Non-Coding RNA Search

Cow genome map


           Conread name:
           rnca33b_d16.y1
        

               Conread position:
               1-103
               

               Cow position:
               chrX:19161911-19162015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               89
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               1-109
               

               Cow position:
               chrX:42216414-42216520 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               90
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               1-121
               

               Cow position:
               chrX:42159161-42159037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               100
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               1-125
               

               Cow position:
               chrX:10479969-10479841 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               106
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               1-131
               

               Cow position:
               chrX:1996232-1996366 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               113
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               1-135
               

               Cow position:
               chrX:43028448-43028314 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               109
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               99, 71
               

               Conread position:
               1-136
               

               Cow position:
               chrX:42314672-42314811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               1-138
               

               Cow position:
               chrX:31279708-31279845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               99, 58
               

               Conread position:
               1-139
               

               Cow position:
               chrX:37717941-37717800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               119
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               71, 132
               

               Conread position:
               1-141
               

               Cow position:
               chrX:11670906-11670762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               113
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               1-143
               

               Cow position:
               chrX:42506727-42506875 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               1-146
               

               Cow position:
               chrX:25420543-25420402 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               117
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               14, 63
               

               Conread position:
               1-147
               

               Cow position:
               chrX:30789310-30789461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               1-147
               

               Cow position:
               chrX:33678251-33678403 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               1-150
               

               Cow position:
               chrX:41215542-41215389 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               1-150
               

               Cow position:
               chrX:45044673-45044519 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               1-151
               

               Cow position:
               chrX:34193861-34194015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               1-152
               

               Cow position:
               chrX:12197289-12197133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               71, 25
               

               Conread position:
               1-153
               

               Cow position:
               chrX:3494831-3494981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               99, 71
               

               Conread position:
               1-154
               

               Cow position:
               chrX:11529557-11529406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               99, 75
               

               Conread position:
               1-154
               

               Cow position:
               chrX:23485749-23485584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               125
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               1-154
               

               Cow position:
               chrX:26881860-26882017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               1-154
               

               Cow position:
               chrX:29681899-29682048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               109, 47
               

               Conread position:
               1-154
               

               Cow position:
               chrX:40556244-40556396 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               99, 52
               

               Conread position:
               1-155
               

               Cow position:
               chrX:16801048-16801201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               78, 25
               

               Conread position:
               1-158
               

               Cow position:
               chrX:11602268-11602424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               72, 22
               

               Conread position:
               1-160
               

               Cow position:
               chrX:5915410-5915245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               1-160
               

               Cow position:
               chrX:17550445-17550603 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               71, 106
               

               Conread position:
               1-160
               

               Cow position:
               chrX:28107065-28106904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               125
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               92, 71
               

               Conread position:
               1-160
               

               Cow position:
               chrX:41199441-41199281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               95, 67
               

               Conread position:
               1-160
               

               Cow position:
               chrX:42087045-42086885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               127
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               71, 25
               

               Conread position:
               1-161
               

               Cow position:
               chrX:32215448-32215284 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               1-163
               

               Cow position:
               chrX:39642409-39642568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               99, 71
               

               Conread position:
               1-166
               

               Cow position:
               chrX:9451560-9451396 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               67, 47
               

               Conread position:
               1-167
               

               Cow position:
               chrX:41363631-41363809 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               1-168
               

               Cow position:
               chrX:1938232-1938063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               133
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               72, 78
               

               Conread position:
               1-169
               

               Cow position:
               chrX:23497478-23497643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               131
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               113, 72
               

               Conread position:
               1-169
               

               Cow position:
               chrX:41166610-41166777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               129
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               109, 71
               

               Conread position:
               1-171
               

               Cow position:
               chrX:10415033-10415207 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               132
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               1-171
               

               Cow position:
               chrX:37867652-37867477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               1-171
               

               Cow position:
               chrX:42461408-42461572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               92, 56
               

               Conread position:
               1-172
               

               Cow position:
               chrX:1101769-1101602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               110, 69
               

               Conread position:
               1-173
               

               Cow position:
               chrX:597259-597430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               72, 126
               

               Conread position:
               1-173
               

               Cow position:
               chrX:6634564-6634388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               133
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               1-173
               

               Cow position:
               chrX:6640643-6640471 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               72, 77
               

               Conread position:
               1-173
               

               Cow position:
               chrX:13347488-13347317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               72, 113
               

               Conread position:
               1-173
               

               Cow position:
               chrX:14135894-14135723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               106, 72
               

               Conread position:
               1-173
               

               Cow position:
               chrX:41435323-41435505 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               139
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               1-174
               

               Cow position:
               chrX:5097575-5097756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               140
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               72, 15
               

               Conread position:
               1-174
               

               Cow position:
               chrX:31983359-31983542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               142
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               1-174
               

               Cow position:
               chrX:41858665-41858839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               97, 61
               

               Conread position:
               1-175
               

               Cow position:
               chrX:11517759-11517938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               1-175
               

               Cow position:
               chrX:14951134-14951311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               1-175
               

               Cow position:
               chrX:19203126-19203304 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               131
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               1-175
               

               Cow position:
               chrX:27415369-27415538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               136
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               90, 38
               

               Conread position:
               1-175
               

               Cow position:
               chrX:35409971-35409794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               148
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               72, 120
               

               Conread position:
               1-176
               

               Cow position:
               chrX:46068545-46068718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               92, 9
               

               Conread position:
               1-178
               

               Cow position:
               chrX:48495217-48495036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               65, 162
               

               Conread position:
               1-179
               

               Cow position:
               chrX:1121147-1121329 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               1-180
               

               Cow position:
               chrX:16556004-16556180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               138
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               101, 71
               

               Conread position:
               1-180
               

               Cow position:
               chrX:42875428-42875250 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               145
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               99, 71
               

               Conread position:
               1-182
               

               Cow position:
               chrX:10279094-10278899 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               72, 22
               

               Conread position:
               1-182
               

               Cow position:
               chrX:27270588-27270410 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               92, 25
               

               Conread position:
               1-182
               

               Cow position:
               chrX:34991580-34991399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               136
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               99, 72
               

               Conread position:
               1-184
               

               Cow position:
               chrX:46533085-46533272 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               146
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               1-185
               

               Cow position:
               chrX:8327124-8326936 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               1-186
               

               Cow position:
               chrX:18439216-18439027 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               1-187
               

               Cow position:
               chrX:4092141-4091954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               154
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               72, 22
               

               Conread position:
               1-187
               

               Cow position:
               chrX:4612655-4612852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               60, 22
               

               Conread position:
               1-187
               

               Cow position:
               chrX:30958947-30958756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               72, 28
               

               Conread position:
               1-187
               

               Cow position:
               chrX:47601104-47601293 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               59, 73
               

               Conread position:
               1-188
               

               Cow position:
               chrX:51683-51867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               72, 78
               

               Conread position:
               1-188
               

               Cow position:
               chrX:2314399-2314590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               154
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               1-188
               

               Cow position:
               chrX:39886993-39887186 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               72, 147
               

               Conread position:
               1-188
               

               Cow position:
               chrX:40649121-40648923 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               66, 123
               

               Conread position:
               1-189
               

               Cow position:
               chrX:11674331-11674141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               72, 167
               

               Conread position:
               1-190
               

               Cow position:
               chrX:1960206-1960398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               71, 62
               

               Conread position:
               1-190
               

               Cow position:
               chrX:11454393-11454213 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               150
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               91, 51
               

               Conread position:
               1-191
               

               Cow position:
               chrX:7910854-7911046 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               72, 9
               

               Conread position:
               1-191
               

               Cow position:
               chrX:35681786-35681592 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               153
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               72, 80
               

               Conread position:
               1-192
               

               Cow position:
               chrX:17298479-17298283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               72, 143
               

               Conread position:
               1-192
               

               Cow position:
               chrX:32867089-32866900 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               99, 67
               

               Conread position:
               1-197
               

               Cow position:
               chrX:28068070-28067870 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               161
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               1-197
               

               Cow position:
               chrX:41454734-41454934 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               1-198
               

               Cow position:
               chrX:32877160-32877356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               92, 23
               

               Conread position:
               1-198
               

               Cow position:
               chrX:47855196-47855000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               99, 72
               

               Conread position:
               1-201
               

               Cow position:
               chrX:20583879-20583682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               99, 22
               

               Conread position:
               1-201
               

               Cow position:
               chrX:31480185-31479987 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               153
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               92, 67
               

               Conread position:
               1-203
               

               Cow position:
               chrX:40574724-40574928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               89, 166
               

               Conread position:
               1-204
               

               Cow position:
               chrX:8759842-8759637 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               165
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               72, 130
               

               Conread position:
               1-206
               

               Cow position:
               chrX:19356683-19356480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               166
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               72, 139
               

               Conread position:
               1-209
               

               Cow position:
               chrX:16323796-16324006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               72, 158
               

               Conread position:
               1-210
               

               Cow position:
               chrX:19717730-19717529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               110, 22
               

               Conread position:
               1-211
               

               Cow position:
               chrX:19018609-19018825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               169
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               1-211
               

               Cow position:
               chrX:38302033-38301815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               167
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               1-212
               

               Cow position:
               chrX:19761968-19761759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               92, 67
               

               Conread position:
               1-213
               

               Cow position:
               chrX:32942861-32943072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               72, 23
               

               Conread position:
               1-214
               

               Cow position:
               chrX:17524164-17524381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               172
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               1-214
               

               Cow position:
               chrX:38968114-38967891 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               172
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               75, 150
               

               Conread position:
               1-216
               

               Cow position:
               chrX:4467170-4466968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               1-216
               

               Cow position:
               chrX:14985943-14986150 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               81, 47
               

               Conread position:
               1-217
               

               Cow position:
               chrX:4327963-4328183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               174
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               1-217
               

               Cow position:
               chrX:31744796-31745005 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               99, 50
               

               Conread position:
               1-219
               

               Cow position:
               chrX:32910316-32910102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               168
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               99, 68
               

               Conread position:
               1-219
               

               Cow position:
               chrX:42480046-42479831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               157
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               27, 18
               

               Conread position:
               1-220
               

               Cow position:
               chrX:2936172-2935954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               99, 68
               

               Conread position:
               1-220
               

               Cow position:
               chrX:39290574-39290356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               28, 59
               

               Conread position:
               1-221
               

               Cow position:
               chrX:22864042-22864278 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               1-221
               

               Cow position:
               chrX:35278529-35278325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               164
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               1-221
               

               Cow position:
               chrX:38587626-38587847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               170
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               72, 18
               

               Conread position:
               1-222
               

               Cow position:
               chrX:26979572-26979793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               71, 28
               

               Conread position:
               1-222
               

               Cow position:
               chrX:40337130-40336906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               183
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 160
               

               Conread position:
               1-223
               

               Cow position:
               chrX:16984854-16984637 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               99, 71
               

               Conread position:
               1-226
               

               Cow position:
               chrX:36109395-36109626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               1-227
               

               Cow position:
               chrX:47345549-47345318 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               70, 88
               

               Conread position:
               1-228
               

               Cow position:
               chrX:17293175-17292943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               1-229
               

               Cow position:
               chrX:11762792-11763014 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               179
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               100, 61
               

               Conread position:
               1-230
               

               Cow position:
               chrX:24170506-24170742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 130
               

               Conread position:
               1-235
               

               Cow position:
               chrX:6267889-6267651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               72, 124
               

               Conread position:
               1-235
               

               Cow position:
               chrX:35276205-35275969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 191
               

               Conread position:
               1-235
               

               Cow position:
               chrX:47255668-47255430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               1-236
               

               Cow position:
               chrX:42282796-42282559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               58, 77
               

               Conread position:
               1-236
               

               Cow position:
               chrX:42449794-42450033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               1-248
               

               Cow position:
               chrX:4289653-4289410 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               99, 58
               

               Conread position:
               1-250
               

               Cow position:
               chrX:3650394-3650151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               175
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               72, 52
               

               Conread position:
               1-250
               

               Cow position:
               chrX:48574866-48574615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               71, 220
               

               Conread position:
               1-251
               

               Cow position:
               chrX:11325889-11326132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               185
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               99, 67
               

               Conread position:
               1-251
               

               Cow position:
               chrX:24457328-24457585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               72, 241
               

               Conread position:
               1-255
               

               Cow position:
               chrX:28940463-28940210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               193
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               99, 74
               

               Conread position:
               1-255
               

               Cow position:
               chrX:42894141-42893881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 74
               

               Conread position:
               1-263
               

               Cow position:
               chrX:4645695-4645956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 85
               

