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Cow genome map

           
Conread name:
           
rnca33b_d16.y1
        

               
Conread position:
               
1-93
               

               
Cow position:
               
chr27:23996355-23996263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
94
               

               
Alignm identity:
               
81
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
88, 71
               

               
Conread position:
               
1-121
               

               
Cow position:
               
chr27:20785887-20786011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
1-122
               

               
Cow position:
               
chr27:6751944-6752069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
1-137
               

               
Cow position:
               
chr27:27012462-27012602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
1-143
               

               
Cow position:
               
chr27:21101526-21101381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
72, 86
               

               
Conread position:
               
1-145
               

               
Cow position:
               
chr27:26154083-26154232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
1-151
               

               
Cow position:
               
chr27:12948031-12947877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
1-151
               

               
Cow position:
               
chr27:25000201-25000043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
1-159
               

               
Cow position:
               
chr27:11528695-11528856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
57, 72
               

               
Conread position:
               
1-164
               

               
Cow position:
               
chr27:9253346-9253183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
99, 72
               

               
Conread position:
               
1-166
               

               
Cow position:
               
chr27:15350586-15350415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
26, 121
               

               
Conread position:
               
1-166
               

               
Cow position:
               
chr27:26467795-26467628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
71, 139
               

               
Conread position:
               
1-167
               

               
Cow position:
               
chr27:26983929-26984095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
97, 58
               

               
Conread position:
               
1-170
               

               
Cow position:
               
chr27:4544585-4544412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
1-171
               

               
Cow position:
               
chr27:11208791-11208617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
1-171
               

               
Cow position:
               
chr27:20081365-20081192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
72, 163
               

               
Conread position:
               
1-172
               

               
Cow position:
               
chr27:9504319-9504491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
72, 155
               

               
Conread position:
               
1-173
               

               
Cow position:
               
chr27:18752613-18752795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
58, 136
               

               
Conread position:
               
1-173
               

               
Cow position:
               
chr27:21201956-21202132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
1-173
               

               
Cow position:
               
chr27:21951214-21951039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
1-173
               

               
Cow position:
               
chr27:29246378-29246208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
71, 23
               

               
Conread position:
               
1-175
               

               
Cow position:
               
chr27:6679611-6679433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
41, 33
               

               
Conread position:
               
1-175
               

               
Cow position:
               
chr27:27450117-27449944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
99, 68
               

               
Conread position:
               
1-175
               

               
Cow position:
               
chr27:31157576-31157753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
1-175
               

               
Cow position:
               
chr27:31515787-31515608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
1-178
               

               
Cow position:
               
chr27:20048403-20048578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
92, 71
               

               
Conread position:
               
1-178
               

               
Cow position:
               
chr27:20127532-20127353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
89, 71
               

               
Conread position:
               
1-182
               

               
Cow position:
               
chr27:2949550-2949379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
109, 25
               

               
Conread position:
               
1-183
               

               
Cow position:
               
chr27:21677664-21677474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
1-183
               

               
Cow position:
               
chr27:23941185-23940999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
1-183
               

               
Cow position:
               
chr27:26909822-26909641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
92, 58
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr27:11133854-11134037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
99, 72
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr27:12284760-12284945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
44, 74
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr27:27828090-27827900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
73, 182
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr27:29308109-29308294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
71, 153
               

               
Conread position:
               
1-186
               

               
Cow position:
               
chr27:232317-232506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
1-187
               

               
Cow position:
               
chr27:1184407-1184224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
99, 18
               

               
Conread position:
               
1-187
               

               
Cow position:
               
chr27:28254002-28254191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
71, 129
               

               
Conread position:
               
1-188
               

               
Cow position:
               
chr27:2325774-2325979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
1-188
               

               
Cow position:
               
chr27:18688646-18688455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
1-189
               

               
Cow position:
               
chr27:5539926-5539740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
95, 67
               

               
Conread position:
               
1-189
               

               
Cow position:
               
chr27:11323093-11323285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
1-189
               

               
Cow position:
               
chr27:13181670-13181866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
72, 25
               

               
Conread position:
               
1-189
               

               
Cow position:
               
chr27:18791748-18791554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
1-190
               

               
Cow position:
               
chr27:16246574-16246763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
99, 9
               

               
Conread position:
               
1-194
               

               
Cow position:
               
chr27:29614808-29615002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
79, 58
               

               
Conread position:
               
1-195
               

               
Cow position:
               
chr27:20591693-20591890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
71, 132
               

               
Conread position:
               
1-196
               

               
Cow position:
               
chr27:17102666-17102858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
99, 71
               

               
Conread position:
               
1-198
               

               
Cow position:
               
chr27:6330400-6330608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
1-198
               

               
Cow position:
               
chr27:19557159-19557349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
89, 12
               

               
Conread position:
               
1-201
               

               
Cow position:
               
chr27:3518268-3518473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
1-201
               

               
Cow position:
               
chr27:26245780-26245580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
72, 161
               

               
Conread position:
               
1-201
               

               
Cow position:
               
chr27:27648549-27648350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
92, 71
               

               
Conread position:
               
1-202
               

               
Cow position:
               
chr27:28232167-28231974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
72, 110
               

               
Conread position:
               
1-203
               

               
Cow position:
               
chr27:7425422-7425219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
85, 72
               

               
Conread position:
               
1-205
               

               
Cow position:
               
chr27:6106473-6106671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
84, 23
               

               
Conread position:
               
1-206
               

               
Cow position:
               
chr27:20612287-20612494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
71, 81
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr27:13204231-13204432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
99, 58
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chr27:18435364-18435155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
99, 71
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chr27:29319171-29319390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr27:24303709-24303926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
66, 23
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr27:26173264-26173478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
68, 132
               

               
Conread position:
               
1-216
               

               
Cow position:
               
chr27:10404351-10404134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
72, 164
               

               
Conread position:
               
1-216
               

               
Cow position:
               
chr27:23147930-23148148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
48, 19
               

               
Conread position:
               
1-216
               

               
Cow position:
               
chr27:26121524-26121742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr27:7343662-7343444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
113, 22
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr27:15003213-15002994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
72, 77
               

               
Conread position:
               
1-219
               

               
Cow position:
               
chr27:10598753-10598974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
1-219
               

               
Cow position:
               
chr27:22245407-22245611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
1-219
               

               
Cow position:
               
chr27:31169339-31169125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
109, 72
               

               
Conread position:
               
1-220
               

               
Cow position:
               
chr27:6241426-6241205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
99, 12
               

               
Conread position:
               
1-220
               

               
Cow position:
               
chr27:16512401-16512185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
93, 47
               

               
Conread position:
               
1-221
               

               
Cow position:
               
chr27:15926563-15926782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
71, 93
               

               
Conread position:
               
1-221
               

               
Cow position:
               
chr27:19607895-19607673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
71, 164
               

               
Conread position:
               
1-223
               

               
Cow position:
               
chr27:31170306-31170075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
72, 155
               

               
Conread position:
               
1-224
               

               
Cow position:
               
chr27:26565561-26565778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
91, 71
               

               
Conread position:
               
1-226
               

               
Cow position:
               
chr27:27740527-27740299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 127
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chr27:20719051-20719286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
1-233
               

               
Cow position:
               
chr27:30483538-30483298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
72, 95
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr27:23994649-23994414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
72, 122
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr27:30885004-30885236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
98, 67
               

               
Conread position:
               
1-243
               

               
Cow position:
               
chr27:24240118-24240360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
68, 22
               

               
Conread position:
               
1-245
               

               
Cow position:
               
chr27:15238507-15238752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
72, 9
               

