• Home
• Research
• Resources
• Publications
• About
• People
• Events
• Jobs
• News
• Contact

Cow genome map

           
Conread name:
           
rnje10c_n3.y1
        

               
Conread position:
               
2-221
               

               
Cow position:
               
chr11:67804222-67804009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
103, 95
               

               
Conread position:
               
2-248
               

               
Cow position:
               
chr11:10875214-10874951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
2-327
               

               
Cow position:
               
chr11:49099208-49099553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
75, 28
               

               
Conread position:
               
2-343
               

               
Cow position:
               
chr11:34841705-34842064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
103, 95
               

               
Conread position:
               
2-352
               

               
Cow position:
               
chr11:24601447-24601075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
146, 0
               

               
Conread position:
               
2-377
               

               
Cow position:
               
chr11:42373236-42372855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
68, 89
               

               
Conread position:
               
2-382
               

               
Cow position:
               
chr11:40133358-40133751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
102, 33
               

               
Conread position:
               
2-388
               

               
Cow position:
               
chr11:79995312-79995712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
82, 249
               

               
Conread position:
               
2-403
               

               
Cow position:
               
chr11:75195701-75196119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 95
               

               
Conread position:
               
2-403
               

               
Cow position:
               
chr11:81337476-81337880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 64
               

               
Conread position:
               
2-411
               

               
Cow position:
               
chr11:75360396-75360823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
146, 70
               

               
Conread position:
               
2-413
               

               
Cow position:
               
chr11:68130829-68130416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
146, 93
               

               
Conread position:
               
2-417
               

               
Cow position:
               
chr11:80591783-80591367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
144, 60
               

               
Conread position:
               
2-418
               

               
Cow position:
               
chr11:31235962-31236390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
146, 109
               

               
Conread position:
               
2-419
               

               
Cow position:
               
chr11:43431183-43431589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
338, 41
               

               
Conread position:
               
2-420
               

               
Cow position:
               
chr11:15279381-15279799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 242
               

               
Conread position:
               
2-422
               

               
Cow position:
               
chr11:1504552-1504991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 376
               

               
Conread position:
               
2-422
               

               
Cow position:
               
chr11:12118693-12118247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
45, 95
               

               
Conread position:
               
2-426
               

               
Cow position:
               
chr11:53773109-53772681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
103, 95
               

               
Conread position:
               
2-429
               

               
Cow position:
               
chr11:48484635-48485077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 252
               

               
Conread position:
               
2-442
               

               
Cow position:
               
chr11:70601841-70602299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 95
               

               
Conread position:
               
2-460
               

               
Cow position:
               
chr11:5482003-5482478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 257
               

               
Conread position:
               
2-460
               

               
Cow position:
               
chr11:25565190-25564720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 239
               

               
Conread position:
               
2-460
               

               
Cow position:
               
chr11:70424833-70424358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 256
               

               
Conread position:
               
2-465
               

               
Cow position:
               
chr11:17781601-17782063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 61
               

               
Conread position:
               
2-466
               

               
Cow position:
               
chr11:44870962-44870482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 257
               

               
Conread position:
               
2-469
               

               
Cow position:
               
chr11:11991441-11990957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 48
               

               
Conread position:
               
2-469
               

               
Cow position:
               
chr11:12316619-12317110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 383
               

               
Conread position:
               
2-469
               

               
Cow position:
               
chr11:12353449-12353932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 257
               

               
Conread position:
               
2-469
               

               
Cow position:
               
chr11:19099045-19099525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 95
               

               
Conread position:
               
2-469
               

               
Cow position:
               
chr11:41167251-41167734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 95
               

               
Conread position:
               
2-469
               

               
Cow position:
               
chr11:41599250-41599728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 266
               

               
Conread position:
               
2-469
               

               
Cow position:
               
chr11:44107120-44106641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 64
               

               
Conread position:
               
2-469
               

               
Cow position:
               
chr11:52297719-52298203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 462
               

               
Conread position:
               
