Cow genome map
| Conread name: | rnje10c_n3.y1 |
| Conread position: | 1-298 |
| Cow position: | chr15:11674980-11674662 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 2-244 |
| Cow position: | chr15:13669328-13669096 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 103, 95 |
| Conread position: | 2-245 |
| Cow position: | chr15:4873953-4874209 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 140, 33 |
| Conread position: | 2-255 |
| Cow position: | chr15:41049813-41049561 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 145, 76 |
| Conread position: | 2-341 |
| Cow position: | chr15:49065085-49064738 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 243 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 99, 42 |
| Conread position: | 2-343 |
| Cow position: | chr15:24968364-24968731 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 256 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 97, 102 |
| Conread position: | 2-393 |
| Cow position: | chr15:20458725-20458316 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 272 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 145, 364 |
| Conread position: | 2-413 |
| Cow position: | chr15:22752036-22752464 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 281 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 89, 84 |
| Conread position: | 2-418 |
| Cow position: | chr15:608738-609158 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 95 |
| Conread position: | 2-418 |
| Cow position: | chr15:6588543-6588977 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 289 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 99, 56 |
| Conread position: | 2-422 |
| Cow position: | chr15:34140591-34141029 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 101 |
| Conread position: | 2-439 |
| Cow position: | chr15:5913202-5913644 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 240 |
| Conread position: | 2-459 |
| Cow position: | chr15:41360386-41359917 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 319 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 146, 96 |
| Conread position: | 2-460 |
| Cow position: | chr15:6120772-6120294 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 319 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 74, 132 |
| Conread position: | 2-460 |
| Cow position: | chr15:37382200-37382672 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 124 |
| Conread position: | 2-460 |
| Cow position: | chr15:44073837-44073364 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 257 |
| Conread position: | 2-465 |
| Cow position: | chr15:1329529-1329071 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 81 |
| Conread position: | 2-467 |
| Cow position: | chr15:35749905-35750386 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 97 |
| Conread position: | 2-468 |
| Cow position: | chr15:18661876-18661396 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 53 |
| Conread position: | 2-469 |
| Cow position: | chr15:312411-312892 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 95 |
| Conread position: | 2-469 |
| Cow position: | chr15:4389139-4388656 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 95 |
| Conread position: | 2-469 |
| Cow position: | chr15:6152252-6152735 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 257 |
| Conread position: | 2-469 |
| Cow position: | chr15:6806107-6805622 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 259 |
| Conread position: | 2-469 |
| Cow position: | chr15:7271732-7271247 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 226 |
| Conread position: | 2-469 |
| Cow position: | chr15:7578550-7578073 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 76 |
| Conread position: | 2-469 |
| Cow position: | chr15:12417323-12417803 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 257 |
| Conread position: | 2-469 |
| Cow position: | chr15:17772957-17773440 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 91 |
| Conread position: | 2-469 |
| Cow position: | chr15:20413966-20413483 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 95 |
| Conread position: | 2-469 |
| Cow position: | chr15:21532747-21533228 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 255 |
| Conread position: | 2-469 |
| Cow position: | chr15:27747123-27747611 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 260 |
| Conread position: | 2-477 |
| Cow position: | chr15:17399362-17398871 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 97 |
| Conread position: | 2-582 |
| Cow position: | chr15:14578039-14578633 (view UCSC Genome Browser custom track) |
| Alignm length: | 622 |
| Alignm identity: | 412 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 47, 76 |
| Conread position: | 2-660 |
| Cow position: | chr15:4925536-4924849 (view UCSC Genome Browser custom track) |
| Alignm length: | 696 |
| Alignm identity: | 468 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 41 |
| Conread position: | 2-660 |
| Cow position: | chr15:18214960-18214264 (view UCSC Genome Browser custom track) |
| Alignm length: | 704 |
| Alignm identity: | 457 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 87 |
| Conread position: | 2-669 |
| Cow position: | chr15:7941808-7941108 (view UCSC Genome Browser custom track) |
| Alignm length: | 704 |
| Alignm identity: | 461 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 266 |
