Cow genome map


           Conread name:
           rnje10c_n3.y1
        

               Conread position:
               1-422
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               292
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               146, 267
               

               Conread position:
               1-654
               

               Cow position:
               
               

               Alignm length:
               694
               

               Alignm identity:
               446
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               140, 77
               

               Conread position:
               2-262
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               133, 167
               

               Conread position:
               2-371
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               145, 87
               

               Conread position:
               2-373
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 95
               

               Conread position:
               2-393
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               269
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               152, 56
               

               Conread position:
               2-412
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 61
               

               Conread position:
               2-416
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 12
               

               Conread position:
               2-420
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 157
               

               Conread position:
               2-425
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 89
               

               Conread position:
               2-426
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 16
               

               Conread position:
               2-443
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               306
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               152, 124
               

               Conread position:
               2-443
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               309
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               103, 95
               

               Conread position:
               2-459
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               146, 257
               

               Conread position:
               2-459
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 371
               

               Conread position:
               2-469
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 95
               

               Conread position:
               2-469
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 95
               

               Conread position:
               2-469
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               146, 32
               

               Conread position:
               2-469
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 87
               

               Conread position:
               2-469
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 95
               

               Conread position:
               2-469
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               328
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               103, 16
               

               Conread position:
               2-469
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               146, 257
               

               Conread position:
               2-469
               

               Cow position:
               
               

               Alignm length:
               496
               

               Alignm identity:
               330
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               146, 84
               

               Conread position:
               2-469
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 257
               

               Conread position:
               2-482
               

               Cow position:
               
               

               Alignm length:
               506
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 76
               

               Conread position:
               2-624
               

               Cow position:
               
               

               Alignm length:
               659
               

               Alignm identity:
               435
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 95
               

               Conread position:
               2-653
               

               Cow position:
               
               

               Alignm length:
               697
               

               Alignm identity:
               470
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               146, 254
               

               Conread position:
               2-659
               

               Cow position:
               
               

               Alignm length:
               701
               

               Alignm identity:
               468
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 27
               

               Conread position:
               2-670
               

               Cow position:
               
               

               Alignm length:
               701
               

               Alignm identity:
               458
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 23
               

               Conread position:
               2-671
               

               Cow position:
               
               

               Alignm length:
               718
               

               Alignm identity:
               491
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 98
               

               Conread position:
               2-671
               

               Cow position:
               
               

               Alignm length:
               700
               

               Alignm identity:
               483
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 27
               

               Conread position:
               3-243
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               167
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               119, 21
               

               Conread position:
               3-343
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               235
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               104, 94
               

               Conread position:
               3-383
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               139, 252
               

               Conread position:
               3-422
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 94
               

               Conread position:
               3-469
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 52
               

               Conread position:
               4-374
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               270
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               101, 93
               

               Conread position:
               4-429
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               306
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               143, 58
               

               Conread position:
               4-460
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 28
               

               Conread position:
               5-422
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 92
               

               Conread position:
               5-469
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               317
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               100, 92
               

               Conread position:
               5-469
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 92
               

               Conread position:
               5-469
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 92
               

               Conread position:
               11-422
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 86
               

               Conread position:
               17-460
               

               Cow position:
               
               

               Alignm length:
               465
               

               Alignm identity:
               306
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               126, 242
               

               Conread position:
               17-469
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 80
               

               Conread position:
               18-363
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               239
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               88, 79
               

               Conread position:
               18-364
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               240
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               88, 79
               

               Conread position:
               18-422
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               284
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               88, 79
               

               Conread position:
               18-422
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               288
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               87, 79
               

               Conread position:
               18-422
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 79
               

               Conread position:
               18-422
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 79
               

               Conread position:
               18-422
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 79
               

               Conread position:
               18-422
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 79
               

               Conread position:
               18-422
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 79
               

               Conread position:
               18-422
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               284
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               89, 79
               

               Conread position:
               18-422
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 79
               

               Conread position:
               18-422
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 79
               

               Conread position:
               18-422
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 359
               

               Conread position:
               18-422
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 79
               

               Conread position:
               18-422
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 79
               

               Conread position:
               18-422
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 359
               

               Conread position:
               18-457
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               130, 241
               

               Conread position:
               18-469
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 29
               

               Conread position:
               18-469
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               321
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               37, 25
               

               Conread position:
               18-469
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               315
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               81, 86
               

               Conread position:
               18-469
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 79
               

               Conread position:
               18-469
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               315
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               129, 241
               

               Conread position:
               18-660
               

               Cow position:
               
               

               Alignm length:
               682
               

               Alignm identity:
               452
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 79
               

               Conread position:
               18-660
               

               Cow position:
               
               

               Alignm length:
               690
               

               Alignm identity:
               452
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 359
               

               Conread position:
               18-660
               

               Cow position:
               
               

               Alignm length:
               690
               

               Alignm identity:
               452
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 79
               

               Conread position:
               18-671
               

               Cow position:
               
               

               Alignm length:
               698
               

               Alignm identity:
               456
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               130, 325
               

               Conread position:
               18-671
               

               Cow position:
               
               

               Alignm length:
               695
               

               Alignm identity:
               457
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 359
               

               Conread position:
               18-671
               

               Cow position:
               
               

               Alignm length:
               701
               

               Alignm identity:
               454
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 25
               

               Conread position:
               18-671
               

               Cow position:
               
               

               Alignm length:
               695
               

               Alignm identity:
               458
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 105
               

               Conread position:
               21-390
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               270
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               127, 64
               

               Conread position:
               23-663
               

               Cow position:
               
               

               Alignm length:
               685
               

               Alignm identity:
               456
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 216
               

               Conread position:
               24-422
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               278
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               82, 73
               

               Conread position:
               30-596
               

               Cow position:
               
               

               Alignm length:
               595
               

               Alignm identity:
               399
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 241
               

               Conread position:
               35-332
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               224
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               112, 207
               

               Conread position:
               35-437
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               293
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               50, 56
               

               Conread position:
               35-671
               

               Cow position:
               
               

               Alignm length:
               683
               

               Alignm identity:
               455
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 62
               

               Conread position:
               36-416
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               260
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               49, 55
               

               Conread position:
               45-422
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               267
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               60, 52
               

               Conread position:
               62-670
               

               Cow position:
               
               

               Alignm length:
               644
               

               Alignm identity:
               433
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 42
               

               Conread position:
               66-416
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               239
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               33, 17
               

               Conread position:
               67-279
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               80, 183
               

               Conread position:
               78-669
               

               Cow position:
               
               

               Alignm length:
               603
               

               Alignm identity:
               401
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 89
               

               Conread position:
               158-399
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               100, 83
               

               Conread position:
               158-414
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               180
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               31, 84
               

               Conread position:
               158-421
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               185
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               30, 68
               

               Conread position:
               158-422
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               189
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               22, 86
               

               Conread position:
               158-422
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               189
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               30, 204
               

               Conread position:
               158-469
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 86
               

               Conread position:
               158-660
               

               Cow position:
               
               

               Alignm length:
               537
               

               Alignm identity:
               354
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               30, 86
               

               Conread position:
               158-671
               

               Cow position:
               
               

               Alignm length:
               547
               

               Alignm identity:
               374
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 64
               

               Conread position:
               160-388
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               161
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               24, 93
               

               Conread position:
               160-460
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               219
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               19, 73
               

               Conread position:
               160-469
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               28, 84
               

               Conread position:
               163-427
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               193
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               223, 38
               

               Conread position:
               172-422
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               164, 11
               
Show alignments to all cow chromosomes.