Cow genome map

Conread name: rnje10c_n3.y1

Conread position: 1-351
Cow position:
Alignm length: 358
Alignm identity: 243
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 76, 101

Conread position: 1-442
Cow position:
Alignm length: 463
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 96

Conread position: 1-660
Cow position:
Alignm length: 706
Alignm identity: 486
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 96

Conread position: 2-221
Cow position:
Alignm length: 226
Alignm identity: 160
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 143, 121

Conread position: 2-327
Cow position:
Alignm length: 355
Alignm identity: 236
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 87, 28

Conread position: 2-342
Cow position:
Alignm length: 360
Alignm identity: 250
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 102, 93

Conread position: 2-348
Cow position:
Alignm length: 367
Alignm identity: 240
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 60, 81

Conread position: 2-353
Cow position:
Alignm length: 373
Alignm identity: 257
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 103, 95

Conread position: 2-364
Cow position:
Alignm length: 380
Alignm identity: 245
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 146, 61

Conread position: 2-403
Cow position:
Alignm length: 421
Alignm identity: 279
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 148, 59

Conread position: 2-419
Cow position:
Alignm length: 438
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 95

Conread position: 2-419
Cow position:
Alignm length: 438
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 102

Conread position: 2-422
Cow position:
Alignm length: 443
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 259

Conread position: 2-423
Cow position:
Alignm length: 440
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 135

Conread position: 2-429
Cow position:
Alignm length: 452
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 33

Conread position: 2-439
Cow position:
Alignm length: 473
Alignm identity: 312
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 74, 434

Conread position: 2-447
Cow position:
Alignm length: 470
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 98

Conread position: 2-458
Cow position:
Alignm length: 467
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 51

Conread position: 2-460
Cow position:
Alignm length: 478
Alignm identity: 321
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 73, 98

Conread position: 2-466
Cow position:
Alignm length: 488
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 33

Conread position: 2-469
Cow position:
Alignm length: 491
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 93

Conread position: 2-469
Cow position:
Alignm length: 489
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 95

Conread position: 2-469
Cow position:
Alignm length: 490
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 32

Conread position: 2-469
Cow position:
Alignm length: 472
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 402, 146

Conread position: 2-469
Cow position:
Alignm length: 490
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 95

Conread position: 2-469
Cow position:
Alignm length: 486
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 103

Conread position: 2-469
Cow position:
Alignm length: 485
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 95

Conread position: 2-469
Cow position:
Alignm length: 488
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 102

Conread position: 2-469
Cow position:
Alignm length: 489
Alignm identity: 323
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 103, 30

Conread position: 2-480
Cow position:
Alignm length: 508
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 33

Conread position: 2-648
Cow position:
Alignm length: 692
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 257

Conread position: 2-650
Cow position:
Alignm length: 689
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 88

Conread position: 2-660
Cow position:
Alignm length: 704
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 257

Conread position: 2-660
Cow position:
Alignm length: 703
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 257

Conread position: 2-668
Cow position:
Alignm length: 700
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 237

Conread position: 2-671
Cow position:
Alignm length: 713
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 9

Conread position: 2-671
Cow position:
Alignm length: 710
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 240

Conread position: 2-671
Cow position:
Alignm length: 705
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 250

Conread position: 3-410
Cow position:
Alignm length: 427
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 94

Conread position: 3-438
Cow position:
Alignm length: 455
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 284

Conread position: 3-649
Cow position:
Alignm length: 685
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 18

Conread position: 4-423
Cow position:
Alignm length: 440
Alignm identity: 300
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 95, 100

Conread position: 5-255
Cow position:
Alignm length: 257
Alignm identity: 173
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 137, 224

Conread position: 5-422
Cow position:
Alignm length: 437
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 92

Conread position: 5-469
Cow position:
Alignm length: 484
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 21

Conread position: 5-469
Cow position:
Alignm length: 484
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 92

Conread position: 5-482
Cow position:
Alignm length: 501
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 254

Conread position: 11-460
Cow position:
Alignm length: 476
Alignm identity: 318
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 94, 75

Conread position: 11-671
Cow position:
Alignm length: 683
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 86

Conread position: 18-325
Cow position:
Alignm length: 324
Alignm identity: 221
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 130, 197

Conread position: 18-383
Cow position:
Alignm length: 386
Alignm identity: 255
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 88, 79

Conread position: 18-401
Cow position:
Alignm length: 404
Alignm identity: 268
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 89, 79

Conread position: 18-422
Cow position:
Alignm length: 425
Alignm identity: 285
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 89, 79

Conread position: 18-422
Cow position:
Alignm length: 424
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 79

Conread position: 18-422
Cow position:
Alignm length: 425
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 79

Conread position: 18-422
Cow position:
Alignm length: 426
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 79

Conread position: 18-422
Cow position:
Alignm length: 421
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 79

Conread position: 18-422
Cow position:
Alignm length: 421
Alignm identity: 272
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 37, 41

Conread position: 18-422
Cow position:
Alignm length: 424
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 79

Conread position: 18-422
Cow position:
Alignm length: 424
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 79

Conread position: 18-422
Cow position:
Alignm length: 424
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 79

Conread position: 18-422
Cow position:
Alignm length: 424
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 79

Conread position: 18-468
Cow position:
Alignm length: 472
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 206