2-469
               

               
Cow position:
               
chr11:59872248-59871775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 102
               

               
Conread position:
               
2-469
               

               
Cow position:
               
chr11:67848528-67849012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
153, 53
               

               
Conread position:
               
2-480
               

               
Cow position:
               
chr11:23883774-23883292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 157
               

               
Conread position:
               
2-480
               

               
Cow position:
               
chr11:26067686-26068169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 32
               

               
Conread position:
               
2-480
               

               
Cow position:
               
chr11:30700925-30700439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 61
               

               
Conread position:
               
2-482
               

               
Cow position:
               
chr11:41093432-41093917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 52
               

               
Conread position:
               
2-484
               

               
Cow position:
               
chr11:71332942-71332443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 257
               

               
Conread position:
               
2-506
               

               
Cow position:
               
chr11:25184414-25183891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 193
               

               
Conread position:
               
2-512
               

               
Cow position:
               
chr11:20601756-20601238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
74, 108
               

               
Conread position:
               
2-586
               

               
Cow position:
               
chr11:4060533-4061122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
610
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 45
               

               
Conread position:
               
2-654
               

               
Cow position:
               
chr11:33601196-33601880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
692
               

               
Alignm identity:
               
487
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 257
               

               
Conread position:
               
2-660
               

               
Cow position:
               
chr11:36930092-36930777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
694
               

               
Alignm identity:
               
467
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 67
               

               
Conread position:
               
2-660
               

               
Cow position:
               
chr11:44153640-44154336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
703
               

               
Alignm identity:
               
483
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 257
               

               
Conread position:
               
2-660
               

               
Cow position:
               
chr11:85390422-85391105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
693
               

               
Alignm identity:
               
470
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 53
               

               
Conread position:
               
2-662
               

               
Cow position:
               
chr11:53307466-53308156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
704
               

               
Alignm identity:
               
471
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 28
               

               
Conread position:
               
2-663
               

               
Cow position:
               
chr11:9222244-9222884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
674
               

               
Alignm identity:
               
435
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 60
               

               
Conread position:
               
2-663
               

               
Cow position:
               
chr11:18920156-18920847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
699
               

               
Alignm identity:
               
485
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 64
               

               
Conread position:
               
3-285
               

               
Cow position:
               
chr11:23773696-23773400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
103, 94
               

               
Conread position:
               
3-388
               

               
Cow position:
               
chr11:52127548-52127950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
102, 94
               

               
Conread position:
               
3-459
               

               
Cow position:
               
chr11:76767852-76767386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 236
               

               
Conread position:
               
3-460
               

               
Cow position:
               
chr11:2309362-2308881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 94
               

               
Conread position:
               
3-469
               

               
Cow position:
               
chr11:23495194-23494712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 359
               

               
Conread position:
               
3-469
               

               
Cow position:
               
chr11:46780628-46781109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 256
               

               
Conread position:
               
4-437
               

               
Cow position:
               
chr11:35737919-35738355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 144
               

               
Conread position:
               
4-438
               

               
Cow position:
               
chr11:39152030-39151585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 57
               

               
Conread position:
               
5-351
               

               
Cow position:
               
chr11:42366993-42366637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
138, 25
               

               
Conread position:
               
6-429
               

               
Cow position:
               
chr11:34458213-34457791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
176, 82
               

               
Conread position:
               
7-430
               

               
Cow position:
               
chr11:28394502-28394067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 81
               

               
Conread position:
               
9-670
               

               
Cow position:
               
chr11:62873289-62873966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
697
               

               
Alignm identity:
               
452
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 35
               

               
Conread position:
               
11-422
               

               
Cow position:
               
chr11:73798272-73798696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
136, 92
               

               
Conread position:
               
11-469
               

               
Cow position:
               
chr11:35541643-35542108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 241
               

               
Conread position:
               
17-422
               

               
Cow position:
               
chr11:15047885-15047464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 80
               

               
Conread position:
               