               Conread position:
               1-263
               

               Cow position:
               chrX:36367715-36367986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               201
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               72, 222
               

               Conread position:
               1-265
               

               Cow position:
               chrX:34540902-34540633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               180
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               56, 99
               

               Conread position:
               1-266
               

               Cow position:
               chrX:17956908-17956648 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 72
               

               Conread position:
               1-266
               

               Cow position:
               chrX:36391969-36392235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               202
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               108, 79
               

               Conread position:
               1-269
               

               Cow position:
               chrX:27074832-27075097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 220
               

               Conread position:
               1-272
               

               Cow position:
               chrX:24335857-24336132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               187
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               71, 227
               

               Conread position:
               1-273
               

               Cow position:
               chrX:41941842-41941574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 49
               

               Conread position:
               1-274
               

               Cow position:
               chrX:44339102-44339379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               210
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               72, 20
               

               Conread position:
               1-279
               

               Cow position:
               chrX:39352991-39352720 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               99, 67
               

               Conread position:
               1-281
               

               Cow position:
               chrX:4109404-4109128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 204
               

               Conread position:
               1-282
               

               Cow position:
               chrX:296611-296332 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               212
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               72, 152
               

               Conread position:
               1-282
               

               Cow position:
               chrX:44040396-44040109 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               72, 164
               

               Conread position:
               1-282
               

               Cow position:
               chrX:48558965-48558686 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               209
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               72, 39
               

               Conread position:
               1-283
               

               Cow position:
               chrX:12437064-12437334 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               109, 51
               

               Conread position:
               1-288
               

               Cow position:
               chrX:13122163-13121862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 299
               

               Conread position:
               1-291
               

               Cow position:
               chrX:25037211-25036915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 222
               

               Conread position:
               1-292
               

               Cow position:
               chrX:1087929-1088209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               100, 58
               

               Conread position:
               1-292
               

               Cow position:
               chrX:48004065-48003774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               70, 228
               

               Conread position:
               1-294
               

               Cow position:
               chrX:36866392-36866096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 239
               

               Conread position:
               1-296
               

               Cow position:
               chrX:5134693-5134395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               205
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               52, 181
               

               Conread position:
               1-299
               

               Cow position:
               chrX:39220307-39220000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 234
               

               Conread position:
               1-302
               

               Cow position:
               chrX:22115095-22115401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               220
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               28, 220
               

               Conread position:
               1-303
               

               Cow position:
               chrX:35590539-35590841 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               72, 111
               

               Conread position:
               1-306
               

               Cow position:
               chrX:6559237-6559532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 114
               

               Conread position:
               1-307
               

               Cow position:
               chrX:20881742-20882025 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 72
               

               Conread position:
               1-307
               

               Cow position:
               chrX:27261409-27261100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 20
               

               Conread position:
               1-307
               

               Cow position:
               chrX:40680834-40680523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               1-309
               

               Cow position:
               chrX:33654624-33654931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 219
               

               Conread position:
               1-309
               

               Cow position:
               chrX:45413394-45413715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               36, 252
               

               Conread position:
               1-312
               

               Cow position:
               chrX:25282795-25283107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               215
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               68, 150
               

               Conread position:
               1-316
               

               Cow position:
               chrX:1466382-1466063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               226
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               35, 82
               

               Conread position:
               1-317
               

               Cow position:
               chrX:12095552-12095870 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 223
               

               Conread position:
               1-319
               

               Cow position:
               chrX:19469296-19469597 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               222
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               109, 69
               

               Conread position:
               1-320
               

               Cow position:
               chrX:10516473-10516157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 273
               

               Conread position:
               1-320
               

               Cow position:
               chrX:10829654-10829333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               208
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               72, 223
               

               Conread position:
               1-330
               

               Cow position:
               chrX:40175395-40175058 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               72, 173
               

               Conread position:
               1-332
               

               Cow position:
               chrX:17949273-17949601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 194
               

               Conread position:
               1-332
               

               Cow position:
               chrX:38654213-38654541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               245
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               72, 149
               

               Conread position:
               1-333
               

               Cow position:
               chrX:13924080-13923759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               238
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               92, 67
               

               Conread position:
               1-338
               

               Cow position:
               chrX:4296605-4296945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               243
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               72, 216
               

               Conread position:
               1-338
               

               Cow position:
               chrX:22284058-22283718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               248
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               72, 146
               

               Conread position:
               1-339
               

               Cow position:
               chrX:46546654-46546995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               233
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               23, 273
               

               Conread position:
               1-341
               

               Cow position:
               chrX:4403537-4403194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 224
               

               Conread position:
               1-351
               

               Cow position:
               chrX:45875609-45875261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 25
               

               Conread position:
               1-353
               

               Cow position:
               chrX:40685110-40685463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 71
               

               Conread position:
               1-354
               

               Cow position:
               chrX:41871276-41870938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               245
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               94, 45
               

               Conread position:
               1-355
               

               Cow position:
               chrX:34315746-34315396 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 264
               

               Conread position:
               1-356
               

               Cow position:
               chrX:41027379-41027022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 308
               

               Conread position:
               1-360
               

               Cow position:
               chrX:18204247-18204602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 22
               

               Conread position:
               1-365
               

               Cow position:
               chrX:20168774-20168414 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 23
               

               Conread position:
               1-365
               

               Cow position:
               chrX:21986082-21986436 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 67
               

               Conread position:
               1-365
               

               Cow position:
               chrX:29723970-29723597 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 231
               

               Conread position:
               1-365
               

               Cow position:
               chrX:34314240-34313889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 72
               

               Conread position:
               1-365
               

               Cow position:
               chrX:47279717-47280076 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               261
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               72, 106
               

               Conread position:
               1-366
               

               Cow position:
               chrX:4512464-4512090 (view UCSC Genome Browser custom track)
               

               Alignm length:
               377
               

               Alignm identity:
               248
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               72, 313
               

               Conread position:
               1-380
               

               Cow position:
               chrX:35822550-35822184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 25
               

               Conread position:
               1-390
               

               Cow position:
               chrX:8917614-8917226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               395
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 221
               

               Conread position:
               1-394
               

               Cow position:
               chrX:25207642-25208017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               398
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 68
               

               Conread position:
               1-395
               

               Cow position:
               chrX:27145818-27145452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               398
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 67
               

               Conread position:
               1-395
               

               Cow position:
               chrX:34792104-34792482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               398
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 22
               

               Conread position:
               1-395
               

               Cow position:
               chrX:37956064-37955666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               413
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 22
               

               Conread position:
               1-397
               

               Cow position:
               chrX:18486022-18485621 (view UCSC Genome Browser custom track)
               

               Alignm length:
               407
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 224
               

               Conread position:
               1-397
               

               Cow position:
               chrX:22387024-22387421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               412
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 22
               

               Conread position:
               1-397
               

               Cow position:
               chrX:35885513-35885903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               401
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 67
               

               Conread position:
               1-407
               

               Cow position:
               chrX:47657612-47657181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               435
               

               Alignm identity:
               293
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               50, 235
               

               Conread position:
               1-414
               

               Cow position:
               chrX:8869185-8869599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               423
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 58
               

               Conread position:
               1-417
               

               Cow position:
               chrX:33001117-33000710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               423
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 56
               

               Conread position:
               1-421
               

               Cow position:
               chrX:10251983-10252379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               425
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 76
               

               Conread position:
               1-422
               

               Cow position:
               chrX:1499873-1499471 (view UCSC Genome Browser custom track)
               

               Alignm length:
               423
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               373, 87
               

               Conread position:
               1-422
               

               Cow position:
               chrX:4825629-4826026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               429
               

               Alignm identity:
               302
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               100, 50
               

               Conread position:
               1-430
               

               Cow position:
               chrX:27175219-27174789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               440
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 169
               

               Conread position:
               1-430
               

               Cow position:
               chrX:34412067-34411634 (view UCSC Genome Browser custom track)
               

               Alignm length:
               438
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 310
               

               Conread position:
               1-434
               

               Cow position:
               chrX:29542009-29542430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               437
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 76
               

               Conread position:
               1-439
               

               Cow position:
               chrX:40567824-40567383 (view UCSC Genome Browser custom track)
               

               Alignm length:
               457
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 173
               

               Conread position:
               1-440
               

               Cow position:
               chrX:11633901-11633461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               446
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 72
               

               Conread position:
               1-440
               

               Cow position:
               chrX:36356323-36355905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 72
               

               Conread position:
               1-441
               

               Cow position:
               chrX:29601610-29602051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               446
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 75
               

               Conread position:
               1-446
               

               Cow position:
               chrX:46072611-46073044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               453
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 68
               

               Conread position:
               1-449
               

               Cow position:
               chrX:21642262-21642703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               454
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 226
               

               Conread position:
               1-454
               

               Cow position:
               chrX:7722193-7721754 (view UCSC Genome Browser custom track)
               

               Alignm length:
               458
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               217, 22
               

               Conread position:
               1-456
               

               Cow position:
               chrX:9201762-9201315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               461
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 60
               

               Conread position:
               1-458
               

               Cow position:
               chrX:30962656-30963106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               465
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 227
               

               Conread position:
               1-458
               

               Cow position:
               chrX:32330390-32329927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               475
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 171
               

               Conread position:
               1-459
               

               Cow position:
               chrX:22075014-22074565 (view UCSC Genome Browser custom track)
               

               Alignm length:
               469
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 20
               

               Conread position:
               1-459
               

               Cow position:
               chrX:27515078-27514633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               467
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 220
               

               Conread position:
               1-460
               

               Cow position:
               chrX:30420748-30421175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               471
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 65
               

               Conread position:
               1-463
               

               Cow position:
               chrX:11938734-11939163 (view UCSC Genome Browser custom track)
               

               Alignm length:
               466
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 60
               

               Conread position:
               1-463
               

               Cow position:
               chrX:45598389-45598843 (view UCSC Genome Browser custom track)
               

               Alignm length:
               468
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 68
               

               Conread position:
               1-464
               

               Cow position:
               chrX:38642461-38642020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               471
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 32
               

               Conread position:
               1-464
               

               Cow position:
               chrX:44961974-44961507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               475
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 138
               

               Conread position:
               1-468
               

               Cow position:
               chrX:20677583-20677121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               479
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 22
               

               Conread position:
               1-472
               

               Cow position:
               chrX:20152067-20151602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               486
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 58
               

               Conread position:
               1-472
               

               Cow position:
               chrX:32019914-32020370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               478
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 192
               

               Conread position:
               1-473
               

               Cow position:
               chrX:24365603-24366078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               486
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 128
               

               Conread position:
               1-473
               

               Cow position:
               chrX:25815680-25816145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               484
               

               Alignm identity:
               360
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 262
               

               Conread position:
               1-473
               

               Cow position:
               chrX:27508805-27509269 (view UCSC Genome Browser custom track)
               

               Alignm length:
               479
               

               Alignm identity:
               375
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 142
               

               Conread position:
               1-485
               

               Cow position:
               chrX:27431705-27432182 (view UCSC Genome Browser custom track)
               

               Alignm length:
               493
               

               Alignm identity:
               368
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 22
               

               Conread position:
               1-494
               

               Cow position:
               chrX:40183135-40183623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               503
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 219
               

               Conread position:
               1-496
               

               Cow position:
               chrX:8925899-8925431 (view UCSC Genome Browser custom track)
               

               Alignm length:
               500
               

               Alignm identity:
               375
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               375, 57
               

               Conread position:
               1-516
               

               Cow position:
               chrX:41238143-41238661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               535
               

               Alignm identity:
               400
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 68
               

               Conread position:
               1-521
               

               Cow position:
               chrX:33466841-33466314 (view UCSC Genome Browser custom track)
               

               Alignm length:
               549
               

               Alignm identity:
               416
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 22
               

               Conread position:
               1-530
               

               Cow position:
               chrX:7351520-7350990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               545
               

               Alignm identity:
               428
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 22
               

               Conread position:
               1-548
               

               Cow position:
               chrX:5637960-5638498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               559
               

               Alignm identity:
               403
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               375, 68
               

               Conread position:
               1-552
               

               Cow position:
               chrX:26493226-26492668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               566
               

               Alignm identity:
               417
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 223
               

               Conread position:
               1-555
               

               Cow position:
               chrX:15546100-15545559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               565
               

               Alignm identity:
               434
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 26
               

               Conread position:
               1-564
               

               Cow position:
               chrX:31436688-31436133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               577
               

               Alignm identity:
               422
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 70
               

               Conread position:
               1-564
               

               Cow position:
               chrX:31442620-31443168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               574
               

               Alignm identity:
               432
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 67
               

