Cow genome map

Conread name: rnje10c_n3.y1

Conread position: 1-469
Cow position:
Alignm length: 492
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 82

Conread position: 1-490
Cow position:
Alignm length: 519
Alignm identity: 349
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 72, 34

Conread position: 2-328
Cow position:
Alignm length: 331
Alignm identity: 215
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 186, 23

Conread position: 2-347
Cow position:
Alignm length: 364
Alignm identity: 242
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 103, 42

Conread position: 2-377
Cow position:
Alignm length: 395
Alignm identity: 266
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 20, 12

Conread position: 2-382
Cow position:
Alignm length: 402
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 95

Conread position: 2-390
Cow position:
Alignm length: 405
Alignm identity: 266
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 146, 67

Conread position: 2-393
Cow position:
Alignm length: 413
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 305

Conread position: 2-401
Cow position:
Alignm length: 419
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 102

Conread position: 2-418
Cow position:
Alignm length: 439
Alignm identity: 292
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 39, 29

Conread position: 2-430
Cow position:
Alignm length: 445
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 95

Conread position: 2-437
Cow position:
Alignm length: 456
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 56

Conread position: 2-442
Cow position:
Alignm length: 465
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 241

Conread position: 2-469
Cow position:
Alignm length: 483
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 75

Conread position: 2-469
Cow position:
Alignm length: 490
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 95

Conread position: 2-469
Cow position:
Alignm length: 489
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 256

Conread position: 2-469
Cow position:
Alignm length: 492
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 260

Conread position: 2-477
Cow position:
Alignm length: 497
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 257

Conread position: 2-486
Cow position:
Alignm length: 503
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 25

Conread position: 2-598
Cow position:
Alignm length: 635
Alignm identity: 416
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 41, 245

Conread position: 2-652
Cow position:
Alignm length: 677
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 263

Conread position: 2-653
Cow position:
Alignm length: 694
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 257

Conread position: 2-660
Cow position:
Alignm length: 696
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 95

Conread position: 2-660
Cow position:
Alignm length: 694
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 36

Conread position: 2-660
Cow position:
Alignm length: 697
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 95

Conread position: 2-671
Cow position:
Alignm length: 695
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 95

Conread position: 3-451
Cow position:
Alignm length: 470
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 94

Conread position: 3-460
Cow position:
Alignm length: 480
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 94

Conread position: 3-465
Cow position:
Alignm length: 484
Alignm identity: 269
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 103, 40

Conread position: 4-388
Cow position:
Alignm length: 393
Alignm identity: 263
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 101, 62

Conread position: 6-242
Cow position:
Alignm length: 248
Alignm identity: 174
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 141, 49

Conread position: 11-469
Cow position:
Alignm length: 481
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 84

Conread position: 11-534
Cow position:
Alignm length: 553
Alignm identity: 362
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 27, 21

Conread position: 17-379
Cow position:
Alignm length: 382
Alignm identity: 252
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 90, 80

Conread position: 17-422
Cow position:
Alignm length: 426
Alignm identity: 284
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 90, 66

Conread position: 18-336
Cow position:
Alignm length: 338
Alignm identity: 236
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 86, 77

Conread position: 18-378
Cow position:
Alignm length: 383
Alignm identity: 255
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 89, 79

Conread position: 18-381
Cow position:
Alignm length: 382
Alignm identity: 248
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 129, 50

Conread position: 18-388
Cow position:
Alignm length: 391
Alignm identity: 267
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 87, 79

Conread position: 18-393
Cow position:
Alignm length: 395
Alignm identity: 259
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 129, 359

Conread position: 18-396
Cow position:
Alignm length: 391
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 25

Conread position: 18-414
Cow position:
Alignm length: 416
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 79

Conread position: 18-418
Cow position:
Alignm length: 423
Alignm identity: 288
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 88, 79

Conread position: 18-419
Cow position:
Alignm length: 422
Alignm identity: 281
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 88, 79

Conread position: 18-422
Cow position:
Alignm length: 425
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 79

Conread position: 18-422
Cow position:
Alignm length: 425
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 79

Conread position: 18-422
Cow position:
Alignm length: 424
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 79

Conread position: 18-422
Cow position:
Alignm length: 432
Alignm identity: 290
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 88, 79

Conread position: 18-422
Cow position:
Alignm length: 424
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 79

Conread position: 18-422
Cow position:
Alignm length: 427
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 79

Conread position: 18-422
Cow position:
Alignm length: 426
Alignm identity: 279
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 81, 90

Conread position: 18-422
Cow position:
Alignm length: 424
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 79

Conread position: 18-455
Cow position:
Alignm length: 459
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 241

Conread position: 18-460
Cow position:
Alignm length: 460
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 79

Conread position: 18-460
Cow position:
Alignm length: 462
Alignm identity: 305
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 87, 79

Conread position: 18-469
Cow position:
Alignm length: 471
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 299

Conread position: 18-469
Cow position:
Alignm length: 468
Alignm identity: 306
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 89, 79

Conread position: 18-469
Cow position:
Alignm length: 472
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 359