17-428
               

               
Cow position:
               
chr11:11319160-11319561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
167, 80
               

               
Conread position:
               
17-469
               

               
Cow position:
               
chr11:27724480-27724941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
88, 38
               

               
Conread position:
               
17-671
               

               
Cow position:
               
chr11:15495815-15495121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
703
               

               
Alignm identity:
               
464
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 10
               

               
Conread position:
               
18-364
               

               
Cow position:
               
chr11:70016711-70016348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
41, 35
               

               
Conread position:
               
18-373
               

               
Cow position:
               
chr11:44356461-44356833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
89, 79
               

               
Conread position:
               
18-377
               

               
Cow position:
               
chr11:13224642-13224270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
130, 241
               

               
Conread position:
               
18-383
               

               
Cow position:
               
chr11:70977965-70978348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
87, 79
               

               
Conread position:
               
18-385
               

               
Cow position:
               
chr11:10043671-10043287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
129, 379
               

               
Conread position:
               
18-419
               

               
Cow position:
               
chr11:4023930-4024347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 87
               

               
Conread position:
               
18-422
               

               
Cow position:
               
chr11:2293633-2294055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
87, 79
               

               
Conread position:
               
18-422
               

               
Cow position:
               
chr11:2800833-2801254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 79
               

               
Conread position:
               
18-422
               

               
Cow position:
               
chr11:4596994-4596572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 79
               

               
Conread position:
               
18-422
               

               
Cow position:
               
chr11:4734710-4734288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 79
               

               
Conread position:
               
18-422
               

               
Cow position:
               
chr11:7152423-7152005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 79
               

               
Conread position:
               
18-422
               

               
Cow position:
               
chr11:8366987-8366565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
89, 79
               

               
Conread position:
               
18-422
               

               
Cow position:
               
chr11:10100475-10100053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 79
               

               
Conread position:
               
18-422
               

               
Cow position:
               
chr11:10698322-10698741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
89, 29
               

               
Conread position:
               
18-422
               

               
Cow position:
               
chr11:10871398-10871820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 79
               

               
Conread position:
               
18-422
               

               
Cow position:
               
chr11:11315402-11315824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
89, 79
               

               
Conread position:
               
18-422
               

               
Cow position:
               
chr11:16547523-16547945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
87, 79
               

               
Conread position:
               
18-422
               

               
Cow position:
               
chr11:17549585-17549163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
88, 79
               

               
Conread position:
               
18-422
               

               
Cow position:
               
chr11:17854521-17854099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 79
               

               
Conread position:
               
18-422
               

               
Cow position:
               
chr11:20285191-20285613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 79
               

               
Conread position:
               
18-422
               

               
Cow position:
               
chr11:22617519-22617941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
88, 79
               

               
Conread position:
               
18-422
               

               
Cow position:
               
chr11:24333566-24333988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 79
               

               
Conread position:
               
18-422
               

               
Cow position:
               
chr11:24396971-24397393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 79
               

               
Conread position:
               
18-422
               

               
Cow position:
               
chr11:26592351-26592772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 85
               

               
Conread position:
               
18-422
               

               
Cow position:
               
chr11:30088303-30087881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 79
               

               
Conread position:
               
18-422
               

               
Cow position:
               
chr11:30777390-30776968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 79
               

               
Conread position:
               
18-422
               

               
Cow position:
               
chr11:33001299-33000884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 242
               

               
Conread position:
               
18-422
               

               
Cow position:
               
chr11:46142562-46142981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 79
               

               
Conread position:
               
18-422
               

               
Cow position:
               
chr11:47573109-47573531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 79
               

               
Conread position:
               
18-422
               

               
Cow position:
               
chr11:50281979-50282405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
73, 363
               

               
Conread position:
               
18-422
               

               
Cow position:
               
chr11:54302964-54302542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 79
               

               
Conread position:
               
18-422
               

               
Cow position:
               
chr11:61397194-61397616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
18, 9
               