               
Conread position:
               
1-248
               

               
Cow position:
               
chr27:20897254-20897011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
92, 61
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr27:5545346-5545595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
72, 77
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr27:20584701-20584444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 164
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr27:26437354-26437105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 69
               

               
Conread position:
               
1-251
               

               
Cow position:
               
chr27:12564662-12564408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr27:11982882-11982624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 132
               

               
Conread position:
               
1-259
               

               
Cow position:
               
chr27:31248840-31248594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
92, 67
               

               
Conread position:
               
1-272
               

               
Cow position:
               
chr27:14269564-14269306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
25, 101
               

               
Conread position:
               
1-273
               

               
Cow position:
               
chr27:23507415-23507687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
71, 209
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr27:18882423-18882695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
109, 23
               

               
Conread position:
               
1-281
               

               
Cow position:
               
chr27:23484982-23485258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
109, 25
               

               
Conread position:
               
1-282
               

               
Cow position:
               
chr27:2644332-2644045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
72, 227
               

               
Conread position:
               
1-293
               

               
Cow position:
               
chr27:29693233-29693524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
52, 223
               

               
Conread position:
               
1-303
               

               
Cow position:
               
chr27:26112152-26111842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr27:15865376-15865679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 66
               

               
Conread position:
               
1-309
               

               
Cow position:
               
chr27:6924848-6925162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
1-312
               

               
Cow position:
               
chr27:16088557-16088885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 233
               

               
Conread position:
               
1-316
               

               
Cow position:
               
chr27:28896644-28896957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 163
               

               
Conread position:
               
1-344
               

               
Cow position:
               
chr27:4858853-4858540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
1-345
               

               
Cow position:
               
chr27:18646383-18646040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
108, 71
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr27:11151437-11151787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 109
               

               
Conread position:
               
1-350
               

               
Cow position:
               
chr27:26226522-26226178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 69
               

               
Conread position:
               
1-358
               

               
Cow position:
               
chr27:29236324-29236697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
60, 23
               

               
Conread position:
               
1-360
               

               
Cow position:
               
chr27:21990909-21991275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 236
               

               
Conread position:
               
1-362
               

               
Cow position:
               
chr27:20749236-20748886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 72
               

               
Conread position:
               
1-367
               

               
Cow position:
               
chr27:19500470-19500103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 221
               

               
Conread position:
               
1-368
               

               
Cow position:
               
chr27:29185079-29184709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 231
               

               
Conread position:
               
1-369
               

               
Cow position:
               
chr27:16103577-16103936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 70
               

               
Conread position:
               
1-374
               

               
Cow position:
               
chr27:16965341-16965724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 56
               

               
Conread position:
               
1-385
               

               
Cow position:
               
chr27:29816863-29816477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 43
               

               
Conread position:
               
1-388
               

               
Cow position:
               
chr27:3306552-3306921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 54
               

               
Conread position:
               
1-390
               

               
Cow position:
               
chr27:7649825-7649433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 40
               

               
Conread position:
               
1-392
               

               
Cow position:
               
chr27:426736-427124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 71
               

               
Conread position:
               
1-393
               

               
Cow position:
               
chr27:14343669-14343315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
142, 33
               

               
Conread position:
               
1-394
               

               
Cow position:
               
chr27:7731508-7731095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 389
               

               
Conread position:
               
1-395
               

               
Cow position:
               
chr27:22513915-22513520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 221
               

               
Conread position:
               
1-396
               

               
Cow position:
               
chr27:11480872-11480474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 56
               

               
Conread position:
               
1-400
               

               
Cow position:
               
chr27:16780626-16781024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
58, 12
               

               
Conread position:
               
1-402
               

               
Cow position:
               
chr27:29431242-29431622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
91, 65
               

               
Conread position:
               
1-403
               

               
Cow position:
               
chr27:30872291-30871897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 52
               

               
Conread position:
               
1-404
               

               
Cow position:
               
chr27:4944740-4944365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
230, 71
               

               
Conread position:
               
1-404
               

               
Cow position:
               
chr27:27438742-27438341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 149
               

               
Conread position:
               
1-407
               

               
Cow position:
               
chr27:22614621-22615001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
72, 102
               

               
Conread position:
               
1-412
               

               
Cow position:
               
chr27:15409259-15408872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
1-413
               

               
Cow position:
               
chr27:19496645-19497047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 128
               

               
Conread position:
               
1-419
               

               
Cow position:
               
chr27:19546755-19546324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 155
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chr27:16705019-16705428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 59
               

               
Conread position:
               
1-427
               

               
Cow position:
               
chr27:18031304-18030870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 68
               

               
Conread position:
               
1-433
               

               
Cow position:
               
chr27:22547622-22547211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
375, 71
               

               
Conread position:
               
1-433
               

               
Cow position:
               
chr27:30914773-30915194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 166
               

               
Conread position:
               
1-440
               

               
Cow position:
               
chr27:27003492-27003081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 9
               

               
Conread position:
               
1-454
               

               
Cow position:
               
chr27:16872166-16871706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
26, 57
               

               
Conread position:
               
1-455
               

               
Cow position:
               
chr27:15669008-15668553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 247
               

               
Conread position:
               
1-464
               

               
Cow position:
               
chr27:27632827-27632386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 46
               

               
Conread position:
               
1-464
               

               
Cow position:
               
chr27:30374816-30374347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 231
               

               
Conread position:
               
1-464
               

               
Cow position:
               
chr27:30764799-30765255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 119
               

               
Conread position:
               
1-465
               

               
Cow position:
               
chr27:4390491-4390030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 25
               

               
Conread position:
               
1-465
               

               
Cow position:
               
chr27:28002037-28001599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 67
               

               
Conread position:
               
1-472
               

               
Cow position:
               
chr27:27389261-27388797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 218
               

               
Conread position:
               
1-472
               

               
Cow position:
               
chr27:30890067-30890517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
375, 58
               

               
Conread position:
               
1-473
               

               
Cow position:
               
chr27:10979626-10980096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 237
               

               
Conread position:
               
1-473
               

               
Cow position:
               
chr27:22220316-22220786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 75
               

               
Conread position:
               
1-478
               

               
Cow position:
               
chr27:29494132-29493677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
99, 48
               

               
Conread position:
               
1-481
               

               
Cow position:
               
chr27:26865342-26864877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
375, 69
               

               
Conread position:
               
1-489
               

               
Cow position:
               
chr27:23929744-23930215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 57
               

               
Conread position:
               
1-492
               

               
Cow position:
               
chr27:24331480-24331983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 185
               

               
Conread position:
               
1-494
               

               
Cow position:
               
chr27:15204470-15203975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 220
               

               
Conread position:
               
1-496
               

               
Cow position:
               
chr27:2957183-2957662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 72
               

               
Conread position:
               
1-497
               

               
Cow position:
               
chr27:31373206-31372721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 129
               

               
Conread position:
               
1-511
               

               
Cow position:
               
chr27:12515960-12516470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 41
               

               
Conread position:
               
1-530
               

               
Cow position:
               
chr27:28190425-28189922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 62
               

               
Conread position:
               
1-536
               

               
Cow position:
               
chr27:20283410-20283924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 59
               

               
Conread position:
               
1-545
               

               
Cow position:
               
chr27:18543754-18544308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 72
               

               
Conread position:
               
1-561
               

               
Cow position:
               
chr27:30868985-30868413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
581
               

               
Alignm identity:
               
445
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 229
               

               
Conread position:
               
1-575
               

               
Cow position:
               
chr27:8630107-8629533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
590
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 44
               