| Conread position: | 2-669 |
| Cow position: | chr15:42533430-42532733 (view UCSC Genome Browser custom track) |
| Alignm length: | 707 |
| Alignm identity: | 490 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 231 |
| Conread position: | 2-671 |
| Cow position: | chr15:61014-60313 (view UCSC Genome Browser custom track) |
| Alignm length: | 717 |
| Alignm identity: | 463 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 272 |
| Conread position: | 2-671 |
| Cow position: | chr15:6163714-6164411 (view UCSC Genome Browser custom track) |
| Alignm length: | 708 |
| Alignm identity: | 481 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 131 |
| Conread position: | 2-671 |
| Cow position: | chr15:13683720-13683016 (view UCSC Genome Browser custom track) |
| Alignm length: | 720 |
| Alignm identity: | 482 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 87 |
| Conread position: | 2-671 |
| Cow position: | chr15:37461242-37460554 (view UCSC Genome Browser custom track) |
| Alignm length: | 697 |
| Alignm identity: | 438 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 12 |
| Conread position: | 3-351 |
| Cow position: | chr15:8412222-8411873 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 252 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 185, 27 |
| Conread position: | 3-421 |
| Cow position: | chr15:23937029-23937445 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 283 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 5, 51 |
| Conread position: | 3-422 |
| Cow position: | chr15:41792939-41793376 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 76 |
| Conread position: | 3-443 |
| Cow position: | chr15:35643075-35643519 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 250 |
| Conread position: | 3-460 |
| Cow position: | chr15:7575193-7574718 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 319 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 145, 256 |
| Conread position: | 3-671 |
| Cow position: | chr15:1786150-1785446 (view UCSC Genome Browser custom track) |
| Alignm length: | 709 |
| Alignm identity: | 461 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 367 |
| Conread position: | 4-388 |
| Cow position: | chr15:7264324-7263930 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 266 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 144, 65 |
| Conread position: | 5-422 |
| Cow position: | chr15:36939994-36940429 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 298 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 100, 90 |
| Conread position: | 5-460 |
| Cow position: | chr15:3007452-3007922 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 78 |
| Conread position: | 11-422 |
| Cow position: | chr15:25069112-25069540 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 75 |
| Conread position: | 17-422 |
| Cow position: | chr15:7511979-7512402 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 287 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 90, 80 |
| Conread position: | 17-460 |
| Cow position: | chr15:12442903-12442442 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 208 |
| Conread position: | 18-352 |
| Cow position: | chr15:2805897-2806247 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 233 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 87, 77 |
| Conread position: | 18-371 |
| Cow position: | chr15:38285681-38285307 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 245 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 10, 82 |
| Conread position: | 18-384 |
| Cow position: | chr15:25203596-25203980 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 250 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 89, 79 |
| Conread position: | 18-417 |
| Cow position: | chr15:20172621-20173036 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 284 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 130, 55 |
| Conread position: | 18-417 |
| Cow position: | chr15:35838478-35838066 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 279 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 73, 81 |
| Conread position: | 18-422 |
| Cow position: | chr15:2643972-2644392 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 79 |
| Conread position: | 18-422 |
| Cow position: | chr15:6617174-6616752 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 281 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 89, 79 |
| Conread position: | 18-422 |
| Cow position: | chr15:7985051-7985473 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 79 |
| Conread position: | 18-422 |
| Cow position: | chr15:11596006-11596428 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 79 |
| Conread position: | 18-422 |
| Cow position: | chr15:20404307-20404729 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 359 |
| Conread position: | 18-422 |
| Cow position: | chr15:20944748-20944325 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 79 |
| Conread position: | 18-422 |
| Cow position: | chr15:21152445-21152867 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 79 |
| Conread position: | 18-422 |
| Cow position: | chr15:21637649-21637226 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 283 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 87, 79 |
| Conread position: | 18-422 |
| Cow position: | chr15:23666118-23666540 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 79 |