Conread position: 18-469
Cow position:
Alignm length: 473
Alignm identity: 313
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 88, 79

Conread position: 18-469
Cow position:
Alignm length: 472
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 51

Conread position: 18-469
Cow position:
Alignm length: 473
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 79

Conread position: 18-469
Cow position:
Alignm length: 473
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 79

Conread position: 18-471
Cow position:
Alignm length: 475
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 79

Conread position: 18-482
Cow position:
Alignm length: 489
Alignm identity: 328
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 88, 79

Conread position: 18-482
Cow position:
Alignm length: 485
Alignm identity: 318
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 89, 79

Conread position: 18-482
Cow position:
Alignm length: 486
Alignm identity: 320
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 89, 79

Conread position: 18-482
Cow position:
Alignm length: 487
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 79

Conread position: 18-653
Cow position:
Alignm length: 682
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 79

Conread position: 18-660
Cow position:
Alignm length: 693
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 79

Conread position: 18-671
Cow position:
Alignm length: 696
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 51

Conread position: 18-671
Cow position:
Alignm length: 697
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 441

Conread position: 18-671
Cow position:
Alignm length: 702
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 79

Conread position: 21-429
Cow position:
Alignm length: 431
Alignm identity: 285
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 23, 49

Conread position: 21-469
Cow position:
Alignm length: 467
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 354

Conread position: 21-671
Cow position:
Alignm length: 695
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 22

Conread position: 22-380
Cow position:
Alignm length: 367
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 207

Conread position: 26-469
Cow position:
Alignm length: 466
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 68

Conread position: 27-427
Cow position:
Alignm length: 405
Alignm identity: 258
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 161, 16

Conread position: 28-511
Cow position:
Alignm length: 506
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 287

Conread position: 39-660
Cow position:
Alignm length: 664
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 58

Conread position: 73-396
Cow position:
Alignm length: 344
Alignm identity: 230
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 9, 22

Conread position: 103-469
Cow position:
Alignm length: 389
Alignm identity: 270
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 45, 128

Conread position: 106-442
Cow position:
Alignm length: 354
Alignm identity: 256
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 42, 92

Conread position: 107-469
Cow position:
Alignm length: 382
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 150

Conread position: 122-472
Cow position:
Alignm length: 355
Alignm identity: 238
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 5, 29

Conread position: 148-663
Cow position:
Alignm length: 521
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 9

Conread position: 158-343
Cow position:
Alignm length: 191
Alignm identity: 138
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 23, 0

Conread position: 158-364
Cow position:
Alignm length: 208
Alignm identity: 148
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 97, 40

Conread position: 158-383
Cow position:
Alignm length: 230
Alignm identity: 156
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 30, 204

Conread position: 158-412
Cow position:
Alignm length: 261
Alignm identity: 177
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 30, 186

Conread position: 158-414
Cow position:
Alignm length: 262
Alignm identity: 189
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 30, 165

Conread position: 158-422
Cow position:
Alignm length: 268
Alignm identity: 188
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 31, 0

Conread position: 158-422
Cow position:
Alignm length: 268
Alignm identity: 185
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 30, 0

Conread position: 158-422
Cow position:
Alignm length: 269
Alignm identity: 188
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 30, 204

Conread position: 158-430
Cow position:
Alignm length: 279
Alignm identity: 199
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 19, 76

Conread position: 158-460
Cow position:
Alignm length: 307
Alignm identity: 212
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 30, 285

Conread position: 158-469
Cow position:
Alignm length: 316
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 85

Conread position: 158-469
Cow position:
Alignm length: 318
Alignm identity: 226
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 30, 86

Conread position: 158-662
Cow position:
Alignm length: 533
Alignm identity: 347
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 30, 157

Conread position: 160-349
Cow position:
Alignm length: 196
Alignm identity: 139
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 27, 150

Conread position: 163-422
Cow position:
Alignm length: 268
Alignm identity: 186
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 25, 80

Conread position: 163-422
Cow position:
Alignm length: 266
Alignm identity: 185
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 20, 170

Conread position: 163-482
Cow position:
Alignm length: 326
Alignm identity: 228
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 25, 81

Conread position: 168-422
Cow position:
Alignm length: 262
Alignm identity: 173
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 17, 218

Conread position: 168-422
Cow position:
Alignm length: 258
Alignm identity: 182
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 20, 0

Conread position: 168-660
Cow position:
Alignm length: 523
Alignm identity: 351
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 20, 122

Conread position: 171-422
Cow position:
Alignm length: 259
Alignm identity: 185
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 17, 74

Conread position: 174-417
Cow position:
Alignm length: 248
Alignm identity: 183
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 14, 81

Conread position: 183-461
Cow position:
Alignm length: 286
Alignm identity: 196
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 116, 181

Conread position: 183-482
Cow position:
Alignm length: 305
Alignm identity: 214
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 75, 58

Conread position: 185-418
Cow position:
Alignm length: 235
Alignm identity: 170
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 138, 55

Conread position: 187-422
Cow position:
Alignm length: 236
Alignm identity: 164
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.