               
Conread position:
               
1-578
               

               
Cow position:
               
chr27:8962475-8961926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
588
               

               
Alignm identity:
               
432
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 25
               

               
Conread position:
               
1-578
               

               
Cow position:
               
chr27:22602941-22603506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
597
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 167
               

               
Conread position:
               
1-587
               

               
Cow position:
               
chr27:7212964-7212368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
615
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 300
               

               
Conread position:
               
1-587
               

               
Cow position:
               
chr27:26428362-26427775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
598
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 36
               

               
Conread position:
               
1-594
               

               
Cow position:
               
chr27:299608-299022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
608
               

               
Alignm identity:
               
432
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 45
               

               
Conread position:
               
1-602
               

               
Cow position:
               
chr27:22171068-22171666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
618
               

               
Alignm identity:
               
454
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 56
               

               
Conread position:
               
1-603
               

               
Cow position:
               
chr27:26434047-26433445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
618
               

               
Alignm identity:
               
425
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 232
               

               
Conread position:
               
1-607
               

               
Cow position:
               
chr27:15453979-15454584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
625
               

               
Alignm identity:
               
449
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 27
               

               
Conread position:
               
1-613
               

               
Cow position:
               
chr27:18558124-18558745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
630
               

               
Alignm identity:
               
473
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 153
               

               
Conread position:
               
1-613
               

               
Cow position:
               
chr27:22035605-22035000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
620
               

               
Alignm identity:
               
450
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
221, 71
               

               
Conread position:
               
1-618
               

               
Cow position:
               
chr27:14670614-14669997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
635
               

               
Alignm identity:
               
466
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 48
               

               
Conread position:
               
1-627
               

               
Cow position:
               
chr27:2901499-2900848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
661
               

               
Alignm identity:
               
470
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 36
               

               
Conread position:
               
1-627
               

               
Cow position:
               
chr27:8062585-8061972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
637
               

               
Alignm identity:
               
464
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 217
               

               
Conread position:
               
1-627
               

               
Cow position:
               
chr27:20828938-20828310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
645
               

               
Alignm identity:
               
447
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 22
               

               
Conread position:
               
1-628
               

               
Cow position:
               
chr27:16786597-16787227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
644
               

               
Alignm identity:
               
483
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 64
               

               
Conread position:
               
1-629
               

               
Cow position:
               
chr27:1637160-1636555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
644
               

               
Alignm identity:
               
463
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 60
               

               
Conread position:
               
1-629
               

               
Cow position:
               
chr27:11435561-11434936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
644
               

               
Alignm identity:
               
495
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 220
               

               
Conread position:
               
1-629
               

               
Cow position:
               
chr27:13875499-13876121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
640
               

               
Alignm identity:
               
489
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 138
               

               
Conread position:
               
1-629
               

               
Cow position:
               
chr27:17472580-17473215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
656
               

               
Alignm identity:
               
474
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 37
               

               
Conread position:
               
1-629
               

               
Cow position:
               
chr27:19387787-19388421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
651
               

               
Alignm identity:
               
464
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 25
               

               
Conread position:
               
1-629
               

               
Cow position:
               
chr27:20637292-20636681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
642
               

               
Alignm identity:
               
465
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 83
               

               
Conread position:
               
1-629
               

               
Cow position:
               
chr27:21978377-21977742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
647
               

               
Alignm identity:
               
475
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 226
               

               
Conread position:
               
1-629
               

               
Cow position:
               
chr27:22439903-22440537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
647
               

               
Alignm identity:
               
482
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 103
               

               
Conread position:
               
1-629
               

               
Cow position:
               
chr27:22550004-22549395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
645
               

               
Alignm identity:
               
464
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 54
               

               
Conread position:
               
1-629
               

               
Cow position:
               
chr27:25809750-25809128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
649
               

               
Alignm identity:
               
478
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 25
               

               
Conread position:
               
1-629
               

               
Cow position:
               
chr27:26224490-26223866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
646
               

               
Alignm identity:
               
455
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 44
               

               
Conread position:
               
1-629
               

               
Cow position:
               
chr27:27020329-27019708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
640
               

               
Alignm identity:
               
480
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 33
               

               
Conread position:
               
1-629
               

               
Cow position:
               
chr27:27856105-27856737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
651
               

               
Alignm identity:
               
425
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 16
               

               
Conread position:
               
1-629
               

               
Cow position:
               
chr27:28018089-28018730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
655
               

               
Alignm identity:
               
469
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 50
               

               
Conread position:
               
2-134
               

               
Cow position:
               
chr27:30441469-30441605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
70, 32
               

               
Conread position:
               
2-152
               

               
Cow position:
               
chr27:178630-178781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
79, 71
               

               
Conread position:
               
2-155
               

               
Cow position:
               
chr27:19805929-19805775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
71, 112
               

               
Conread position:
               
2-160
               

               
Cow position:
               
chr27:11145649-11145805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
109, 70
               

               
Conread position:
               
2-161
               

               
Cow position:
               
chr27:28476341-28476186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
98, 9
               

               
Conread position:
               
2-163
               

               
Cow position:
               
chr27:26317833-26317996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
70, 22
               

               
Conread position:
               
2-173
               

               
Cow position:
               
chr27:11454405-11454230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
2-183
               

               
Cow position:
               
chr27:11507497-11507314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
70, 80
               

               
Conread position:
               
2-194
               

               
Cow position:
               
chr27:19576556-19576363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
14, 72
               

               
Conread position:
               
2-213
               

               
Cow position:
               
chr27:24007232-24007448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
2-222
               

               
Cow position:
               
chr27:9338218-9337989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
71, 131
               

               
Conread position:
               
2-239
               

               
Cow position:
               
chr27:27058638-27058403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
70, 185
               

               
Conread position:
               
2-249
               

               
Cow position:
               
chr27:12658586-12658333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
71, 211
               

               
Conread position:
               
2-251
               

               
Cow position:
               
chr27:19508779-19509030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
98, 70
               

               
Conread position:
               
2-279
               

               
Cow position:
               
chr27:29593861-29593585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 21
               

               
Conread position:
               
2-312
               

               
Cow position:
               
chr27:13869387-13869695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
69, 219
               

               
Conread position:
               
2-332
               

               
Cow position:
               
chr27:23510742-23511084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 98
               

               
Conread position:
               
2-356
               

               
Cow position:
               
chr27:20078632-20078985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 167
               

               
Conread position:
               
2-360
               

               
Cow position:
               
chr27:16275913-16275552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 85
               

               
Conread position:
               
2-402
               

               
Cow position:
               
chr27:19669038-19668627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 112
               

               
Conread position:
               
2-462
               

               
Cow position:
               
chr27:2592304-2592762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 319
               

               
Conread position:
               
2-465
               

               
Cow position:
               
chr27:13639220-13638768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 221
               

               
Conread position:
               
2-473
               

               
Cow position:
               
chr27:16284256-16284705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 53
               

               
Conread position:
               
2-496
               

               
Cow position:
               
chr27:7412161-7412641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 71
               

               
Conread position:
               
2-509
               

               
Cow position:
               
chr27:18507412-18507901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 221
               

               
Conread position:
               
2-520
               

               
Cow position:
               
chr27:7971328-7971855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 137
               

               
Conread position:
               
2-522
               

               
Cow position:
               
chr27:28922128-28921620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 148
               

               
Conread position:
               
2-615
               

               
Cow position:
               
chr27:29831941-29831319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
642
               

               
Alignm identity:
               
482
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 231
               

               
Conread position:
               