| Conread position: | 18-422 |
| Cow position: | chr15:25463152-25463570 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 287 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 89, 79 |
| Conread position: | 18-422 |
| Cow position: | chr15:41028943-41029365 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 79 |
| Conread position: | 18-422 |
| Cow position: | chr15:45211388-45210966 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 79 |
| Conread position: | 18-422 |
| Cow position: | chr15:50142635-50142213 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 79 |
| Conread position: | 18-432 |
| Cow position: | chr15:25133338-25132906 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 241 |
| Conread position: | 18-455 |
| Cow position: | chr15:50152076-50151621 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 79 |
| Conread position: | 18-460 |
| Cow position: | chr15:21807225-21806766 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 359 |
| Conread position: | 18-460 |
| Cow position: | chr15:42727747-42727299 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 11 |
| Conread position: | 18-460 |
| Cow position: | chr15:44576775-44576315 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 80 |
| Conread position: | 18-460 |
| Cow position: | chr15:45944322-45944779 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 79 |
| Conread position: | 18-460 |
| Cow position: | chr15:48557095-48556636 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 79 |
| Conread position: | 18-469 |
| Cow position: | chr15:5640215-5640682 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 241 |
| Conread position: | 18-469 |
| Cow position: | chr15:6065370-6065820 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 323 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 130, 16 |
| Conread position: | 18-469 |
| Cow position: | chr15:8576528-8576058 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 244 |
| Conread position: | 18-469 |
| Cow position: | chr15:9620024-9620492 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 79 |
| Conread position: | 18-469 |
| Cow position: | chr15:12859517-12859050 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 79 |
| Conread position: | 18-469 |
| Cow position: | chr15:22759624-22760095 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 363 |
| Conread position: | 18-469 |
| Cow position: | chr15:25164728-25165195 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 313 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 129, 241 |
| Conread position: | 18-469 |
| Cow position: | chr15:36329086-36329551 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 37 |
| Conread position: | 18-472 |
| Cow position: | chr15:37744429-37743967 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 308 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 89, 79 |
| Conread position: | 18-484 |
| Cow position: | chr15:6158556-6158076 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 318 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 87, 79 |
| Conread position: | 18-591 |
| Cow position: | chr15:46055061-46054475 (view UCSC Genome Browser custom track) |
| Alignm length: | 604 |
| Alignm identity: | 383 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 23, 56 |
| Conread position: | 18-652 |
| Cow position: | chr15:3257140-3257809 (view UCSC Genome Browser custom track) |
| Alignm length: | 684 |
| Alignm identity: | 444 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 87, 12 |
| Conread position: | 18-659 |
| Cow position: | chr15:17073987-17074670 (view UCSC Genome Browser custom track) |
| Alignm length: | 689 |
| Alignm identity: | 451 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 79 |
| Conread position: | 18-660 |
| Cow position: | chr15:32701362-32702039 (view UCSC Genome Browser custom track) |
| Alignm length: | 683 |
| Alignm identity: | 456 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 79 |
| Conread position: | 18-660 |
| Cow position: | chr15:50308096-50308774 (view UCSC Genome Browser custom track) |
| Alignm length: | 684 |
| Alignm identity: | 467 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 79 |
| Conread position: | 18-663 |
| Cow position: | chr15:3720766-3721444 (view UCSC Genome Browser custom track) |
| Alignm length: | 686 |
| Alignm identity: | 446 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 79 |
| Conread position: | 18-671 |
| Cow position: | chr15:2616706-2617390 (view UCSC Genome Browser custom track) |
| Alignm length: | 691 |
| Alignm identity: | 472 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 35 |
| Conread position: | 18-671 |
| Cow position: | chr15:4214536-4213849 (view UCSC Genome Browser custom track) |
| Alignm length: | 692 |
| Alignm identity: | 472 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 229 |
| Conread position: | 21-469 |
| Cow position: | chr15:17034261-17034718 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 76 |
| Conread position: | 21-671 |
| Cow position: | chr15:33228685-33229374 (view UCSC Genome Browser custom track) |
| Alignm length: | 701 |
| Alignm identity: | 454 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 221 |
| Conread position: | 22-460 |
| Cow position: | chr15:2590764-2590320 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 304 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 125, 72 |