Conread position: 18-469
Cow position:
Alignm length: 473
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 79

Conread position: 18-469
Cow position:
Alignm length: 473
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 241

Conread position: 18-469
Cow position:
Alignm length: 473
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 79

Conread position: 18-469
Cow position:
Alignm length: 475
Alignm identity: 313
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 81, 86

Conread position: 18-469
Cow position:
Alignm length: 473
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 241

Conread position: 18-469
Cow position:
Alignm length: 473
Alignm identity: 310
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 87, 79

Conread position: 18-469
Cow position:
Alignm length: 473
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 79

Conread position: 18-471
Cow position:
Alignm length: 475
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 79

Conread position: 18-476
Cow position:
Alignm length: 476
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 355

Conread position: 18-482
Cow position:
Alignm length: 485
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 79

Conread position: 18-660
Cow position:
Alignm length: 687
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 79

Conread position: 18-668
Cow position:
Alignm length: 695
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 44

Conread position: 21-419
Cow position:
Alignm length: 419
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 76

Conread position: 21-422
Cow position:
Alignm length: 420
Alignm identity: 269
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 126, 222

Conread position: 21-460
Cow position:
Alignm length: 463
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 57

Conread position: 21-469
Cow position:
Alignm length: 469
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 76

Conread position: 21-469
Cow position:
Alignm length: 459
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 68

Conread position: 22-352
Cow position:
Alignm length: 349
Alignm identity: 242
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 130, 41

Conread position: 23-407
Cow position:
Alignm length: 411
Alignm identity: 275
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 50, 81

Conread position: 23-564
Cow position:
Alignm length: 575
Alignm identity: 371
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 50, 79

Conread position: 26-469
Cow position:
Alignm length: 473
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 57

Conread position: 30-410
Cow position:
Alignm length: 398
Alignm identity: 274
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 63, 69

Conread position: 39-469
Cow position:
Alignm length: 452
Alignm identity: 295
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 109, 85

Conread position: 42-345
Cow position:
Alignm length: 323
Alignm identity: 229
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 60, 27

Conread position: 48-460
Cow position:
Alignm length: 430
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 148

Conread position: 62-469
Cow position:
Alignm length: 432
Alignm identity: 291
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 43, 35

Conread position: 103-422
Cow position:
Alignm length: 338
Alignm identity: 238
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 44, 137

Conread position: 103-469
Cow position:
Alignm length: 381
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 268

Conread position: 116-446
Cow position:
Alignm length: 338
Alignm identity: 221
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 31, 111

Conread position: 116-455
Cow position:
Alignm length: 346
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 41

Conread position: 132-329
Cow position:
Alignm length: 202
Alignm identity: 147
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 52, 14

Conread position: 133-452
Cow position:
Alignm length: 328
Alignm identity: 236
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 49, 5

Conread position: 157-439
Cow position:
Alignm length: 290
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 0

Conread position: 158-340
Cow position:
Alignm length: 186
Alignm identity: 135
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 30, 84

Conread position: 158-342
Cow position:
Alignm length: 190
Alignm identity: 135
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 30, 86

Conread position: 158-380
Cow position:
Alignm length: 226
Alignm identity: 164
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 30, 83

Conread position: 158-418
Cow position:
Alignm length: 264
Alignm identity: 183
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 27, 58

Conread position: 158-419
Cow position:
Alignm length: 266
Alignm identity: 190
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 30, 204

Conread position: 158-422
Cow position:
Alignm length: 268
Alignm identity: 187
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 30, 0

Conread position: 158-422
Cow position:
Alignm length: 269
Alignm identity: 192
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 30, 204

Conread position: 158-422
Cow position:
Alignm length: 269
Alignm identity: 190
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 30, 204

Conread position: 158-422
Cow position:
Alignm length: 271
Alignm identity: 192
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 27, 150

Conread position: 158-422
Cow position:
Alignm length: 269
Alignm identity: 183
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 31, 76

Conread position: 158-422
Cow position:
Alignm length: 269
Alignm identity: 190
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 30, 204

Conread position: 158-437
Cow position:
Alignm length: 286
Alignm identity: 210
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 30, 68

Conread position: 158-441
Cow position:
Alignm length: 292
Alignm identity: 208
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 24, 86

Conread position: 158-443
Cow position:
Alignm length: 291
Alignm identity: 206
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 30, 86

Conread position: 158-653
Cow position:
Alignm length: 522
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 86

Conread position: 158-660
Cow position:
Alignm length: 527
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 87

Conread position: 158-671
Cow position:
Alignm length: 545
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 204

Conread position: 159-422
Cow position:
Alignm length: 265
Alignm identity: 180
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 93, 82

Conread position: 164-423
Cow position:
Alignm length: 263
Alignm identity: 191
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 25, 54

Conread position: 166-671
Cow position:
Alignm length: 536
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 78

Conread position: 168-469
Cow position:
Alignm length: 310
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 76

Conread position: 174-647
Cow position:
Alignm length: 494
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 235, 49

Conread position: 183-422
Cow position:
Alignm length: 241
Alignm identity: 171
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 153, 176

Conread position: 183-422
Cow position:
Alignm length: 241
Alignm identity: 166
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 152, 46

Conread position: 183-427
Cow position:
Alignm length: 251
Alignm identity: 177
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 75, 56

Show alignments to all cow chromosomes.