2-629
               

               
Cow position:
               
chr27:15315290-15315884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
639
               

               
Alignm identity:
               
464
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 23
               

               
Conread position:
               
3-150
               

               
Cow position:
               
chr27:18813776-18813623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
3-151
               

               
Cow position:
               
chr27:19074255-19074105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
3-154
               

               
Cow position:
               
chr27:10581302-10581453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
90, 69
               

               
Conread position:
               
3-154
               

               
Cow position:
               
chr27:22583511-22583667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
3-160
               

               
Cow position:
               
chr27:31183340-31183502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
70, 7
               

               
Conread position:
               
3-162
               

               
Cow position:
               
chr27:22748096-22748256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
77, 65
               

               
Conread position:
               
3-165
               

               
Cow position:
               
chr27:23232680-23232847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
3-165
               

               
Cow position:
               
chr27:23477716-23477877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
97, 70
               

               
Conread position:
               
3-166
               

               
Cow position:
               
chr27:1810320-1810154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
3-171
               

               
Cow position:
               
chr27:11464665-11464493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
3-173
               

               
Cow position:
               
chr27:9956666-9956492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
3-175
               

               
Cow position:
               
chr27:26314357-26314182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
3-182
               

               
Cow position:
               
chr27:11349053-11349224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
91, 23
               

               
Conread position:
               
3-185
               

               
Cow position:
               
chr27:20484501-20484681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
90, 56
               

               
Conread position:
               
3-185
               

               
Cow position:
               
chr27:22792607-22792783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
108, 65
               

               
Conread position:
               
3-185
               

               
Cow position:
               
chr27:31498551-31498730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
70, 21
               

               
Conread position:
               
3-187
               

               
Cow position:
               
chr27:26118265-26118453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
63, 71
               

               
Conread position:
               
3-189
               

               
Cow position:
               
chr27:4487012-4486821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
70, 172
               

               
Conread position:
               
3-190
               

               
Cow position:
               
chr27:25790071-25790248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
89, 16
               

               
Conread position:
               
3-197
               

               
Cow position:
               
chr27:24223723-24223915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
78, 16
               

               
Conread position:
               
3-198
               

               
Cow position:
               
chr27:24693186-24693377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
97, 69
               

               
Conread position:
               
3-199
               

               
Cow position:
               
chr27:20327265-20327466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
3-201
               

               
Cow position:
               
chr27:19452767-19452969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
3-201
               

               
Cow position:
               
chr27:23527083-23527280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
56, 105
               

               
Conread position:
               
3-201
               

               
Cow position:
               
chr27:26323210-26323415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
59, 189
               

               
Conread position:
               
3-210
               

               
Cow position:
               
chr27:15237579-15237788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
69, 191
               

               
Conread position:
               
3-217
               

               
Cow position:
               
chr27:29388440-29388654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
98, 70
               

               
Conread position:
               
3-219
               

               
Cow position:
               
chr27:29991691-29991462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
3-221
               

               
Cow position:
               
chr27:31386862-31386643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
97, 68
               

               
Conread position:
               
3-228
               

               
Cow position:
               
chr27:14817998-14818228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr27:19681717-19681951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
3-243
               

               
Cow position:
               
chr27:17933691-17933936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
69, 227
               

               
Conread position:
               
3-247
               

               
Cow position:
               
chr27:31210318-31210559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
107, 70
               

               
Conread position:
               
3-251
               

               
Cow position:
               
chr27:23560261-23560015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
98, 70
               

               
Conread position:
               
3-251
               

               
Cow position:
               
chr27:27558737-27558483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
70, 134
               

               
Conread position:
               
3-255
               

               
Cow position:
               
chr27:11561543-11561795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 14
               

               
Conread position:
               
3-256
               

               
Cow position:
               
chr27:12459056-12459305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
98, 68
               

               
Conread position:
               
3-265
               

               
Cow position:
               
chr27:25151857-25152112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
67, 122
               

               
Conread position:
               
3-268
               

               
Cow position:
               
chr27:26794016-26793756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
70, 94
               

               
Conread position:
               
3-275
               

               
Cow position:
               
chr27:212719-213003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
70, 183
               

               
Conread position:
               
3-300
               

               
Cow position:
               
chr27:27405301-27405005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
70, 152
               

               
Conread position:
               
3-307
               

               
Cow position:
               
chr27:15240829-15241133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
70, 14
               

               
Conread position:
               
3-310
               

               
Cow position:
               
chr27:23582642-23582938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
40, 75
               

               
Conread position:
               
3-320
               

               
Cow position:
               
chr27:15378713-15378396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
70, 20
               

               
Conread position:
               
3-332
               

               
Cow position:
               
chr27:22560058-22559727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 45
               

               
Conread position:
               
3-332
               

               
Cow position:
               
chr27:23735737-23736056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
87, 45
               

               
Conread position:
               
3-340
               

               
Cow position:
               
chr27:22386656-22386972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
3-340
               

               
Cow position:
               
chr27:23594087-23594418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
70, 144
               

               
Conread position:
               
3-352
               

               
Cow position:
               
chr27:20045664-20046000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 21
               

               
Conread position:
               
3-354
               

               
Cow position:
               
chr27:20101135-20101484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
70, 231
               

               
Conread position:
               
3-357
               

               
Cow position:
               
chr27:27442392-27442051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 69
               

               
Conread position:
               
3-446
               

               
Cow position:
               
chr27:20354368-20354785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 70
               

               
Conread position:
               
3-464
               

               
Cow position:
               
chr27:10307535-10307072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 152
               

               
Conread position:
               
3-464
               

               
Cow position:
               
chr27:12596550-12596980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 66
               

               
Conread position:
               
3-465
               

               
Cow position:
               
chr27:23918266-23917833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
36, 71
               

               
Conread position:
               
3-495
               

               
Cow position:
               
chr27:26509388-26508904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 124
               

               
Conread position:
               
3-496
               

               
Cow position:
               
chr27:6550227-6550709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 23
               

               
Conread position:
               
3-516
               

               
Cow position:
               
chr27:11815979-11815483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 9
               

               
Conread position:
               
3-518
               

               
Cow position:
               
chr27:13842971-13843487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 24
               

               
Conread position:
               
3-523
               

               
Cow position:
               
chr27:6499826-6500343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 218
               

               
Conread position:
               
3-527
               

               
Cow position:
               
chr27:28932034-28931496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 76
               

               
Conread position:
               
3-535
               

               
Cow position:
               
chr27:20869914-20869387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 67
               

               
Conread position:
               
3-569
               

               
Cow position:
               
chr27:28206572-28207127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 66
               

               
Conread position:
               
3-581
               

               
Cow position:
               
chr27:24228036-24227446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
604
               

               
Alignm identity:
               
455
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 224
               

               
Conread position:
               
3-616
               

               
Cow position:
               
chr27:17397683-17397072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
625
               

               
Alignm identity:
               
464
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 70
               

               
Conread position:
               
3-618
               

               
Cow position:
               
chr27:7959063-7958452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
633
               

               
Alignm identity:
               
462
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 98
               

               
Conread position:
               
3-618
               

               
Cow position:
               
chr27:21393725-21393123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
631
               

               
Alignm identity:
               
462
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 55
               

               
Conread position:
               
3-627
               

               
Cow position:
               
chr27:22330890-22330260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
655
               

               
Alignm identity:
               
448
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 59
               

               
Conread position:
               
3-628
               

               
Cow position:
               
chr27:23452231-23452874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
656
               

               
Alignm identity:
               
463
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 65
               

               
Conread position:
               
3-628
               

               
Cow position:
               
chr27:26999655-26999021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
650
               

               
Alignm identity:
               