| Conread position: | 23-469 |
| Cow position: | chr15:22095704-22096159 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 81 |
| Conread position: | 27-634 |
| Cow position: | chr15:5020729-5020090 (view UCSC Genome Browser custom track) |
| Alignm length: | 648 |
| Alignm identity: | 440 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 232 |
| Conread position: | 30-422 |
| Cow position: | chr15:9735369-9735772 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 278 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 53, 209 |
| Conread position: | 30-671 |
| Cow position: | chr15:35416952-35416276 (view UCSC Genome Browser custom track) |
| Alignm length: | 684 |
| Alignm identity: | 448 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 67 |
| Conread position: | 35-308 |
| Cow position: | chr15:19814221-19814513 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 200 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 77, 207 |
| Conread position: | 35-422 |
| Cow position: | chr15:6758118-6758523 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 62 |
| Conread position: | 35-460 |
| Cow position: | chr15:481922-481501 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 273 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 97, 62 |
| Conread position: | 35-469 |
| Cow position: | chr15:42940267-42939820 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 204 |
| Conread position: | 38-422 |
| Cow position: | chr15:6648058-6648460 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 285 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 103, 25 |
| Conread position: | 39-422 |
| Cow position: | chr15:7267956-7267555 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 338 |
| Conread position: | 41-274 |
| Cow position: | chr15:10577871-10577637 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 106, 135 |
| Conread position: | 41-573 |
| Cow position: | chr15:44260312-44260873 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 526 |
| Conread position: | 56-469 |
| Cow position: | chr15:7319903-7319475 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 203 |
| Conread position: | 63-455 |
| Cow position: | chr15:29883991-29884391 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 281 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 82, 196 |
| Conread position: | 68-425 |
| Cow position: | chr15:2669982-2670343 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 253 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 79, 117 |
| Conread position: | 69-422 |
| Cow position: | chr15:5498379-5498011 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 190 |
| Conread position: | 70-443 |
| Cow position: | chr15:37769750-37770133 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 171 |
| Conread position: | 78-427 |
| Cow position: | chr15:21910982-21911349 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 265 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 27, 21 |
| Conread position: | 103-364 |
| Cow position: | chr15:8001276-8001553 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 193 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 45, 153 |
| Conread position: | 103-469 |
| Cow position: | chr15:19734508-19734890 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 156 |
| Conread position: | 103-469 |
| Cow position: | chr15:24568762-24569144 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 272 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 45, 156 |
| Conread position: | 103-616 |
| Cow position: | chr15:2925494-2924948 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 365 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 45, 155 |
| Conread position: | 103-671 |
| Cow position: | chr15:5242763-5243350 (view UCSC Genome Browser custom track) |
| Alignm length: | 605 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 139 |
| Conread position: | 105-422 |
| Cow position: | chr15:7847519-7847846 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 42, 270 |
| Conread position: | 115-343 |
| Cow position: | chr15:4918370-4918139 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 73, 24 |
| Conread position: | 121-459 |
| Cow position: | chr15:26158274-26157926 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 258 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 33, 104 |
| Conread position: | 128-671 |
| Cow position: | chr15:33304549-33305106 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 13 |
| Conread position: | 143-422 |
| Cow position: | chr15:20647399-20647118 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 201 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 45, 21 |
| Conread position: | 143-426 |
| Cow position: | chr15:47342977-47343247 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 115, 32 |
| Conread position: | 149-437 |
| Cow position: | chr15:2928488-2928198 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 37, 68 |
| Conread position: | 158-375 |
| Cow position: | chr15:39407047-39407273 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 171 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 158-379 |
| Cow position: | chr15:30045628-30045404 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 24, 96 |
| Conread position: | 158-398 |