               Conread position:
               1-564
               

               Cow position:
               chrX:42492302-42492877 (view UCSC Genome Browser custom track)
               

               Alignm length:
               592
               

               Alignm identity:
               436
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 221
               

               Conread position:
               1-564
               

               Cow position:
               chrX:44397230-44396673 (view UCSC Genome Browser custom track)
               

               Alignm length:
               575
               

               Alignm identity:
               403
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 133
               

               Conread position:
               1-571
               

               Cow position:
               chrX:13913294-13912725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               592
               

               Alignm identity:
               423
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 104
               

               Conread position:
               1-581
               

               Cow position:
               chrX:30337735-30338283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               594
               

               Alignm identity:
               389
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               72, 147
               

               Conread position:
               1-607
               

               Cow position:
               chrX:38218932-38218328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               621
               

               Alignm identity:
               476
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 72
               

               Conread position:
               1-608
               

               Cow position:
               chrX:30133105-30133699 (view UCSC Genome Browser custom track)
               

               Alignm length:
               618
               

               Alignm identity:
               446
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 26
               

               Conread position:
               1-609
               

               Cow position:
               chrX:7695982-7695372 (view UCSC Genome Browser custom track)
               

               Alignm length:
               633
               

               Alignm identity:
               465
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 172
               

               Conread position:
               1-617
               

               Cow position:
               chrX:34441234-34441847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               627
               

               Alignm identity:
               494
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 191
               

               Conread position:
               1-618
               

               Cow position:
               chrX:6544464-6543855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               628
               

               Alignm identity:
               458
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 72
               

               Conread position:
               1-618
               

               Cow position:
               chrX:11656297-11655676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               641
               

               Alignm identity:
               478
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 68
               

               Conread position:
               1-619
               

               Cow position:
               chrX:9251944-9252573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               638
               

               Alignm identity:
               474
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 207
               

               Conread position:
               1-625
               

               Cow position:
               chrX:35269075-35268485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               636
               

               Alignm identity:
               479
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 26
               

               Conread position:
               1-625
               

               Cow position:
               chrX:37489948-37489309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               661
               

               Alignm identity:
               491
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 115
               

               Conread position:
               1-625
               

               Cow position:
               chrX:44055022-44054396 (view UCSC Genome Browser custom track)
               

               Alignm length:
               640
               

               Alignm identity:
               490
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 216
               

               Conread position:
               1-626
               

               Cow position:
               chrX:15146980-15147591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               638
               

               Alignm identity:
               484
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 25
               

               Conread position:
               1-627
               

               Cow position:
               chrX:20887430-20888054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               648
               

               Alignm identity:
               489
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 23
               

               Conread position:
               1-627
               

               Cow position:
               chrX:40480629-40481281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               663
               

               Alignm identity:
               498
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 179
               

               Conread position:
               1-627
               

               Cow position:
               chrX:41790208-41790841 (view UCSC Genome Browser custom track)
               

               Alignm length:
               655
               

               Alignm identity:
               479
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 298
               

               Conread position:
               1-627
               

               Cow position:
               chrX:41878718-41879340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               641
               

               Alignm identity:
               500
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 26
               

               Conread position:
               1-627
               

               Cow position:
               chrX:45502354-45501738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               640
               

               Alignm identity:
               452
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 22
               

               Conread position:
               1-628
               

               Cow position:
               chrX:27446902-27446279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               643
               

               Alignm identity:
               496
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 56
               

               Conread position:
               1-628
               

               Cow position:
               chrX:31729656-31729047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               639
               

               Alignm identity:
               468
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 68
               

               Conread position:
               1-628
               

               Cow position:
               chrX:34565504-34564889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               640
               

               Alignm identity:
               480
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 82
               

               Conread position:
               1-628
               

               Cow position:
               chrX:44192223-44192853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               646
               

               Alignm identity:
               475
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 340
               

               Conread position:
               1-629
               

               Cow position:
               chrX:152124-151491 (view UCSC Genome Browser custom track)
               

               Alignm length:
               649
               

               Alignm identity:
               487
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 159
               

               Conread position:
               1-629
               

               Cow position:
               chrX:3654822-3654197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               639
               

               Alignm identity:
               455
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 48
               

               Conread position:
               1-629
               

               Cow position:
               chrX:4632635-4633269 (view UCSC Genome Browser custom track)
               

               Alignm length:
               653
               

               Alignm identity:
               500
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 219
               

               Conread position:
               1-629
               

               Cow position:
               chrX:7278125-7277520 (view UCSC Genome Browser custom track)
               

               Alignm length:
               642
               

               Alignm identity:
               468
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 26
               

               Conread position:
               1-629
               

               Cow position:
               chrX:9650808-9651458 (view UCSC Genome Browser custom track)
               

               Alignm length:
               659
               

               Alignm identity:
               478
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 71
               

               Conread position:
               1-629
               

               Cow position:
               chrX:10865651-10866279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               645
               

               Alignm identity:
               475
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 177
               

               Conread position:
               1-629
               

               Cow position:
               chrX:12290937-12290325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               640
               

               Alignm identity:
               470
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 72
               

               Conread position:
               1-629
               

               Cow position:
               chrX:13177265-13177872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               644
               

               Alignm identity:
               461
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 22
               

               Conread position:
               1-629
               

               Cow position:
               chrX:14883738-14884374 (view UCSC Genome Browser custom track)
               

               Alignm length:
               644
               

               Alignm identity:
               454
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 68
               

               Conread position:
               1-629
               

               Cow position:
               chrX:17795198-17794583 (view UCSC Genome Browser custom track)
               

               Alignm length:
               640
               

               Alignm identity:
               451
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 10
               

               Conread position:
               1-629
               

               Cow position:
               chrX:21593510-21592874 (view UCSC Genome Browser custom track)
               

               Alignm length:
               649
               

               Alignm identity:
               510
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 22
               

               Conread position:
               1-629
               

               Cow position:
               chrX:23563571-23564209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               644
               

               Alignm identity:
               475
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 220
               

               Conread position:
               1-629
               

               Cow position:
               chrX:31489740-31489100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               645
               

               Alignm identity:
               504
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 249
               

               Conread position:
               1-629
               

               Cow position:
               chrX:38094307-38094937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               643
               

               Alignm identity:
               500
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 25
               

               Conread position:
               1-629
               

               Cow position:
               chrX:38964316-38963701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               640
               

               Alignm identity:
               507
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 52
               

               Conread position:
               1-629
               

               Cow position:
               chrX:40269727-40269064 (view UCSC Genome Browser custom track)
               

               Alignm length:
               668
               

               Alignm identity:
               490
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 43
               

               Conread position:
               1-629
               

               Cow position:
               chrX:40826531-40827157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               643
               

               Alignm identity:
               460
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 209
               

               Conread position:
               1-629
               

               Cow position:
               chrX:46532271-46532932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               663
               

               Alignm identity:
               512
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 456
               

               Conread position:
               2-141
               

               Cow position:
               chrX:34108140-34108282 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               109
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               71, 37
               

               Conread position:
               2-154
               

               Cow position:
               chrX:6480377-6480533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               125
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               2-169
               

               Cow position:
               chrX:4602720-4602890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               71, 141
               

               Conread position:
               2-174
               

               Cow position:
               chrX:23471650-23471823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               79, 66
               

               Conread position:
               2-181
               

               Cow position:
               chrX:876629-876806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               71, 44
               

               Conread position:
               2-181
               

               Cow position:
               chrX:3606099-3605916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               128
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               2-181
               

               Cow position:
               chrX:15545045-15545227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               70, 158
               

               Conread position:
               2-184
               

               Cow position:
               chrX:17498541-17498355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               154
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               2-184
               

               Cow position:
               chrX:33020656-33020470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               2-187
               

               Cow position:
               chrX:27416313-27416122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               61, 145
               

               Conread position:
               2-189
               

               Cow position:
               chrX:44995718-44995526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               156
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               2-214
               

               Cow position:
               chrX:25049063-25049279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               2-217
               

               Cow position:
               chrX:12972896-12972681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               98, 71
               

               Conread position:
               2-222
               

               Cow position:
               chrX:8493284-8493061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               70, 11
               

               Conread position:
               2-224
               

               Cow position:
               chrX:1553188-1552962 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               2-227
               

               Cow position:
               chrX:45139713-45139940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               69, 214
               

               Conread position:
               2-245
               

               Cow position:
               chrX:45403327-45403572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               70, 219
               

               Conread position:
               2-250
               

               Cow position:
               chrX:44201827-44202078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               175
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               70, 237
               

               Conread position:
               2-250
               

               Cow position:
               chrX:45391495-45391745 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               70, 219
               

               Conread position:
               2-250
               

               Cow position:
               chrX:47358532-47358276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               177
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               70, 242
               

               Conread position:
               2-250
               

               Cow position:
               chrX:48194673-48194922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               69, 218
               

               Conread position:
               2-251
               

               Cow position:
               chrX:19394773-19394520 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               71, 221
               

               Conread position:
               2-251
               

               Cow position:
               chrX:27306657-27306420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               98, 50
               

               Conread position:
               2-273
               

               Cow position:
               chrX:35986033-35985764 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               196
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               65, 22
               

               Conread position:
               2-277
               

               Cow position:
               chrX:30549-30271 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               198
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               71, 10
               

               Conread position:
               2-308
               

               Cow position:
               chrX:48071380-48071072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               70, 219
               

               Conread position:
               2-310
               

               Cow position:
               chrX:10859095-10859389 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               212
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               106, 70
               

               Conread position:
               2-338
               

               Cow position:
               chrX:44744604-44744934 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               223
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               71, 116
               

               Conread position:
               2-343
               

               Cow position:
               chrX:40320625-40320283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 236
               

               Conread position:
               2-344
               

               Cow position:
               chrX:18111597-18111267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               246
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               70, 219
               

               Conread position:
               2-353
               

               Cow position:
               chrX:48262823-48262474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               232
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               71, 48
               

               Conread position:
               2-357
               

               Cow position:
               chrX:36393123-36393483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 143
               

               Conread position:
               2-394
               

               Cow position:
               chrX:22921539-22921143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               398
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 235
               

               Conread position:
               2-402
               

               Cow position:
               chrX:9770468-9770863 (view UCSC Genome Browser custom track)
               

               Alignm length:
               412
               

               Alignm identity:
               269
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               71, 152
               

               Conread position:
               2-411
               

               Cow position:
               chrX:7863362-7863758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               417
               

               Alignm identity:
               280
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               70, 211
               

               Conread position:
               2-447
               

               Cow position:
               chrX:16541438-16541899 (view UCSC Genome Browser custom track)
               

               Alignm length:
               465
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 178
               

               Conread position:
               2-464
               

               Cow position:
               chrX:38935497-38935041 (view UCSC Genome Browser custom track)
               

               Alignm length:
               470
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 166
               

               Conread position:
               2-464
               

               Cow position:
               chrX:47248579-47249028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               470
               

               Alignm identity:
               308
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               86, 59
               

               Conread position:
               2-465
               

               Cow position:
               chrX:21663513-21663068 (view UCSC Genome Browser custom track)
               

               Alignm length:
               470
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 219
               

               Conread position:
               2-473
               

               Cow position:
               chrX:47588931-47588452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               483
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 220
               

               Conread position:
               2-511
               

               Cow position:
               chrX:46032510-46033011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               521
               

               Alignm identity:
               381
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 24
               

               Conread position:
               2-517
               

               Cow position:
               chrX:1175772-1176273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               525
               

               Alignm identity:
               385
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 47
               

               Conread position:
               2-587
               

               Cow position:
               chrX:31250608-31250022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               600
               

               Alignm identity:
               461
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 237
               

               Conread position:
               2-596
               

               Cow position:
               chrX:25035163-25035765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               609
               

               Alignm identity:
               465
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 225
               

               Conread position:
               2-608
               

               Cow position:
               chrX:42246963-42247566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               619
               

               Alignm identity:
               500
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 301
               

               Conread position:
               2-609
               

               Cow position:
               chrX:5872550-5871921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               637
               

               Alignm identity:
               496
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 234
               

               Conread position:
               2-616
               

               Cow position:
               chrX:15006941-15007550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               625
               

               Alignm identity:
               473
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 67
               

               Conread position:
               2-627
               

               Cow position:
               chrX:47873118-47873743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               639
               

               Alignm identity:
               429
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 84
               

               Conread position:
               2-628
               

               Cow position:
               chrX:31948716-31949341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               641
               

               Alignm identity:
               476
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 250
               

               Conread position:
               2-629
               

               Cow position:
               chrX:15485415-15486037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               640
               