444
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 84
               

               
Conread position:
               
3-629
               

               
Cow position:
               
chr27:15867161-15867782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
644
               

               
Alignm identity:
               
497
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 66
               

               
Conread position:
               
4-139
               

               
Cow position:
               
chr27:22150924-22150789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
96, 69
               

               
Conread position:
               
4-166
               

               
Cow position:
               
chr27:23177543-23177380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
75, 64
               

               
Conread position:
               
4-173
               

               
Cow position:
               
chr27:30997060-30996889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
69, 34
               

               
Conread position:
               
4-175
               

               
Cow position:
               
chr27:14472408-14472242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
69, 125
               

               
Conread position:
               
4-177
               

               
Cow position:
               
chr27:13236671-13236491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
4-246
               

               
Cow position:
               
chr27:30266851-30267097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
68, 210
               

               
Conread position:
               
4-250
               

               
Cow position:
               
chr27:19932835-19933079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
68, 185
               

               
Conread position:
               
4-263
               

               
Cow position:
               
chr27:22553108-22552855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
97, 9
               

               
Conread position:
               
4-301
               

               
Cow position:
               
chr27:22489041-22489343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
59, 236
               

               
Conread position:
               
4-390
               

               
Cow position:
               
chr27:26490136-26489752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 65
               

               
Conread position:
               
4-395
               

               
Cow position:
               
chr27:22735825-22735447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 208
               

               
Conread position:
               
4-464
               

               
Cow position:
               
chr27:19660697-19661166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 381
               

               
Conread position:
               
4-468
               

               
Cow position:
               
chr27:23554560-23554096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 135
               

               
Conread position:
               
4-516
               

               
Cow position:
               
chr27:28518062-28518558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 215
               

               
Conread position:
               
4-535
               

               
Cow position:
               
chr27:26424807-26424289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 68
               

               
Conread position:
               
4-578
               

               
Cow position:
               
chr27:435001-435586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
597
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 80
               

               
Conread position:
               
4-614
               

               
Cow position:
               
chr27:29798721-29799314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
623
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 148
               

               
Conread position:
               
4-629
               

               
Cow position:
               
chr27:15870928-15871556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
645
               

               
Alignm identity:
               
456
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 222
               

               
Conread position:
               
5-151
               

               
Cow position:
               
chr27:19779647-19779794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
88, 12
               

               
Conread position:
               
5-182
               

               
Cow position:
               
chr27:29526731-29526910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
19, 149
               

               
Conread position:
               
5-186
               

               
Cow position:
               
chr27:28015965-28015783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
67, 156
               

               
Conread position:
               
5-189
               

               
Cow position:
               
chr27:4414046-4413863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
88, 63
               

               
Conread position:
               
5-220
               

               
Cow position:
               
chr27:6319693-6319905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
95, 71
               

               
Conread position:
               
5-220
               

               
Cow position:
               
chr27:30455763-30455980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
68, 50
               

               
Conread position:
               
5-221
               

               
Cow position:
               
chr27:8790972-8790755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
96, 42
               

               
Conread position:
               
5-245
               

               
Cow position:
               
chr27:10323614-10323846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 44
               

               
Conread position:
               
5-273
               

               
Cow position:
               
chr27:12425058-12425325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
73, 162
               

               
Conread position:
               
5-281
               

               
Cow position:
               
chr27:26852812-26852547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
69, 140
               

               
Conread position:
               
5-284
               

               
Cow position:
               
chr27:23863347-23863637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
25, 172
               

               
Conread position:
               
5-301
               

               
Cow position:
               
chr27:28279948-28280248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
68, 127
               

               
Conread position:
               
5-316
               

               
Cow position:
               
chr27:590999-590687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
63, 256
               

               
Conread position:
               
5-331
               

               
Cow position:
               
chr27:26188597-26188915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 155
               

               
Conread position:
               
5-352
               

               
Cow position:
               
chr27:17995176-17994828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 218
               

               
Conread position:
               
5-382
               

               
Cow position:
               
chr27:17331262-17331644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 113
               

               
Conread position:
               
5-495
               

               
Cow position:
               
chr27:31147933-31147415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 22
               

               
Conread position:
               
5-629
               

               
Cow position:
               
chr27:1353350-1353992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
653
               

               
Alignm identity:
               
482
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 366
               

               
Conread position:
               
5-629
               

               
Cow position:
               
chr27:13318207-13317570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
648
               

               
Alignm identity:
               
482
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 323
               

               
Conread position:
               
5-629
               

               
Cow position:
               
chr27:23128235-23128847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
638
               

               
Alignm identity:
               
470
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 112
               

               
Conread position:
               
6-187
               

               
Cow position:
               
chr27:26236099-26236279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
67, 114
               

               
Conread position:
               
6-196
               

               
Cow position:
               
chr27:26400946-26400759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
89, 51
               

               
Conread position:
               
6-209
               

               
Cow position:
               
chr27:24731267-24731064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
66, 121
               

               
Conread position:
               
6-278
               

               
Cow position:
               
chr27:10653453-10653728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
58, 42
               

               
Conread position:
               
6-280
               

               
Cow position:
               
chr27:1190705-1190431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
66, 201
               

               
Conread position:
               
6-314
               

               
Cow position:
               
chr27:23108131-23107820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
73, 66
               

               
Conread position:
               
6-348
               

               
Cow position:
               
chr27:27695004-27694662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
56, 156
               

               
Conread position:
               
6-440
               

               
Cow position:
               
chr27:19685939-19685514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 26
               

               
Conread position:
               
6-440
               

               
Cow position:
               
chr27:29086345-29085915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
67, 126
               

               
Conread position:
               
6-627
               

               
Cow position:
               
chr27:21669341-21668748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
627
               

               
Alignm identity:
               
437
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 68
               

               
Conread position:
               
6-629
               

               
Cow position:
               
chr27:15925114-15925730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
639
               

               
Alignm identity:
               
472
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 11
               

               
Conread position:
               
7-430
               

               
Cow position:
               
chr27:27554908-27554497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 68
               

               
Conread position:
               
8-516
               

               
Cow position:
               
chr27:7935385-7934883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 65
               

               
Conread position:
               
9-173
               

               
Cow position:
               
chr27:23060342-23060174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
10-177
               

               
Cow position:
               
chr27:14701867-14701696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
10-189
               

               
Cow position:
               
chr27:24755766-24755943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
87, 58
               

               
Conread position:
               
10-215
               

               
Cow position:
               
chr27:12710017-12710230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
53, 11
               

               
Conread position:
               
10-402
               

               
Cow position:
               
chr27:23890708-23891100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 222
               

               
Conread position:
               
10-432
               

               
Cow position:
               
chr27:18739149-18739579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 211
               

               
Conread position:
               
10-454
               

               
Cow position:
               
chr27:22455018-22454565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 221
               

               
Conread position:
               
10-490
               

               
Cow position:
               
chr27:2930816-2930344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 208
               

               
Conread position:
               
13-164
               

               
Cow position:
               
chr27:26175888-26175738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
94, 27
               

               
Conread position:
               
13-182
               

               
Cow position:
               
chr27:24356812-24356986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
13-185
               

               
Cow position:
               
chr27:22267998-22268176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
53, 148
               

               
Conread position:
               
13-187
               

               
Cow position:
               
chr27:29892500-29892680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
66, 58
               

               
Conread position:
               
13-288
               

               
Cow position:
               
chr27:23859941-23860221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 156
               

               
Conread position:
               
13-293
               

               
Cow position:
               
chr27:31151161-31151434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
96, 59
               

