
               

               
Conread position:
               
233-616
               

               
Cow position:
               
chr25:41349446-41349837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
142, 71
               

               
Conread position:
               
239-465
               

               
Cow position:
               
chr25:17712488-17712264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
64, 107
               

               
Conread position:
               
243-418
               

               
Cow position:
               
chr25:2596133-2595954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
82, 61
               

               
Conread position:
               
260-629
               

               
Cow position:
               
chr25:18491005-18490635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 76
               

               
Conread position:
               
261-464
               

               
Cow position:
               
chr25:24167972-24168167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
115, 44
               

               
Conread position:
               
261-555
               

               
Cow position:
               
chr25:27622018-27621716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 147
               

               
Conread position:
               
269-410
               

               
Cow position:
               
chr25:16389369-16389507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
106, 86
               

               
Conread position:
               
269-628
               

               
Cow position:
               
chr25:40658223-40657860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
105, 70
               

               
Conread position:
               
272-456
               

               
Cow position:
               
chr25:40407552-40407730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
97, 0
               
Show alignments to all cow chromosomes.