               Alignm identity:
               469
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 207
               

               Conread position:
               2-629
               

               Cow position:
               chrX:34554942-34554323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               637
               

               Alignm identity:
               465
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 206
               

               Conread position:
               2-629
               

               Cow position:
               chrX:47210618-47211264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               652
               

               Alignm identity:
               451
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 243
               

               Conread position:
               3-104
               

               Cow position:
               chrX:23185120-23185223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               89
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               3-124
               

               Cow position:
               chrX:26367485-26367610 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               98
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               3-126
               

               Cow position:
               chrX:15533993-15534121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               103
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               3-137
               

               Cow position:
               chrX:17929215-17929081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               106
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               93, 65
               

               Conread position:
               3-142
               

               Cow position:
               chrX:3543082-3542931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               117
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               3-144
               

               Cow position:
               chrX:4486807-4486951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               70, 75
               

               Conread position:
               3-151
               

               Cow position:
               chrX:48574137-48574291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               122
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               3-154
               

               Cow position:
               chrX:11589150-11589304 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               70, 49
               

               Conread position:
               3-165
               

               Cow position:
               chrX:4169811-4169979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               29, 72
               

               Conread position:
               3-165
               

               Cow position:
               chrX:22552762-22552927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               128
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               70, 21
               

               Conread position:
               3-169
               

               Cow position:
               chrX:37867471-37867301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               3-169
               

               Cow position:
               chrX:47100377-47100549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               133
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               60, 78
               

               Conread position:
               3-173
               

               Cow position:
               chrX:41453516-41453346 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               131
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               97, 52
               

               Conread position:
               3-173
               

               Cow position:
               chrX:42515912-42516085 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               126
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               70, 139
               

               Conread position:
               3-180
               

               Cow position:
               chrX:42760470-42760289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               3-184
               

               Cow position:
               chrX:42539764-42539593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               3-187
               

               Cow position:
               chrX:25930857-25930667 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               70, 29
               

               Conread position:
               3-189
               

               Cow position:
               chrX:34398566-34398756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               3-191
               

               Cow position:
               chrX:23358900-23359085 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               145
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               97, 69
               

               Conread position:
               3-191
               

               Cow position:
               chrX:32190955-32191147 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               3-209
               

               Cow position:
               chrX:27447934-27447708 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               3-209
               

               Cow position:
               chrX:35285391-35285181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               173
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               3-212
               

               Cow position:
               chrX:1122330-1122538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               173
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 14
               

               Conread position:
               3-213
               

               Cow position:
               chrX:37856578-37856356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               3-214
               

               Cow position:
               chrX:35659011-35658803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               70, 20
               

               Conread position:
               3-216
               

               Cow position:
               chrX:27668745-27668957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               97, 36
               

               Conread position:
               3-216
               

               Cow position:
               chrX:34420953-34420735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               176
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               3-218
               

               Cow position:
               chrX:4559951-4559738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               169
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               70, 155
               

               Conread position:
               3-220
               

               Cow position:
               chrX:16836077-16836289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               90, 56
               

               Conread position:
               3-220
               

               Cow position:
               chrX:23335758-23335975 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               169
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               69, 152
               

               Conread position:
               3-220
               

               Cow position:
               chrX:29451328-29451544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               69, 182
               

               Conread position:
               3-220
               

               Cow position:
               chrX:42331490-42331275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               98, 21
               

               Conread position:
               3-221
               

               Cow position:
               chrX:30672167-30672400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               3-222
               

               Cow position:
               chrX:3806895-3806676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               180
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 56
               

               Conread position:
               3-222
               

               Cow position:
               chrX:26843049-26843276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               3-228
               

               Cow position:
               chrX:29478939-29478713 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               182
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 70
               

               Conread position:
               3-239
               

               Cow position:
               chrX:42836398-42836164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 83
               

               Conread position:
               3-246
               

               Cow position:
               chrX:6599557-6599811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               50, 78
               

               Conread position:
               3-248
               

               Cow position:
               chrX:24749304-24749058 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               181
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               70, 157
               

               Conread position:
               3-248
               

               Cow position:
               chrX:47061603-47061365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               167
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               107, 10
               

               Conread position:
               3-250
               

               Cow position:
               chrX:44091140-44090891 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               69, 218
               

               Conread position:
               3-251
               

               Cow position:
               chrX:35431024-35431276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               189
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               69, 100
               

               Conread position:
               3-263
               

               Cow position:
               chrX:22392771-22393030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               188
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               110, 70
               

               Conread position:
               3-276
               

               Cow position:
               chrX:40108296-40108573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               57, 219
               

               Conread position:
               3-280
               

               Cow position:
               chrX:7648195-7648462 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               211
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               22, 105
               

               Conread position:
               3-280
               

               Cow position:
               chrX:27380577-27380292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               198
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               69, 241
               

               Conread position:
               3-283
               

               Cow position:
               chrX:27460085-27459792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               207
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               17, 245
               

               Conread position:
               3-292
               

               Cow position:
               chrX:42432297-42432580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               224
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               83, 64
               

               Conread position:
               3-309
               

               Cow position:
               chrX:38560767-38560467 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               205
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               211, 83
               

               Conread position:
               3-309
               

               Cow position:
               chrX:42855680-42855365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 261
               

               Conread position:
               3-322
               

               Cow position:
               chrX:21328131-21327802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               3-330
               

               Cow position:
               chrX:29230224-29229901 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               231
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               69, 231
               

               Conread position:
               3-336
               

               Cow position:
               chrX:46022992-46022673 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               229
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               69, 161
               

               Conread position:
               3-338
               

               Cow position:
               chrX:26881345-26881685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 36
               

               Conread position:
               3-351
               

               Cow position:
               chrX:43115366-43115021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 69
               

               Conread position:
               3-352
               

               Cow position:
               chrX:34504836-34505178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               246
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               97, 70
               

               Conread position:
               3-375
               

               Cow position:
               chrX:20584529-20584168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               377
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               218, 57
               

               Conread position:
               3-395
               

               Cow position:
               chrX:4399335-4398954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               399
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 68
               

               Conread position:
               3-396
               

               Cow position:
               chrX:6407761-6407376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               399
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 144
               

               Conread position:
               3-406
               

               Cow position:
               chrX:32821257-32820847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               420
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 183
               

               Conread position:
               3-409
               

               Cow position:
               chrX:35382825-35383205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               412
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 54
               

               Conread position:
               3-430
               

               Cow position:
               chrX:3580162-3579738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               434
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 224
               

               Conread position:
               3-439
               

               Cow position:
               chrX:46588037-46587603 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 47
               

               Conread position:
               3-440
               

               Cow position:
               chrX:36283557-36283128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               447
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 110
               

               Conread position:
               3-447
               

               Cow position:
               chrX:6488782-6488363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               450
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 58
               

               Conread position:
               3-449
               

               Cow position:
               chrX:28013223-28013665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               460
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 23
               

               Conread position:
               3-464
               

               Cow position:
               chrX:27393801-27394254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               478
               

               Alignm identity:
               362
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 20
               

               Conread position:
               3-464
               

               Cow position:
               chrX:34544003-34543547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               470
               

               Alignm identity:
               360
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 257
               

               Conread position:
               3-465
               

               Cow position:
               chrX:39938321-39938758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               465
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 60
               

               Conread position:
               3-465
               

               Cow position:
               chrX:45449127-45448646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               485
               

               Alignm identity:
               320
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               70, 263
               

               Conread position:
               3-471
               

               Cow position:
               chrX:41674314-41673855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               478
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 20
               

               Conread position:
               3-481
               

               Cow position:
               chrX:9634975-9635439 (view UCSC Genome Browser custom track)
               

               Alignm length:
               486
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 23
               

               Conread position:
               3-496
               

               Cow position:
               chrX:30922389-30921910 (view UCSC Genome Browser custom track)
               

               Alignm length:
               504
               

               Alignm identity:
               360
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 192
               

               Conread position:
               3-510
               

               Cow position:
               chrX:4268853-4269359 (view UCSC Genome Browser custom track)
               

               Alignm length:
               523
               

               Alignm identity:
               390
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 69
               

               Conread position:
               3-578
               

               Cow position:
               chrX:33855009-33855601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               606
               

               Alignm identity:
               425
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 20
               

               Conread position:
               3-617
               

               Cow position:
               chrX:42587205-42587829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               631
               

               Alignm identity:
               421
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 71
               

               Conread position:
               3-618
               

               Cow position:
               chrX:13868921-13868296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               635
               

               Alignm identity:
               492
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 85
               

               Conread position:
               3-620
               

               Cow position:
               chrX:14973540-14974139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               635
               

               Alignm identity:
               444
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 65
               

               Conread position:
               3-627
               

               Cow position:
               chrX:41123262-41122661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               637
               

               Alignm identity:
               471
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 61
               

               Conread position:
               3-629
               

               Cow position:
               chrX:161617-161016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               637
               

               Alignm identity:
               487
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 20
               

               Conread position:
               3-629
               

               Cow position:
               chrX:12250032-12249389 (view UCSC Genome Browser custom track)
               

               Alignm length:
               657
               

               Alignm identity:
               482
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 50
               

               Conread position:
               3-629
               

               Cow position:
               chrX:20339678-20340301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               639
               

               Alignm identity:
               509
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 23
               

               Conread position:
               3-629
               

               Cow position:
               chrX:27442321-27442964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               651
               

               Alignm identity:
               484
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 337
               

               Conread position:
               3-629
               

               Cow position:
               chrX:28632265-28632889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               639
               

               Alignm identity:
               450
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 216
               

               Conread position:
               3-629
               

               Cow position:
               chrX:28846675-28847294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               648
               

               Alignm identity:
               487
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 66
               

               Conread position:
               4-103
               

               Cow position:
               chrX:6856076-6855975 (view UCSC Genome Browser custom track)
               

               Alignm length:
               102
               

               Alignm identity:
               85
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               4-162
               

               Cow position:
               chrX:11813290-11813127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               4-167
               

               Cow position:
               chrX:39094117-39094273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               124
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               89, 20
               

               Conread position:
               4-168
               

               Cow position:
               chrX:10237697-10237864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               130
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               69, 85
               

               Conread position:
               4-169
               

               Cow position:
               chrX:19000343-19000174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               4-185
               

               Cow position:
               chrX:31986356-31986542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               67, 83
               

               Conread position:
               4-185
               

               Cow position:
               chrX:48822126-48822310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               69, 77
               

               Conread position:
               4-186
               

               Cow position:
               chrX:39427082-39427268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               4-189
               

               Cow position:
               chrX:32747938-32747762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               138
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               96, 19
               

               Conread position:
               4-192
               

               Cow position:
               chrX:16763714-16763902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               157
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               92, 64
               

               Conread position:
               4-203
               

               Cow position:
               chrX:20957455-20957252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               157
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               4-208
               

               Cow position:
               chrX:28837100-28836903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               69, 22
               

               Conread position:
               4-211
               

               Cow position:
               chrX:41809959-41810161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               164
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               89, 55
               

               Conread position:
               4-250
               

               Cow position:
               chrX:12219362-12219121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               171
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               68, 189
               

               Conread position:
               4-250
               

               Cow position:
               chrX:44796600-44796351 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               68, 218
               

               Conread position:
               4-277
               

               Cow position:
               chrX:1360298-1360028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               205
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               106, 69
               

               Conread position:
               4-281
               

               Cow position:
               chrX:44702849-44703134 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 214
               

               Conread position:
               4-354
               

               Cow position:
               chrX:30840757-30840423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               249
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               88, 64
               

               Conread position:
               4-369
               

               Cow position:
               chrX:27228345-27227974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 226
               

               Conread position:
               4-431
               

               Cow position:
               chrX:16996710-16996299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               437
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 238
               

               Conread position:
               4-456
               

               Cow position:
               chrX:38549662-38549216 (view UCSC Genome Browser custom track)
               

               Alignm length:
               461
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 51
               

               Conread position:
               4-496
               

               Cow position:
               chrX:8731310-8730804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               510
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 157
               

               Conread position:
               4-496
               

               Cow position:
               chrX:16762984-16762497 (view UCSC Genome Browser custom track)
               

               Alignm length:
               507
               

               Alignm identity:
               388
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 65
               

               Conread position:
               4-601
               

               Cow position:
               chrX:15597244-15596661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               606
               

               Alignm identity:
               433
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 212
               

               Conread position:
               4-618
               

               Cow position:
               chrX:10831265-10831913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               653
               

               Alignm identity:
               511
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 321
               