               
Conread position:
               
13-620
               

               
Cow position:
               
chr27:10582148-10582749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
623
               

               
Alignm identity:
               
453
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 16
               

               
Conread position:
               
14-220
               

               
Cow position:
               
chr27:24709333-24709538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
59, 174
               

               
Conread position:
               
14-248
               

               
Cow position:
               
chr27:28478363-28478594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
87, 52
               

               
Conread position:
               
14-454
               

               
Cow position:
               
chr27:26238803-26239237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 73
               

               
Conread position:
               
14-461
               

               
Cow position:
               
chr27:20368811-20369259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 102
               

               
Conread position:
               
15-169
               

               
Cow position:
               
chr27:17908481-17908324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
57, 112
               

               
Conread position:
               
15-281
               

               
Cow position:
               
chr27:29613711-29613442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
57, 206
               

               
Conread position:
               
15-526
               

               
Cow position:
               
chr27:6541415-6541909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 58
               

               
Conread position:
               
15-538
               

               
Cow position:
               
chr27:11536327-11535795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 71
               

               
Conread position:
               
15-614
               

               
Cow position:
               
chr27:22427055-22426449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
616
               

               
Alignm identity:
               
436
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 201
               

               
Conread position:
               
16-251
               

               
Cow position:
               
chr27:2886053-2885817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
56, 7
               

               
Conread position:
               
17-220
               

               
Cow position:
               
chr27:19485653-19485859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
55, 204
               

               
Conread position:
               
17-268
               

               
Cow position:
               
chr27:6290253-6290504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
56, 198
               

               
Conread position:
               
17-412
               

               
Cow position:
               
chr27:25428129-25427737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
56, 205
               

               
Conread position:
               
19-150
               

               
Cow position:
               
chr27:22236906-22237040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
54, 114
               

               
Conread position:
               
19-275
               

               
Cow position:
               
chr27:17646373-17646128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
20-629
               

               
Cow position:
               
chr27:21408781-21408156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
630
               

               
Alignm identity:
               
447
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 430
               

               
Conread position:
               
21-173
               

               
Cow position:
               
chr27:18912735-18912584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
60, 47
               

               
Conread position:
               
21-402
               

               
Cow position:
               
chr27:19896549-19896918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 47
               

               
Conread position:
               
22-184
               

               
Cow position:
               
chr27:14005203-14005359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
70, 46
               

               
Conread position:
               
22-343
               

               
Cow position:
               
chr27:26087104-26087401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
79, 51
               

               
Conread position:
               
22-434
               

               
Cow position:
               
chr27:13251811-13252203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 47
               

               
Conread position:
               
22-629
               

               
Cow position:
               
chr27:30582524-30583139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
628
               

               
Alignm identity:
               
438
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 51
               

               
Conread position:
               
23-220
               

               
Cow position:
               
chr27:20501620-20501827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
55, 50
               

               
Conread position:
               
23-303
               

               
Cow position:
               
chr27:20514608-20514888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 138
               

               
Conread position:
               
24-628
               

               
Cow position:
               
chr27:1768833-1768240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
621
               

               
Alignm identity:
               
461
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 35
               

               
Conread position:
               
26-614
               

               
Cow position:
               
chr27:26807768-26807180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
605
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 50
               

               
Conread position:
               
29-578
               

               
Cow position:
               
chr27:23632394-23632940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 44
               

               
Conread position:
               
30-173
               

               
Cow position:
               
chr27:18491353-18491495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
84, 42
               

               
Conread position:
               
30-192
               

               
Cow position:
               
chr27:24726236-24726068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
30-251
               

               
Cow position:
               
chr27:15825928-15825709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
43, 168
               

               
Conread position:
               
34-627
               

               
Cow position:
               
chr27:22418965-22418374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
606
               

               
Alignm identity:
               
447
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 41
               

               
Conread position:
               
37-249
               

               
Cow position:
               
chr27:24022941-24023155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
17, 21
               

               
Conread position:
               
37-271
               

               
Cow position:
               
chr27:14303542-14303769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
64, 34
               

               
Conread position:
               
37-353
               

               
Cow position:
               
chr27:30261093-30260780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 196
               

               
Conread position:
               
37-618
               

               
Cow position:
               
chr27:15866021-15866605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
600
               

               
Alignm identity:
               
455
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 49
               

               
Conread position:
               
39-173
               

               
Cow position:
               
chr27:669876-670012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
51, 33
               

               
Conread position:
               
40-188
               

               
Cow position:
               
chr27:27747663-27747511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
43-294
               

               
Cow position:
               
chr27:28260726-28260481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
55, 30
               

               
Conread position:
               
45-302
               

               
Cow position:
               
chr27:7973984-7974240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 146
               

               
Conread position:
               
46-440
               

               
Cow position:
               
chr27:20552973-20552569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 256
               

               
Conread position:
               
47-523
               

               
Cow position:
               
chr27:26920103-26919625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 235
               

               
Conread position:
               
48-461
               

               
Cow position:
               
chr27:26218522-26218915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 41
               

               
Conread position:
               
50-393
               

               
Cow position:
               
chr27:28271338-28270994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 171
               

               
Conread position:
               
53-395
               

               
Cow position:
               
chr27:22423332-22423649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
20, 33
               

               
Conread position:
               
54-256
               

               
Cow position:
               
chr27:29841915-29841711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
42, 167
               

               
Conread position:
               
55-367
               

               
Cow position:
               
chr27:8168613-8168300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 172
               

               
Conread position:
               
55-627
               

               
Cow position:
               
chr27:27064620-27064052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
582
               

               
Alignm identity:
               
441
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 18
               

               
Conread position:
               
56-278
               

               
Cow position:
               
chr27:17918493-17918273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
44, 17
               

               
Conread position:
               
56-347
               

               
Cow position:
               
chr27:29380673-29380967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 112
               

               
Conread position:
               
57-213
               

               
Cow position:
               
chr27:14957906-14957750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
16, 40
               

               
Conread position:
               
57-222
               

               
Cow position:
               
chr27:26090493-26090323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
57-281
               

               
Cow position:
               
chr27:20803839-20803612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
16, 29
               

               
Conread position:
               
57-627
               

               
Cow position:
               
chr27:27050090-27049525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 75
               

               
Conread position:
               
58-182
               

               
Cow position:
               
chr27:29658894-29658767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
58-219
               

               
Cow position:
               
chr27:13917254-13917424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
58-221
               

               
Cow position:
               
chr27:28290685-28290842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
15, 102
               

               
Conread position:
               
58-223
               

               
Cow position:
               
chr27:30908492-30908662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
15, 76
               

               
Conread position:
               
58-294
               

               
Cow position:
               
chr27:4155820-4156060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
36, 57
               

               
Conread position:
               
58-296
               

               
Cow position:
               
chr27:6302647-6302403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
15, 82
               

               
Conread position:
               
58-302
               

               
Cow position:
               
chr27:31018005-31017768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
15, 129
               

               
Conread position:
               
58-303
               

               
Cow position:
               
chr27:20085379-20085631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
57, 15
               

               
Conread position:
               
58-388
               

               
Cow position:
               
chr27:28467628-28467291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 55
               

               
Conread position:
               
58-408
               

               
Cow position:
               
chr27:15642995-15643343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 75
               

               
Conread position:
               
58-445
               

               
Cow position:
               
chr27:30988618-30989002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 98
               

               
Conread position:
               
58-452
               

               
Cow position:
               
chr27:30359227-30359606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 172
               

               
Conread position:
               