               
Conread position:
               
18-422
               

               
Cow position:
               
chr11:66663993-66664414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
89, 79
               

               
Conread position:
               
18-422
               

               
Cow position:
               
chr11:72369478-72369059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
122, 356
               

               
Conread position:
               
18-439
               

               
Cow position:
               
chr11:1625739-1626171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
66, 54
               

               
Conread position:
               
18-442
               

               
Cow position:
               
chr11:49935322-49935764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 32
               

               
Conread position:
               
18-459
               

               
Cow position:
               
chr11:62009374-62009832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 79
               

               
Conread position:
               
18-460
               

               
Cow position:
               
chr11:31836610-31836152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 28
               

               
Conread position:
               
18-460
               

               
Cow position:
               
chr11:75710826-75711285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 79
               

               
Conread position:
               
18-460
               

               
Cow position:
               
chr11:77745785-77746239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
130, 21
               

               
Conread position:
               
18-469
               

               
Cow position:
               
chr11:417072-417513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
170, 17
               

               
Conread position:
               
18-469
               

               
Cow position:
               
chr11:12178515-12178048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 79
               

               
Conread position:
               
18-469
               

               
Cow position:
               
chr11:13087240-13087707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 241
               

               
Conread position:
               
18-469
               

               
Cow position:
               
chr11:15988723-15988248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
129, 93
               

               
Conread position:
               
18-469
               

               
Cow position:
               
chr11:38574058-38574525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 79
               

               
Conread position:
               
18-469
               

               
Cow position:
               
chr11:38599287-38599754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 79
               

               
Conread position:
               
18-469
               

               
Cow position:
               
chr11:41314722-41314256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 79
               

               
Conread position:
               
18-469
               

               
Cow position:
               
chr11:52846902-52846435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 79
               

               
Conread position:
               
18-469
               

               
Cow position:
               
chr11:54304330-54303861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 79
               

               
Conread position:
               
18-469
               

               
Cow position:
               
chr11:75256617-75256150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 79
               

               
Conread position:
               
18-651
               

               
Cow position:
               
chr11:65760180-65760856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
681
               

               
Alignm identity:
               
439
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 79
               

               
Conread position:
               
18-653
               

               
Cow position:
               
chr11:51034703-51034038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
675
               

               
Alignm identity:
               
444
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 79
               

               
Conread position:
               
18-659
               

               
Cow position:
               
chr11:25760171-25759496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
680
               

               
Alignm identity:
               
465
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 314
               

               
Conread position:
               
18-660
               

               
Cow position:
               
chr11:6343886-6343203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
690
               

               
Alignm identity:
               
454
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 79
               

               
Conread position:
               
18-660
               

               
Cow position:
               
chr11:84967535-84966856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
686
               

               
Alignm identity:
               
462
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 359
               

               
Conread position:
               
18-663
               

               
Cow position:
               
chr11:14469927-14469268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
680
               

               
Alignm identity:
               
458
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 21
               

               
Conread position:
               
18-663
               

               
Cow position:
               
chr11:17104279-17104950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
680
               

               
Alignm identity:
               
468
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 287
               

               
Conread position:
               
18-671
               

               
Cow position:
               
chr11:9432801-9432157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
678
               

               
Alignm identity:
               
453
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 95
               

               
Conread position:
               
18-671
               

               
Cow position:
               
chr11:20730796-20731491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
703
               

               
Alignm identity:
               
469
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 79
               

               
Conread position:
               
18-671
               

               
Cow position:
               
chr11:34638077-34638773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
701
               

               
Alignm identity:
               
462
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 79
               

               
Conread position:
               
18-671
               

               
Cow position:
               
chr11:63390055-63390748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
697
               

               
Alignm identity:
               
463
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 359
               

               
Conread position:
               
18-671
               

               
Cow position:
               
chr11:67919915-67920601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
695
               

               
Alignm identity:
               
462
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 79
               

               
Conread position:
               