               Conread position:
               4-627
               

               Cow position:
               chrX:1615842-1616467 (view UCSC Genome Browser custom track)
               

               Alignm length:
               642
               

               Alignm identity:
               481
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               218, 49
               

               Conread position:
               4-627
               

               Cow position:
               chrX:45429814-45430429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               640
               

               Alignm identity:
               445
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 69
               

               Conread position:
               5-119
               

               Cow position:
               chrX:13135338-13135452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               96
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               88, 63
               

               Conread position:
               5-166
               

               Cow position:
               chrX:16770280-16770115 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               5-166
               

               Cow position:
               chrX:41011105-41010949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               88, 21
               

               Conread position:
               5-173
               

               Cow position:
               chrX:16007542-16007714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               5-179
               

               Cow position:
               chrX:13144662-13144484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               5-185
               

               Cow position:
               chrX:14925488-14925308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               67, 153
               

               Conread position:
               5-187
               

               Cow position:
               chrX:37749777-37749953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               88, 18
               

               Conread position:
               5-201
               

               Cow position:
               chrX:8642260-8642062 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               161
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               68, 128
               

               Conread position:
               5-203
               

               Cow position:
               chrX:30824200-30824001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               85, 53
               

               Conread position:
               5-219
               

               Cow position:
               chrX:46069970-46070174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               160
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               82, 67
               

               Conread position:
               5-317
               

               Cow position:
               chrX:34836857-34837150 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               223
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               88, 18
               

               Conread position:
               5-337
               

               Cow position:
               chrX:24331992-24331662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 207
               

               Conread position:
               5-339
               

               Cow position:
               chrX:5679715-5680053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               247
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               69, 161
               

               Conread position:
               5-373
               

               Cow position:
               chrX:5118283-5118654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               377
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 82
               

               Conread position:
               5-395
               

               Cow position:
               chrX:4278904-4279286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               396
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 21
               

               Conread position:
               5-401
               

               Cow position:
               chrX:47186111-47186498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               401
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 102
               

               Conread position:
               5-426
               

               Cow position:
               chrX:29544671-29545082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               427
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 22
               

               Conread position:
               5-427
               

               Cow position:
               chrX:37780897-37781321 (view UCSC Genome Browser custom track)
               

               Alignm length:
               432
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 20
               

               Conread position:
               5-454
               

               Cow position:
               chrX:42380897-42381330 (view UCSC Genome Browser custom track)
               

               Alignm length:
               457
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 18
               

               Conread position:
               5-461
               

               Cow position:
               chrX:4768943-4768513 (view UCSC Genome Browser custom track)
               

               Alignm length:
               461
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 58
               

               Conread position:
               5-464
               

               Cow position:
               chrX:32420426-32419970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               475
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 81
               

               Conread position:
               5-629
               

               Cow position:
               chrX:27705802-27705181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               642
               

               Alignm identity:
               503
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 35
               

               Conread position:
               5-629
               

               Cow position:
               chrX:34238938-34238308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               642
               

               Alignm identity:
               489
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 273
               

               Conread position:
               6-186
               

               Cow position:
               chrX:19795296-19795472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               138
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               133, 5
               

               Conread position:
               6-281
               

               Cow position:
               chrX:43150645-43150360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 259
               

               Conread position:
               6-456
               

               Cow position:
               chrX:17231951-17231502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               459
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 279
               

               Conread position:
               6-517
               

               Cow position:
               chrX:35273586-35273045 (view UCSC Genome Browser custom track)
               

               Alignm length:
               548
               

               Alignm identity:
               378
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 162
               

               Conread position:
               7-186
               

               Cow position:
               chrX:47378917-47379090 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               105, 59
               

               Conread position:
               7-189
               

               Cow position:
               chrX:48118523-48118704 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               104, 72
               

               Conread position:
               7-279
               

               Cow position:
               chrX:27511634-27511367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               206
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               89, 52
               

               Conread position:
               7-337
               

               Cow position:
               chrX:46291354-46291023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               234
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               103, 66
               

               Conread position:
               7-369
               

               Cow position:
               chrX:23562086-23561728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               270
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               61, 228
               

               Conread position:
               7-473
               

               Cow position:
               chrX:28877953-28878411 (view UCSC Genome Browser custom track)
               

               Alignm length:
               483
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 220
               

               Conread position:
               8-183
               

               Cow position:
               chrX:28850930-28850761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               84, 60
               

               Conread position:
               10-250
               

               Cow position:
               chrX:44736645-44736887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               62, 211
               

               Conread position:
               10-284
               

               Cow position:
               chrX:2674747-2675022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               62, 148
               

               Conread position:
               10-454
               

               Cow position:
               chrX:35543094-35542661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               451
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 62
               

               Conread position:
               10-456
               

               Cow position:
               chrX:36976162-36975717 (view UCSC Genome Browser custom track)
               

               Alignm length:
               454
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 182
               

               Conread position:
               10-466
               

               Cow position:
               chrX:40035229-40035693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               474
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 177
               

               Conread position:
               10-560
               

               Cow position:
               chrX:47344509-47343949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               569
               

               Alignm identity:
               406
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 280
               

               Conread position:
               10-629
               

               Cow position:
               chrX:12309175-12309798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               632
               

               Alignm identity:
               488
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 227
               

               Conread position:
               11-389
               

               Cow position:
               chrX:14275538-14275901 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               268
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               11, 58
               

               Conread position:
               13-197
               

               Cow position:
               chrX:24425794-24425982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               138
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               13-198
               

               Cow position:
               chrX:3507771-3507580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               145
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               60, 50
               

               Conread position:
               13-251
               

               Cow position:
               chrX:19660247-19660495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               60, 215
               

               Conread position:
               13-255
               

               Cow position:
               chrX:48120998-48121235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               91, 56
               

               Conread position:
               13-369
               

               Cow position:
               chrX:5305550-5305192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               230
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               60, 213
               

               Conread position:
               13-387
               

               Cow position:
               chrX:41068927-41068564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 56
               

               Conread position:
               13-455
               

               Cow position:
               chrX:22822262-22821816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               458
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 211
               

               Conread position:
               13-463
               

               Cow position:
               chrX:9361091-9360644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               456
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 102
               

               Conread position:
               13-496
               

               Cow position:
               chrX:31294362-31294815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               491
               

               Alignm identity:
               369
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 210
               

               Conread position:
               14-326
               

               Cow position:
               chrX:31515377-31515064 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               228
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               65, 41
               

               Conread position:
               14-464
               

               Cow position:
               chrX:23513801-23514258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               468
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 105
               

               Conread position:
               15-198
               

               Cow position:
               chrX:20345656-20345472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               58, 164
               

               Conread position:
               15-220
               

               Cow position:
               chrX:5512411-5512618 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               145
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               57, 88
               

               Conread position:
               15-222
               

               Cow position:
               chrX:35620910-35620699 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               15-249
               

               Cow position:
               chrX:1397830-1397596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               57, 207
               

               Conread position:
               15-249
               

               Cow position:
               chrX:43151950-43152187 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               56, 198
               

               Conread position:
               15-250
               

               Cow position:
               chrX:48474114-48473876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               53, 207
               

               Conread position:
               15-250
               

               Cow position:
               chrX:48532519-48532283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               75, 57
               

               Conread position:
               15-291
               

               Cow position:
               chrX:19965190-19965474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               57, 205
               

               Conread position:
               15-302
               

               Cow position:
               chrX:33800526-33800240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               194
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               58, 198
               

               Conread position:
               15-332
               

               Cow position:
               chrX:4991819-4992127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               57, 99
               

               Conread position:
               15-345
               

               Cow position:
               chrX:27945848-27946183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               15-400
               

               Cow position:
               chrX:47165679-47166061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               394
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 204
               

               Conread position:
               15-402
               

               Cow position:
               chrX:36061364-36060973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               394
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 199
               

               Conread position:
               15-418
               

               Cow position:
               chrX:47484057-47484466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 229
               

               Conread position:
               15-458
               

               Cow position:
               chrX:48010810-48010360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               453
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 238
               

               Conread position:
               15-568
               

               Cow position:
               chrX:46770757-46771323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               576
               

               Alignm identity:
               427
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 204
               

               Conread position:
               15-591
               

               Cow position:
               chrX:11844035-11844612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               592
               

               Alignm identity:
               441
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 259
               

               Conread position:
               15-618
               

               Cow position:
               chrX:21064487-21063896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               615
               

               Alignm identity:
               437
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 66
               

               Conread position:
               15-629
               

               Cow position:
               chrX:8900224-8899613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               625
               

               Alignm identity:
               459
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 133
               

               Conread position:
               16-394
               

               Cow position:
               chrX:14955564-14955938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 182
               

               Conread position:
               17-238
               

               Cow position:
               chrX:32574519-32574293 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               179
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               56, 38
               

               Conread position:
               17-240
               

               Cow position:
               chrX:47749952-47750175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               55, 39
               

               Conread position:
               17-629
               

               Cow position:
               chrX:1055178-1055804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               641
               

               Alignm identity:
               466
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 282
               

               Conread position:
               18-216
               

               Cow position:
               chrX:47079830-47079628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               18-348
               

               Cow position:
               chrX:34222915-34222586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 62
               

               Conread position:
               19-284
               

               Cow position:
               chrX:5063439-5063188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               194
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               54, 63
               

               Conread position:
               19-413
               

               Cow position:
               chrX:48237017-48236622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               406
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 58
               

               Conread position:
               20-319
               

               Cow position:
               chrX:40283323-40283027 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 133
               

               Conread position:
               21-216
               

               Cow position:
               chrX:24633893-24633685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               79, 51
               

               Conread position:
               21-231
               

               Cow position:
               chrX:20677948-20678152 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               74, 46
               

               Conread position:
               21-464
               

               Cow position:
               chrX:21672761-21672311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               457
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 205
               

               Conread position:
               22-396
               

               Cow position:
               chrX:169343-169698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 155
               

               Conread position:
               22-629
               

               Cow position:
               chrX:13647586-13648196 (view UCSC Genome Browser custom track)
               

               Alignm length:
               620
               

               Alignm identity:
               447
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 176
               

               Conread position:
               23-155
               

               Cow position:
               chrX:231824-231956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               104
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               77, 50
               

               Conread position:
               23-172
               

               Cow position:
               chrX:11781646-11781496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               71, 45
               

               Conread position:
               23-524
               

               Cow position:
               chrX:5919689-5919164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               532
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 50
               

               Conread position:
               24-170
               

               Cow position:
               chrX:38347118-38346969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               49, 141
               

               Conread position:
               24-220
               

               Cow position:
               chrX:26205258-26205451 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               159
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               69, 44
               

               Conread position:
               24-256
               

               Cow position:
               chrX:23188593-23188814 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               178
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               77, 45
               

               Conread position:
               24-373
               

               Cow position:
               chrX:27302073-27301717 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 121
               

               Conread position:
               24-616
               

               Cow position:
               chrX:5017215-5017805 (view UCSC Genome Browser custom track)
               

               Alignm length:
               616
               

               Alignm identity:
               447
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 146
               

               Conread position:
               26-627
               

               Cow position:
               chrX:24287739-24288323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               616
               

               Alignm identity:
               463
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 68
               

               Conread position:
               27-218
               

               Cow position:
               chrX:39180040-39180235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               161
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               27-264
               

               Cow position:
               chrX:32604875-32605123 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               27-581
               

               Cow position:
               chrX:34662653-34663224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               583
               

               Alignm identity:
               416
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 212
               

               Conread position:
               27-618
               

               Cow position:
               chrX:6414231-6413645 (view UCSC Genome Browser custom track)
               

               Alignm length:
               608
               

               Alignm identity:
               417
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 40
               

               Conread position:
               29-417
               

               Cow position:
               chrX:4515879-4515474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 44
               

               Conread position:
               29-629
               

               Cow position:
               chrX:34532709-34532119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               612
               

               Alignm identity:
               437
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 59
               

               Conread position:
               30-221
               

               Cow position:
               chrX:29733392-29733596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               161
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               30-396
               

               Cow position:
               chrX:31252598-31252245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 103
               

               Conread position:
               30-585
               

               Cow position:
               chrX:34503118-34502555 (view UCSC Genome Browser custom track)
               

               Alignm length:
               572
               

               Alignm identity:
               449
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 194
               

               Conread position:
               30-629
               

               Cow position:
               chrX:45968336-45967749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               613
               

               Alignm identity:
               434
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 45
               

               Conread position:
               37-255
               

               Cow position:
               chrX:18964642-18964861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               178
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               30, 127
               

               Conread position:
               37-464
               

               Cow position:
               chrX:16416686-16416268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               435
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 73
               