58-517
               

               
Cow position:
               
chr27:22723874-22723431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 154
               

               
Conread position:
               
58-618
               

               
Cow position:
               
chr27:25783449-25783968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 5
               

               
Conread position:
               
58-628
               

               
Cow position:
               
chr27:536286-536850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
585
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 31
               

               
Conread position:
               
59-249
               

               
Cow position:
               
chr27:1789315-1789123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 14
               

               
Conread position:
               
59-263
               

               
Cow position:
               
chr27:15343456-15343253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
15, 100
               

               
Conread position:
               
59-401
               

               
Cow position:
               
chr27:27270720-27270377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 27
               

               
Conread position:
               
59-416
               

               
Cow position:
               
chr27:23877023-23876639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
14, 51
               

               
Conread position:
               
59-458
               

               
Cow position:
               
chr27:27641189-27640775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 82
               

               
Conread position:
               
59-559
               

               
Cow position:
               
chr27:4386236-4385743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 14
               

               
Conread position:
               
61-256
               

               
Cow position:
               
chr27:18923007-18922811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
35, 15
               

               
Conread position:
               
61-344
               

               
Cow position:
               
chr27:12191657-12191383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
8, 146
               

               
Conread position:
               
61-546
               

               
Cow position:
               
chr27:29207633-29208107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 12
               

               
Conread position:
               
61-629
               

               
Cow position:
               
chr27:8942865-8942297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
584
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 6
               

               
Conread position:
               
62-303
               

               
Cow position:
               
chr27:22225767-22225528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
7, 15
               

               
Conread position:
               
62-349
               

               
Cow position:
               
chr27:31148588-31148871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
53, 11
               

               
Conread position:
               
62-448
               

               
Cow position:
               
chr27:25276970-25277342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 9
               

               
Conread position:
               
62-488
               

               
Cow position:
               
chr27:1291022-1290618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 11
               

               
Conread position:
               
63-309
               

               
Cow position:
               
chr27:15215054-15215306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
34, 10
               

               
Conread position:
               
63-602
               

               
Cow position:
               
chr27:27684287-27683747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 49
               

               
Conread position:
               
64-226
               

               
Cow position:
               
chr27:23895251-23895411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
9, 106
               

               
Conread position:
               
64-350
               

               
Cow position:
               
chr27:24371071-24371347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
37, 9
               

               
Conread position:
               
64-352
               

               
Cow position:
               
chr27:23545504-23545206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 187
               

               
Conread position:
               
65-293
               

               
Cow position:
               
chr27:1558819-1558601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
8, 21
               

               
Conread position:
               
68-629
               

               
Cow position:
               
chr27:4672842-4673410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
577
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 243
               

               
Conread position:
               
69-629
               

               
Cow position:
               
chr27:30177718-30177180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 5
               

               
Conread position:
               
72-322
               

               
Cow position:
               
chr27:26347776-26347534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
23, 41
               

               
Conread position:
               
72-332
               

               
Cow position:
               
chr27:24939723-24940004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
72-447
               

               
Cow position:
               
chr27:19648108-19647738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 113
               

               
Conread position:
               
72-577
               

               
Cow position:
               
chr27:12246490-12246988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 8
               

               
Conread position:
               
73-564
               

               
Cow position:
               
chr27:27039001-27038511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 84
               

               
Conread position:
               
75-332
               

               
Cow position:
               
chr27:8263500-8263240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 146
               

               
Conread position:
               
75-431
               

               
Cow position:
               
chr27:911256-910895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 52
               

               
Conread position:
               
75-456
               

               
Cow position:
               
chr27:21453256-21452855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 389
               

               
Conread position:
               
76-282
               

               
Cow position:
               
chr27:26132597-26132800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
35, 83
               

               
Conread position:
               
76-358
               

               
Cow position:
               
chr27:20901400-20901682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
25, 155
               

               
Conread position:
               
76-462
               

               
Cow position:
               
chr27:24546792-24546422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
39, 54
               

               
Conread position:
               
76-628
               

               
Cow position:
               
chr27:8430599-8430027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
585
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 95
               

               
Conread position:
               
76-629
               

               
Cow position:
               
chr27:26413415-26412879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 146
               

               
Conread position:
               
76-629
               

               
Cow position:
               
chr27:26786149-26785587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 152
               

               
Conread position:
               
77-340
               

               
Cow position:
               
chr27:29504807-29504545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
35, 15
               

               
Conread position:
               
77-533
               

               
Cow position:
               
chr27:23882527-23882067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 79
               

               
Conread position:
               
80-267
               

               
Cow position:
               
chr27:29149429-29149254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
16, 79
               

               
Conread position:
               
80-313
               

               
Cow position:
               
chr27:19083873-19083640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
27, 52
               

               
Conread position:
               
80-358
               

               
Cow position:
               
chr27:30389454-30389176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 52
               

               
Conread position:
               
80-414
               

               
Cow position:
               
chr27:14937586-14937255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
26, 52
               

               
Conread position:
               
80-473
               

               
Cow position:
               
chr27:26441204-26440826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 52
               

               
Conread position:
               
81-284
               

               
Cow position:
               
chr27:2034353-2034564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
15, 47
               

               
Conread position:
               
81-340
               

               
Cow position:
               
chr27:26134996-26135239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
15, 29
               

               
Conread position:
               
82-352
               

               
Cow position:
               
chr27:28245648-28245915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
19, 138
               

               
Conread position:
               
83-414
               

               
Cow position:
               
chr27:9169792-9169471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
292, 69
               

               
Conread position:
               
83-627
               

               
Cow position:
               
chr27:10992203-10992760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 77
               

               
Conread position:
               
88-629
               

               
Cow position:
               
chr27:1122883-1123417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 78
               

               
Conread position:
               
89-340
               

               
Cow position:
               
chr27:20497058-20497316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
89-430
               

               
Cow position:
               
chr27:18593125-18593460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 71
               

               
Conread position:
               
90-464
               

               
Cow position:
               
chr27:19577527-19577897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
9, 46
               

               
Conread position:
               
90-488
               

               
Cow position:
               
chr27:24014886-24014491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 150
               

               
Conread position:
               
91-460
               

               
Cow position:
               
chr27:30354489-30354126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 130
               

               
Conread position:
               
92-381
               

               
Cow position:
               
chr27:715357-715644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 101
               

               
Conread position:
               
92-418
               

               
Cow position:
               
chr27:3762-4065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
284, 11
               

               
Conread position:
               
99-618
               

               
Cow position:
               
chr27:1058812-1058292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 71
               

               
Conread position:
               
103-406
               

               
Cow position:
               
chr27:23662722-23662439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
91, 7
               

               
Conread position:
               
105-415
               

               
Cow position:
               
chr27:6159850-6160156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
10, 99
               

               
Conread position:
               
110-371
               

               
Cow position:
               
chr27:16625776-16626028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
110-448
               

               
Cow position:
               
chr27:1498192-1498521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
314, 63
               

               
Conread position:
               
110-495
               

               
Cow position:
               
chr27:29399702-29400073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
266, 47
               

               
Conread position:
               
110-499
               

               
Cow position:
               
chr27:27844126-27843732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 193
               

               
Conread position:
               
112-433
               

               
Cow position:
               
chr27:11296148-11296450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
263, 137
               

               
Conread position:
               
113-454
               

               
Cow position:
               
chr27:706832-707160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 45
               

               
Conread position:
               
114-301
               

               
Cow position:
               
chr27:20056091-20055905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
11, 106
               

               
Conread position:
               
116-216
               

               
Cow position:
               
chr27:20590582-20590483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
101
               

               
Alignm identity:
               