19-429
               

               
Cow position:
               
chr11:20451403-20451019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
310, 20
               

               
Conread position:
               
21-365
               

               
Cow position:
               
chr11:41178375-41178012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
22, 62
               

               
Conread position:
               
21-422
               

               
Cow position:
               
chr11:28125937-28125520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 351
               

               
Conread position:
               
21-422
               

               
Cow position:
               
chr11:31833837-31834256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 76
               

               
Conread position:
               
21-422
               

               
Cow position:
               
chr11:32455478-32455059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
84, 76
               

               
Conread position:
               
21-450
               

               
Cow position:
               
chr11:30255862-30255413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 238
               

               
Conread position:
               
22-328
               

               
Cow position:
               
chr11:67951473-67951796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
14, 43
               

               
Conread position:
               
22-328
               

               
Cow position:
               
chr11:83323075-83322771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
126, 57
               

               
Conread position:
               
22-663
               

               
Cow position:
               
chr11:40402360-40403020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
676
               

               
Alignm identity:
               
455
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 201
               

               
Conread position:
               
23-422
               

               
Cow position:
               
chr11:30929804-30929387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 74
               

               
Conread position:
               
27-652
               

               
Cow position:
               
chr11:65282427-65281769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
666
               

               
Alignm identity:
               
456
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 105
               

               
Conread position:
               
35-366
               

               
Cow position:
               
chr11:66945186-66945524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
70, 28
               

               
Conread position:
               
35-460
               

               
Cow position:
               
chr11:56916313-56916755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
112, 224
               

               
Conread position:
               
35-469
               

               
Cow position:
               
chr11:26550886-26550435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 224
               

               
Conread position:
               
35-561
               

               
Cow position:
               
chr11:5584034-5584594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 65
               

               
Conread position:
               
36-469
               

               
Cow position:
               
chr11:4266746-4267195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 61
               

               
Conread position:
               
42-422
               

               
Cow position:
               
chr11:2286116-2285718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
64, 55
               

               
Conread position:
               
43-670
               

               
Cow position:
               
chr11:21887064-21887701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
656
               

               
Alignm identity:
               
435
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 26
               

               
Conread position:
               
48-422
               

               
Cow position:
               
chr11:67454050-67453660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
59, 49
               

               
Conread position:
               
66-422
               

               
Cow position:
               
chr11:33189951-33189576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
19, 32
               

               
Conread position:
               
70-427
               

               
Cow position:
               
chr11:9273024-9272662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
46, 100
               

               
Conread position:
               
70-625
               

               
Cow position:
               
chr11:21846269-21846854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
600
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
74, 149
               

               
Conread position:
               
73-442
               

               
Cow position:
               
chr11:30057571-30057190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
74, 275
               

               
Conread position:
               
78-285
               

               
Cow position:
               
chr11:29585854-29585631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
101-439
               

               
Cow position:
               
chr11:84134845-84135194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 150
               

               
Conread position:
               
102-460
               

               
Cow position:
               
chr11:48167743-48168105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
46, 152
               

               
Conread position:
               
102-469
               

               
Cow position:
               
chr11:77749388-77749026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
46, 151
               

               
Conread position:
               
102-482
               

               
Cow position:
               
chr11:43917777-43917379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
46, 157
               

               
Conread position:
               
103-660
               

               
Cow position:
               
chr11:43510633-43511229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
603
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 156
               

               
Conread position:
               
104-455
               

               
Cow position:
               
chr11:12112271-12111898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 276
               

               
Conread position:
               
132-425
               

               
Cow position:
               
chr11:46777008-46777295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
126, 25
               

               
Conread position:
               
149-427
               

               
Cow position:
               
chr11:41049854-41050126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
37, 10
               

               
Conread position:
               
158-328
               

               
Cow position:
               
chr11:6733911-6734088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
158-399
               

               
Cow position:
               
chr11:31802447-31802691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
158-401
               

               
Cow position:
               
chr11:45632684-45632932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
158-410
               