               Conread position:
               39-246
               

               Cow position:
               chrX:32318482-32318276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               173
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               55, 34
               

               Conread position:
               39-629
               

               Cow position:
               chrX:4043675-4044270 (view UCSC Genome Browser custom track)
               

               Alignm length:
               621
               

               Alignm identity:
               461
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 131
               

               Conread position:
               42-274
               

               Cow position:
               chrX:6541547-6541791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               187
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               52, 30
               

               Conread position:
               42-315
               

               Cow position:
               chrX:23113461-23113181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               207
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               61, 31
               

               Conread position:
               48-627
               

               Cow position:
               chrX:18694759-18695336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               598
               

               Alignm identity:
               459
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 110
               

               Conread position:
               49-627
               

               Cow position:
               chrX:14599704-14599126 (view UCSC Genome Browser custom track)
               

               Alignm length:
               594
               

               Alignm identity:
               458
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 107
               

               Conread position:
               53-229
               

               Cow position:
               chrX:25459564-25459746 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               47, 15
               

               Conread position:
               53-443
               

               Cow position:
               chrX:20791647-20792037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               399
               

               Alignm identity:
               258
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               18, 12
               

               Conread position:
               53-465
               

               Cow position:
               chrX:17630633-17631043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               421
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 237
               

               Conread position:
               53-533
               

               Cow position:
               chrX:25713963-25713494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               490
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 18
               

               Conread position:
               53-549
               

               Cow position:
               chrX:38006604-38007099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               507
               

               Alignm identity:
               377
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 124
               

               Conread position:
               53-571
               

               Cow position:
               chrX:28787512-28787017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               526
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 12
               

               Conread position:
               54-465
               

               Cow position:
               chrX:40789370-40788962 (view UCSC Genome Browser custom track)
               

               Alignm length:
               419
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 17
               

               Conread position:
               55-290
               

               Cow position:
               chrX:22628160-22628399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               16, 102
               

               Conread position:
               55-403
               

               Cow position:
               chrX:45099292-45098932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               251
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               48, 18
               

               Conread position:
               55-464
               

               Cow position:
               chrX:6563685-6563272 (view UCSC Genome Browser custom track)
               

               Alignm length:
               423
               

               Alignm identity:
               288
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               16, 10
               

               Conread position:
               57-275
               

               Cow position:
               chrX:32977922-32978133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               16, 105
               

               Conread position:
               57-623
               

               Cow position:
               chrX:30543120-30543693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               589
               

               Alignm identity:
               437
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 25
               

               Conread position:
               58-169
               

               Cow position:
               chrX:2742180-2742293 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               95
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               58-220
               

               Cow position:
               chrX:18046557-18046398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               129
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               43, 15
               

               Conread position:
               58-246
               

               Cow position:
               chrX:20743768-20743575 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               160
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               58-250
               

               Cow position:
               chrX:23498519-23498709 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               152
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               43, 15
               

               Conread position:
               58-282
               

               Cow position:
               chrX:41270823-41271060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               58-323
               

               Cow position:
               chrX:16348408-16348672 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 102
               

               Conread position:
               58-324
               

               Cow position:
               chrX:27119855-27119596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               15, 59
               

               Conread position:
               58-324
               

               Cow position:
               chrX:37129432-37129161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 224
               

               Conread position:
               58-360
               

               Cow position:
               chrX:616095-616401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 161
               

               Conread position:
               58-362
               

               Cow position:
               chrX:9365513-9365815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 161
               

               Conread position:
               58-365
               

               Cow position:
               chrX:11084900-11085201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 78
               

               Conread position:
               58-369
               

               Cow position:
               chrX:29680099-29680409 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 28
               

               Conread position:
               58-408
               

               Cow position:
               chrX:36068182-36067835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               251
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               15, 251
               

               Conread position:
               58-412
               

               Cow position:
               chrX:42235362-42235722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 28
               

               Conread position:
               58-414
               

               Cow position:
               chrX:23785811-23785463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 77
               

               Conread position:
               58-458
               

               Cow position:
               chrX:13382488-13382090 (view UCSC Genome Browser custom track)
               

               Alignm length:
               409
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 107
               

               Conread position:
               58-461
               

               Cow position:
               chrX:6690101-6690485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 15
               

               Conread position:
               58-464
               

               Cow position:
               chrX:618847-619248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 15
               

               Conread position:
               58-616
               

               Cow position:
               chrX:38226949-38227489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               570
               

               Alignm identity:
               421
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 19
               

               Conread position:
               58-618
               

               Cow position:
               chrX:27516681-27516133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               572
               

               Alignm identity:
               432
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 70
               

               Conread position:
               58-618
               

               Cow position:
               chrX:43730061-43730591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               567
               

               Alignm identity:
               428
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 127
               

               Conread position:
               59-227
               

               Cow position:
               chrX:42506073-42506237 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               125
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               42, 14
               

               Conread position:
               59-317
               

               Cow position:
               chrX:29549392-29549644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 14
               

               Conread position:
               59-357
               

               Cow position:
               chrX:7710380-7710679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 9
               

               Conread position:
               59-396
               

               Cow position:
               chrX:46433652-46433310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 168
               

               Conread position:
               59-600
               

               Cow position:
               chrX:7718992-7718469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               555
               

               Alignm identity:
               425
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 14
               

               Conread position:
               59-629
               

               Cow position:
               chrX:878222-878782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               582
               

               Alignm identity:
               424
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 14
               

               Conread position:
               60-351
               

               Cow position:
               chrX:6259987-6260289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               226
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               19, 13
               

               Conread position:
               60-471
               

               Cow position:
               chrX:6278337-6278753 (view UCSC Genome Browser custom track)
               

               Alignm length:
               418
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 387
               

               Conread position:
               61-608
               

               Cow position:
               chrX:34402164-34401607 (view UCSC Genome Browser custom track)
               

               Alignm length:
               565
               

               Alignm identity:
               420
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 12
               

               Conread position:
               61-627
               

               Cow position:
               chrX:17888265-17888798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               579
               

               Alignm identity:
               432
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 12
               

               Conread position:
               61-629
               

               Cow position:
               chrX:28134496-28133937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               578
               

               Alignm identity:
               428
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 70
               

               Conread position:
               62-276
               

               Cow position:
               chrX:31626820-31627038 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               165
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               39, 93
               

               Conread position:
               62-312
               

               Cow position:
               chrX:23939891-23940121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               7, 15
               

               Conread position:
               62-594
               

               Cow position:
               chrX:11717626-11718155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               545
               

               Alignm identity:
               418
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 11
               

               Conread position:
               62-628
               

               Cow position:
               chrX:42171139-42171710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               575
               

               Alignm identity:
               422
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               314, 248
               

               Conread position:
               63-220
               

               Cow position:
               chrX:21665086-21665244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               122
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               34, 10
               

               Conread position:
               63-559
               

               Cow position:
               chrX:40557520-40558018 (view UCSC Genome Browser custom track)
               

               Alignm length:
               511
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 10
               

               Conread position:
               64-363
               

               Cow position:
               chrX:22453942-22454234 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 96
               

               Conread position:
               64-364
               

               Cow position:
               chrX:11614847-11614556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 11
               

               Conread position:
               64-414
               

               Cow position:
               chrX:44656800-44657155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 145
               

               Conread position:
               64-447
               

               Cow position:
               chrX:6265442-6265809 (view UCSC Genome Browser custom track)
               

               Alignm length:
               391
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 93
               

               Conread position:
               64-496
               

               Cow position:
               chrX:37836735-37836314 (view UCSC Genome Browser custom track)
               

               Alignm length:
               440
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 85
               

               Conread position:
               64-497
               

               Cow position:
               chrX:43568077-43567671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               440
               

               Alignm identity:
               305
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               21, 157
               

               Conread position:
               64-590
               

               Cow position:
               chrX:20697454-20697977 (view UCSC Genome Browser custom track)
               

               Alignm length:
               538
               

               Alignm identity:
               411
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 17
               

               Conread position:
               65-240
               

               Cow position:
               chrX:25412059-25411886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               146
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               46, 11
               

               Conread position:
               65-298
               

               Cow position:
               chrX:4746090-4746320 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               163
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               8, 134
               

               Conread position:
               65-350
               

               Cow position:
               chrX:38728890-38728608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 142
               

               Conread position:
               65-461
               

               Cow position:
               chrX:27771814-27772193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               401
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 8
               

               Conread position:
               65-627
               

               Cow position:
               chrX:8797403-8796841 (view UCSC Genome Browser custom track)
               

               Alignm length:
               574
               

               Alignm identity:
               452
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 8
               

               Conread position:
               65-627
               

               Cow position:
               chrX:45113776-45113226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               576
               

               Alignm identity:
               426
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 16
               

               Conread position:
               67-303
               

               Cow position:
               chrX:23562786-23562551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 154
               

               Conread position:
               67-464
               

               Cow position:
               chrX:41884258-41884658 (view UCSC Genome Browser custom track)
               

               Alignm length:
               405
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 155
               

               Conread position:
               70-477
               

               Cow position:
               chrX:24259431-24259830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               412
               

               Alignm identity:
               275
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               17, 219
               

               Conread position:
               72-220
               

               Cow position:
               chrX:38725956-38725806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               122
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               22, 101
               

               Conread position:
               73-255
               

               Cow position:
               chrX:19943089-19943273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               35, 69
               

               Conread position:
               75-320
               

               Cow position:
               chrX:45883826-45884079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               190
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               22, 195
               

               Conread position:
               75-628
               

               Cow position:
               chrX:29289723-29289165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               567
               

               Alignm identity:
               437
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 145
               

               Conread position:
               76-288
               

               Cow position:
               chrX:19097076-19097291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               25, 9
               

               Conread position:
               76-290
               

               Cow position:
               chrX:22914898-22915107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               20, 138
               

               Conread position:
               76-339
               

               Cow position:
               chrX:5679428-5679684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 84
               

               Conread position:
               76-455
               

               Cow position:
               chrX:5900606-5900226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               391
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 84
               

               Conread position:
               76-455
               

               Cow position:
               chrX:32431767-32431396 (view UCSC Genome Browser custom track)
               

               Alignm length:
               385
               

               Alignm identity:
               255
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               28, 11
               

               Conread position:
               76-456
               

               Cow position:
               chrX:32623714-32623351 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               272
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               42, 205
               

               Conread position:
               76-555
               

               Cow position:
               chrX:43527652-43527164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               498
               

               Alignm identity:
               370
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 137
               

               Conread position:
               77-536
               

               Cow position:
               chrX:33640118-33639650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               478
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 125
               

               Conread position:
               78-627
               

               Cow position:
               chrX:30163146-30162596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               569
               

               Alignm identity:
               379
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 8
               

               Conread position:
               79-255
               

               Cow position:
               chrX:29553426-29553249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               22, 142
               

               Conread position:
               80-251
               

               Cow position:
               chrX:27413651-27413478 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               15, 124
               

               Conread position:
               80-282
               

               Cow position:
               chrX:15820734-15820534 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               21, 67
               

               Conread position:
               80-294
               

               Cow position:
               chrX:126907-126694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               21, 96
               

               Conread position:
               80-332
               

               Cow position:
               chrX:29194370-29194123 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               196
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               21, 67
               

               Conread position:
               80-349
               

               Cow position:
               chrX:6041069-6041342 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               183
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               26, 237
               

               Conread position:
               80-448
               

               Cow position:
               chrX:17042822-17042466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               260
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               24, 52
               

               Conread position:
               80-453
               

               Cow position:
               chrX:10959255-10959631 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 138
               

               Conread position:
               80-461
               

               Cow position:
               chrX:17662458-17662834 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 79
               

               Conread position:
               80-579
               

               Cow position:
               chrX:2786417-2786908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               513
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 54
               

               Conread position:
               80-614
               

               Cow position:
               chrX:28929975-28929454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               546
               

               Alignm identity:
               347
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               141, 25
               

               Conread position:
               80-618
               

               Cow position:
               chrX:32743673-32743137 (view UCSC Genome Browser custom track)
               

               Alignm length:
               552
               

               Alignm identity:
               385
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 57
               

               Conread position:
               80-629
               

               Cow position:
               chrX:35288795-35288242 (view UCSC Genome Browser custom track)
               

               Alignm length:
               570
               

               Alignm identity:
               394
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 99
               

               Conread position:
               81-222
               

               Cow position:
               chrX:24054816-24054666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               119
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               81-289
               

               Cow position:
               chrX:36514753-36514964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               164
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               20, 146
               