83
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
116-352
               

               
Cow position:
               
chr27:30672676-30672449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
117-293
               

               
Cow position:
               
chr27:21975936-21976106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
117-381
               

               
Cow position:
               
chr27:20247921-20247660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
197, 58
               

               
Conread position:
               
117-483
               

               
Cow position:
               
chr27:11081084-11081441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 103
               

               
Conread position:
               
118-266
               

               
Cow position:
               
chr27:28472664-28472813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
65, 57
               

               
Conread position:
               
121-627
               

               
Cow position:
               
chr27:25379875-25380388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 192
               

               
Conread position:
               
123-629
               

               
Cow position:
               
chr27:2390181-2390689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 86
               

               
Conread position:
               
125-265
               

               
Cow position:
               
chr27:30829535-30829674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
126-508
               

               
Cow position:
               
chr27:12429299-12429685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 87
               

               
Conread position:
               
126-629
               

               
Cow position:
               
chr27:9090898-9090400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
250, 37
               

               
Conread position:
               
129-629
               

               
Cow position:
               
chr27:24999846-24999341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 89
               

               
Conread position:
               
133-629
               

               
Cow position:
               
chr27:26857285-26856816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 76
               

               
Conread position:
               
144-454
               

               
Cow position:
               
chr27:2683235-2682930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
231, 82
               

               
Conread position:
               
147-627
               

               
Cow position:
               
chr27:732488-732956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 29
               

               
Conread position:
               
153-571
               

               
Cow position:
               
chr27:23070440-23070026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
222, 70
               

               
Conread position:
               
156-530
               

               
Cow position:
               
chr27:30362169-30362537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 12
               

               
Conread position:
               
156-629
               

               
Cow position:
               
chr27:13197827-13198299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 142
               

               
Conread position:
               
158-307
               

               
Cow position:
               
chr27:9504517-9504661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
131, 20
               

               
Conread position:
               
160-315
               

               
Cow position:
               
chr27:26979786-26979630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
67, 153
               

               
Conread position:
               
160-364
               

               
Cow position:
               
chr27:26141696-26141898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
160-366
               

               
Cow position:
               
chr27:7538151-7537948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
145, 23
               

               
Conread position:
               
160-618
               

               
Cow position:
               
chr27:27040528-27040980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 195
               

               
Conread position:
               
161-494
               

               
Cow position:
               
chr27:27259541-27259858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
218, 54
               

               
Conread position:
               
162-352
               

               
Cow position:
               
chr27:6350912-6350715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
56, 66
               

               
Conread position:
               
163-288
               

               
Cow position:
               
chr27:4486696-4486572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
163-352
               

               
Cow position:
               
chr27:18491769-18491956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
51, 97
               

               
Conread position:
               
163-439
               

               
Cow position:
               
chr27:21569911-21569644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 55
               

               
Conread position:
               
163-464
               

               
Cow position:
               
chr27:6522973-6523269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 53
               

               
Conread position:
               
164-439
               

               
Cow position:
               
chr27:29283478-29283211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
211, 53
               

               
Conread position:
               
167-331
               

               
Cow position:
               
chr27:31159733-31159897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
62, 87
               

               
Conread position:
               
168-362
               

               
Cow position:
               
chr27:20570053-20570246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
11, 50
               

               
Conread position:
               
168-473
               

               
Cow position:
               
chr27:14902719-14902417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 49
               

               
Conread position:
               
170-321
               

               
Cow position:
               
chr27:1565490-1565342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
170-418
               

               
Cow position:
               
chr27:27550798-27550570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
203, 30
               

               
Conread position:
               
172-465
               

               
Cow position:
               
chr27:6058441-6058726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 50
               

               
Conread position:
               
173-292
               

               
Cow position:
               
chr27:13802040-13802158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
173-365
               

               
Cow position:
               
chr27:10395320-10395134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
128, 29
               

               
Conread position:
               
173-626
               

               
Cow position:
               
chr27:8292062-8291621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 31
               

               
Conread position:
               
174-320
               

               
Cow position:
               
chr27:26236559-26236706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
40, 50
               

               
Conread position:
               
174-424
               

               
Cow position:
               
chr27:22268441-22268684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 50
               

               
Conread position:
               
174-426
               

               
Cow position:
               
chr27:31499010-31499253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
111, 40
               

               
Conread position:
               
174-430
               

               
Cow position:
               
chr27:20127083-20126837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
174-462
               

               
Cow position:
               
chr27:28038399-28038116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 22
               

               
Conread position:
               
174-581
               

               
Cow position:
               
chr27:16237849-16238243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
298, 79
               

               
Conread position:
               
174-620
               

               
Cow position:
               
chr27:27141542-27141978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
300, 44
               

               
Conread position:
               
176-463
               

               
Cow position:
               
chr27:1183942-1183654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 40
               

               
Conread position:
               
177-366
               

               
Cow position:
               
chr27:4011622-4011807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
177-629
               

               
Cow position:
               
chr27:16263285-16263710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 41
               

               
Conread position:
               
179-571
               

               
Cow position:
               
chr27:26398313-26397933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 44
               

               
Conread position:
               
181-332
               

               
Cow position:
               
chr27:4482909-4482763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
181-595
               

               
Cow position:
               
chr27:25790751-25791176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 37
               

               
Conread position:
               
185-328
               

               
Cow position:
               
chr27:23502439-23502583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
190-615
               

               
Cow position:
               
chr27:24559493-24559069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 123
               

               
Conread position:
               
194-432
               

               
Cow position:
               
chr27:30844118-30843888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
28, 81
               

               
Conread position:
               
201-438
               

               
Cow position:
               
chr27:20118373-20118599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
174, 14
               

               
Conread position:
               
201-447
               

               
Cow position:
               
chr27:18215020-18215262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 17
               

               
Conread position:
               
202-433
               

               
Cow position:
               
chr27:20591948-20592175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
111, 8
               

               
Conread position:
               
207-413
               

               
Cow position:
               
chr27:24357229-24357438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
212-618
               

               
Cow position:
               
chr27:12231936-12231527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 94
               

               
Conread position:
               
216-437
               

               
Cow position:
               
chr27:18434489-18434276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
160, 7
               

               
Conread position:
               
226-456
               

               
Cow position:
               
chr27:22498547-22498768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
150, 78
               

               
Conread position:
               
226-629
               

               
Cow position:
               
chr27:23455165-23454755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 212
               

               
Conread position:
               
228-435
               

               
Cow position:
               
chr27:6037115-6037317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
54, 62
               

               
Conread position:
               
235-464
               

               
Cow position:
               
chr27:11762735-11762516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
140, 55
               

               
Conread position:
               
239-417
               

               
Cow position:
               
chr27:24026977-24027148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
136, 88
               

               
Conread position:
               
239-623
               

               
Cow position:
               
chr27:16619991-16620375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 71
               

               
Conread position:
               
248-481
               

               
Cow position:
               
chr27:21419057-21418829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
61, 127
               

               
Conread position:
               
261-489
               

               
Cow position:
               
chr27:26436856-26436623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
53, 83
               

               
Conread position:
               
261-629
               

               
Cow position:
               
chr27:22179769-22179393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
159, 37
               

               
Conread position:
               
262-407
               

               
Cow position:
               
chr27:28009035-28008889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
40, 96
               

               
Conread position:
               
262-445
               

               
Cow position:
               
chr27:30989819-30989639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
113, 41
               

               
Conread position:
               
267-532
               

               
Cow position:
               
chr27:9977847-9978123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 88
               
Show alignments to all cow chromosomes.