               
Cow position:
               
chr11:41322506-41322757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
58, 54
               

               
Conread position:
               
158-417
               

               
Cow position:
               
chr11:63844061-63844333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
30, 249
               

               
Conread position:
               
158-418
               

               
Cow position:
               
chr11:76370569-76370831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
30, 74
               

               
Conread position:
               
158-422
               

               
Cow position:
               
chr11:19060802-19061069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
30, 205
               

               
Conread position:
               
158-422
               

               
Cow position:
               
chr11:24045489-24045755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
158-422
               

               
Cow position:
               
chr11:27833482-27833750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 146
               

               
Conread position:
               
158-428
               

               
Cow position:
               
chr11:53855798-53855534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
30, 68
               

               
Conread position:
               
158-442
               

               
Cow position:
               
chr11:67746680-67746397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
62, 8
               

               
Conread position:
               
158-468
               

               
Cow position:
               
chr11:53280127-53280439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
30, 232
               

               
Conread position:
               
158-469
               

               
Cow position:
               
chr11:7229632-7229320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
30, 86
               

               
Conread position:
               
158-469
               

               
Cow position:
               
chr11:32077511-32077823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
30, 86
               

               
Conread position:
               
158-469
               

               
Cow position:
               
chr11:63479122-63478811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
30, 86
               

               
Conread position:
               
158-469
               

               
Cow position:
               
chr11:67347854-67348153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
95, 25
               

               
Conread position:
               
158-473
               

               
Cow position:
               
chr11:38832207-38832524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
30, 86
               

               
Conread position:
               
158-474
               

               
Cow position:
               
chr11:70030691-70030374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 86
               

               
Conread position:
               
158-477
               

               
Cow position:
               
chr11:47757712-47758037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 179
               

               
Conread position:
               
158-580
               

               
Cow position:
               
chr11:17831925-17832370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
27, 179
               

               
Conread position:
               
158-671
               

               
Cow position:
               
chr11:34297751-34297233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
30, 68
               

               
Conread position:
               
158-671
               

               
Cow position:
               
chr11:40772801-40773322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 83
               

               
Conread position:
               
158-671
               

               
Cow position:
               
chr11:45651655-45652182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 156
               

               
Conread position:
               
159-367
               

               
Cow position:
               
chr11:80471667-80471875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
21, 93
               

               
Conread position:
               
159-392
               

               
Cow position:
               
chr11:29949065-29949302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
160-419
               

               
Cow position:
               
chr11:35362060-35361790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
160-425
               

               
Cow position:
               
chr11:11174594-11174339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
228, 88
               

               
Conread position:
               
160-460
               

               
Cow position:
               
chr11:80789118-80789423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 292
               

               
Conread position:
               
160-656
               

               
Cow position:
               
chr11:10094138-10093619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 93
               

               
Conread position:
               
163-430
               

               
Cow position:
               
chr11:63167253-63167525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 183
               

               
Conread position:
               
165-443
               

               
Cow position:
               
chr11:38069564-38069279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
23, 79
               

               
Conread position:
               
166-469
               

               
Cow position:
               
chr11:48411792-48411487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
22, 78
               

               
Conread position:
               
168-343
               

               
Cow position:
               
chr11:81747922-81747742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
168-422
               

               
Cow position:
               
chr11:61131691-61131948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
169-403
               

               
Cow position:
               
chr11:35861114-35861350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
16, 25
               

               
Conread position:
               
179-667
               

               
Cow position:
               
chr11:7377267-7376777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
248, 90
               

               
Conread position:
               
182-469
               

               
Cow position:
               
chr11:21620386-21620100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
73, 59
               

               
Conread position:
               
183-422
               

               
Cow position:
               
chr11:24493564-24493803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
183-469
               

               
Cow position:
               
chr11:58049688-58049967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
153, 40
               

               
Conread position:
               
185-671
               

               
Cow position:
               
chr11:37279339-37279845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 175
               
Show alignments to all cow chromosomes.