               Conread position:
               81-464
               

               Cow position:
               chrX:37119731-37119359 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 98
               

               Conread position:
               81-628
               

               Cow position:
               chrX:38071633-38072178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               558
               

               Alignm identity:
               411
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 54
               

               Conread position:
               81-629
               

               Cow position:
               chrX:11073052-11073623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               583
               

               Alignm identity:
               440
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 181
               

               Conread position:
               82-211
               

               Cow position:
               chrX:37665826-37665697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               104
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               36, 12
               

               Conread position:
               82-350
               

               Cow position:
               chrX:48044378-48044641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               200
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               18, 35
               

               Conread position:
               82-440
               

               Cow position:
               chrX:29121185-29120841 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 139
               

               Conread position:
               82-561
               

               Cow position:
               chrX:47054387-47054860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               495
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 76
               

               Conread position:
               83-455
               

               Cow position:
               chrX:37910581-37910222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 9
               

               Conread position:
               83-627
               

               Cow position:
               chrX:10411847-10412382 (view UCSC Genome Browser custom track)
               

               Alignm length:
               558
               

               Alignm identity:
               421
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 145
               

               Conread position:
               84-629
               

               Cow position:
               chrX:917232-917789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               569
               

               Alignm identity:
               430
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 120
               

               Conread position:
               84-629
               

               Cow position:
               chrX:11082486-11083026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               558
               

               Alignm identity:
               428
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 136
               

               Conread position:
               85-255
               

               Cow position:
               chrX:7806559-7806387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               85-609
               

               Cow position:
               chrX:42507513-42508035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               538
               

               Alignm identity:
               401
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 12
               

               Conread position:
               86-231
               

               Cow position:
               chrX:16830354-16830210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               8, 89
               

               Conread position:
               86-282
               

               Cow position:
               chrX:4037040-4037235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               32, 129
               

               Conread position:
               86-557
               

               Cow position:
               chrX:36778532-36778065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               484
               

               Alignm identity:
               362
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 58
               

               Conread position:
               88-434
               

               Cow position:
               chrX:7162188-7161861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               252
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               13, 71
               

               Conread position:
               88-465
               

               Cow position:
               chrX:39558217-39558591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 224
               

               Conread position:
               88-561
               

               Cow position:
               chrX:47481928-47481456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               486
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 69
               

               Conread position:
               88-629
               

               Cow position:
               chrX:37232539-37231999 (view UCSC Genome Browser custom track)
               

               Alignm length:
               552
               

               Alignm identity:
               412
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 120
               

               Conread position:
               89-465
               

               Cow position:
               chrX:1514288-1514645 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 70
               

               Conread position:
               91-460
               

               Cow position:
               chrX:15815210-15814861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 32
               

               Conread position:
               92-464
               

               Cow position:
               chrX:11454922-11455292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               387
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 39
               

               Conread position:
               92-574
               

               Cow position:
               chrX:19690342-19689858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               501
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 106
               

               Conread position:
               96-321
               

               Cow position:
               chrX:44090900-44090672 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               15, 6
               

               Conread position:
               96-365
               

               Cow position:
               chrX:48570866-48571137 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               188
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               14, 258
               

               Conread position:
               96-470
               

               Cow position:
               chrX:13322866-13323247 (view UCSC Genome Browser custom track)
               

               Alignm length:
               389
               

               Alignm identity:
               263
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               93, 204
               

               Conread position:
               96-491
               

               Cow position:
               chrX:45403703-45404104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               405
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 6
               

               Conread position:
               96-496
               

               Cow position:
               chrX:48194913-48195316 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 6
               

               Conread position:
               96-506
               

               Cow position:
               chrX:46722612-46723029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               422
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 6
               

               Conread position:
               96-507
               

               Cow position:
               chrX:44834674-44835105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               437
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 6
               

               Conread position:
               96-565
               

               Cow position:
               chrX:47967728-47967252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               484
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 15
               

               Conread position:
               96-579
               

               Cow position:
               chrX:15049611-15049110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               511
               

               Alignm identity:
               333
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               131, 33
               

               Conread position:
               96-616
               

               Cow position:
               chrX:44736878-44737390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               536
               

               Alignm identity:
               366
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 6
               

               Conread position:
               96-617
               

               Cow position:
               chrX:26625548-26626089 (view UCSC Genome Browser custom track)
               

               Alignm length:
               551
               

               Alignm identity:
               412
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 173
               

               Conread position:
               97-464
               

               Cow position:
               chrX:43049453-43049102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 63
               

               Conread position:
               98-425
               

               Cow position:
               chrX:31340828-31340502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               225
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               99, 14
               

               Conread position:
               98-458
               

               Cow position:
               chrX:11856551-11856195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 168
               

               Conread position:
               98-464
               

               Cow position:
               chrX:21004802-21004444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 14
               

               Conread position:
               98-503
               

               Cow position:
               chrX:47191292-47191677 (view UCSC Genome Browser custom track)
               

               Alignm length:
               410
               

               Alignm identity:
               282
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               70, 38
               

               Conread position:
               99-465
               

               Cow position:
               chrX:27176194-27176561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               377
               

               Alignm identity:
               257
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               8, 31
               

               Conread position:
               100-362
               

               Cow position:
               chrX:21566526-21566261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 107
               

               Conread position:
               102-298
               

               Cow position:
               chrX:46793773-46793964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               10, 117
               

               Conread position:
               105-411
               

               Cow position:
               chrX:45993340-45993031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 11
               

               Conread position:
               105-629
               

               Cow position:
               chrX:38936814-38936279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               546
               

               Alignm identity:
               400
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 72
               

               Conread position:
               109-464
               

               Cow position:
               chrX:29032518-29032177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               237
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               98, 22
               

               Conread position:
               110-389
               

               Cow position:
               chrX:30263365-30263087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               202
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               65, 122
               

               Conread position:
               110-629
               

               Cow position:
               chrX:7572012-7571491 (view UCSC Genome Browser custom track)
               

               Alignm length:
               533
               

               Alignm identity:
               397
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 113
               

               Conread position:
               112-421
               

               Cow position:
               chrX:40809798-40809489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 99
               

               Conread position:
               112-430
               

               Cow position:
               chrX:46315269-46315587 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               227
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               56, 28
               

               Conread position:
               112-464
               

               Cow position:
               chrX:22624581-22624241 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 158
               

               Conread position:
               112-516
               

               Cow position:
               chrX:488609-488197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               419
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 184
               

               Conread position:
               113-462
               

               Cow position:
               chrX:27680502-27680165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 162
               

               Conread position:
               114-388
               

               Cow position:
               chrX:23254102-23254378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               182
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               174, 21
               

               Conread position:
               115-627
               

               Cow position:
               chrX:44873459-44873944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               515
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               323, 42
               

               Conread position:
               117-361
               

               Cow position:
               chrX:27685349-27685107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 107
               

               Conread position:
               117-497
               

               Cow position:
               chrX:2467984-2467604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 94
               

               Conread position:
               121-464
               

               Cow position:
               chrX:40692655-40692978 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               235
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               309, 164
               

               Conread position:
               121-629
               

               Cow position:
               chrX:26440689-26441192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               518
               

               Alignm identity:
               403
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               255, 43
               

               Conread position:
               123-391
               

               Cow position:
               chrX:10129102-10128837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               252, 95
               

               Conread position:
               123-629
               

               Cow position:
               chrX:21833983-21833473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               516
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               252, 114
               

               Conread position:
               126-576
               

               Cow position:
               chrX:37843808-37843361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               460
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               181, 13
               

               Conread position:
               127-397
               

               Cow position:
               chrX:22466046-22465782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               16, 170
               

               Conread position:
               129-309
               

               Cow position:
               chrX:1572051-1572227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               129-373
               

               Cow position:
               chrX:12405293-12405539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               180, 0
               

               Conread position:
               130-526
               

               Cow position:
               chrX:20710161-20709767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               402
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               243, 74
               

               Conread position:
               131-356
               

               Cow position:
               chrX:27416146-27415932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               24, 89
               

               Conread position:
               133-348
               

               Cow position:
               chrX:16055291-16055084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               157
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               133-422
               

               Cow position:
               chrX:43973629-43973360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               89, 70
               

               Conread position:
               134-618
               

               Cow position:
               chrX:13785280-13785779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               505
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 22
               

               Conread position:
               136-292
               

               Cow position:
               chrX:21004800-21004957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               42, 7
               

               Conread position:
               136-347
               

               Cow position:
               chrX:19003374-19003174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               136-455
               

               Cow position:
               chrX:14900652-14900952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               240, 41
               

               Conread position:
               138-294
               

               Cow position:
               chrX:13136153-13136307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               120
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               138-460
               

               Cow position:
               chrX:11589509-11589828 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               282, 85
               

               Conread position:
               140-461
               

               Cow position:
               chrX:40116491-40116188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               140-629
               

               Cow position:
               chrX:42584997-42585475 (view UCSC Genome Browser custom track)
               

               Alignm length:
               501
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 87
               

               Conread position:
               143-467
               

               Cow position:
               chrX:678481-678811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 125
               

               Conread position:
               144-397
               

               Cow position:
               chrX:46146488-46146734 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               168
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               231, 142
               

               Conread position:
               144-550
               

               Cow position:
               chrX:6234376-6234766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               415
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 168
               

               Conread position:
               147-344
               

               Cow position:
               chrX:20790983-20790798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               146
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               148-410
               

               Cow position:
               chrX:48035494-48035241 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               190
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               142, 70
               

               Conread position:
               149-392
               

               Cow position:
               chrX:23667194-23666954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               69, 53
               

               Conread position:
               152-532
               

               Cow position:
               chrX:19188996-19188622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               389
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               224, 60
               

               Conread position:
               153-365
               

               Cow position:
               chrX:32215266-32215053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               25, 77
               

               Conread position:
               153-537
               

               Cow position:
               chrX:12018356-12017964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               404
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               174, 73
               

               Conread position:
               153-547
               

               Cow position:
               chrX:34270466-34270090 (view UCSC Genome Browser custom track)
               

               Alignm length:
               395
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               153-627
               

               Cow position:
               chrX:48243403-48243862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               483
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               265, 7
               

               Conread position:
               154-507
               

               Cow position:
               chrX:35042281-35041933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               171, 59
               

               Conread position:
               156-430
               

               Cow position:
               chrX:36961702-36961429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               158, 60
               

               Conread position:
               156-565
               

               Cow position:
               chrX:25232654-25232238 (view UCSC Genome Browser custom track)
               

               Alignm length:
               425
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 62
               

               Conread position:
               156-627
               

               Cow position:
               chrX:35610053-35609576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               482
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 156
               

               Conread position:
               157-288
               

               Cow position:
               chrX:17301246-17301378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               157-344
               

               Cow position:
               chrX:9155321-9155131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               140
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               67, 60
               

               Conread position:
               157-440
               

               Cow position:
               chrX:2186314-2186041 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               196
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               219, 127
               

               Conread position:
               157-462
               

               Cow position:
               chrX:41166902-41167202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               219, 154
               

               Conread position:
               158-628
               

               Cow position:
               chrX:24886430-24886899 (view UCSC Genome Browser custom track)
               

               Alignm length:
               486
               

               Alignm identity:
               309
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               127, 53
               

               Conread position:
               161-307
               

               Cow position:
               chrX:42789677-42789533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               7, 58
               

               Conread position:
               161-629
               

               Cow position:
               chrX:10437611-10438063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               478
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               142, 65
               

               Conread position:
               162-464
               

               Cow position:
               chrX:9855353-9855060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               214, 55
               

               Conread position:
               162-497
               

               Cow position:
               chrX:157717-158045 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               239
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               67, 61
               

               Conread position:
               162-540
               

               Cow position:
               chrX:28845888-28845521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               389
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 56
               

               Conread position:
               162-629
               

               Cow position:
               chrX:16789803-16790229 (view UCSC Genome Browser custom track)
               

               Alignm length:
               470
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               365, 15
               

               Conread position:
               162-629
               

               Cow position:
               chrX:37133475-37133946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               481
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 47
               

               Conread position:
               163-325
               

               Cow position:
               chrX:29487954-29488106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               163-465
               

               Cow position:
               chrX:30862370-30862061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               62, 177
               

               Conread position:
               163-590
               

               Cow position:
               chrX:28105972-28105553 (view UCSC Genome Browser custom track)
               

               Alignm length:
               433
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               212, 54
               

               Conread position:
               164-464
               

               Cow position:
               chrX:9954192-9953901 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               211, 53
               

               Conread position:
               165-496
               

               Cow position:
               chrX:42875035-42874703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               145, 53
               