| Cow position: | chr15:16927123-16926886 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 22, 84 |
| Conread position: | 158-413 |
| Cow position: | chr15:35739450-35739194 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 189 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 27, 68 |
| Conread position: | 158-420 |
| Cow position: | chr15:15648986-15649239 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 30, 81 |
| Conread position: | 158-422 |
| Cow position: | chr15:678282-678015 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 158-422 |
| Cow position: | chr15:6564113-6563847 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 187 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 30, 204 |
| Conread position: | 158-422 |
| Cow position: | chr15:33527352-33527608 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 200 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 30, 88 |
| Conread position: | 158-426 |
| Cow position: | chr15:40821346-40821076 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 186 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 19, 84 |
| Conread position: | 158-459 |
| Cow position: | chr15:3792017-3791721 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 258, 83 |
| Conread position: | 158-460 |
| Cow position: | chr15:4123004-4122701 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 209 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 30, 284 |
| Conread position: | 158-469 |
| Cow position: | chr15:18264540-18264853 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 218 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 30, 86 |
| Conread position: | 158-473 |
| Cow position: | chr15:6488988-6488673 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 30, 60 |
| Conread position: | 158-671 |
| Cow position: | chr15:22539618-22540137 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 51 |
| Conread position: | 159-671 |
| Cow position: | chr15:19655239-19654729 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 330 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 29, 85 |
| Conread position: | 160-671 |
| Cow position: | chr15:35405191-35404655 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 82 |
| Conread position: | 163-337 |
| Cow position: | chr15:50956726-50956539 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 25, 181 |
| Conread position: | 165-469 |
| Cow position: | chr15:44364144-44364445 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 23, 88 |
| Conread position: | 166-427 |
| Cow position: | chr15:39630373-39630633 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 189 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 19, 152 |
| Conread position: | 166-618 |
| Cow position: | chr15:21409942-21409478 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 311 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 172, 57 |
| Conread position: | 168-427 |
| Cow position: | chr15:47842298-47842039 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 191 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 20, 86 |
| Conread position: | 168-436 |
| Cow position: | chr15:53356996-53357267 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 19, 225 |
| Conread position: | 168-469 |
| Cow position: | chr15:2080541-2080240 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 217 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 20, 76 |
| Conread position: | 168-469 |
| Cow position: | chr15:5198166-5197864 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 220 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 20, 76 |
| Conread position: | 171-417 |
| Cow position: | chr15:6537657-6537903 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 17, 73 |
| Conread position: | 173-376 |
| Cow position: | chr15:23552639-23552845 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 174-480 |
| Cow position: | chr15:561931-561623 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 70 |
| Conread position: | 174-482 |
| Cow position: | chr15:6367289-6367593 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 79, 7 |
| Conread position: | 180-670 |
| Cow position: | chr15:7447524-7448029 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 308 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 47, 152 |
| Conread position: | 183-417 |
| Cow position: | chr15:4874689-4874916 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 162 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 183-422 |
| Cow position: | chr15:4933578-4933339 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 70, 58 |
| Conread position: | 183-460 |
| Cow position: | chr15:17267709-17267431 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 204 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 34, 59 |
| Conread position: | 183-463 |
| Cow position: | chr15:45501965-45502241 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 191 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 197, 46 |
| Conread position: | 183-469 |
| Cow position: | chr15:18579915-18579631 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 75, 58 |
| Conread position: | 185-422 |
| Cow position: | chr15:36622480-36622708 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 188-671 |
| Cow position: | chr15:33753094-33753600 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 171 |
Show alignments to all cow chromosomes.