               Conread position:
               165-629
               

               Cow position:
               chrX:42461692-42462160 (view UCSC Genome Browser custom track)
               

               Alignm length:
               476
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               211, 59
               

               Conread position:
               166-627
               

               Cow position:
               chrX:35681393-35680934 (view UCSC Genome Browser custom track)
               

               Alignm length:
               481
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               148, 60
               

               Conread position:
               167-516
               

               Cow position:
               chrX:19015487-19015144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 88
               

               Conread position:
               167-617
               

               Cow position:
               chrX:42994663-42994214 (view UCSC Genome Browser custom track)
               

               Alignm length:
               460
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               209, 51
               

               Conread position:
               167-629
               

               Cow position:
               chrX:15139497-15139961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               478
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               249, 57
               

               Conread position:
               167-629
               

               Cow position:
               chrX:40452168-40452633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               480
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               208, 45
               

               Conread position:
               168-487
               

               Cow position:
               chrX:41199155-41198845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               142, 49
               

               Conread position:
               169-481
               

               Cow position:
               chrX:20752303-20752007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 50
               

               Conread position:
               172-537
               

               Cow position:
               chrX:28157543-28157168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               385
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               139, 15
               

               Conread position:
               172-629
               

               Cow position:
               chrX:11581979-11581525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               473
               

               Alignm identity:
               367
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 52
               

               Conread position:
               172-629
               

               Cow position:
               chrX:17498130-17497684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               466
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               248, 74
               

               Conread position:
               173-496
               

               Cow position:
               chrX:9997289-9997606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 51
               

               Conread position:
               174-328
               

               Cow position:
               chrX:35848607-35848454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               52, 27
               

               Conread position:
               174-357
               

               Cow position:
               chrX:31986819-31987003 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               7, 27
               

               Conread position:
               174-370
               

               Cow position:
               chrX:36723046-36723240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               148
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               174-396
               

               Cow position:
               chrX:37750211-37750426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               173
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               47, 64
               

               Conread position:
               174-397
               

               Cow position:
               chrX:29563326-29563544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               37, 86
               

               Conread position:
               174-422
               

               Cow position:
               chrX:4091683-4091449 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               192
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               132, 45
               

               Conread position:
               174-436
               

               Cow position:
               chrX:8039859-8039597 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               190
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               153, 49
               

               Conread position:
               174-441
               

               Cow position:
               chrX:28835859-28836122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               201
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               47, 113
               

               Conread position:
               174-449
               

               Cow position:
               chrX:29509395-29509669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 37
               

               Conread position:
               174-498
               

               Cow position:
               chrX:40648029-40647701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               168, 42
               

               Conread position:
               174-539
               

               Cow position:
               chrX:14925043-14924679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               246, 31
               

               Conread position:
               175-619
               

               Cow position:
               chrX:47379425-47379869 (view UCSC Genome Browser custom track)
               

               Alignm length:
               461
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 48
               

               Conread position:
               176-433
               

               Cow position:
               chrX:26286022-26285771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 88
               

               Conread position:
               177-465
               

               Cow position:
               chrX:47756888-47757170 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               137, 49
               

               Conread position:
               177-627
               

               Cow position:
               chrX:32127952-32128404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               472
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               286, 47
               

               Conread position:
               177-629
               

               Cow position:
               chrX:12116087-12115629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               465
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 35
               

               Conread position:
               179-414
               

               Cow position:
               chrX:45875036-45874808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               173
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               196, 55
               

               Conread position:
               179-497
               

               Cow position:
               chrX:23497628-23497936 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 40
               

               Conread position:
               179-591
               

               Cow position:
               chrX:41743952-41743539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               421
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               197, 132
               

               Conread position:
               180-627
               

               Cow position:
               chrX:3653798-3653355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               457
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               244, 106
               

               Conread position:
               180-627
               

               Cow position:
               chrX:45412624-45413061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               454
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               240, 46
               

               Conread position:
               181-406
               

               Cow position:
               chrX:14003610-14003828 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               174
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               195, 37
               

               Conread position:
               181-432
               

               Cow position:
               chrX:10123317-10123552 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               193, 37
               

               Conread position:
               182-422
               

               Cow position:
               chrX:17908253-17908482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               194, 42
               

               Conread position:
               182-465
               

               Cow position:
               chrX:30832817-30833079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               194, 36
               

               Conread position:
               183-492
               

               Cow position:
               chrX:10096066-10095755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               222
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               89, 116
               

               Conread position:
               183-629
               

               Cow position:
               chrX:38439515-38439064 (view UCSC Genome Browser custom track)
               

               Alignm length:
               458
               

               Alignm identity:
               360
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 128
               

               Conread position:
               184-454
               

               Cow position:
               chrX:37048548-37048811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               204
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               191, 26
               

               Conread position:
               184-456
               

               Cow position:
               chrX:2383518-2383257 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               203
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               159, 33
               

               Conread position:
               187-439
               

               Cow position:
               chrX:45015606-45015369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               182
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               237, 41
               

               Conread position:
               194-389
               

               Cow position:
               chrX:36314272-36314464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               143
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               111, 18
               

               Conread position:
               197-561
               

               Cow position:
               chrX:32747703-32747314 (view UCSC Genome Browser custom track)
               

               Alignm length:
               395
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 17
               

               Conread position:
               204-466
               

               Cow position:
               chrX:35284638-35284375 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 110
               

               Conread position:
               204-474
               

               Cow position:
               chrX:42338936-42339186 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               205
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               171, 20
               

               Conread position:
               207-410
               

               Cow position:
               chrX:31256877-31256681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               210-413
               

               Cow position:
               chrX:1505718-1505523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               152
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               165, 43
               

               Conread position:
               218-578
               

               Cow position:
               chrX:11806012-11806377 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 92
               

               Conread position:
               219-615
               

               Cow position:
               chrX:19019105-19019490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               404
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 111
               

               Conread position:
               226-465
               

               Cow position:
               chrX:42282421-42282195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               171
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               227-561
               

               Cow position:
               chrX:41403971-41403617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 209
               

               Conread position:
               227-561
               

               Cow position:
               chrX:41410519-41410165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 209
               

               Conread position:
               227-627
               

               Cow position:
               chrX:21665602-21666001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               245, 20
               

               Conread position:
               228-629
               

               Cow position:
               chrX:35387911-35388319 (view UCSC Genome Browser custom track)
               

               Alignm length:
               412
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               148, 82
               

               Conread position:
               234-451
               

               Cow position:
               chrX:48684239-48684450 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               161
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               15, 120
               

               Conread position:
               236-518
               

               Cow position:
               chrX:33020467-33020186 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 49
               

               Conread position:
               239-464
               

               Cow position:
               chrX:25411821-25411600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               128, 83
               

               Conread position:
               239-629
               

               Cow position:
               chrX:38967628-38967239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               398
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               181, 64
               

               Conread position:
               242-382
               

               Cow position:
               chrX:41764623-41764481 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               82, 69
               

               Conread position:
               249-464
               

               Cow position:
               chrX:2206581-2206784 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               125, 9
               

               Conread position:
               254-464
               

               Cow position:
               chrX:46984526-46984742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               156
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               60, 85
               

               Conread position:
               258-393
               

               Cow position:
               chrX:41271246-41271377 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               108
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               118, 53
               

               Conread position:
               261-629
               

               Cow position:
               chrX:4123796-4123424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 97
               

               Conread position:
               264-591
               

               Cow position:
               chrX:7382289-7381952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 98
               

               Conread position:
               269-448
               

               Cow position:
               chrX:16324014-16324187 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               107, 67
               

               Conread position:
               269-456
               

               Cow position:
               chrX:6640080-6639892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               36, 101
               

               Conread position:
               269-527
               

               Cow position:
               chrX:23061396-23061145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               204
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               151, 34
               
Show alignments to all cow chromosomes.
Conread position:	1-103
Cow position:	chrX:19161911-19162015 (view UCSC Genome Browser custom track)
Alignm length:	105
Alignm identity:	89
Alignm E-value:	1e-23
Alignm gaps (pig, cow):	72, 0
Conread position:	1-109
Cow position:	chrX:42216414-42216520 (view UCSC Genome Browser custom track)
Alignm length:	109
Alignm identity:	90
Alignm E-value:	1e-22
Alignm gaps (pig, cow):	62, 0
Conread position:	1-121
Cow position:	chrX:42159161-42159037 (view UCSC Genome Browser custom track)
Alignm length:	125
Alignm identity:	100
Alignm E-value:	3e-23
Alignm gaps (pig, cow):	72, 0
Conread position:	1-125
Cow position:	chrX:10479969-10479841 (view UCSC Genome Browser custom track)
Alignm length:	129
Alignm identity:	106
Alignm E-value:	5e-27
Alignm gaps (pig, cow):	72, 0
Conread position:	1-131
Cow position:	chrX:1996232-1996366 (view UCSC Genome Browser custom track)
Alignm length:	135
Alignm identity:	113
Alignm E-value:	8e-31
Alignm gaps (pig, cow):	72, 0
Conread position:	1-135
Cow position:	chrX:43028448-43028314 (view UCSC Genome Browser custom track)
Alignm length:	138
Alignm identity:	109
Alignm E-value:	4e-24
Alignm gaps (pig, cow):	99, 71
Conread position:	1-136
Cow position:	chrX:42314672-42314811 (view UCSC Genome Browser custom track)
Alignm length:	140
Alignm identity:	110
Alignm E-value:	1e-25
Alignm gaps (pig, cow):	76, 0
Conread position:	1-138
Cow position:	chrX:31279708-31279845 (view UCSC Genome Browser custom track)
Alignm length:	141
Alignm identity:	115
Alignm E-value:	2e-28
Alignm gaps (pig, cow):	99, 58
Conread position:	1-139
Cow position:	chrX:37717941-37717800 (view UCSC Genome Browser custom track)
Alignm length:	143
Alignm identity:	119
Alignm E-value:	9e-32
Alignm gaps (pig, cow):	71, 132
Conread position:	1-141
Cow position:	chrX:11670906-11670762 (view UCSC Genome Browser custom track)
Alignm length:	145
Alignm identity:	113
Alignm E-value:	5e-26
Alignm gaps (pig, cow):	71, 0
Conread position:	1-143
Cow position:	chrX:42506727-42506875 (view UCSC Genome Browser custom track)
Alignm length:	149
Alignm identity:	120
Alignm E-value:	2e-29
Alignm gaps (pig, cow):	72, 0
Conread position:	1-146
Cow position:	chrX:25420543-25420402 (view UCSC Genome Browser custom track)
Alignm length:	151
Alignm identity:	117
Alignm E-value:	8e-21
Alignm gaps (pig, cow):	14, 63
Conread position:	1-147
Cow position:	chrX:30789310-30789461 (view UCSC Genome Browser custom track)
Alignm length:	152
Alignm identity:	117
Alignm E-value:	1e-25
Alignm gaps (pig, cow):	72, 0
Conread position:	1-150
Cow position:	chrX:41215542-41215389 (view UCSC Genome Browser custom track)
Alignm length:	154
Alignm identity:	123
Alignm E-value:	3e-31
Alignm gaps (pig, cow):	72, 0
Conread position:	1-151
Cow position:	chrX:34193861-34194015 (view UCSC Genome Browser custom track)
Alignm length:	155
Alignm identity:	118
Alignm E-value:	1e-25
Alignm gaps (pig, cow):	72, 0
Conread position:	1-152
Cow position:	chrX:12197289-12197133 (view UCSC Genome Browser custom track)
Alignm length:	159
Alignm identity:	122
Alignm E-value:	4e-24
Alignm gaps (pig, cow):	71, 25
Conread position:	1-153
Cow position:	chrX:3494831-3494981 (view UCSC Genome Browser custom track)
Alignm length:	156
Alignm identity:	123
Alignm E-value:	2e-27
Alignm gaps (pig, cow):	99, 71
Conread position:	1-154
Cow position:	chrX:11529557-11529406 (view UCSC Genome Browser custom track)
Alignm length:	157
Alignm identity:	118
Alignm E-value:	3e-23
Alignm gaps (pig, cow):	99, 75
Conread position:	1-155
Cow position:	chrX:16801048-16801201 (view UCSC Genome Browser custom track)
Alignm length:	159
Alignm identity:	127
Alignm E-value:	2e-29
Alignm gaps (pig, cow):	78, 25
Conread position:	1-158
Cow position:	chrX:11602268-11602424 (view UCSC Genome Browser custom track)
Alignm length:	162
Alignm identity:	124
Alignm E-value:	4e-24
Alignm gaps (pig, cow):	72, 22